Cc_v2.0_09867.1

Transcript Overview


Name	Cc_v2.0_09867.1
Unique Name	drCajCajn.Asha.2.0.Cc_v2.0_09867.1
Type	mRNA
Organism	Cajanus cajan (pigeon pea)
Sequence length	489

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
CcLG04_v2.0	chromosome	CcLG04_v2.0:14601001..14601489 -	Cajanus cajan cv. Asha genome v2.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cajanus cajan cv. Asha genome v2.0	2024-06-26
Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL	2024-07-30
InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0	2024-07-30
Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot	2024-07-30
Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11	2024-07-30

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ccapsR423	Pisum sativum Cameor genome v1a	Pisum sativum
ccapsR442	Pisum sativum Cameor genome v1a	Pisum sativum
ccapsR451	Pisum sativum Cameor genome v1a	Pisum sativum
ccavrvR396	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccapvR445	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccapvR449	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccavfhR449	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccapvR466	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccapvR482	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccavssR413	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccavssR428	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccavuR371	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
ccavumR476	Vigna umbellata FF25 genome v1.0	Vigna umbellata
ccavumR484	Vigna umbellata FF25 genome v1.0	Vigna umbellata
ccavuR387	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
ccccaL1163	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccavunR319	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
ccapvfR455	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
ccapvfR465	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
ccapvfR487	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
Psat7g164480.1	Pisum sativum Cameor genome v1a	Pisum sativum
jg8527.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vum_06G00733.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Vfaba.Hedin2.R1.6g072840.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Vigun11g084200.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
Vigun11g084200.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
PvulFLAVERTChr11.795	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
rna-XM_014637889.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Cc_v2.0_09867	drCajCajn.Asha.2.0.Cc_v2.0_09867	Cajanus cajan	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds.Cc_v2.0_09867.1	drCajCajn.Asha.2.0.cds.Cc_v2.0_09867.1	Cajanus cajan	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cc_v2.0_09867.1.exon1	drCajCajn.Asha.2.0.Cc_v2.0_09867.1.exon1	Cajanus cajan	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drCajCajn.Asha.2.0.Cc_v2.0_09867.1	drCajCajn.Asha.2.0.Cc_v2.0_09867.1	Cajanus cajan	polypeptide
drCajCajn.Asha.2.0.Cc_v2.0_09867.1	drCajCajn.Asha.2.0.Cc_v2.0_09867.1-protein	Cajanus cajan	polypeptide

Homology

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7AIX4|V7AIX4_PHAVU (Cysteine proteinase OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G126700g PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.381e-61
Identity = 97/117 (82.91%), Postives = 106/117 (90.60%), Query Frame = 0

Query:    2 ASSQKQYMLALFLVLAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTTSFKYENV 118
            +++QKQY+LALFL+LAVGIS VMSRKLHETS+RERHE WM EYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVG+K Y +GVNH ADLTV+EFKASRNG KRP E S TT FKYENV
Sbjct:    3 STTQKQYILALFLLLAVGISQVMSRKLHETSLRERHENWMQEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGNKPYKLGVNHFADLTVQEFKASRNGFKRPHEFS-TTPFKYENV 118

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445HPY9|A0A445HPY9_GLYSO (Senescence-specific cysteine protease SAG39 OS=Glycine soja OX=3848 GN=D0Y65_034223 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 8.234e-61
Identity = 98/116 (84.48%), Postives = 105/116 (90.52%), Query Frame = 0

Query:    3 SSQKQYMLALFLVLAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTTSFKYENV 118
            +SQKQY +ALFL+LA+GI  +MSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFK NVEFIESFNA  +K Y +GVNHLADLTVEEFKASRNGLKRP ELS TT FKYENV
Sbjct:    4 TSQKQYTIALFLLLALGIPQMMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKHNVEFIESFNAAANKPYKLGVNHLADLTVEEFKASRNGLKRPYELS-TTPFKYENV 118

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0R0H5F5|A0A0R0H5F5_SOYBN (Cysteine proteinase OS=Glycine max OX=3847 GN=100818606 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 8.234e-61
Identity = 98/116 (84.48%), Postives = 105/116 (90.52%), Query Frame = 0

Query:    3 SSQKQYMLALFLVLAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTTSFKYENV 118
            +SQKQY +ALFL+LA+GI  +MSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFK NVEFIESFNA  +K Y +GVNHLADLTVEEFKASRNGLKRP ELS TT FKYENV
Sbjct:    4 TSQKQYTIALFLLLALGIPQMMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKHNVEFIESFNAAANKPYKLGVNHLADLTVEEFKASRNGLKRPYELS-TTPFKYENV 118

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2R7R1|A0A0B2R7R1_GLYSO (Thiol protease SEN102 OS=Glycine soja OX=3848 GN=glysoja_036023 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.023e-61
Identity = 98/116 (84.48%), Postives = 105/116 (90.52%), Query Frame = 0

Query:    3 SSQKQYMLALFLVLAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTTSFKYENV 118
            +SQKQY +ALFL+LA+GI  +MSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFK NVEFIESFNA  +K Y +GVNHLADLTVEEFKASRNGLKRP ELS TT FKYENV
Sbjct:    4 TSQKQYTIALFLLLALGIPQMMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKHNVEFIESFNAAANKPYKLGVNHLADLTVEEFKASRNGLKRPYELS-TTPFKYENV 118

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0KDS0|A0A8T0KDS0_PHAAN (Senescence-specific cysteine protease OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0245860 PE=4 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 9.838e-60
Identity = 94/117 (80.34%), Postives = 101/117 (86.32%), Query Frame = 0

Query:    2 ASSQKQYMLALFLVLAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTTSFKYENV 118
            +SSQKQY+LALFL+ AVGIS VMSRKLHETS+RERHEQWM +Y KVYKDAAEKEKRF IFKDNVEFIESFNA  +K Y +GVNH ADLTVEEFK  RNGLKRP E S TT FKYENV
Sbjct:    3 SSSQKQYVLALFLLFAVGISQVMSRKLHETSLRERHEQWMQDYNKVYKDAAEKEKRFQIFKDNVEFIESFNAAANKPYKLGVNHFADLTVEEFKTFRNGLKRPHEFS-TTPFKYENV 118

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9V4X6|A0A0L9V4X6_PHAAN (Cysteine proteinase OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g083900 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.247e-57
Identity = 94/117 (80.34%), Postives = 101/117 (86.32%), Query Frame = 0

Query:    2 ASSQKQYMLALFLVLAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTTSFKYENV 118
            +SSQKQY+LALFL+ AVGIS VMSRKLHETS+RERHEQWM +Y KVYKDAAEKEKRF IFKDNVEFIESFNA  +K Y +GVNH ADLTVEEFK  RNGLKRP E S TT FKYENV
Sbjct:    3 SSSQKQYVLALFLLFAVGISQVMSRKLHETSLRERHEQWMQDYNKVYKDAAEKEKRFQIFKDNVEFIESFNAAANKPYKLGVNHFADLTVEEFKTFRNGLKRPHEFS-TTPFKYENV 118

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KRW8|A0A8B8KRW8_ABRPR (Ervatamin-B-like OS=Abrus precatorius OX=3816 GN=LOC113858264 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.762e-57
Identity = 92/119 (77.31%), Postives = 106/119 (89.08%), Query Frame = 0

Query:    1 MASS-QKQYMLALFLVLAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTTSFKYENV 118
            MAS+ QK  +LALF +LA+GIS VMSRKLHETS+RERHEQWM +YGKVYKDA EKEKR+LIFKDNVEFIE+FNA GDK Y +G+NHLADLT++EFKA+RNGLKRP +LS TT FKYENV
Sbjct:    1 MASTNQKHCVLALFFLLAIGISQVMSRKLHETSLRERHEQWMTQYGKVYKDAMEKEKRYLIFKDNVEFIEAFNANGDKSYKLGINHLADLTIQEFKAARNGLKRPLQLSATT-FKYENV 118

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445KF56|A0A445KF56_GLYSO (Senescence-specific cysteine protease SAG39 OS=Glycine soja OX=3848 GN=D0Y65_015975 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.509e-56
Identity = 93/120 (77.50%), Postives = 102/120 (85.00%), Query Frame = 0

Query:    3 SSQKQYMLALFLVLAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTT----SFKYENV 118
            + QKQ+MLALFL LAVGIS VM RKLH+TS+RERHE WMAEYGK+YKDAAEKEKRF IFKDNVEFI+SFNA G+K Y +GVNHLADLT+EEFK SRNGLKR  E STTT     FKYENV
Sbjct:    4 TGQKQHMLALFLFLAVGISQVMPRKLHQTSLRERHENWMAEYGKMYKDAAEKEKRFQIFKDNVEFIQSFNAAGNKPYKLGVNHLADLTLEEFKDSRNGLKRTHEFSTTTFKLNGFKYENV 123

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2PX51|A0A0B2PX51_GLYSO (Thiol protease OS=Glycine soja OX=3848 GN=glysoja_050135 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.377e-56
Identity = 93/120 (77.50%), Postives = 102/120 (85.00%), Query Frame = 0

Query:    3 SSQKQYMLALFLVLAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTT----SFKYENV 118
            + QKQ+MLALFL LAVGIS VM RKLH+T++RERHE WMAEYGK+YKDAAEKEKRF IFKDNVEFIESFNA G+K Y +GVNHLADLT+EEFK SRNGLKR  E STTT     FKYENV
Sbjct:    4 TGQKQHMLALFLFLAVGISQVMPRKLHQTALRERHENWMAEYGKMYKDAAEKEKRFQIFKDNVEFIESFNAAGNKPYKLGVNHLADLTLEEFKDSRNGLKRTYEFSTTTFKLNGFKYENV 123

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445KF77|A0A445KF77_GLYSO (Senescence-specific cysteine protease SAG39 OS=Glycine soja OX=3848 GN=D0Y65_015968 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.750e-56
Identity = 93/120 (77.50%), Postives = 102/120 (85.00%), Query Frame = 0

Query:    3 SSQKQYMLALFLVLAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTT----SFKYENV 118
            + QKQ+MLALFL LAVGIS VM RKLH+T++RERHE WMAEYGK+YKDAAEKEKRF IFKDNVEFIESFNA G+K Y +GVNHLADLT+EEFK SRNGLKR  E STTT     FKYENV
Sbjct:    4 TGQKQHMLALFLFLAVGISQVMPRKLHQTALRERHENWMAEYGKMYKDAAEKEKRFQIFKDNVEFIESFNAAGNKPYKLGVNHLADLTLEEFKDSRNGLKRTYEFSTTTFKLNGFKYENV 123

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|A2XQE8|SAG39_ORYSI (Senescence-specific cysteine protease SAG39 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_14861 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.155e-23
Identity = 51/115 (44.35%), Postives = 74/115 (64.35%), Query Frame = 0

Query:    6 KQYMLALFLVLAVGISNVMSRKL-HETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASR-NGLKRPRELSTTTSFKYENV 118
            K  + A+   L +  + + +R+L  + +M  RHE+WMA+YG+VY+D AEK +RF +FK NV FIESFNA G+  + +GVN  ADLT +EF+ ++ N    P      T F+YENV
Sbjct:    5 KALLFAILGCLCLCSAVLAARELSDDAAMAARHERWMAQYGRVYRDDAEKARRFEVFKANVAFIESFNA-GNHNFWLGVNQFADLTNDEFRWTKTNKGFIPSTTRVPTGFRYENV 118

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q7XWK5|SAG39_ORYSJ (Senescence-specific cysteine protease SAG39 OS=Oryza sativa subsp. japonica OX=39947 GN=SAG39 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 2.559e-22
Identity = 51/115 (44.35%), Postives = 73/115 (63.48%), Query Frame = 0

Query:    6 KQYMLALFLVLAVGISNVMSRKL-HETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASR-NGLKRPRELSTTTSFKYENV 118
            K  + A+   L +  + + +R+L  + +M  RHE+WMA+YG+VY+D AEK +RF +FK NV FIESFNA G+  + +GVN  ADLT +EF+  + N    P      T F+YENV
Sbjct:    5 KALLFAILGCLCLCSAVLAARELSDDAAMAARHERWMAQYGRVYRDDAEKARRFEVFKANVAFIESFNA-GNHNFWLGVNQFADLTNDEFRWMKTNKGFIPSTTRVPTGFRYENV 118

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O23791|BROM1_ANACO (Fruit bromelain OS=Ananas comosus OX=4615 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.552e-21
Identity = 47/118 (39.83%), Postives = 66/118 (55.93%), Query Frame = 0

Query:    1 MASSQKQYMLALFLVLAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTTSFKYENV 118
            MAS  +   L LFL       +  SR      M +R E+WMAEYG+VYKD  EK +RF IFK+NV+ IE+FN+  +  YT+G+N   D+T  EF A   G+  P  +       +++V
Sbjct:    1 MASKVQLVFLFLFLCAMWASPSAASRDEPNDPMMKRFEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPLNIEREPVVSFDDV 118

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P80884|ANAN_ANACO (Ananain OS=Ananas comosus OX=4615 GN=AN1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.569e-19
Identity = 46/117 (39.32%), Postives = 65/117 (55.56%), Query Frame = 0

Query:    4 SQKQYMLALFLVLAVGISNVMSRKLHETS--MRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTTSFKYENV 118
            + K  ++ LFL L V  ++  +    E S  M ++ E+WMAEYG+VYKD  EK  RF IFK+NV  IE+FN      YT+G+N   D+T  EF A   GL  P  +       +++V
Sbjct:    2 TSKVQLVFLFLFLCVMWASPSAASCDEPSDPMMKQFEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPLNIKREPVVSFDDV 118

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FJ47|SAG12_ARATH (Senescence-specific cysteine protease SAG12 OS=Arabidopsis thaliana OX=3702 GN=SAG12 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 6.132e-18
Identity = 46/130 (35.38%), Postives = 74/130 (56.92%), Query Frame = 0

Query:    1 MASSQKQYMLALFLVLAVGISNVMSRKL-HETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAV-GDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTT-----TSFKYENVMGGRL 123
            MA    Q  L + +  +   S  +SR L +E  M++RH +WM ++G+VY D  E+  R+++FK+NVE IE  N++   + + + VN  ADLT +EF++   G K    LS+      + F+Y+NV  G L
Sbjct:    1 MALKHMQIFLFVAIFSSFCFSITLSRPLDNELIMQKRHIEWMTKHGRVYADVKEENNRYVVFKNNVERIEHLNSIPAGRTFKLAVNQFADLTNDEFRSMYTGFKGVSALSSQSQTKMSPFRYQNVSSGAL 130

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LT77|RDL2_ARATH (Probable cysteine protease RDL2 OS=Arabidopsis thaliana OX=3702 GN=RDL2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.556e-15
Identity = 38/100 (38.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query:   19 GISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKAS--RNGLKRPRELSTTTSFKYE 116
            G++     + +ET +R  +EQW+ E  K Y    EKE+RF IFKDN++F++  N+V D+ + VG+   ADLT EEF+A   R  ++R ++   T  + Y+
Sbjct:   26 GVATETEIERNETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKTERYLYK 125

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LT78|RD21C_ARATH (Probable cysteine protease RD21C OS=Arabidopsis thaliana OX=3702 GN=RD21C PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.221e-14
Identity = 41/113 (36.28%), Postives = 64/113 (56.64%), Query Frame = 0

Query:    1 MASSQKQYMLALFLV------LAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKAS--RNGLKRPR 105
            MA+S K   LAL +       L++G         +E   R  +E+W+ E  K Y    EKE+RF IFKDN++F+E  +++ ++ Y VG+   ADLT +EF+A   R+ ++R R
Sbjct:    1 MATSIKSITLALLIFSVLLISLSLGSVTATETTRNEAEARRMYERWLVENRKNYNGLGEKERRFEIFKDNLKFVEEHSSIPNRTYEVGLTRFADLTNDEFRAIYLRSKMERTR 113

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LXW3|RDL3_ARATH (Probable cysteine protease RDL3 OS=Arabidopsis thaliana OX=3702 GN=RDL3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.645e-13
Identity = 35/103 (33.98%), Postives = 61/103 (59.22%), Query Frame = 0

Query:   14 LVLAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTTSFKYE 116
            + +++G+      + +E  +   +EQW+ E GK Y    EKE+RF IFKDN++ IE  N+  ++ Y  G+N  +DLT +EF+AS  G K  ++  +  + +Y+
Sbjct:   18 ISISLGVVTATESQRNEGEVLTMYEQWLVENGKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLSDVAERYQ 120

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|A5HII1|ACTN_ACTDE (Actinidain OS=Actinidia deliciosa OX=3627 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.728e-13
Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 0

Query:   12 LFLVLAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTTSFKYENVMG 120
            L L LA    N+  R   E  ++  +E W+ +YGK Y    E E+RF IFK+ + FI+  NA  ++ Y VG+N  ADLT EEF+++  G        T  S +YE  +G
Sbjct:   19 LILSLAFNAKNLTQRTNDE--VKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSN-KTKVSNRYEPRVG 124

[Close]

BLAST of Cc_v2.0_09867.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P00785|ACTN_ACTCC (Actinidain OS=Actinidia chinensis var. chinensis OX=1590841 GN=ACT1A PE=1 SV=5)

HSP 1 Score: 69.3218 bits (168), Expect = 3.448e-13
Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 0

Query:   12 LFLVLAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTTSFKYENVMG 120
            L L LA    N+  R   E  ++  +E W+ +YGK Y    E E+RF IFK+ + FI+  NA  ++ Y VG+N  ADLT EEF+++  G        T  S +YE  +G
Sbjct:   19 LILSLAFNAKNLTQRTNDE--VKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSN-KTKVSNQYEPRVG 124

[Close]

BLAST of Cc_v2.0_09867.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:18293347-18294577 REVERSE LENGTH=341)

HSP 1 Score: 93.9745 bits (232), Expect = 2.941e-23
Identity = 52/116 (44.83%), Postives = 70/116 (60.34%), Query Frame = 0

Query:   12 LFLVLAVGISNVMSRK-LHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELS--------TTTSFKYENV 118
            L ++L+   S V SR  L E S  E+HEQWM+ + +VY D +EK  RF IF +N++F+ES N   +K YT+ VN  +DLT EEFKA   GL  P  ++         T SF+YENV
Sbjct:    9 LAILLSSRTSGVTSRGGLFEASAVEKHEQWMSRFNRVYSDDSEKTSRFEIFTNNLKFVESINMNTNKTYTLDVNEFSDLTDEEFKARYTGLVVPEGMTRISTTDSHETVSFRYENV 124

[Close]

BLAST of Cc_v2.0_09867.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:10163103-10164385 REVERSE LENGTH=355)

HSP 1 Score: 88.5817 bits (218), Expect = 3.256e-21
Identity = 44/98 (44.90%), Postives = 60/98 (61.22%), Query Frame = 0

Query:    8 YMLALFLVLAVG--ISNVMSR-KLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLK 102
            +ML    +L++   +S   SR   HE  + E H+QWM  + +VY D  EK+ RF +FK N++FIE FN  GD+ Y +GVN  AD T EEF A+  GLK
Sbjct:   15 FMLVSLTILSMNLKVSQATSRVTFHEPIVAEHHQQWMTRFSRVYSDELEKQMRFDVFKKNLKFIEKFNKKGDRTYKLGVNEFADWTREEFIATHTGLK 112

[Close]

BLAST of Cc_v2.0_09867.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:11726311-11727519 REVERSE LENGTH=348)

HSP 1 Score: 87.8113 bits (216), Expect = 6.085e-21
Identity = 48/121 (39.67%), Postives = 67/121 (55.37%), Query Frame = 0

Query:    8 YMLALFLVLAVGISNVMSR-KLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELS---------TTTSFKYENV 118
            ++L +FL     ++   SR  L E S  E+HEQWMA + +VY D  EK  RF IFK N+EF+++FN      Y V +N  +DLT EEF+A+  GL  P  ++          T  F+Y NV
Sbjct:    7 FILTIFLSYRTSLAT--SRGSLFEASAIEKHEQWMARFNRVYSDETEKRNRFNIFKKNLEFVQNFNMNNKITYKVDINEFSDLTDEEFRATHTGLVVPEAITRISTLSSGKNTVPFRYGNV 125

[Close]

BLAST of Cc_v2.0_09867.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:14393431-14394777 REVERSE LENGTH=345)

HSP 1 Score: 85.5001 bits (210), Expect = 4.557e-20
Identity = 46/106 (43.40%), Postives = 65/106 (61.32%), Query Frame = 0

Query:    9 MLALFLVLAVG--ISNVMSRKL--HETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTT 110
            ++ + ++L  G  IS   SR +   E SM ++HEQWMA + + Y+D  EK  R  +FK N++FIE+FN  G+K Y +GVN  AD T EEF A   GLK   E+S +
Sbjct:    7 LVTVLIILFTGFRISQATSRTVIFREQSMVDKHEQWMARFSREYRDELEKNMRRDVFKKNLKFIENFNKKGNKSYKLGVNEFADWTNEEFLAIHTGLKGLTEVSPS 112

[Close]

BLAST of Cc_v2.0_09867.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:10171683-10173071 FORWARD LENGTH=334)

HSP 1 Score: 84.3445 bits (207), Expect = 8.630e-20
Identity = 41/103 (39.81%), Postives = 64/103 (62.14%), Query Frame = 0

Query:    1 MASSQKQYMLALFLVLAVGISNVMSR-KLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLK 102
            M S +  ++    L + + IS       L+E S+ + H+QWM ++ +VYKD +EKE R  +FK N++FIE+FN +G++ YT+GVN   D   EEF A+  GL+
Sbjct:    1 MVSVRSVFVALTILSMDLRISQARPHVTLNEQSIVDYHQQWMTQFSRVYKDESEKEMRLKVFKKNLKFIENFNNMGNQSYTLGVNEFTDWKTEEFLATHTGLR 103

[Close]

BLAST of Cc_v2.0_09867.1 vs. Araport11
Match: | (Symbols: SAG12, AtSAG12 | senescence-associated gene 12 | chr5:18613300-18614759 FORWARD LENGTH=346)

HSP 1 Score: 82.4185 bits (202), Expect = 6.248e-19
Identity = 46/130 (35.38%), Postives = 74/130 (56.92%), Query Frame = 0

Query:    1 MASSQKQYMLALFLVLAVGISNVMSRKL-HETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAV-GDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTT-----TSFKYENVMGGRL 123
            MA    Q  L + +  +   S  +SR L +E  M++RH +WM ++G+VY D  E+  R+++FK+NVE IE  N++   + + + VN  ADLT +EF++   G K    LS+      + F+Y+NV  G L
Sbjct:    1 MALKHMQIFLFVAIFSSFCFSITLSRPLDNELIMQKRHIEWMTKHGRVYADVKEENNRYVVFKNNVERIEHLNSIPAGRTFKLAVNQFADLTNDEFRSMYTGFKGVSALSSQSQTKMSPFRYQNVSSGAL 130

[Close]

BLAST of Cc_v2.0_09867.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:10157494-10158674 REVERSE LENGTH=346)

HSP 1 Score: 74.7146 bits (182), Expect = 2.937e-16
Identity = 45/130 (34.62%), Postives = 72/130 (55.38%), Query Frame = 0

Query:    9 MLALFLVLAVGISNVMSRK--LHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNGLKRPRELSTTTSFKYENVMGGRLMKTRIASRWCPCD 136
            +L +F  + + IS   SR      +S+ + H+QWM ++ +VY D  EK+ R  +  +N++FIESFN +G++ Y +GVN   D T EEF A+  GL   R ++ T+ F+  N       +T+ A  W   D
Sbjct:   10 VLTIFF-MDLKISEATSRVALYKPSSIVDYHQQWMIQFSRVYDDEFEKQLRLQVLTENLKFIESFNNMGNQSYKLGVNEFTDWTKEEFLATYTGL---RGVNVTSPFEVVN-------ETKPAWNWTVSD 128

[Close]

BLAST of Cc_v2.0_09867.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:6725510-6726557 FORWARD LENGTH=290)

HSP 1 Score: 73.559 bits (179), Expect = 5.596e-16
Identity = 38/99 (38.38%), Postives = 60/99 (60.61%), Query Frame = 0

Query:   19 GISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKAS--RNGLKRPRELSTTTSFKY 115
            G++     + +ET +R  +EQW+ E  K Y    EKE+RF IFKDN++F++  N+V D+ + VG+   ADLT EEF+A   R  ++R ++   T  + Y
Sbjct:   26 GVATETEIERNETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKTERYLY 124

[Close]

BLAST of Cc_v2.0_09867.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:6725510-6726878 FORWARD LENGTH=362)

HSP 1 Score: 73.559 bits (179), Expect = 8.687e-16
Identity = 38/100 (38.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query:   19 GISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKAS--RNGLKRPRELSTTTSFKYE 116
            G++     + +ET +R  +EQW+ E  K Y    EKE+RF IFKDN++F++  N+V D+ + VG+   ADLT EEF+A   R  ++R ++   T  + Y+
Sbjct:   26 GVATETEIERNETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKTERYLYK 125

[Close]

BLAST of Cc_v2.0_09867.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:6723024-6724768 FORWARD LENGTH=452)

HSP 1 Score: 73.559 bits (179), Expect = 1.236e-15
Identity = 41/113 (36.28%), Postives = 64/113 (56.64%), Query Frame = 0

Query:    1 MASSQKQYMLALFLV------LAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKAS--RNGLKRPR 105
            MA+S K   LAL +       L++G         +E   R  +E+W+ E  K Y    EKE+RF IFKDN++F+E  +++ ++ Y VG+   ADLT +EF+A   R+ ++R R
Sbjct:    1 MATSIKSITLALLIFSVLLISLSLGSVTATETTRNEAEARRMYERWLVENRKNYNGLGEKERRFEIFKDNLKFVEEHSSIPNRTYEVGLTRFADLTNDEFRAIYLRSKMERTR 113

The following BLAST results are available for this feature:

BLAST of Cc_v2.0_09867.1 vs. ExPASy TrEMBL (2024)
BLAST of Cc_v2.0_09867.1 vs. ExPASy Swiss-Prot (2024)
BLAST of Cc_v2.0_09867.1 vs. Araport11

BLAST of Cc_v2.0_09867.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|V7AIX4\|V7AIX4_PHAVU	1.381e-61	82.91	Cysteine proteinase OS=Phaseolus vulgaris OX=3885 ...	[more]
tr\|A0A445HPY9\|A0A445HPY9_GLYSO	8.234e-61	84.48	Senescence-specific cysteine protease SAG39 OS=Gly...	[more]
tr\|A0A0R0H5F5\|A0A0R0H5F5_SOYBN	8.234e-61	84.48	Cysteine proteinase OS=Glycine max OX=3847 GN=1008...	[more]
tr\|A0A0B2R7R1\|A0A0B2R7R1_GLYSO	9.023e-61	84.48	Thiol protease SEN102 OS=Glycine soja OX=3848 GN=g...	[more]
tr\|A0A8T0KDS0\|A0A8T0KDS0_PHAAN	9.838e-60	80.34	Senescence-specific cysteine protease OS=Phaseolus...	[more]
tr\|A0A0L9V4X6\|A0A0L9V4X6_PHAAN	1.247e-57	80.34	Cysteine proteinase OS=Phaseolus angularis OX=3914...	[more]
tr\|A0A8B8KRW8\|A0A8B8KRW8_ABRPR	3.762e-57	77.31	Ervatamin-B-like OS=Abrus precatorius OX=3816 GN=L...	[more]
tr\|A0A445KF56\|A0A445KF56_GLYSO	1.509e-56	77.50	Senescence-specific cysteine protease SAG39 OS=Gly...	[more]
tr\|A0A0B2PX51\|A0A0B2PX51_GLYSO	2.377e-56	77.50	Thiol protease OS=Glycine soja OX=3848 GN=glysoja_...	[more]
tr\|A0A445KF77\|A0A445KF77_GLYSO	2.750e-56	77.50	Senescence-specific cysteine protease SAG39 OS=Gly...	[more]

BLAST of Cc_v2.0_09867.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 10


Match Name	E-value	Identity	Description
sp\|A2XQE8\|SAG39_ORYSI	8.155e-23	44.35	Senescence-specific cysteine protease SAG39 OS=Ory...	[more]
sp\|Q7XWK5\|SAG39_ORYSJ	2.559e-22	44.35	Senescence-specific cysteine protease SAG39 OS=Ory...	[more]
sp\|O23791\|BROM1_ANACO	2.552e-21	39.83	Fruit bromelain OS=Ananas comosus OX=4615 PE=1 SV=...	[more]
sp\|P80884\|ANAN_ANACO	6.569e-19	39.32	Ananain OS=Ananas comosus OX=4615 GN=AN1 PE=1 SV=2	[more]
sp\|Q9FJ47\|SAG12_ARATH	6.132e-18	35.38	Senescence-specific cysteine protease SAG12 OS=Ara...	[more]
sp\|Q9LT77\|RDL2_ARATH	8.556e-15	38.00	Probable cysteine protease RDL2 OS=Arabidopsis tha...	[more]
sp\|Q9LT78\|RD21C_ARATH	1.221e-14	36.28	Probable cysteine protease RD21C OS=Arabidopsis th...	[more]
sp\|Q9LXW3\|RDL3_ARATH	2.645e-13	33.98	Probable cysteine protease RDL3 OS=Arabidopsis tha...	[more]
sp\|A5HII1\|ACTN_ACTDE	2.728e-13	37.61	Actinidain OS=Actinidia deliciosa OX=3627 PE=1 SV=...	[more]
sp\|P00785\|ACTN_ACTCC	3.448e-13	37.61	Actinidain OS=Actinidia chinensis var. chinensis O...	[more]

BLAST of Cc_v2.0_09867.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 10


Match Name	E-value	Identity	Description
\|	2.941e-23	44.83	Symbols: no symbol available \| no full name availa...	[more]
\|	3.256e-21	44.90	Symbols: no symbol available \| no full name availa...	[more]
\|	6.085e-21	39.67	Symbols: no symbol available \| no full name availa...	[more]
\|	4.557e-20	43.40	Symbols: no symbol available \| no full name availa...	[more]
\|	8.630e-20	39.81	Symbols: no symbol available \| no full name availa...	[more]
\|	6.248e-19	35.38	Symbols: SAG12, AtSAG12 \| senescence-associated ge...	[more]
\|	2.937e-16	34.62	Symbols: no symbol available \| no full name availa...	[more]
\|	5.596e-16	38.38	Symbols: no symbol available \| no full name availa...	[more]
\|	8.687e-16	38.00	Symbols: no symbol available \| no full name availa...	[more]
\|	1.236e-15	36.28	Symbols: no symbol available \| no full name availa...	[more]

InterPro

Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.287.2250		coord: 21..103 e-value: 4.6E-24 score: 86.2
IPR013201	Cathepsin propeptide inhibitor domain (I29)	PFAM	PF08246	Inhibitor_I29	coord: 37..94 e-value: 6.6E-17 score: 72.9
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 29..119

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at CcLG04_v2.0:14601001..14601489-
coding sequence from alignment at CcLG04_v2.0:14601001..14601489-

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_09867.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09867.1; Name=Cc_v2.0_09867.1; organism=Cajanus cajan; type=mRNA; length=489bp
ATGGCTTCCTCCCAAAAACAGTATATGTTAGCTCTTTTCCTCGTCCTTGC
AGTTGGGATTTCCAATGTGATGTCCCGCAAGCTGCATGAGACATCCATGC
GAGAAAGACACGAGCAATGGATGGCAGAATATGGCAAAGTGTACAAGGAT
GCTGCAGAGAAGGAAAAACGTTTCCTGATATTCAAGGACAACGTGGAGTT
CATTGAATCATTCAATGCTGTTGGTGACAAACTTTACACGGTTGGCGTTA
ATCACCTTGCTGACCTTACAGTTGAGGAATTCAAGGCTTCCCGTAATGGA
CTCAAGAGGCCCCGTGAGCTTAGCACAACAACATCATTTAAGTATGAAAA
TGTTATGGGAGGACGTctgatgaagacgaggattgctagtaggtggtgcc
cttgtgatggtgggcaaaggagtaaatgggtgacctatgagtattgtgat
gcctctccaggcgcaatgttgagttcttttgatgattga

protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_09867.1

>drCajCajn.Asha.2.0.Cc_v2.0_09867.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09867.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_09867.1; organism=Cajanus cajan; type=polypeptide; length=162bp
MASSQKQYMLALFLVLAVGISNVMSRKLHETSMRERHEQWMAEYGKVYKD
AAEKEKRFLIFKDNVEFIESFNAVGDKLYTVGVNHLADLTVEEFKASRNG
LKRPRELSTTTSFKYENVMGGRLMKTRIASRWCPCDGGQRSKWVTYEYCD
ASPGAMLSSFDD

mRNA from alignment at CcLG04_v2.0:14601001..14601489-

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>drCajCajn.Asha.2.0.Cc_v2.0_09867.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09867.1; Name=Cc_v2.0_09867.1; organism=Cajanus cajan; type=mRNA; length=489bp; location=Sequence derived from: CcLG04_v2.0:14601001..14601489- (Cajanus cajan
ATGGCTTCCTCCCAAAAACAGTATATGTTAGCTCTTTTCCTCGTCCTTGC
AGTTGGGATTTCCAATGTGATGTCCCGCAAGCTGCATGAGACATCCATGC
GAGAAAGACACGAGCAATGGATGGCAGAATATGGCAAAGTGTACAAGGAT
GCTGCAGAGAAGGAAAAACGTTTCCTGATATTCAAGGACAACGTGGAGTT
CATTGAATCATTCAATGCTGTTGGTGACAAACTTTACACGGTTGGCGTTA
ATCACCTTGCTGACCTTACAGTTGAGGAATTCAAGGCTTCCCGTAATGGA
CTCAAGAGGCCCCGTGAGCTTAGCACAACAACATCATTTAAGTATGAAAA
TGTTATGGGAGGACGTCTGATGAAGACGAGGATTGCTAGTAGGTGGTGCC
CTTGTGATGGTGGGCAAAGGAGTAAATGGGTGACCTATGAGTATTGTGAT
GCCTCTCCAGGCGCAATGTTGAGTTCTTTTGATGATTGA

Coding sequence (CDS) from alignment at CcLG04_v2.0:14601001..14601489-

>drCajCajn.Asha.2.0.Cc_v2.0_09867.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09867.1; Name=Cc_v2.0_09867.1; organism=Cajanus cajan; type=CDS; length=489bp; location=Sequence derived from: CcLG04_v2.0:14601001..14601489- (Cajanus cajan
ATGGCTTCCTCCCAAAAACAGTATATGTTAGCTCTTTTCCTCGTCCTTGC
AGTTGGGATTTCCAATGTGATGTCCCGCAAGCTGCATGAGACATCCATGC
GAGAAAGACACGAGCAATGGATGGCAGAATATGGCAAAGTGTACAAGGAT
GCTGCAGAGAAGGAAAAACGTTTCCTGATATTCAAGGACAACGTGGAGTT
CATTGAATCATTCAATGCTGTTGGTGACAAACTTTACACGGTTGGCGTTA
ATCACCTTGCTGACCTTACAGTTGAGGAATTCAAGGCTTCCCGTAATGGA
CTCAAGAGGCCCCGTGAGCTTAGCACAACAACATCATTTAAGTATGAAAA
TGTTATGGGAGGACGTCTGATGAAGACGAGGATTGCTAGTAGGTGGTGCC
CTTGTGATGGTGGGCAAAGGAGTAAATGGGTGACCTATGAGTATTGTGAT
GCCTCTCCAGGCGCAATGTTGAGTTCTTTTGATGATTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR013201	Prot_inhib_I29
IPR038765	Papain-like_cys_pep_sf

Search form

Cc_v2.0_09867.1