Cc_v2.0_14007.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cc_v2.0_14007.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151THU8|A0A151THU8_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_012936 PE=4 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 7.021e-113 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 Query: 1 MEKLFRIKTNFLKFLSKQPVDLVVAFQNPTLSPCRSPAHLVSIIPKEARRKHRGESFSAREPTSPKVSCMGQVQGKKKRKARKQKRAQVQAQSQAQKSECVGEKNKILLWIHKEGRKHNDKVLEEKASGTVEAPTLNTMKKFASGRGSLSDFHVTIAET 159 MEKLFRIKTNFLKFLSKQPVDLVVAFQNPTLSPCRSPAHLVSIIPKEARRKHRGESFSAREPTSPKVSCMGQVQGKKKRKARKQKRAQVQAQSQAQKSECVGEKNKILLWIHKEGRKHNDKVLEEKASGTVEAPTLNTMKKFASGRGSLSDFHVTIAET Sbjct: 1 MEKLFRIKTNFLKFLSKQPVDLVVAFQNPTLSPCRSPAHLVSIIPKEARRKHRGESFSAREPTSPKVSCMGQVQGKKKRKARKQKRAQVQAQSQAQKSECVGEKNKILLWIHKEGRKHNDKVLEEKASGTVEAPTLNTMKKFASGRGSLSDFHVTIAET 159
BLAST of Cc_v2.0_14007.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VQE3|A0A1S3VQE3_VIGRR (Uncharacterized protein At1g76070 OS=Vigna radiata var. radiata OX=3916 GN=LOC106777343 PE=4 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 9.912e-64 Identity = 122/164 (74.39%), Postives = 133/164 (81.10%), Query Frame = 0 Query: 1 MEKLFRIKTNFLKFLSKQPVDLVVAFQNPTLSPCRSPAHLVSIIPKEARRKHRGESFSAREPTSPKVSCMGQVQGKKKRKARKQKRAQVQAQSQAQKS---ECVGEKNKILLWIHK---EGRKHNDKVLEEKASGTVEAPTLNTMKKFASGRGSLSDFHVTIAE 158 MEKLF+I+ FLKFL+KQP LVVAFQNPT SPCRSPA LVSIIP+EARRK RGESFS +EPTSPKVSCMGQVQGKKKRKARKQKRAQ QA +Q + + VGE KI+LWI K EG+KH KVLEEK VEAP+LNTMKKFASGRGSL DF VTIAE Sbjct: 1 MEKLFQIRRTFLKFLTKQPATLVVAFQNPTPSPCRSPARLVSIIPREARRKRRGESFSTKEPTSPKVSCMGQVQGKKKRKARKQKRAQTQAHTQKDSTKPVDSVGELKKIVLWIRKGSDEGQKH--KVLEEKR---VEAPSLNTMKKFASGRGSLYDFDVTIAE 159
BLAST of Cc_v2.0_14007.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445HYJ1|A0A445HYJ1_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_029320 PE=4 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 7.613e-63 Identity = 123/163 (75.46%), Postives = 132/163 (80.98%), Query Frame = 0 Query: 1 MEKLFRIKTNFLKFLSKQPVD-LVVAFQNPT-LSPCRSPAHLVSIIPKEARRKHRGESFSAREPTSPKVSCMGQVQGKKKRKARKQKRAQVQAQSQAQKSECVGEKNKILLWIHK---EGRKHNDKVLEEKASGTVEAPTLNTMKKFASGRGSLSDFHVTIAE 158 MEKLF+IK NFLKFL+KQP LVVAFQNPT +SPCRSPA +VSIIPKEARRKH+GESFSAREPTSPKVSCMGQVQGKKK+KARKQKRA S +GEK KILLWI K EGRKH +VLEEKA VEAP+LNTMKKFASGRGSL DF V IAE Sbjct: 1 MEKLFQIKRNFLKFLTKQPAAALVVAFQNPTRMSPCRSPARMVSIIPKEARRKHKGESFSAREPTSPKVSCMGQVQGKKKKKARKQKRALAHKDS-------IGEKKKILLWIQKGSDEGRKH--RVLEEKA---VEAPSLNTMKKFASGRGSLYDFDVKIAE 151
BLAST of Cc_v2.0_14007.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86S298|A0AA86S298_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS4792 PE=4 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.587e-62 Identity = 119/162 (73.46%), Postives = 132/162 (81.48%), Query Frame = 0 Query: 1 MEKLFRIKTNFLKFLSKQPVDLVVAFQNPTLSPCRSPAHLVSIIPKEARRKHRGESFSAREPTSPKVSCMGQVQGKKKRKARKQKRAQVQAQSQAQKSECVGEKNKILLWIHK----EGRKHNDKVLEEKASGTVEAPTLNTMKKFASGRGSLSDFHVTIAE 158 MEKLF++KTNFLKFL+KQP LVVAFQNPT SPCRSPA +VSIIP+EARRK + ESFSAREPTSPKVSCMGQVQGKK +KARKQK+AQ + A+ + VGE KI+LWI K EG KH KVLEEK TVEAP+LNTMKKFASGRGSL DF VTIAE Sbjct: 28 MEKLFQMKTNFLKFLTKQPATLVVAFQNPTPSPCRSPARVVSIIPREARRKRKDESFSAREPTSPKVSCMGQVQGKKNKKARKQKKAQ-AQKDPARNLDSVGEWKKIVLWIRKGSSDEGGKH--KVLEEK---TVEAPSLNTMKKFASGRGSLYDFDVTIAE 183
BLAST of Cc_v2.0_14007.1 vs. ExPASy TrEMBL (2024)
Match: tr|C6TIL4|C6TIL4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100813956 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.126e-62 Identity = 123/163 (75.46%), Postives = 132/163 (80.98%), Query Frame = 0 Query: 1 MEKLFRIKTNFLKFLSKQPVD-LVVAFQNPTL-SPCRSPAHLVSIIPKEARRKHRGESFSAREPTSPKVSCMGQVQGKKKRKARKQKRAQVQAQSQAQKSECVGEKNKILLWIHK---EGRKHNDKVLEEKASGTVEAPTLNTMKKFASGRGSLSDFHVTIAE 158 MEKLF+IK NFLKFL+KQP LVVAFQNPT+ SPCRSPA +VSIIPKEARRKH+GESFSAREPTSP VSCMGQVQGKKK+KARKQKRAQ S +GEK KILLWI K EGRKH +VLEEKA VEAP+LNTMKKFASGRGSL DF V IAE Sbjct: 1 MEKLFQIKRNFLKFLTKQPAAALVVAFQNPTMMSPCRSPARMVSIIPKEARRKHKGESFSAREPTSPTVSCMGQVQGKKKKKARKQKRAQAHKDS-------IGEKKKILLWIQKGSDEGRKH--RVLEEKA---VEAPSLNTMKKFASGRGSLYDFDVKIAE 151
BLAST of Cc_v2.0_14007.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445M3T1|A0A445M3T1_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_001714 PE=4 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.054e-61 Identity = 114/168 (67.86%), Postives = 133/168 (79.17%), Query Frame = 0 Query: 1 MEKLFRIKTNFLKFLSKQPVD-LVVAFQNPT-LSPCRSPAHLVSIIPKEARRKHRGESFSAREPTSPKVSCMGQVQGKKKRKARKQKRAQVQA----QSQAQKSECVGEKNKILLWIHK---EGRKHNDKVLEEK-ASGTVEAPTLNTMKKFASGRGSLSDFHVTIAE 158 MEKLF++K NFLKFL+KQP LVVAFQNPT +SPCRSPA +VSIIPKEARRKH+GE+FSAREPTSPKVSCMGQVQGKK++ ++++ + + + +GEK +ILLWI K EGRK KVLEEK ASGTVEAP+LNTMKKFASGRGSL DF VTIAE Sbjct: 1 MEKLFQVKRNFLKFLTKQPAAALVVAFQNPTRMSPCRSPARVVSIIPKEARRKHKGETFSAREPTSPKVSCMGQVQGKKRKARKQKRAQAQDQAQAHKDPTKNTNSIGEKKEILLWIQKGSDEGRKR--KVLEEKRASGTVEAPSLNTMKKFASGRGSLYDFDVTIAE 166
BLAST of Cc_v2.0_14007.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LSZ3|A0A4D6LSZ3_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG4g2120 PE=4 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 1.384e-59 Identity = 119/164 (72.56%), Postives = 132/164 (80.49%), Query Frame = 0 Query: 1 MEKLFRIKTNFLKFLSKQPVDLVVAFQNPTLSPCRSPAHLVSIIPKEARRKHRGESFSAREPTSPKVSCMGQVQGKKKRKARKQKRAQVQAQSQAQKS---ECVGEKNKILLWIHK---EGRKHNDKVLEEKASGTVEAPTLNTMKKFASGRGSLSDFHVTIAE 158 MEKLF+++ NFLKFL+KQP LVVAFQNPT SPCRSPA +VSIIP+EARRK RGESFS REPTSPKVSCMGQVQ KKKRKARKQK+AQ Q Q+Q + + VGE KI+LWI K EG+K KVLEEK VEAP+LNTMKKFASGRGSL DF VTIAE Sbjct: 1 MEKLFQMRNNFLKFLTKQPATLVVAFQNPTPSPCRSPARMVSIIPREARRKRRGESFSTREPTSPKVSCMGQVQCKKKRKARKQKQAQTQTQAQKDSTKTVDSVGELKKIVLWIRKGSDEGQKQ--KVLEEKR---VEAPSLNTMKKFASGRGSLYDFDVTIAE 159
BLAST of Cc_v2.0_14007.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3T428|A0A0S3T428_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.10G147700 PE=4 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 6.016e-59 Identity = 116/162 (71.60%), Postives = 131/162 (80.86%), Query Frame = 0 Query: 1 MEKLFRIKTNFLKFLSKQPVDLVVAFQNPTLSPCRSPAHLVSIIPKEARRKHRGESFSAREPTSPKVSCMGQVQGKKKRKARKQKRAQVQAQSQAQKSECVGEKNKILLWIHK---EGRKHNDKVLEEKASGTVEAPTLNTMKKFASGRGSLSDFHVTIAET 159 MEKLF+++ +FLKFL+KQP LVVAFQNPT SPCRSPA +VSIIP+EARRK RGESFS +EPTSPKVSCMGQVQGKKKRKARKQK+AQ Q S + + VGE KI+L I K E +KH KVLEEK VEAP+LNTMKKFASGRGSL DF VTIAE+ Sbjct: 1 MEKLFQMRRSFLKFLTKQPATLVVAFQNPTPSPCRSPARMVSIIPREARRKRRGESFSTKEPTSPKVSCMGQVQGKKKRKARKQKKAQTQKDS-TKTVDSVGELKKIVLRIRKGSDERQKH--KVLEEKR---VEAPSLNTMKKFASGRGSLYDFDVTIAES 156
BLAST of Cc_v2.0_14007.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0JM21|A0A8T0JM21_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0156190 PE=4 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 2.780e-58 Identity = 116/162 (71.60%), Postives = 131/162 (80.86%), Query Frame = 0 Query: 1 MEKLFRIKTNFLKFLSKQPVDLVVAFQNPTLSPCRSPAHLVSIIPKEARRKHRGESFSAREPTSPKVSCMGQVQGKKKRKARKQKRAQVQAQSQAQKSECVGEKNKILLWIHK---EGRKHNDKVLEEKASGTVEAPTLNTMKKFASGRGSLSDFHVTIAET 159 MEKLF+++ +FLKFL+KQP LVVAFQNPT SPCRSPA +VSIIP+EARRK RGESFS +EPTSPKVSCMGQVQGKKKRKARKQK+AQ Q S + + VGE KI+L I K E +KH KVLEEK VEAP+LNTMKKFASGRGSL DF VTIAE+ Sbjct: 1 MEKLFQMRRSFLKFLTKQPATLVVAFQNPTPSPCRSPARMVSIIPREARRKRRGESFSTKEPTSPKVSCMGQVQGKKKRKARKQKKAQTQKDS-TKTVDSVGELKKIVLRIRKGSDERQKH--KVLEEK---RVEAPSLNTMKKFASGRGSLYDFDVTIAES 156
BLAST of Cc_v2.0_14007.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371GYC2|A0A371GYC2_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_21885 PE=4 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.172e-54 Identity = 108/154 (70.13%), Postives = 121/154 (78.57%), Query Frame = 0 Query: 1 MEKLFRIKTNFLKFLSKQPVDLVVAFQNPTLSPCRSPAHLVSIIPKEARRKHRGESFSAREPTSPKVSCMGQVQGKKKRKARKQKRAQVQAQSQAQKSECVGEKNKILLWIHK-EGRKHNDKVLEEKASGTVEAPTLNTMKKFASGRGSLSDFH 153 MEKLF+IK+NFLKFLSKQP +V FQNP +SPCRSPAH+VSI+P+EARRKHRGESF +EPTSPKVSCMGQVQ KKKRKARKQKR + QAQ K+ KILLWI K + KVLEEK TVEAP+L+TMKKFASGRGSL DFH Sbjct: 1 MEKLFQIKSNFLKFLSKQPA-AIVTFQNPKVSPCRSPAHVVSIVPREARRKHRGESF--KEPTSPKVSCMGQVQDKKKRKARKQKRDRAQAQQAPTKNIDSVRCKKILLWIPKGSDEERKPKVLEEKGMATVEAPSLSTMKKFASGRGSLYDFH 151
BLAST of Cc_v2.0_14007.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:7032308-7033030 FORWARD LENGTH=240) HSP 1 Score: 48.521 bits (114), Expect = 3.571e-7 Identity = 42/134 (31.34%), Postives = 60/134 (44.78%), Query Frame = 0 Query: 43 IIPKEAR--RKHRGESFSAREPTSPKVSCMGQVQGKKKRKARKQKRAQVQAQSQAQKSECV--GEKN-------KILLWIHKEGRKHNDKVLEE---------KASGTVEAPTLNTMKKFASGRGSLSDFHVTI 156 ++P AR R + E+ A EPTSPKVSC+GQV+ + + K+ +A ++ + S CV E N +I RK N + AP+L MKKFAS R +L F T+ Sbjct: 55 LVPTAARVRRNTKYEAVFA-EPTSPKVSCIGQVKLARPKCPEKKNKAPKNLKTASSLSSCVIKEEDNGSFSKLKRIFSMRSYPSRKSNSTAFAAAAAREHPIAEVDAVTAAPSLGAMKKFASSREALGGFDWTV 187
BLAST of Cc_v2.0_14007.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:28546617-28547435 FORWARD LENGTH=272) HSP 1 Score: 48.521 bits (114), Expect = 4.629e-7 Identity = 42/139 (30.22%), Postives = 58/139 (41.73%), Query Frame = 0 Query: 40 LVSIIPKEARRKHRGESFSAREPTSPKVSCMGQVQ-GKKKRKARKQKRAQ---VQAQSQAQKSECVGEKNK--------ILLWIHKEGRKHNDKVLEEKASG----------TVEAPTLNTMKKFASGRGSLSDFHVTI 156 +V ++P AR + EPTSPKVSC+GQ++ GK K K+ +A + S+ S E K I + GR + K S T P+L MKKFAS R +L DF + Sbjct: 61 MVPLVPNAARVRRNKSDAVWDEPTSPKVSCIGQIKLGKSKCPTGKKNKAPSSLIPKISKTSTSSLTKEDEKGRLSKIKSIFSFSPASGRNTSRKSHPTAVSAADEHPVTVVSTAAVPSLGQMKKFASSRDALGDFDWAV 199 The following BLAST results are available for this feature:
BLAST of Cc_v2.0_14007.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Cc_v2.0_14007.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot ) Total hits: 0
BLAST of Cc_v2.0_14007.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCajCajn.Asha.2.0.Cc_v2.0_14007.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_14007.1; Name=Cc_v2.0_14007.1; organism=Cajanus cajan; type=mRNA; length=480bpback to top protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_14007.1 >drCajCajn.Asha.2.0.Cc_v2.0_14007.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_14007.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_14007.1; organism=Cajanus cajan; type=polypeptide; length=159bpback to top mRNA from alignment at CcLG06_v2.0:26667984..26668556- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drCajCajn.Asha.2.0.Cc_v2.0_14007.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_14007.1; Name=Cc_v2.0_14007.1; organism=Cajanus cajan; type=mRNA; length=573bp; location=Sequence derived from: CcLG06_v2.0:26667984..26668556- (Cajanus cajanback to top Coding sequence (CDS) from alignment at CcLG06_v2.0:26667984..26668556- >drCajCajn.Asha.2.0.Cc_v2.0_14007.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_14007.1; Name=Cc_v2.0_14007.1; organism=Cajanus cajan; type=CDS; length=480bp; location=Sequence derived from: CcLG06_v2.0:26667984..26668556- (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|