Cc_v2.0_14350.1

Transcript Overview
NameCc_v2.0_14350.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_14350.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length930
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG06_v2.0chromosomeCcLG06_v2.0:30752912..30754800 -Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjccaL268Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0456Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0523Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL573Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0758Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL674Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0967Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ccapsR560Pisum sativum Cameor genome v1aPisum sativum
carccaL406Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR594Pisum sativum Cameor genome v1aPisum sativum
ccavrvR497Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR522Vigna radiata cv. VC1973A genome v6.0Vigna radiata
carccaL602Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavfhR523Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
carccaL658Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavfhR563Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR590Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccapvR609Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavssR600Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR615Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccccaL1022Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL1147Cajanus cajan Asha genome v1.0Cajanus cajan
ccavumR568Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR458Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR588Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR471Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR613Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavunR397Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccavunR409Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR601Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR621Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Psat4g080640.2Pisum sativum Cameor genome v1aPisum sativum
evm.Ca_v2.0_20757Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Vigun03g290300.5Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-XM_014653658.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_00964Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va01G077250.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.003G232200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg18109.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.4g131680.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
PvulFLAVERTChr03.1407Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigun03g290300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vum_01G02701.1Vigna umbellata FF25 genome v1.0Vigna umbellata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_024966Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_14350drCajCajn.Asha.2.0.Cc_v2.0_14350Cajanus cajangene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_14350.1drCajCajn.Asha.2.0.cds.Cc_v2.0_14350.1Cajanus cajanCDS
cds.Cc_v2.0_14350.1drCajCajn.Asha.2.0.cds.Cc_v2.0_14350.1_2Cajanus cajanCDS
cds.Cc_v2.0_14350.1drCajCajn.Asha.2.0.cds.Cc_v2.0_14350.1_3Cajanus cajanCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_14350.1.exon3drCajCajn.Asha.2.0.Cc_v2.0_14350.1.exon3Cajanus cajanexon
Cc_v2.0_14350.1.exon2drCajCajn.Asha.2.0.Cc_v2.0_14350.1.exon2Cajanus cajanexon
Cc_v2.0_14350.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_14350.1.exon1Cajanus cajanexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_14350.1drCajCajn.Asha.2.0.Cc_v2.0_14350.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_14350.1drCajCajn.Asha.2.0.Cc_v2.0_14350.1-proteinCajanus cajanpolypeptide


Homology
BLAST of Cc_v2.0_14350.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371HM81|A0A371HM81_MUCPR (Protein CROWDED NUCLEI 4 (Fragment) OS=Mucuna pruriens OX=157652 GN=CRWN4 PE=3 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 3.946e-112
Identity = 196/276 (71.01%), Postives = 209/276 (75.72%), Query Frame = 0
Query:   15 ETDANKKISNEFDTPFVPKSSYVSPPSPVQSSWIKRCTELIFRRSPAKLLVHGDDKAVVS--RISNYGNGQKHSMDGKSFDNVGKRQQRRFSFGEPKVILEVPSPAKDINGVNDFESEIKKDVNRTVTLLSDGCHVRKWKRGRGNFRIGDPLQDPRQNKKLR-LEQPIENPLDQISTDGTCSAIPTQSDVSKVHQLSILSNQTLGNSEGAHVVMVDKTIHVSEVTSEMIDAVSVCNQESKNHLHNPTVGIHKFNLHGNKTDQSNSQIKEMAIPCGS 287
            ETD NK ISN FDTPFV KSS VSPPSPV  SWIKRCTE +FRRSP KLLVH DDKAVVS   ISN   GQKH  + KS DNVG+RQQRR SFGE KVILEVPS A+D N V+DFESEIKK+VNRTV+LLSDGCHV KWKRGRGNF IGDPLQD RQNKKLR  EQPIENPLDQ++   T SAIPTQSDVSKV QLSILSNQTLGN EG  VVMVDK IHVSE                     N T+G+ K +L GNK DQSNSQI E+ IPCGS
Sbjct:  192 ETDDNK-ISNGFDTPFVRKSSVVSPPSPVHCSWIKRCTEQVFRRSPEKLLVHDDDKAVVSVSHISNVSYGQKHLTNSKSLDNVGERQQRRLSFGEAKVILEVPSLAED-NRVSDFESEIKKNVNRTVSLLSDGCHVSKWKRGRGNFGIGDPLQDTRQNKKLRSEEQPIENPLDQVT---TSSAIPTQSDVSKVQQLSILSNQTLGNPEGTRVVMVDKVIHVSE--------------------RNSTIGVDKCDLLGNKIDQSNSQIIEIDIPCGS 442          
BLAST of Cc_v2.0_14350.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6A4PC79|A0A6A4PC79_LUPAL (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr16g0379031 PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.611e-70
Identity = 141/234 (60.26%), Postives = 162/234 (69.23%), Query Frame = 0
Query:   22 ISNEFDTPFVPKSSYVSPPSPVQSSWIKRCTELIFRRSPAKLLVHGDDKAVVSRISNYGNGQKHSMDGKSFDNVGKRQQRRFSFGEPKVILEVPSPAKDINGVNDFESEIKKDVN-RTVTLLSDGCHVRKWKRGRGNF--RIGDPLQDPRQNKKLRL-EQPIENPLDQISTDGTCSAIPTQSDV--SKVHQLSILSNQTLGNSEGAHVVMVDKTIHVSEVTSEMIDAVSVCNQE 249
            ISN FDTPF+ +SS  SP SP + SWIKRCTELIF+ S  K L+  +DKAVVS   N  NG+K   +     NV KRQQ RF   EPKVILEVPSP +D+N  +DF SEIKKDV  + V+LLSDG HV + KRG  N    + D L + RQNKKLR  EQP EN L Q     TCS IPTQSDV  SKV QLS+LSNQT GN+EG  VVMVDK IH+SEVTSE +DA+ V NQE
Sbjct:  781 ISNGFDTPFMHESSVASPLSPNRFSWIKRCTELIFKHSSEKPLMDNEDKAVVSDTCNVSNGKKLLTNDIPLGNVSKRQQMRFYIEEPKVILEVPSPVEDVNRASDFVSEIKKDVKGKNVSLLSDGSHVGRPKRGSENLTTEVEDSLLNARQNKKLRAEEQPYENHLYQ---GTTCSVIPTQSDVSKSKVQQLSLLSNQTEGNTEGTPVVMVDKVIHLSEVTSEKVDAIIVPNQE 1011          
BLAST of Cc_v2.0_14350.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4P1QRI2|A0A4P1QRI2_LUPAN (Nuclear matrix constituent protein 1-like protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_00964 PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 8.002e-64
Identity = 142/241 (58.92%), Postives = 165/241 (68.46%), Query Frame = 0
Query:   15 ETDANKKISNEFDTPFVPKSSYVSPPSPVQSSWIKRCTELIFRRSPAKLLVHGDDKAVVSRISNYGNGQKHSMDGKSFDNVGKRQQRRFSFGEPKVILEVPSPAKDINGVNDFESEIKKDVN-RTVTLLSDGCHVRKWKRGRGNF--RIGDPLQDPRQNKKLRL-EQPIENPLDQISTDGTCSAIPTQSD--VSKVHQLSILSNQTLGNSEGAHVVMVDKTIHVSEVTSEMIDAVSVCNQE 249
            E DA   IS+ FDTPF+ +SS  SP SP + SW+KRCTELIFR S  K L+  +DKAVVS   N  NGQK   +     NV KRQQ RFS  EPKVILEVPSP +D+N  +DF SE+KKDV  + V+LLSDG HV + KRG  NF   +GD L + RQNKKLR  EQ  EN L Q +   TCS IPTQSD   SKV QLS+LSNQT  N+EG  VVMVDK IH+SE TSE +DA+ V NQE
Sbjct:  775 EMDATH-ISDGFDTPFMHESSVASPLSPNRFSWVKRCTELIFRHSSEKPLMDNEDKAVVSDTYNVSNGQKLLTNDIPLSNVSKRQQTRFSIEEPKVILEVPSPVEDVNRASDFGSEVKKDVKGKNVSLLSDGRHVGRPKRGSENFTTEVGDSLLNARQNKKLRAEEQRYENHLYQGT---TCSVIPTQSDGSKSKVQQLSLLSNQTERNTEGTAVVMVDKVIHLSEATSEKVDAIIVPNQE 1011          
BLAST of Cc_v2.0_14350.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D5AMQ6|A0A9D5AMQ6_PEA (Nuclear matrix constituent protein 1-like protein OS=Pisum sativum OX=3888 GN=KIW84_042474 PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.285e-63
Identity = 136/283 (48.06%), Postives = 175/283 (61.84%), Query Frame = 0
Query:   22 ISNEFDTPFVPKSSYVSPPSPVQSSWIKRCTELIFRRSPAKLLVHGDDKAVVSRISNYGNGQKHSMDGKSFDNVGKRQQRRFSFGEPKVILEVPSPAKDINGVNDFESEIKKDVNRTVTLLSDGCHVRKWKRGRGNF--RIGDPLQDPRQNKKLR-LEQPIENPLDQISTDGTCSAIPTQSDVSKVHQLSILSNQTLGNSEGAHVVMVDKTIHVSEVTSEMIDAVSVCNQESKNHLHNPTVGIHKFNLHGNKTDQSNSQIKEMAIPCGSSIFAKLEEICEGNN 301
            ISNEF TPFV  SS VSPPS  + SWIKRCTELIFR SP   L+  ++  ++S  +N  NGQ H  + K   N    QQ  FSFGEPKVI+EVPS   + +  ++FES + KDVN   T  SD   + + KR RGN   ++GDPL D  QNKK R LEQ  +NPLDQ +T   C  + TQSD+S++ Q+S  SN   GN+E   VV +DK IHVSEV SE +D +S+ NQE  ++L +PT+G+ ++NLH    DQSN           SS+    E IC+ NN
Sbjct:  694 ISNEFGTPFVQNSSAVSPPSAARFSWIKRCTELIFRNSPDTPLMKKENSPLLSDKNNVSNGQTHLDNDKPLGNFSNGQQMEFSFGEPKVIVEVPSRDGNASRTSEFES-VTKDVN-GKTAFSDERQMGRGKRSRGNLINKVGDPLVDVVQNKKPRALEQMAKNPLDQGTT--YC-VLSTQSDISEIQQVSTTSNHKHGNTEETRVVTIDKVIHVSEVVSEKVDTLSIPNQEPGDNLQSPTLGVCQYNLHRETIDQSN-----------SSVLENKEGICKENN 960          
BLAST of Cc_v2.0_14350.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D5ASM2|A0A9D5ASM2_PEA (Protein CROWDED NUCLEI 4 OS=Pisum sativum OX=3888 GN=KIW84_042474 PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 3.019e-63
Identity = 136/283 (48.06%), Postives = 175/283 (61.84%), Query Frame = 0
Query:   22 ISNEFDTPFVPKSSYVSPPSPVQSSWIKRCTELIFRRSPAKLLVHGDDKAVVSRISNYGNGQKHSMDGKSFDNVGKRQQRRFSFGEPKVILEVPSPAKDINGVNDFESEIKKDVNRTVTLLSDGCHVRKWKRGRGNF--RIGDPLQDPRQNKKLR-LEQPIENPLDQISTDGTCSAIPTQSDVSKVHQLSILSNQTLGNSEGAHVVMVDKTIHVSEVTSEMIDAVSVCNQESKNHLHNPTVGIHKFNLHGNKTDQSNSQIKEMAIPCGSSIFAKLEEICEGNN 301
            ISNEF TPFV  SS VSPPS  + SWIKRCTELIFR SP   L+  ++  ++S  +N  NGQ H  + K   N    QQ  FSFGEPKVI+EVPS   + +  ++FES + KDVN   T  SD   + + KR RGN   ++GDPL D  QNKK R LEQ  +NPLDQ +T   C  + TQSD+S++ Q+S  SN   GN+E   VV +DK IHVSEV SE +D +S+ NQE  ++L +PT+G+ ++NLH    DQSN           SS+    E IC+ NN
Sbjct:  783 ISNEFGTPFVQNSSAVSPPSAARFSWIKRCTELIFRNSPDTPLMKKENSPLLSDKNNVSNGQTHLDNDKPLGNFSNGQQMEFSFGEPKVIVEVPSRDGNASRTSEFES-VTKDVN-GKTAFSDERQMGRGKRSRGNLINKVGDPLVDVVQNKKPRALEQMAKNPLDQGTT--YC-VLSTQSDISEIQQVSTTSNHKHGNTEETRVVTIDKVIHVSEVVSEKVDTLSIPNQEPGDNLQSPTLGVCQYNLHRETIDQSN-----------SSVLENKEGICKENN 1049          
BLAST of Cc_v2.0_14350.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2YS45|A0A1S2YS45_CICAR (Protein CROWDED NUCLEI 4 OS=Cicer arietinum OX=3827 GN=LOC101500271 PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 6.436e-63
Identity = 140/284 (49.30%), Postives = 183/284 (64.44%), Query Frame = 0
Query:   22 ISNEFDTPFVPKSSYVSPPSPVQSSWIKRCTELIFRRSPAKLLVHGDDKAVVSRISNYGNGQKHSMDGKSFDNVGKRQQRRFSFGEPKVILEVPSPAKDINGVNDFESEIKKDVNRTVTLLSDGCHVRKWKRGRGNF--RIGDPLQDPRQNKKLRLEQPIEN-PLDQISTDGTCSAIPTQSDVSKVHQLSILSNQTLGNSEGAHVVMVDKTIHVSEVTSEMIDAVSVCNQESKNHLHNPTVGIHKFNLHGNKTDQSNSQIK-EMAIPCGSSIFAKLEEICEGNN 301
            ISN FDTP V KSS VSP +  + SWIKRCTELIFR SP   L+  ++  +VS  +   NGQKH  + +        QQ  FSFGEPKVI+EVPS  ++ +  ++FES + KDVNR  T  SD  HV + KRGRGN   ++GDPL+D  QNKK R E+ + N PLDQ +   TC  + T S+   + Q+S+ SNQT G  E   VVMVDK IHVSEVTSE +DA+ + NQES ++L + T+G+ +++LHG   DQ NS+ + E  +P GSSI    E IC+ NN
Sbjct:  786 ISNGFDTPLVQKSSGVSPRNDARFSWIKRCTELIFRNSPDTQLMKKENLPLVSDTNTDSNGQKHLENDQPLGGFSNEQQMGFSFGEPKVIVEVPSLDENASRTSEFES-VTKDVNRKTT-FSDERHVGRGKRGRGNLITKVGDPLEDLVQNKKPRAEERMANIPLDQGT---TCCVLSTSSE---IQQVSMPSNQTQGKIEETRVVMVDKVIHVSEVTSEKVDALIIPNQESGDNLQSSTLGVGQYHLHGETIDQPNSKTRSEEILPRGSSILENTEGICKENN 1061          
BLAST of Cc_v2.0_14350.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1K2H3|I1K2H3_SOYBN (Protein CROWDED NUCLEI 4 OS=Glycine max OX=3847 GN=100783880 PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 1.595e-62
Identity = 143/296 (48.31%), Postives = 180/296 (60.81%), Query Frame = 0
Query:   16 TDANKKISNEFDTPFVPKSSYVSPPSPVQSSWIKRCTELIFRRSPAKLLVHGDDKAVVSRISNYGNGQKHSMDGKSFDNVGKRQQRRFSFGEPKVILEVPSPAKDINGVNDFESEIKKDVNRTVTLLSDGCHVRKWKRGRGNF--RIGDPLQDPRQNKKLRLEQPIENPLDQISTDGTCSAIPTQSDVSKVHQLSILSNQTLGNSEGAHVVMVDKTIHVSEVTSEMIDAVSVCNQESKNHLHNPTVGIHKFNLHGNKTDQSNSQIKEMAI-PCGSSIFAKLEEICEGNNSGPVPEH 308
            T    KI+N FDTP V KS  VSPPSPV+ SWIKRCTELIFR SP K L   +D  + S   N  NG+++S + +S  N+GK QQ  F+F EPKVI+EVPS   D    ++ ESE K    ++  LL DG H  + KRGRGN   ++GDPL D  QNKK R EQ  E                 QS VSKV Q+   SNQT GN+E   VVMVDK IHVSEVTSE +DA+ + +QE ++++ +PT G  +  LHG   D+SNS+ ++  I PC SS+    EEI +GNN   V EH
Sbjct:  771 TQGGDKINNGFDTPLVQKSP-VSPPSPVRFSWIKRCTELIFRNSPEKPLERNEDSLMGSDTGNVCNGKQYSENDESLGNIGKGQQIGFAFEEPKVIVEVPS--LDDARRSEIESEAKDVNGKSALLLPDGHHAGRRKRGRGNVTDKVGDPLVDVGQNKKSRAEQSNEK---------------VQSGVSKVQQVLTSSNQTQGNTEETRVVMVDKVIHVSEVTSEKLDALPILSQEPRDNMQSPTFGADQCILHGETIDRSNSKTRQEDILPCASSVLGSTEEISKGNND-QVSEH 1047          
BLAST of Cc_v2.0_14350.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2S339|A0A0B2S339_GLYSO (Protein CROWDED NUCLEI 4 isoform A OS=Glycine soja OX=3848 GN=D0Y65_011947 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.282e-61
Identity = 141/296 (47.64%), Postives = 179/296 (60.47%), Query Frame = 0
Query:   16 TDANKKISNEFDTPFVPKSSYVSPPSPVQSSWIKRCTELIFRRSPAKLLVHGDDKAVVSRISNYGNGQKHSMDGKSFDNVGKRQQRRFSFGEPKVILEVPSPAKDINGVNDFESEIKKDVNRTVTLLSDGCHVRKWKRGRGNF--RIGDPLQDPRQNKKLRLEQPIENPLDQISTDGTCSAIPTQSDVSKVHQLSILSNQTLGNSEGAHVVMVDKTIHVSEVTSEMIDAVSVCNQESKNHLHNPTVGIHKFNLHGNKTDQSNSQIKEMAI-PCGSSIFAKLEEICEGNNSGPVPEH 308
            T    KI+  FDTP V KS  VSPPSPV+ SWIKRCTELIFR SP K L   +D  + S   N  NG+++S + +S  N+GK QQ  F+F EPKVI+EVPS   D    ++ ESE K    ++  L  DG H  + KRGRGN   ++GDPL D  QNKK R EQ  E                 QS VSKV Q+ + SNQT GN+E   VVMVDK IHVSEVTSE +DA+ + +QE ++++ +PT G  +  LHG   D+SNS+ ++  I PC SS+    EEI +GNN   V EH
Sbjct:  771 TQGGDKINYGFDTPLVQKSP-VSPPSPVRFSWIKRCTELIFRNSPEKPLERNEDSLMGSDTGNVCNGKQYSENDESLGNIGKGQQIGFAFEEPKVIVEVPS--LDDARRSEIESEAKDVNGKSALLFPDGHHAGRRKRGRGNVTDKVGDPLVDVGQNKKSRAEQSNEK---------------VQSGVSKVQQVLMSSNQTQGNTEETRVVMVDKVIHVSEVTSEKLDALPILSQEPRDNMQSPTFGADQCILHGETIDRSNSKTRQEDILPCASSVLGSTEEISKGNND-QVSEH 1047          
BLAST of Cc_v2.0_14350.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KQ09|A0A8B8KQ09_ABRPR (Protein CROWDED NUCLEI 4 OS=Abrus precatorius OX=3816 GN=LOC113857875 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.729e-60
Identity = 154/300 (51.33%), Postives = 186/300 (62.00%), Query Frame = 0
Query:   14 TETDANKKISNEFD-TPFVPKSSYVSPPSPVQSSWIKRCTELIFRRSPAKLLVHGDDKAVVSRISNYGNGQKHSMDGKSFDNVGKRQQRRFSFGEPKVILEVPSPAKDINGVNDFESEIKKDVNRTVTLLSDGCHVRKWKRGRGNF--RIGDPLQDPRQNKKLRLE-QPIENPLDQISTDGTCSAIPTQSDVSKVHQLSILSNQTLGNSEGAHVVMVDKTIHVSEVTSEMIDAVSVCNQESKNHLHNPTVGIHKFNLHGNKTDQSNSQIKEMAI-PCGSSIFAKLEEICEGNNSGPVPEH 308
            T T A   IS  FD TP V KSS VSPPSPV+ SWIKRC E+IFR SP K L+   D  +VS   N  NGQ++    K   N  K QQ  F+  EPKVI+EVPS  ++ N  N+FESE K    +T  L SD   V + KRGRGN   + GDPL D  QNKK R E Q  ENPLDQ      C  I TQSDV  V +L + SNQ LG +E   VVM+DK IHVSEVTSE +DA+ + NQE +++L NPT G+ + NLHG   DQSN++ ++  I PC SS+    EEI +GNN G V EH
Sbjct:  768 TRTQAGDNISKGFDDTPTVQKSSVVSPPSPVRFSWIKRCREMIFRNSPEKQLMRKVDSPLVSDSGNISNGQENLEIDKPLGNFSKGQQMGFACEEPKVIVEVPSRDENANRTNEFESETKDVNGKTALLFSDEHPVGRRKRGRGNLTNKAGDPLVDLGQNKKSRAEDQTNENPLDQ---GPPCCVISTQSDVLDVPKL-MPSNQALGITEETRVVMIDKVIHVSEVTSEKVDALIIPNQEPRDNLQNPTSGVGQCNLHGETIDQSNAKSRQEDIFPCASSVLGSTEEISKGNN-GQVSEH 1062          
BLAST of Cc_v2.0_14350.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6NUZ7|A0A2Z6NUZ7_TRISU (Protein CROWDED NUCLEI 4 OS=Trifolium subterraneum OX=3900 GN=TSUD_183380 PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.349e-59
Identity = 129/283 (45.58%), Postives = 173/283 (61.13%), Query Frame = 0
Query:   22 ISNEFDTPFVPKSSYVSPPSPVQSSWIKRCTELIFRRSPAKLLVHGDDKAVVSRISNYGNGQKHSMDGKSFDNVGKRQQRRFSFGEPKVILEVPSPAKDINGVNDFESEIKKDVNRTVTLLSDGCHVRKWKRGRGNF--RIGDPLQDPRQNKKLRLEQPIENPLDQISTDGTCSAIPTQSDVSKVHQLSILSNQTLGNSEGAHVVMVDKTIHVSEVTSEMIDAVSVCNQESKNHLHNPTVGIHKFNLHGNKTDQSNSQIK-EMAIPCGSSIFAKLEEICEGNN 301
            I+N FDTPFV KS  VSP S  + SWIKRC ELIFR S    L+  ++  + S  +N  NGQKH  + K   N    QQ  FSFGEPKVI+EVPS   + +  ++FES + KDVN      SD   V + KRGRGN    +GD L D  QNKK R E+ +       +T  T   + TQS++S++ Q   +S+   G +E A VVM+DK IHVSEVTSE +DA+ + N+E  ++L +PT+G+ ++NLH    DQSNS+ + E  +PCGSS+    E IC+ NN
Sbjct:  709 INNGFDTPFVQKSLGVSPHSAARFSWIKRCKELIFRNSSDTPLMKKENLPLSSNTNNASNGQKHFENDKPLGNFSNGQQLGFSFGEPKVIVEVPSRDGNASRTSEFES-VTKDVNGKT--FSDERQVGRGKRGRGNLITEVGDSLVDLAQNKKPRAEERMAKKTSDPAT--TYRVLSTQSEISEIQQ---VSSHKQGKTEEARVVMIDKVIHVSEVTSEKVDALIIPNKELGDNLQSPTLGVCQYNLHKETIDQSNSKTRSEEILPCGSSVLENTEGICKENN 983          
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_14350.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A371HM81|A0A371HM81_MUCPR3.946e-11271.01Protein CROWDED NUCLEI 4 (Fragment) OS=Mucuna prur... [more]
tr|A0A6A4PC79|A0A6A4PC79_LUPAL1.611e-7060.26Uncharacterized protein OS=Lupinus albus OX=3870 G... [more]
tr|A0A4P1QRI2|A0A4P1QRI2_LUPAN8.002e-6458.92Nuclear matrix constituent protein 1-like protein ... [more]
tr|A0A9D5AMQ6|A0A9D5AMQ6_PEA2.285e-6348.06Nuclear matrix constituent protein 1-like protein ... [more]
tr|A0A9D5ASM2|A0A9D5ASM2_PEA3.019e-6348.06Protein CROWDED NUCLEI 4 OS=Pisum sativum OX=3888 ... [more]
tr|A0A1S2YS45|A0A1S2YS45_CICAR6.436e-6349.30Protein CROWDED NUCLEI 4 OS=Cicer arietinum OX=382... [more]
tr|I1K2H3|I1K2H3_SOYBN1.595e-6248.31Protein CROWDED NUCLEI 4 OS=Glycine max OX=3847 GN... [more]
tr|A0A0B2S339|A0A0B2S339_GLYSO2.282e-6147.64Protein CROWDED NUCLEI 4 isoform A OS=Glycine soja... [more]
tr|A0A8B8KQ09|A0A8B8KQ09_ABRPR3.729e-6051.33Protein CROWDED NUCLEI 4 OS=Abrus precatorius OX=3... [more]
tr|A0A2Z6NUZ7|A0A2Z6NUZ7_TRISU4.349e-5945.58Protein CROWDED NUCLEI 4 OS=Trifolium subterraneum... [more]
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BLAST of Cc_v2.0_14350.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Cc_v2.0_14350.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_14350.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_14350.1; Name=Cc_v2.0_14350.1; organism=Cajanus cajan; type=mRNA; length=930bp
ATGCATTGCATGAAAAAACCAGTGTTCAAATTCATCTACACTGAAACAGA
TGCTAATAAGAAGATCAGCAATGAGTTTGACACTCCATTTGTGCCGAAGT
CATCTTATGTTTCTCCTCCAAGCCCCGTTCAATCCTCATGGATCAAACGA
TGCACTGAACTAATTTTTAGGCGTTCCCCTGCGAAGCTACTCGTGCATGG
TGATGATAAGGCTGTAGTTTCTCGGATTTCAAATTATGGCAATGGTCAAA
AGCACTCGATGGATGGCAAATCTTTTGATAATGTTGGGAAGAGGCAGCAA
AGGAGATTTTCTTTTGGAGAACCGAAAGTAATTCTTGAAGTACCATCTCC
TGCTAAAGATATTAACGGAGTAAATGATTTTGAATCCGAAATTAAGAAAG
ATGTGAATAGAACTGTCACTTTACTTTCGGATGGATGTCACGTGAGAAAA
TGGAAAAGAGGTCGTGGGAACTTTAGAATTGGAGATCCACTTCAAGATCC
AAGGCAGAATAAGAAACTGCGATTAGAACAGCCAATCGAGAATCCTTTAG
ACCAGATCAGTACTGACGGTACATGCAGTGCAATTCCGACCCAATCAGAT
GTATCAAAGGTTCATCAGCTGTCAATATTATCAAATCAAACACTAGGGAA
CTCTGAAGGTGCTCATGTAGTGATGGTAGATAAAACTATACATGTATCAG
AAGTAACTTCCGAGATGATTGATGCTGTCAGTGTCTGCAATCAAGAATCA
AAGAATCATTTGCATAATCCTACAGTTGGAATTCACAAATTCAATCTTCA
TGGGAACAAAACTGATCAATCAAATTCTCAAATTAAAGAGATGGCTATAC
CTTGTGGATCCAGTATTTTCGCAAAATTGGAAGAAATATGCGAAGGAAAC
AACAGCGGACCAGTTCCGGAGCATCTATAG
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_14350.1

>drCajCajn.Asha.2.0.Cc_v2.0_14350.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_14350.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_14350.1; organism=Cajanus cajan; type=polypeptide; length=309bp
MHCMKKPVFKFIYTETDANKKISNEFDTPFVPKSSYVSPPSPVQSSWIKR
CTELIFRRSPAKLLVHGDDKAVVSRISNYGNGQKHSMDGKSFDNVGKRQQ
RRFSFGEPKVILEVPSPAKDINGVNDFESEIKKDVNRTVTLLSDGCHVRK
WKRGRGNFRIGDPLQDPRQNKKLRLEQPIENPLDQISTDGTCSAIPTQSD
VSKVHQLSILSNQTLGNSEGAHVVMVDKTIHVSEVTSEMIDAVSVCNQES
KNHLHNPTVGIHKFNLHGNKTDQSNSQIKEMAIPCGSSIFAKLEEICEGN
NSGPVPEHL
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mRNA from alignment at CcLG06_v2.0:30752912..30754800-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_14350.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_14350.1; Name=Cc_v2.0_14350.1; organism=Cajanus cajan; type=mRNA; length=1889bp; location=Sequence derived from: CcLG06_v2.0:30752912..30754800- (Cajanus cajan
ATGCATTGCATGAAAAAACCAGTGTTCAAATTCATCTACACTGTATCTAT GTAGATATTTGCTTCCACTCTGCCAGCAAAATGATCAAAAGAATATATTG TAAAATTTCATCTTAAAACCAATTGGCATCAAGTGAAGTTGCCCAATAGA TACTCCCTCCGTTTTTTATTCATAATCGTTTCAGCATTATTTTTTTGTTT TTTTTCATTGTCACTTTTCTAAAATCAATGACTTATTAATTTTCTTTTTC ATTTTTACCCTTGATAATTAATGTATGTTAGCACGAGTTGGAAATTCTGT CGAGGGAACTAAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNTGCTGGCCGCCTGCCACAGCTGCCCACAGCTGTCT AACAGTGGGCTCTTGAGCATGATGGTCATTTAAATTCCCCTAAGGAAACA GATGCTAATAAGAAGATCAGCAATGAGTTTGACACTCCATTTGTGCCGAA GTCATCTTATGTTTCTCCTCCAAGCCCCGTTCAATCCTCATGGATCAAAC GATGCACTGAACTAATTTTTAGGCGTTCCCCTGCGAAGCTACTCGTGCAT GGTGATGATAAGGCTGTAGTTTCTCGGATTTCAAATTATGGCAATGGTCA AAAGCACTCGATGGATGGCAAATCTTTTGATAATGTTGGGAAGAGGCAGC AAAGGAGATTTTCTTTTGGAGAACCGAAAGTAATTCTTGAAGTACCATCT CCTGCTAAAGATATTAACGGAGTAAATGATTTTGAATCCGAAATTAAGAA AGATGTGAATAGAACTGTCACTTTACTTTCGGATGGATGTCACGTGAGAA AATGGAAAAGAGGTCGTGGGAACTTTAGAATTGGAGATCCACTTCAAGAT CCAAGGCAGAATAAGAAACTGCGATTAGAACAGCCAATCGAGAATCCTTT AGACCAGATCAGTACTGACGGTACATGCAGGTACGGCCCTGGTTATCTAT CTATCTATATATAATTTAAGATATAGATAGTTATTATATGTAGTTGCCCT ATGGATTTTGAAGTTATCTATTGATTTTTATTTTCAGTGCAATTCCGACC CAATCAGATGTATCAAAGGTTCATCAGCTGTCAATATTATCAAATCAAAC ACTAGGGAACTCTGAAGGTGCTCATGTAGTGATGGTAGATAAAACTATAC ATGTATCAGAAGTAACTTCCGAGATGATTGATGCTGTCAGTGTCTGCAAT CAAGAATCAAAGAATCATTTGCATAATCCTACAGTTGGAATTCACAAATT CAATCTTCATGGGAACAAAACTGATCAATCAAATTCTCAAATTAAAGAGA TGGCTATACCTTGTGGATCCAGTATTTTCGCAAAATTGGAAGAAATATGC GAAGGAAACAACAGCGGACCAGTTCCGGAGCATCTATAG
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Coding sequence (CDS) from alignment at CcLG06_v2.0:30752912..30754800-

>drCajCajn.Asha.2.0.Cc_v2.0_14350.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_14350.1; Name=Cc_v2.0_14350.1; organism=Cajanus cajan; type=CDS; length=930bp; location=Sequence derived from: CcLG06_v2.0:30752912..30754800- (Cajanus cajan
ATGCATTGCATGAAAAAACCAGTGTTCAAATTCATCTACACTGAAACAGA
TGCTAATAAGAAGATCAGCAATGAGTTTGACACTCCATTTGTGCCGAAGT
CATCTTATGTTTCTCCTCCAAGCCCCGTTCAATCCTCATGGATCAAACGA
TGCACTGAACTAATTTTTAGGCGTTCCCCTGCGAAGCTACTCGTGCATGG
TGATGATAAGGCTGTAGTTTCTCGGATTTCAAATTATGGCAATGGTCAAA
AGCACTCGATGGATGGCAAATCTTTTGATAATGTTGGGAAGAGGCAGCAA
AGGAGATTTTCTTTTGGAGAACCGAAAGTAATTCTTGAAGTACCATCTCC
TGCTAAAGATATTAACGGAGTAAATGATTTTGAATCCGAAATTAAGAAAG
ATGTGAATAGAACTGTCACTTTACTTTCGGATGGATGTCACGTGAGAAAA
TGGAAAAGAGGTCGTGGGAACTTTAGAATTGGAGATCCACTTCAAGATCC
AAGGCAGAATAAGAAACTGCGATTAGAACAGCCAATCGAGAATCCTTTAG
ACCAGATCAGTACTGACGGTACATGCAGTGCAATTCCGACCCAATCAGAT
GTATCAAAGGTTCATCAGCTGTCAATATTATCAAATCAAACACTAGGGAA
CTCTGAAGGTGCTCATGTAGTGATGGTAGATAAAACTATACATGTATCAG
AAGTAACTTCCGAGATGATTGATGCTGTCAGTGTCTGCAATCAAGAATCA
AAGAATCATTTGCATAATCCTACAGTTGGAATTCACAAATTCAATCTTCA
TGGGAACAAAACTGATCAATCAAATTCTCAAATTAAAGAGATGGCTATAC
CTTGTGGATCCAGTATTTTCGCAAAATTGGAAGAAATATGCGAAGGAAAC
AACAGCGGACCAGTTCCGGAGCATCTATAG
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