Cc_v2.0_10883.1

Transcript Overview
NameCc_v2.0_10883.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_10883.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length654
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG05_v2.0chromosomeCcLG05_v2.0:5577696..5579656 -Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anccaL0097Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL087Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0297Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL264Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0453Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL556Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccaL663Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0890Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL719Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0962Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL298Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR493Pisum sativum Cameor genome v1aPisum sativum
ccapsR540Pisum sativum Cameor genome v1aPisum sativum
carccaL381Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carccaL487Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavrvR432Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR441Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR457Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR483Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR469Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavfhR476Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR513Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccapvR518Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccapvR523Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR500Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR560Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
carccaL651Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavssR504Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR544Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccccaL0821Cajanus cajan Asha genome v1.0Cajanus cajan
ccavumR495Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR506Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR515Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR407Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavuR409Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR526Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR432Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavuR437Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR565Vigna umbellata FF25 genome v1.0Vigna umbellata
ccccaL1266Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL1267Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL1371Cajanus cajan Asha genome v1.0Cajanus cajan
ccavunR350Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccavunR374Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccavunR379Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR518Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR523Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR524Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR529Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR563Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_10883drCajCajn.Asha.2.0.Cc_v2.0_10883Cajanus cajangene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_10883.1drCajCajn.Asha.2.0.cds.Cc_v2.0_10883.1Cajanus cajanCDS
cds.Cc_v2.0_10883.1drCajCajn.Asha.2.0.cds.Cc_v2.0_10883.1_2Cajanus cajanCDS
cds.Cc_v2.0_10883.1drCajCajn.Asha.2.0.cds.Cc_v2.0_10883.1_3Cajanus cajanCDS
cds.Cc_v2.0_10883.1drCajCajn.Asha.2.0.cds.Cc_v2.0_10883.1_4Cajanus cajanCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_10883.1.exon4drCajCajn.Asha.2.0.Cc_v2.0_10883.1.exon4Cajanus cajanexon
Cc_v2.0_10883.1.exon3drCajCajn.Asha.2.0.Cc_v2.0_10883.1.exon3Cajanus cajanexon
Cc_v2.0_10883.1.exon2drCajCajn.Asha.2.0.Cc_v2.0_10883.1.exon2Cajanus cajanexon
Cc_v2.0_10883.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_10883.1.exon1Cajanus cajanexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_10883.1drCajCajn.Asha.2.0.Cc_v2.0_10883.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_10883.1drCajCajn.Asha.2.0.Cc_v2.0_10883.1-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_10883.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1M8E3|I1M8E3_SOYBN (Outer envelope pore protein 24, chloroplastic OS=Glycine max OX=3847 GN=100802815 PE=4 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 7.945e-134
Identity = 190/218 (87.16%), Postives = 199/218 (91.28%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVY-GDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKATLKGKYD+DKNG A A  AVNAGDVKFRAS    VTEATFINGPSLTGL+LAVEKPGSFIVDYNVPKKDFRFQFMNTVRV ERPLNLTYAH+  DNRTVLDGTFVYD ANK SANYALDSGNCKLKYTYVHKGLTTFEP YDVAKNTWDFAVS+RVY GDDTLRA+YQTS+RVLG+EWSR  KH AGFKIVASVNLAEE KAPK+VAET+WNFEM
Sbjct:    1 MKATLKGKYDVDKNGAAFANIAVNAGDVKFRAS----VTEATFINGPSLTGLALAVEKPGSFIVDYNVPKKDFRFQFMNTVRVGERPLNLTYAHSRGDNRTVLDGTFVYDSANKVSANYALDSGNCKLKYTYVHKGLTTFEPAYDVAKNTWDFAVSRRVYGGDDTLRASYQTSSRVLGVEWSRNPKHTAGFKIVASVNLAEEFKAPKLVAETTWNFEM 214
[Close]
BLAST of Cc_v2.0_10883.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445H2Y9|A0A445H2Y9_GLYSO (Outer envelope pore protein 24, chloroplastic (Fragment) OS=Glycine soja OX=3848 GN=D0Y65_037979 PE=4 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 1.356e-133
Identity = 190/218 (87.16%), Postives = 199/218 (91.28%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVY-GDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKATLKGKYD+DKNG A A  AVNAGDVKFRAS    VTEATFINGPSLTGL+LAVEKPGSFIVDYNVPKKDFRFQFMNTVRV ERPLNLTYAH+  DNRTVLDGTFVYD ANK SANYALDSGNCKLKYTYVHKGLTTFEP YDVAKNTWDFAVS+RVY GDDTLRA+YQTS+RVLG+EWSR  KH AGFKIVASVNLAEE KAPK+VAET+WNFEM
Sbjct:   16 MKATLKGKYDVDKNGAAFANIAVNAGDVKFRAS----VTEATFINGPSLTGLALAVEKPGSFIVDYNVPKKDFRFQFMNTVRVGERPLNLTYAHSRGDNRTVLDGTFVYDSANKVSANYALDSGNCKLKYTYVHKGLTTFEPAYDVAKNTWDFAVSRRVYGGDDTLRASYQTSSRVLGVEWSRNPKHTAGFKIVASVNLAEEFKAPKLVAETTWNFEM 229
[Close]
BLAST of Cc_v2.0_10883.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445IZT4|A0A445IZT4_GLYSO (Outer envelope pore protein 24, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_023858 PE=4 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 4.116e-133
Identity = 189/218 (86.70%), Postives = 198/218 (90.83%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVY-GDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKATLKGKYD+DKNG A A  AVNAGDVKFRAS    VTEATFINGPS TGL+LAVEKPGSFIVDYNVPKKDFRFQFMNTVRV ERPLNLTYAH+  DNRTVLDGTFVYD ANK SANYALDSGNCKLKYTYVHKGLTTFEP YDVAKNTWDFAVS+RVY GDDTLRA+YQTS+RVLG+EWSR  KH AGFKIVASVNLAEE KAPK+VAET+WNFEM
Sbjct:    1 MKATLKGKYDVDKNGAAFANIAVNAGDVKFRAS----VTEATFINGPSFTGLALAVEKPGSFIVDYNVPKKDFRFQFMNTVRVGERPLNLTYAHSRGDNRTVLDGTFVYDSANKVSANYALDSGNCKLKYTYVHKGLTTFEPAYDVAKNTWDFAVSRRVYGGDDTLRASYQTSSRVLGVEWSRNPKHTAGFKIVASVNLAEEFKAPKLVAETTWNFEM 214
[Close]
BLAST of Cc_v2.0_10883.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1L2Q5|I1L2Q5_SOYBN (Outer envelope pore protein 24, chloroplastic OS=Glycine max OX=3847 GN=GLYMA_09G114000 PE=4 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 4.116e-133
Identity = 189/218 (86.70%), Postives = 198/218 (90.83%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVY-GDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKATLKGKYD+DKNG A A  AVNAGDVKFRAS    VTEATFINGPS TGL+LAVEKPGSFIVDYNVPKKDFRFQFMNTVRV ERPLNLTYAH+  DNRTVLDGTFVYD ANK SANYALDSGNCKLKYTYVHKGLTTFEP YDVAKNTWDFAVS+RVY GDDTLRA+YQTS+RVLG+EWSR  KH AGFKIVASVNLAEE KAPK+VAET+WNFEM
Sbjct:    1 MKATLKGKYDVDKNGAAFANIAVNAGDVKFRAS----VTEATFINGPSFTGLALAVEKPGSFIVDYNVPKKDFRFQFMNTVRVGERPLNLTYAHSRGDNRTVLDGTFVYDSANKVSANYALDSGNCKLKYTYVHKGLTTFEPAYDVAKNTWDFAVSRRVYGGDDTLRASYQTSSRVLGVEWSRNPKHTAGFKIVASVNLAEEFKAPKLVAETTWNFEM 214
[Close]
BLAST of Cc_v2.0_10883.1 vs. ExPASy TrEMBL (2024)
Match: tr|C6TMC5|C6TMC5_SOYBN (Outer envelope pore protein 24, chloroplastic OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 4.646e-132
Identity = 188/218 (86.24%), Postives = 197/218 (90.37%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVY-GDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKATLKGKYD+DKNG A A  AVNAGDVKFRAS    VTEATFINGPS TGL+LAVEKPGSFIVDYNVPKKDFRFQFMNTVRV ERPLNLTYAH+  DNRTVLDGTFVYD ANK SANYALDSGNCKLKYTYVHKGLTTFEP YDVAKNTWDFAVS+RVY GDDTLRA+YQTS+ VLG+EWSR  KH AGFKIVASVNLAEE KAPK+VAET+WNFEM
Sbjct:    1 MKATLKGKYDVDKNGAAFANIAVNAGDVKFRAS----VTEATFINGPSFTGLALAVEKPGSFIVDYNVPKKDFRFQFMNTVRVGERPLNLTYAHSRGDNRTVLDGTFVYDSANKVSANYALDSGNCKLKYTYVHKGLTTFEPAYDVAKNTWDFAVSRRVYGGDDTLRASYQTSSTVLGVEWSRNPKHTAGFKIVASVNLAEEFKAPKLVAETTWNFEM 214
[Close]
BLAST of Cc_v2.0_10883.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RQ54|A0A0S3RQ54_PHAAN (Outer envelope pore protein 24, chloroplastic OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G280000 PE=4 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 6.584e-131
Identity = 180/217 (82.95%), Postives = 198/217 (91.24%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVYGDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKATLKGKYD+DKNG A AT AVNA DV+FRAS    VTEATFINGPSLTGL+LAVEKPGSFIVDYNVPKKDFRFQFMNTVRV +R LNLTY H+  DNRTVLDGTFV DPANK SANYALDSGNCKLKY+YVHKGLTT EPTYDVAKNTWDFAVS++VYGDD+LRA+YQTS++VLG+EW+R  KH AGFKI+ASVNLAEELKAPK++AET+WNFEM
Sbjct:    1 MKATLKGKYDVDKNGAAFATVAVNAADVRFRAS----VTEATFINGPSLTGLALAVEKPGSFIVDYNVPKKDFRFQFMNTVRVGDRALNLTYVHSRGDNRTVLDGTFVVDPANKVSANYALDSGNCKLKYSYVHKGLTTIEPTYDVAKNTWDFAVSRKVYGDDSLRASYQTSSKVLGVEWARNPKHNAGFKIIASVNLAEELKAPKLIAETTWNFEM 213
[Close]
BLAST of Cc_v2.0_10883.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9TUD3|A0A0L9TUD3_PHAAN (Outer envelope pore protein 24, chloroplastic OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g334500 PE=4 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 6.584e-131
Identity = 180/217 (82.95%), Postives = 198/217 (91.24%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVYGDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKATLKGKYD+DKNG A AT AVNA DV+FRAS    VTEATFINGPSLTGL+LAVEKPGSFIVDYNVPKKDFRFQFMNTVRV +R LNLTY H+  DNRTVLDGTFV DPANK SANYALDSGNCKLKY+YVHKGLTT EPTYDVAKNTWDFAVS++VYGDD+LRA+YQTS++VLG+EW+R  KH AGFKI+ASVNLAEELKAPK++AET+WNFEM
Sbjct:    1 MKATLKGKYDVDKNGAAFATVAVNAADVRFRAS----VTEATFINGPSLTGLALAVEKPGSFIVDYNVPKKDFRFQFMNTVRVGDRALNLTYVHSRGDNRTVLDGTFVVDPANKVSANYALDSGNCKLKYSYVHKGLTTIEPTYDVAKNTWDFAVSRKVYGDDSLRASYQTSSKVLGVEWARNPKHNAGFKIIASVNLAEELKAPKLIAETTWNFEM 213
[Close]
BLAST of Cc_v2.0_10883.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3UCF7|A0A1S3UCF7_VIGRR (Outer envelope pore protein 24, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=LOC106763973 PE=4 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 7.428e-131
Identity = 181/217 (83.41%), Postives = 197/217 (90.78%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVYGDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKATLKGKYD+DKNG A AT AVNA DVKFRAS    VTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRF FMNTVRV +R LNL+Y H+  DNRTVLDGTFV DPANK SANYALDSGNCKLKY+YVHKGLTT EPTYDVAKNTWDFAVS++VYGDDTLRA+YQTS++VLG+EW+R  KH AGFKI+ASVNLAEELKAPK++AET+WNFEM
Sbjct:    1 MKATLKGKYDVDKNGAAFATVAVNAADVKFRAS----VTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFHFMNTVRVGDRALNLSYVHSRGDNRTVLDGTFVVDPANKVSANYALDSGNCKLKYSYVHKGLTTIEPTYDVAKNTWDFAVSRKVYGDDTLRASYQTSSKVLGVEWARNPKHNAGFKIIASVNLAEELKAPKLIAETTWNFEM 213
[Close]
BLAST of Cc_v2.0_10883.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86TLZ2|A0AA86TLZ2_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS24471 PE=4 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 1.600e-130
Identity = 181/217 (83.41%), Postives = 197/217 (90.78%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVYGDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKATLKGKYD+DKNG A AT AVNA DVKFRAS    VTEATFINGPSLTGL+LAVEKPGSFIVDYNVPKKDFRFQFMNTVRV ER LNLTYAH+  +NRTVLDGTFV DPANK SANYALDSG+CKLKY+YVHKGLTT EPTYDVAKNTWDF VS+RVYGDDTLRA+YQTS++VLG+EW+R  KH AGFKI+AS+NLAEELKAPK+ AET+WNFEM
Sbjct:    1 MKATLKGKYDVDKNGAAFATVAVNAADVKFRAS----VTEATFINGPSLTGLALAVEKPGSFIVDYNVPKKDFRFQFMNTVRVGERALNLTYAHSRGENRTVLDGTFVLDPANKVSANYALDSGSCKLKYSYVHKGLTTIEPTYDVAKNTWDFVVSRRVYGDDTLRASYQTSSKVLGVEWARNPKHNAGFKIIASLNLAEELKAPKLTAETTWNFEM 213
[Close]
BLAST of Cc_v2.0_10883.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7CTR1|V7CTR1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G015300g PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 5.289e-130
Identity = 179/217 (82.49%), Postives = 195/217 (89.86%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVYGDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKATLKGKYD+DKNG   AT AVNA DVK RAS    VTEATFINGPSLTGL+LAVEKPG FIVDYNVPKKDFRFQFMNTVRV ERPLNLTYAH+  DNR VLDG+FV DPANK SANYALDSGNCKLKY+YVHKGLTT EP YDVAKNTWDFAVS+RVYGDDTL+A+YQTS++VLG+EW+R  KH AGFKI+ASVNLAEELKAPK++AET+WNFEM
Sbjct:    1 MKATLKGKYDVDKNGAVFATVAVNAADVKLRAS----VTEATFINGPSLTGLALAVEKPGVFIVDYNVPKKDFRFQFMNTVRVGERPLNLTYAHSRQDNRIVLDGSFVLDPANKVSANYALDSGNCKLKYSYVHKGLTTIEPAYDVAKNTWDFAVSRRVYGDDTLKASYQTSSKVLGVEWARNPKHNAGFKILASVNLAEELKAPKLIAETTWNFEM 213
[Close]
BLAST of Cc_v2.0_10883.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O49929|OEP24_PEA (Outer envelope pore protein 24, chloroplastic OS=Pisum sativum OX=3888 GN=OEP24 PE=1 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 4.375e-115
Identity = 158/217 (72.81%), Postives = 180/217 (82.95%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVYGDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKA LKGKYDLD N    AT A NAGDVK RAS    +T+ATF N PSLTGL LAVEKPGSF VDYNVPKKDFRFQFMNTVRV E+PLNL Y H+  DNRT+LDGT V+DP+NK SANYA++SGNCKLKY+Y HKGLTT EPTYDVAKN+WDFAVS +VYGDD+L+A+YQTS++VLGLEW+R SK    FK+VASVNLAEE K PK+  E++ NFEM
Sbjct:    1 MKAALKGKYDLDHNSSGAATVAFNAGDVKLRAS----ITDATFKNSPSLTGLVLAVEKPGSFSVDYNVPKKDFRFQFMNTVRVAEKPLNLAYIHSKGDNRTILDGTLVWDPSNKVSANYAVESGNCKLKYSYNHKGLTTIEPTYDVAKNSWDFAVSGKVYGDDSLKASYQTSSKVLGLEWTRNSKQTGCFKVVASVNLAEEKKIPKLSVESTLNFEM 213
[Close]
BLAST of Cc_v2.0_10883.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8H0Y1|OP24B_ARATH (Outer envelope pore protein 24B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP24B PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 1.283e-104
Identity = 141/217 (64.98%), Postives = 177/217 (81.57%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVYGDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKA++KGKYD DK  G + + A NAGD+K RA+    +T+AT + GP+LTGL+LAVEKPGSFIV+YNVPKKD RFQFMNTVR+ E+PLNLTY H+ +DNRT++DG+ V D ANK SAN+ + + NCK+KYTY H GL TFEP YD+AKNTWDFAVS+R Y  D +RATYQTS+++LG+EWSR +K  +GFK+ ASVNLA+ELK PK+ AET+WN EM
Sbjct:    3 MKASIKGKYDTDKTSG-IGSLAFNAGDIKLRAT----MTDATLVAGPTLTGLALAVEKPGSFIVEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGTNNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRNNK-ASGFKVCASVNLADELKTPKLTAETTWNLEM 213
[Close]
BLAST of Cc_v2.0_10883.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q1H5C9|OP24A_ARATH (Outer envelope pore protein 24A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP24A PE=1 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 2.731e-104
Identity = 139/217 (64.06%), Postives = 174/217 (80.18%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVYGDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKA+ KGK+D+DK+G ++A+   NAG+ K RA+    +T+A+F+ GPS  GLSLAVEKPG FI+DYNVPKKD RFQFMNT+R+ E+PLNLTY H   DNRT++DG+FV DPANK SANY + + NCKLKYTYVH G+ TFEP YDVAKN WDFA+S ++YG D L+ATYQTS+++LGLEWS  SK    FK+ AS+NLAEELK PK+ AET+WN E+
Sbjct:    2 MKASFKGKFDVDKSG-SVASLTFNAGNAKLRAT----MTDASFVAGPSFNGLSLAVEKPGFFIIDYNVPKKDVRFQFMNTIRIAEKPLNLTYIHMRGDNRTIVDGSFVIDPANKLSANYMVGTKNCKLKYTYVHGGIATFEPCYDVAKNMWDFAISHKLYGGDNLKATYQTSSKMLGLEWSNNSKSTGSFKVCASMNLAEELKPPKLTAETTWNLEL 213
[Close]
BLAST of Cc_v2.0_10883.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|B8ANR3|OEP24_ORYSI (Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OEP24 PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.032e-67
Identity = 106/228 (46.49%), Postives = 153/228 (67.11%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAV-NAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFS--------DNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKG--LTTFEPTYDVAKNTWDFAVSQRVYGDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKAT+KG+Y+ DK   A   A   +A D++F+AS     T+A F  GPSL GL+L +EKPGSF++D     KD RFQFMN+  + +R ++LTY H+ +          RT LDG+  +DPANK S ++ L S  C++KY+Y H    LTT EP +D A N WDFAV+++  G D ++ATYQ ST++L L+W+R SK  A FK+ AS +L+++ KAPK++AE++WN+E+
Sbjct:    1 MKATVKGRYEGDKATAAATLAFTPSAADLRFKAS----ATDAAFARGPSLEGLTLTLEKPGSFLLDLKPHSKDVRFQFMNSALLLDRRVSLTYTHSTTLSPGPAKPPARTALDGSLTFDPANKLSLSHTLGSSGCRVKYSYAHGQDRLTTIEPCFDTANNAWDFAVTRKFQGGDAIKATYQASTKLLALDWTRDSKIGASFKVAASFDLSDQSKAPKLIAESTWNYEI 224
[Close]
BLAST of Cc_v2.0_10883.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q75IQ4|OEP24_ORYSJ (Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=OEP24 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.523e-67
Identity = 106/228 (46.49%), Postives = 153/228 (67.11%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAV-NAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDN--------RTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKG--LTTFEPTYDVAKNTWDFAVSQRVYGDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKAT+KG+Y+ DK   A   A   +A D++F+AS     T+A F  GPSL GL L +EKPGSF++D     KD RFQFMN+  + +R ++LTY H+ + +        RT LDG+  +DPANK S ++ L S  C++KY+Y H    LTT EP +D A N WDFAV+++  G D ++ATYQ ST++L L+W+R SK  A FK+ AS +L+++ KAPK++AE++WN+E+
Sbjct:    1 MKATVKGRYEGDKATAAATLAFTPSAADLRFKAS----ATDAAFARGPSLEGLILTLEKPGSFLLDLKPHSKDVRFQFMNSALLLDRRVSLTYTHSTTLSPGPAKLPARTALDGSLTFDPANKLSLSHTLGSSGCRVKYSYAHGQDRLTTIEPCFDTANNAWDFAVTRKFQGGDAIKATYQASTKLLALDWTRDSKIGASFKVAASFDLSDQSKAPKLIAESTWNYEI 224
[Close]
BLAST of Cc_v2.0_10883.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:17235184-17236478 FORWARD LENGTH=213)

HSP 1 Score: 303.523 bits (776), Expect = 1.342e-105
Identity = 141/217 (64.98%), Postives = 177/217 (81.57%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVYGDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKA++KGKYD DK  G + + A NAGD+K RA+    +T+AT + GP+LTGL+LAVEKPGSFIV+YNVPKKD RFQFMNTVR+ E+PLNLTY H+ +DNRT++DG+ V D ANK SAN+ + + NCK+KYTY H GL TFEP YD+AKNTWDFAVS+R Y  D +RATYQTS+++LG+EWSR +K  +GFK+ ASVNLA+ELK PK+ AET+WN EM
Sbjct:    3 MKASIKGKYDTDKTSG-IGSLAFNAGDIKLRAT----MTDATLVAGPTLTGLALAVEKPGSFIVEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGTNNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRNNK-ASGFKVCASVNLADELKTPKLTAETTWNLEM 213
[Close]
BLAST of Cc_v2.0_10883.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:17096233-17097910 REVERSE LENGTH=213)

HSP 1 Score: 302.753 bits (774), Expect = 2.857e-105
Identity = 139/217 (64.06%), Postives = 174/217 (80.18%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVYGDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKA+ KGK+D+DK+G ++A+   NAG+ K RA+    +T+A+F+ GPS  GLSLAVEKPG FI+DYNVPKKD RFQFMNT+R+ E+PLNLTY H   DNRT++DG+FV DPANK SANY + + NCKLKYTYVH G+ TFEP YDVAKN WDFA+S ++YG D L+ATYQTS+++LGLEWS  SK    FK+ AS+NLAEELK PK+ AET+WN E+
Sbjct:    2 MKASFKGKFDVDKSG-SVASLTFNAGNAKLRAT----MTDASFVAGPSFNGLSLAVEKPGFFIIDYNVPKKDVRFQFMNTIRIAEKPLNLTYIHMRGDNRTIVDGSFVIDPANKLSANYMVGTKNCKLKYTYVHGGIATFEPCYDVAKNMWDFAISHKLYGGDNLKATYQTSSKMLGLEWSNNSKSTGSFKVCASMNLAEELKPPKLTAETTWNLEL 213
[Close]
BLAST of Cc_v2.0_10883.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:17096233-17097910 REVERSE LENGTH=167)

HSP 1 Score: 210.305 bits (534), Expect = 1.762e-69
Identity = 109/217 (50.23%), Postives = 137/217 (63.13%), Query Frame = 0 
Query:    1 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVYGDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
            MKA+ KGK+D+DK+G ++A+   NAG+ K RA+    +T+A+F+ GPS  GLSLAVEKPG FI+DYNVPKKD RFQFMNT+R+ E+PLNLTY H   DNRT++DG+FV DPANK SANY                                               ATYQTS+++LGLEWS  SK    FK+ AS+NLAEELK PK+ AET+WN E+
Sbjct:    2 MKASFKGKFDVDKSG-SVASLTFNAGNAKLRAT----MTDASFVAGPSFNGLSLAVEKPGFFIIDYNVPKKDVRFQFMNTIRIAEKPLNLTYIHMRGDNRTIVDGSFVIDPANKLSANY----------------------------------------------MATYQTSSKMLGLEWSNNSKSTGSFKVCASMNLAEELKPPKLTAETTWNLEL 167
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_10883.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|I1M8E3|I1M8E3_SOYBN7.945e-13487.16Outer envelope pore protein 24, chloroplastic OS=G... [more]
tr|A0A445H2Y9|A0A445H2Y9_GLYSO1.356e-13387.16Outer envelope pore protein 24, chloroplastic (Fra... [more]
tr|A0A445IZT4|A0A445IZT4_GLYSO4.116e-13386.70Outer envelope pore protein 24, chloroplastic OS=G... [more]
tr|I1L2Q5|I1L2Q5_SOYBN4.116e-13386.70Outer envelope pore protein 24, chloroplastic OS=G... [more]
tr|C6TMC5|C6TMC5_SOYBN4.646e-13286.24Outer envelope pore protein 24, chloroplastic OS=G... [more]
tr|A0A0S3RQ54|A0A0S3RQ54_PHAAN6.584e-13182.95Outer envelope pore protein 24, chloroplastic OS=V... [more]
tr|A0A0L9TUD3|A0A0L9TUD3_PHAAN6.584e-13182.95Outer envelope pore protein 24, chloroplastic OS=P... [more]
tr|A0A1S3UCF7|A0A1S3UCF7_VIGRR7.428e-13183.41Outer envelope pore protein 24, chloroplastic OS=V... [more]
tr|A0AA86TLZ2|A0AA86TLZ2_9FABA1.600e-13083.41Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|V7CTR1|V7CTR1_PHAVU5.289e-13082.49Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
back to top
BLAST of Cc_v2.0_10883.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 5
Match NameE-valueIdentityDescription
sp|O49929|OEP24_PEA4.375e-11572.81Outer envelope pore protein 24, chloroplastic OS=P... [more]
sp|Q8H0Y1|OP24B_ARATH1.283e-10464.98Outer envelope pore protein 24B, chloroplastic OS=... [more]
sp|Q1H5C9|OP24A_ARATH2.731e-10464.06Outer envelope pore protein 24A, chloroplastic OS=... [more]
sp|B8ANR3|OEP24_ORYSI1.032e-6746.49Outer envelope pore protein 24, chloroplastic OS=O... [more]
sp|Q75IQ4|OEP24_ORYSJ2.523e-6746.49Outer envelope pore protein 24, chloroplastic OS=O... [more]
back to top
BLAST of Cc_v2.0_10883.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
|1.342e-10564.98Symbols: no symbol available | no full name availa... [more]
|2.857e-10564.06Symbols: no symbol available | no full name availa... [more]
|1.762e-6950.23Symbols: no symbol available | no full name availa... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034626Outer envelope pore protein 24PANTHERPTHR35284OUTER ENVELOPE PORE PROTEIN 24A, CHLOROPLASTIC-RELATEDcoord: 1..217

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_10883.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_10883.1; Name=Cc_v2.0_10883.1; organism=Cajanus cajan; type=mRNA; length=654bp
ATGAAGGCTACTCTCAAGGGCAAGTACGACCTCGACAAAAACGGCGGTGC
ACTTGCCACCGCCGCCGTCAACGCCGGCGACGTCAAGTTCAGAGCCTCCT
TCAGAGCCTCCGTAACGGAAGCCACCTTCATTAACGGCCCCAGCCTCACC
GGTTTGTCTCTCGCCGTCGAGAAGCCCGGTTCCTTCATCGTCGACTACAA
CGTCCCCAAAAAGGACTTTCGTTTTCAGTTCATGAACACGGTTAGGGTTA
GGGAGAGGCCGTTGAATTTGACTTACGCCCACAACTTCAGTGACAACCGC
ACCGTTTTGGATGGAACCTTTGTGTACGATCCTGCGAACAAGTTTTCGGC
CAATTATGCTCTTGACTCGGGAAACTGCAAGTTGAAGTACACTTATGTTC
ACAAGGGGTTGACCACGTTTGAACCCACCTATGACGTGGCTAAGAACACG
TGGGACTTTGCGGTTTCCCAGAGGGTCTATGGTGATGACACGTTGAGGGC
CACTTACCAGACATCCACCAGGGTTTTGGGCCTTGAGTGGTCGCGGATGT
CCAAACACCCTGCTGGCTTCAAGATCGTAGCATCTGTTAACTTGGCTGAA
GAATTGAAAGCTCCCAAAGTTGTTGCTGAGACCTCATGGAATTTTGAGAT
GTAG
back to top

protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_10883.1

>drCajCajn.Asha.2.0.Cc_v2.0_10883.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_10883.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_10883.1; organism=Cajanus cajan; type=polypeptide; length=217bp
MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLT
GLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNR
TVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNT
WDFAVSQRVYGDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAE
ELKAPKVVAETSWNFEM
back to top

mRNA from alignment at CcLG05_v2.0:5577696..5579656-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_10883.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_10883.1; Name=Cc_v2.0_10883.1; organism=Cajanus cajan; type=mRNA; length=1961bp; location=Sequence derived from: CcLG05_v2.0:5577696..5579656- (Cajanus cajan
ATGAAGGCTACTCTCAAGGGCAAGTACGACCTCGACAAAAACGGCGGTGC
ACTTGCCACCGCCGCCGTCAACGCCGGCGACGTCAAGTTCAGAGCCTCCG
TAACGGAAGCCACCTTCATTAACGGCCCCAGCCCGAAAAAAACGGGGGTG
CATTTGCCACCGCCGCCGTCAACGCCGGCGACGTCAAGTTCAGAGCCTCC
GTAACGGAAGCCACCTTCATTAACGGCCCCAGCCTCACCGGTTTGTCTCT
CGCCGTCGAGAAGCCCGGTTCCTTCATCGTCGACTACAACGTCCCCAAAA
AGGTACCTTCCCAAATACCCACTTGGTTACTTACTCAGATTAATCCTAAA
AATCTTTTTTTTTTTTTGCAGGACTTTCGTTTTCAGTTCATGAACACGGT
TAGGGTTAGGGAGAGGCCGTTGAATTTGACTTACGCCCACAACTTCAGTG
ACAACCGCACCGTTTTGGATGGAACCTTTGTGTACGATCCTGCGAACAAG
TTTTCGGCCAATTATGCTCTTGACTCGGGAAACTGCAAGTTGAAGTACAC
TTATGTTCACAAGGGGTTGACCACGTTTGAACCCACCTATGACGTGGCTA
AGAACACGTGGGACTTTGCGGTTTCCCAGAGGGTCTATGGTGATGACACG
TTGAGGGCCACTTACCAGACATCCACCAGGGTTTTGGGCCTTGAGTGGTC
GCGGATGTCCAAACACCCTGCTGGCTTCAAGGTGAAATCAATTGATTCAC
AATGGATTTCAATGTTGTGTTGCTGGGTTGACTTGTGGTTTTTTGTTTCA
CAATTTTGATGTTTTGAGTTTAGCCTGTCTCTCTCTGGTAGAGTTCATTG
ATTGGTTTTTGATTTGTCCAAAATGAATGTGGATGCCAGTTCTGATAGAG
GAATGCTAGCGACACTCTCTCTTTAGAAATCACAAATGTCTTATTTAATG
AGTCTCTCCTGATTTAGTGGTAAGATCCACTACAAGTTGTGATTTTCTAT
CAATTATGGAGTGTTAGAATGAGTGTCGCTAACATTTCTCATTTTGAAAT
GGAATGGTGTCATGTCCCAAGTGGTTGACTGCTCACTCGCCTGAAGTGTA
TTGATGTTGAGGCCTGAATCCTTGAGATTCCGGCATGGTTGAGACATCGT
GGAAAAACAAGAGTCCGAGATATGGATTAGGCGATGAGCGTGATGCATAA
TAGTTTTTTTCCCTTCATGTTCTTGTGTGTTGCTTGAACTGATTTTGAAT
GATGAATTTGCATGTGCTGTGTAATGTATAATCTGTTTCAGCATAAGCTG
GAAATTTTGCATATGTGTTGTGCAAATTGCTGCTTGAAGATATAATCATA
ATTATATCAAAGTAAAGGCTGTATTAGATTATTTATGTAAGCTCATATGA
TATATAATATAATTGGATAAGAATTTGTTAAAGAGGGGTTGCAATGGGTA
CTGATATCTATCTTCATTCTCATTTGACCTTACCACAAAGTTGTCAATTG
TCATCGGTAGTCTTGATTTTTCCTTTGTACCTTCATTTCTTACATTCGTT
AACTTAAATTAGTTATATGTTGGGCGTACTACAGGTTACTGGTCAGTGCT
GTGGCATTTCTTTCTCTCTGTATCTTCAAAATATATTTTACAGACTTGGA
TATATGTCAGAAGTTAGAACTGTGCATAATGACTTCTAGATGCCTTGTCT
GTTCTTCTATTAGAAACTTAATCAATGGAGGTTTTACTTTTGAGTTTTGA
GGATTCTGCTATAGTTTTTTCCTTCATTAATTTAATCAAATTGGTTGACT
CCCCGCACCCCAATATATTAAGTTATTCCTGAGTAACATCTTTTTGTTCA
GATTGTCTAACTTTAAGCTTTGTCTTTCAGATCGTAGCATCTGTTAACTT
GGCTGAAGAATTGAAAGCTCCCAAAGTTGTTGCTGAGACCTCATGGAATT
TTGAGATGTAG
back to top

Coding sequence (CDS) from alignment at CcLG05_v2.0:5577696..5579656-

>drCajCajn.Asha.2.0.Cc_v2.0_10883.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_10883.1; Name=Cc_v2.0_10883.1; organism=Cajanus cajan; type=CDS; length=654bp; location=Sequence derived from: CcLG05_v2.0:5577696..5579656- (Cajanus cajan
ATGAAGGCTACTCTCAAGGGCAAGTACGACCTCGACAAAAACGGCGGTGC
ACTTGCCACCGCCGCCGTCAACGCCGGCGACGTCAAGTTCAGAGCCTCCT
TCAGAGCCTCCGTAACGGAAGCCACCTTCATTAACGGCCCCAGCCTCACC
GGTTTGTCTCTCGCCGTCGAGAAGCCCGGTTCCTTCATCGTCGACTACAA
CGTCCCCAAAAAGGACTTTCGTTTTCAGTTCATGAACACGGTTAGGGTTA
GGGAGAGGCCGTTGAATTTGACTTACGCCCACAACTTCAGTGACAACCGC
ACCGTTTTGGATGGAACCTTTGTGTACGATCCTGCGAACAAGTTTTCGGC
CAATTATGCTCTTGACTCGGGAAACTGCAAGTTGAAGTACACTTATGTTC
ACAAGGGGTTGACCACGTTTGAACCCACCTATGACGTGGCTAAGAACACG
TGGGACTTTGCGGTTTCCCAGAGGGTCTATGGTGATGACACGTTGAGGGC
CACTTACCAGACATCCACCAGGGTTTTGGGCCTTGAGTGGTCGCGGATGT
CCAAACACCCTGCTGGCTTCAAGATCGTAGCATCTGTTAACTTGGCTGAA
GAATTGAAAGCTCCCAAAGTTGTTGCTGAGACCTCATGGAATTTTGAGAT
GTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR034626OEP24
Vocabulary: Biological Process
TermDefinition
GO:0034765regulation of monoatomic ion transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022843voltage-gated monoatomic cation channel activity