Cc_v2.0_19188.1

Transcript Overview
NameCc_v2.0_19188.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_19188.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length501
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG08_v2.0chromosomeCcLG08_v2.0:49767517..49768769 +Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjccaL137Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0220Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL302Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0413Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0575Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0850Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL1109Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL066Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carccaL321Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR677Pisum sativum Cameor genome v1aPisum sativum
ccapsR682Pisum sativum Cameor genome v1aPisum sativum
carccaL620Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavrvR644Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR646Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR665Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR673Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR659Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavfhR686Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavfhR691Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR744Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR693Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR782Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavssR722Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR773Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccccaL0661Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL0917Cajanus cajan Asha genome v1.0Cajanus cajan
ccavumR709Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR578Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavuR594Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR753Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR604Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavunR498Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccavunR516Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccavunR525Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR750Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR775Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR801Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR812Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr06.1673Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigun06g129400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun06g129400.3Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Psat1g161320.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Hedin2.R1.1g432320.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
jg20036.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
jg39560.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vum_05G00977.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Hedin2.R1.4g197040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.Ca_v2.0_00932Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Phvul.006G117900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va09G050800.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_038201Cajanus cajan Asha genome v1.0Cajanus cajan
rna-KK1_004167Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_19188drCajCajn.Asha.2.0.Cc_v2.0_19188Cajanus cajangene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_19188.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_19188.1.exon1Cajanus cajanexon
Cc_v2.0_19188.1.exon2drCajCajn.Asha.2.0.Cc_v2.0_19188.1.exon2Cajanus cajanexon
Cc_v2.0_19188.1.exon3drCajCajn.Asha.2.0.Cc_v2.0_19188.1.exon3Cajanus cajanexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_19188.1.utr5p1drCajCajn.Asha.2.0.Cc_v2.0_19188.1.utr5p1Cajanus cajanfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_19188.1drCajCajn.Asha.2.0.cds.Cc_v2.0_19188.1Cajanus cajanCDS
cds.Cc_v2.0_19188.1drCajCajn.Asha.2.0.cds.Cc_v2.0_19188.1_2Cajanus cajanCDS
cds.Cc_v2.0_19188.1drCajCajn.Asha.2.0.cds.Cc_v2.0_19188.1_3Cajanus cajanCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_19188.1.utr3p1drCajCajn.Asha.2.0.Cc_v2.0_19188.1.utr3p1Cajanus cajanthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_19188.1drCajCajn.Asha.2.0.Cc_v2.0_19188.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_19188.1drCajCajn.Asha.2.0.Cc_v2.0_19188.1-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_19188.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151RDJ8|A0A151RDJ8_CAJCA (Protein TAPETUM DETERMINANT 1 OS=Cajanus cajan OX=3821 GN=KK1_038201 PE=4 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 2.376e-119
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 
Query:    1 MTITNSFLHIIFVCFMMPLFVFSDEGMHSGSSAHILNSFREDRNGSITVSVKAEHAYSASRKIWLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKSAKFC 166
            MTITNSFLHIIFVCFMMPLFVFSDEGMHSGSSAHILNSFREDRNGSITVSVKAEHAYSASRKIWLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKSAKFC
Sbjct:    1 MTITNSFLHIIFVCFMMPLFVFSDEGMHSGSSAHILNSFREDRNGSITVSVKAEHAYSASRKIWLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKSAKFC 166
[Close]
BLAST of Cc_v2.0_19188.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445GTD7|A0A445GTD7_GLYSO (TPD1 protein-like 1 OS=Glycine soja OX=3848 GN=D0Y65_040876 PE=4 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 2.167e-93
Identity = 134/166 (80.72%), Postives = 146/166 (87.95%), Query Frame = 0 
Query:    1 MTITNSFLHIIFVCFMMPLFVFSDEGMHSGSSAHILNSFREDRNGSITVSVKAEHAYSASRKIWLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKSAKFC 166
            MTITNS   IIF+CFMMPLFVF DEG HSG S   L+S  ED+NGSITVS+K EHA+SASRK WLHG+CTSKDISISQS++ST GIPQFIVQIVN CVSGCAP DIHLHCG FASAR+VNPRLFKR+SYDDCLVN GNPLA +QIIRFTYSN+F YPLAFKSAKFC
Sbjct:    3 MTITNSCPLIIFLCFMMPLFVFCDEGTHSGPSTQSLHSSHEDKNGSITVSMKVEHAHSASRKFWLHGTCTSKDISISQSQTSTPGIPQFIVQIVNNCVSGCAPSDIHLHCGMFASARMVNPRLFKRISYDDCLVNGGNPLAPSQIIRFTYSNTFSYPLAFKSAKFC 168
[Close]
BLAST of Cc_v2.0_19188.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1MGE9|I1MGE9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100796799 PE=4 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 2.167e-93
Identity = 134/166 (80.72%), Postives = 146/166 (87.95%), Query Frame = 0 
Query:    1 MTITNSFLHIIFVCFMMPLFVFSDEGMHSGSSAHILNSFREDRNGSITVSVKAEHAYSASRKIWLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKSAKFC 166
            MTITNS   IIF+CFMMPLFVF DEG HSG S   L+S  ED+NGSITVS+K EHA+SASRK WLHG+CTSKDISISQS++ST GIPQFIVQIVN CVSGCAP DIHLHCG FASAR+VNPRLFKR+SYDDCLVN GNPLA +QIIRFTYSN+F YPLAFKSAKFC
Sbjct:    3 MTITNSCPLIIFLCFMMPLFVFCDEGTHSGPSTQSLHSSHEDKNGSITVSMKVEHAHSASRKFWLHGTCTSKDISISQSQTSTPGIPQFIVQIVNNCVSGCAPSDIHLHCGMFASARMVNPRLFKRISYDDCLVNGGNPLAPSQIIRFTYSNTFSYPLAFKSAKFC 168
[Close]
BLAST of Cc_v2.0_19188.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XDR8|A0A1S2XDR8_CICAR (TPD1 protein homolog 1-like OS=Cicer arietinum OX=3827 GN=LOC101512022 PE=4 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.463e-92
Identity = 131/166 (78.92%), Postives = 144/166 (86.75%), Query Frame = 0 
Query:    1 MTITNSFLHIIFVCFMMPLFVFSDEGMHSGSSAHILNSFREDRNGSITVSVKAEHAYSASRKIWLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKSAKFC 166
            MTIT SF H+ F+C  MPL VFSD  MHSG S  IL+S  ED+NGSITVS KAEHA+S SRK W HGSCT +DISISQSK +TSGIPQ+IVQIVNTCVSGCAP DIHLHCGWFASARI+NPRLFKRLS+DDCLVN GNPL S+QI+RFTYSNSFMYPLAFKSA+FC
Sbjct:    1 MTITMSF-HLFFLCITMPLLVFSDVEMHSGPSTQILHSIHEDKNGSITVSEKAEHAHSTSRKFWFHGSCTKRDISISQSKGTTSGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARIINPRLFKRLSFDDCLVNGGNPLTSSQIVRFTYSNSFMYPLAFKSARFC 165
[Close]
BLAST of Cc_v2.0_19188.1 vs. ExPASy TrEMBL (2024)
Match: tr|C6TBP1|C6TBP1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.685e-91
Identity = 132/166 (79.52%), Postives = 145/166 (87.35%), Query Frame = 0 
Query:    1 MTITNSFLHIIFVCFMMPLFVFSDEGMHSGSSAHILNSFREDRNGSITVSVKAEHAYSASRKIWLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKSAKFC 166
            MTITNS   IIF+CF+MPLFVF DEG HSG S   L+S  ED+NGSITVS+K EHA+SASRK WLHG+CTSKDISISQS++ T GIPQFIVQIVN CVSGCAP DIHLHCG FASAR+VNPRLFKR+SYDDCLVN GNPLA +QIIRFTYSN+F YPLAFKSAKFC
Sbjct:    3 MTITNSCPLIIFLCFVMPLFVFCDEGTHSGPSTQSLHSSHEDKNGSITVSMKVEHAHSASRKFWLHGTCTSKDISISQSQTFTPGIPQFIVQIVNNCVSGCAPSDIHLHCGMFASARMVNPRLFKRISYDDCLVNGGNPLAPSQIIRFTYSNTFSYPLAFKSAKFC 168
[Close]
BLAST of Cc_v2.0_19188.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0R0GAI6|A0A0R0GAI6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=4 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 6.061e-91
Identity = 132/166 (79.52%), Postives = 144/166 (86.75%), Query Frame = 0 
Query:    1 MTITNSFLHIIFVCFMMPLFVFSDEGMHSGSSAHILNSFREDRNGSITVSVKAEHAYSASRKIWLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKSAKFC 166
            MTITNS   IIF+CFMMPLFVF DEG HSG S  IL+S  ED+N SITVS+K EHA+SASRK WLHG+CTSKDISISQS++ST GIPQFIVQIVN CVSGCAP DIH HCG FASAR+VNPRLFKR+S DDCLVN GNPLA +QIIRFTYSN+F YPLAFKSAKFC
Sbjct:    1 MTITNSCPLIIFLCFMMPLFVFCDEGTHSGPSTQILHSSHEDKNRSITVSMKVEHAHSASRKFWLHGTCTSKDISISQSQTSTPGIPQFIVQIVNNCVSGCAPSDIHFHCGMFASARMVNPRLFKRISCDDCLVNGGNPLAPSQIIRFTYSNTFSYPLAFKSAKFC 166
[Close]
BLAST of Cc_v2.0_19188.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445GV80|A0A445GV80_GLYSO (TPD1 protein-like 1 OS=Glycine soja OX=3848 GN=D0Y65_041312 PE=4 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 7.484e-91
Identity = 132/166 (79.52%), Postives = 144/166 (86.75%), Query Frame = 0 
Query:    1 MTITNSFLHIIFVCFMMPLFVFSDEGMHSGSSAHILNSFREDRNGSITVSVKAEHAYSASRKIWLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKSAKFC 166
            MTITNS   IIF+CFMMPLFVF DEG HSG S  IL+S  ED+N SITVS+K EHA+SASRK WLHG+CTSKDISISQS++ST GIPQFIVQIVN CVSGCAP DIH HCG FASAR+VNPRLFKR+S DDCLVN GNPLA +QIIRFTYSN+F YPLAFKSAKFC
Sbjct:    3 MTITNSCPLIIFLCFMMPLFVFCDEGTHSGPSTQILHSSHEDKNRSITVSMKVEHAHSASRKFWLHGTCTSKDISISQSQTSTPGIPQFIVQIVNNCVSGCAPSDIHFHCGMFASARMVNPRLFKRISCDDCLVNGGNPLAPSQIIRFTYSNTFSYPLAFKSAKFC 168
[Close]
BLAST of Cc_v2.0_19188.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371H9F4|A0A371H9F4_MUCPR (TPD1 protein-like 1 (Fragment) OS=Mucuna pruriens OX=157652 GN=TDL1 PE=4 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 4.579e-89
Identity = 144/172 (83.72%), Postives = 152/172 (88.37%), Query Frame = 0 
Query:    1 MTITNSFLHIIFVCFMMPLFVFSDEGMHS------GSSAHILNSFREDRNGSITVSVKAEHAYSASRKIWLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKSAKFC 166
            MTITNS   IIF+CFMMPLFVF DEGMHS      G S  IL SF +DRNGS+TVSVKA+HA+S  RK+WLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVS CAP DIHLHCGWFASARIVNPRLFKRLS+DDCLVN GNPLAS+QIIRFTYSNSFMYPLAFKSAKFC
Sbjct:    1 MTITNSCPLIIFLCFMMPLFVFCDEGMHSAYLMLAGPSTQILLSFHQDRNGSVTVSVKADHAHS--RKVWLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVSECAPRDIHLHCGWFASARIVNPRLFKRLSFDDCLVNGGNPLASSQIIRFTYSNSFMYPLAFKSAKFC 170
[Close]
BLAST of Cc_v2.0_19188.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7BN32|V7BN32_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G117900g PE=4 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 1.695e-88
Identity = 142/166 (85.54%), Postives = 149/166 (89.76%), Query Frame = 0 
Query:    1 MTITNSFLHIIFVCFMMPLFVFSDEGMHSGSSAHILNSFREDRNGSITVSVKAEHAYSASRKIWLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKSAKFC 166
            MTITNS   I+F+CF M  F+F DEGMHSG S  IL+SF+EDRNGSITVSVKAEHA  ASRK WLHGSCTSKDISISQS SSTSGIPQFIVQIVNTCVSGCAP DIHLHCGWFASARIVNPRLFKR+SYDDCLVN GNPLAS+QIIR TYSNSFMYPLAFKSAKFC
Sbjct:    1 MTITNSCPLILFLCFTMLPFLFCDEGMHSGQSNQILHSFQEDRNGSITVSVKAEHA--ASRKNWLHGSCTSKDISISQSTSSTSGIPQFIVQIVNTCVSGCAPRDIHLHCGWFASARIVNPRLFKRISYDDCLVNGGNPLASSQIIRITYSNSFMYPLAFKSAKFC 164
[Close]
BLAST of Cc_v2.0_19188.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8K3H3|A0A8B8K3H3_ABRPR (TPD1 protein homolog 1-like OS=Abrus precatorius OX=3816 GN=LOC113852241 PE=4 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 4.545e-87
Identity = 135/166 (81.33%), Postives = 150/166 (90.36%), Query Frame = 0 
Query:    1 MTITNSFLHIIFVCFMMPLFVFSDEGMHSGSSAHILNSFREDRNGSITVSVKAEHAYSASRKIWLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKSAKFC 166
            MTI NS L + F+CF+MP  VF D GMHSG S+ I++S  E++N SITVSVKAEHA+S+SRK WLHGSCT +DISISQSKSSTSGIPQFIVQIVNTCVSGC+P+DIHLHCGWFASARI+NPRLFKRLSYDDCLVN GNPLASTQIIRFTY+NSFMYPLAFKSAKFC
Sbjct:   10 MTIRNSCL-MFFMCFIMPFLVFCDVGMHSGPSSQIMHSHHENKNRSITVSVKAEHAHSSSRKFWLHGSCTQRDISISQSKSSTSGIPQFIVQIVNTCVSGCSPYDIHLHCGWFASARIINPRLFKRLSYDDCLVNGGNPLASTQIIRFTYANSFMYPLAFKSAKFC 174
[Close]
BLAST of Cc_v2.0_19188.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q1G3T1|TDL1_ARATH (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.101e-29
Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 0 
Query:   41 EDRNGSITVSVKA-------EHAYSASRKIWLH-----------GSCTSKDISISQSKSST--SGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKS 162
            E  N   ++++KA       E+  + SRK+ L              C+  DI + Q  ++   SG+P + V+I N+CVS C   +IH+ CGWF+S R+VNPR+F+RL YDDCLVN G PL   Q + F Y+NSF YPL+  S
Sbjct:   34 EGSNDRRSIALKARSFVSINENRTALSRKLLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVAS 175
[Close]
BLAST of Cc_v2.0_19188.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6TLJ2|TPD1_ARATH (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.220e-27
Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 0 
Query:   52 KAEHAYSASRKIWLHGSCTSKDISISQ--SKSSTSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLA 159
            K E +    R   +   C S DI ++Q  ++   +GIP ++V+I N C+SGC    IH++CGWF+SA+++NPR+FKR+ YDDCLVN G PL     + F Y+N+F Y L+
Sbjct:   63 KTERSVEPER---IGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLS 169
[Close]
BLAST of Cc_v2.0_19188.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8S6P9|TDL1B_ORYSJ (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.510e-24
Identity = 52/165 (31.52%), Postives = 88/165 (53.33%), Query Frame = 0 
Query:    1 MTITNSFLHIIFVCFMMPLFVFSDEGMHSGSSAHILNSFREDRNGSITVSVKAEHAYSASRKIWLH----GSCTSKDISISQSKSS--TSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLA 159
            M + +S   I+ +       V S E   S   +  LN  +        +++  +H+ +  R  W+      SC+ +++ + Q+ +    SGIP + V+I+N C + C  +D+H+ CG FASA +V+P  F+R+ ++DCLV  G  L  ++ + F YSNSF YPLA
Sbjct:    7 MRLASSVTIILLLLVASQALVVSGESSSSAMQSKTLNMNK-------LLNISEDHSPNGGRH-WMQRMQPDSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVC-TACTVYDVHISCGEFASAELVDPSQFQRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLA 162
[Close]
BLAST of Cc_v2.0_19188.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q2QR54|TDL1A_ORYSJ (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.630e-23
Identity = 43/106 (40.57%), Postives = 65/106 (61.32%), Query Frame = 0 
Query:   66 HGSCTSKDISISQSKSST--SGIPQFIVQIVNTCVSG------CAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKSA 163
             G   + DI+I Q +++   SG+P + V ++N C  G      CA   IH+ CGWF+S  +V+PR+F+RL +DDCL+N G PL + + + F Y+NSF Y L+   A
Sbjct:  112 DGCAGADDIAIYQGRATPLPSGVPAYTVDVMNRCAGGGGGDEECAIAGIHVRCGWFSSVSLVDPRVFRRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVA 217
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BLAST of Cc_v2.0_19188.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:11787351-11788103 FORWARD LENGTH=179)

HSP 1 Score: 109.768 bits (273), Expect = 1.143e-30
Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 0 
Query:   41 EDRNGSITVSVKA-------EHAYSASRKIWLH-----------GSCTSKDISISQSKSST--SGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKS 162
            E  N   ++++KA       E+  + SRK+ L              C+  DI + Q  ++   SG+P + V+I N+CVS C   +IH+ CGWF+S R+VNPR+F+RL YDDCLVN G PL   Q + F Y+NSF YPL+  S
Sbjct:   34 EGSNDRRSIALKARSFVSINENRTALSRKLLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVAS 175
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BLAST of Cc_v2.0_19188.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:11787351-11788103 FORWARD LENGTH=179)

HSP 1 Score: 109.768 bits (273), Expect = 1.143e-30
Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 0 
Query:   41 EDRNGSITVSVKA-------EHAYSASRKIWLH-----------GSCTSKDISISQSKSST--SGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKS 162
            E  N   ++++KA       E+  + SRK+ L              C+  DI + Q  ++   SG+P + V+I N+CVS C   +IH+ CGWF+S R+VNPR+F+RL YDDCLVN G PL   Q + F Y+NSF YPL+  S
Sbjct:   34 EGSNDRRSIALKARSFVSINENRTALSRKLLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVAS 175
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BLAST of Cc_v2.0_19188.1 vs. Araport11
Match: | (Symbols: TPD1 | TAPETUM DETERMINANT 1 | chr4:12838220-12839619 FORWARD LENGTH=176)

HSP 1 Score: 103.99 bits (258), Expect = 2.302e-28
Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 0 
Query:   52 KAEHAYSASRKIWLHGSCTSKDISISQ--SKSSTSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLA 159
            K E +    R   +   C S DI ++Q  ++   +GIP ++V+I N C+SGC    IH++CGWF+SA+++NPR+FKR+ YDDCLVN G PL     + F Y+N+F Y L+
Sbjct:   63 KTERSVEPER---IGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLS 169
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_19188.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151RDJ8|A0A151RDJ8_CAJCA2.376e-119100.00Protein TAPETUM DETERMINANT 1 OS=Cajanus cajan OX=... [more]
tr|A0A445GTD7|A0A445GTD7_GLYSO2.167e-9380.72TPD1 protein-like 1 OS=Glycine soja OX=3848 GN=D0Y... [more]
tr|I1MGE9|I1MGE9_SOYBN2.167e-9380.72Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A1S2XDR8|A0A1S2XDR8_CICAR2.463e-9278.92TPD1 protein homolog 1-like OS=Cicer arietinum OX=... [more]
tr|C6TBP1|C6TBP1_SOYBN1.685e-9179.52Uncharacterized protein OS=Glycine max OX=3847 PE=... [more]
tr|A0A0R0GAI6|A0A0R0GAI6_SOYBN6.061e-9179.52Uncharacterized protein OS=Glycine max OX=3847 PE=... [more]
tr|A0A445GV80|A0A445GV80_GLYSO7.484e-9179.52TPD1 protein-like 1 OS=Glycine soja OX=3848 GN=D0Y... [more]
tr|A0A371H9F4|A0A371H9F4_MUCPR4.579e-8983.72TPD1 protein-like 1 (Fragment) OS=Mucuna pruriens ... [more]
tr|V7BN32|V7BN32_PHAVU1.695e-8885.54Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A8B8K3H3|A0A8B8K3H3_ABRPR4.545e-8781.33TPD1 protein homolog 1-like OS=Abrus precatorius O... [more]
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BLAST of Cc_v2.0_19188.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 4
Match NameE-valueIdentityDescription
sp|Q1G3T1|TDL1_ARATH1.101e-2940.85TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=... [more]
sp|Q6TLJ2|TPD1_ARATH2.220e-2743.64Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thali... [more]
sp|Q8S6P9|TDL1B_ORYSJ4.510e-2431.52TPD1 protein homolog 1B OS=Oryza sativa subsp. jap... [more]
sp|Q2QR54|TDL1A_ORYSJ3.630e-2340.57TPD1 protein homolog 1A OS=Oryza sativa subsp. jap... [more]
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BLAST of Cc_v2.0_19188.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
|1.143e-3040.85Symbols: no symbol available | no full name availa... [more]
|1.143e-3040.85Symbols: no symbol available | no full name availa... [more]
|2.302e-2843.64Symbols: TPD1 | TAPETUM DETERMINANT 1 | chr4:12838... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040361Tapetum determinant 1PANTHERPTHR33184PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATEDcoord: 54..164

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_19188.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19188.1; Name=Cc_v2.0_19188.1; organism=Cajanus cajan; type=mRNA; length=501bp
ATGACCATCACAAACTCTTTTCTTCATATCATCTTCGTGTGCTTCATGAT
GCCCCTTTTTGTATTTAGTGATGAGGGAATGCATTCAGGATCTTCAGCAC
ATATTTTGAATTCTTTCCGTGAAGACAGAAACGGGTCCATAACAGTGTCA
GTGAAAGCAGAACATGCATATTCTGCCTCTAGAAAAATTTGGTTGCATGG
TTCTTGCACAAGCAAAGACATAAGCATCTCACAAAGCAAAAGTTCTACAT
CAGGAATACCACAGTTCATTGTGCAAATTGTTAACACCTGTGTTTCTGGA
TGTGCTCCTTTTGACATCCACCTCCACTGTGGCTGGTTTGCTTCTGCAAG
AATAGTGAACCCCAGATTGTTCAAGAGGCTCTCATATGATGATTGCTTGG
TGAATAGAGGGAACCCTTTAGCCTCTACTCAGATCATCAGATTCACATAT
TCCAATTCCTTCATGTACCCTCTTGCTTTTAAGAGTGCCAAATTTTGCTG
A
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_19188.1

>drCajCajn.Asha.2.0.Cc_v2.0_19188.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19188.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_19188.1; organism=Cajanus cajan; type=polypeptide; length=166bp
MTITNSFLHIIFVCFMMPLFVFSDEGMHSGSSAHILNSFREDRNGSITVS
VKAEHAYSASRKIWLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVSG
CAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTY
SNSFMYPLAFKSAKFC
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mRNA from alignment at CcLG08_v2.0:49767517..49768769+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_19188.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19188.1; Name=Cc_v2.0_19188.1; organism=Cajanus cajan; type=mRNA; length=1253bp; location=Sequence derived from: CcLG08_v2.0:49767517..49768769+ (Cajanus cajan
CATTCTTGTACATGTAGCACTAGGTAAGGGTCACCAACCCTACAAATCCC
CCTCCCCTCTCGCACCTTCAAAATTCATTCCTAAAATCTTTTGATTTTGA
GATTGAGTACTTGTTTGTGACGCAGAAAAACAGAGAAAGATAGTCATAGC
AGCATTCTGCAATTAACATGACCATCACAAACTCTTTTCTTCATATCATC
TTCGTGTGCTTCATGATGCCCCTTTTTGTATTTAGTGATGAGGGAATGCA
TTCAGGTACAAAAACAGAACCTCTTGCCTTTGGCTTTTTCTCTAATGATC
GTTATTCTTCCCGTCACCCTTAAGCTAGTATAATGTTGGCAGGATCTTCA
GCACATATTTTGAATTCTTTCCGTGAAGACAGAAACGGGTCCATAACAGT
GTCAGTGAAAGCAGAACATGCATATTCTGCCTCTAGAAAAATTTGGTTGC
ATGGTATGTATATgtgtgaaatttctctatttgtagtcttagtgcgtgtt
tggaaccaaatctacaacacggattatcgctatctttccacgttcaacag
aaacaataagttgcttcagaatcaattgaacctattgatgtgattttgtg
atgttgatccaaacatGCTTTTACTTCTCCAACTGAGATGAAAAAAATAT
TTTCCTTTCTTTATTTTTTTTTTGGCTCCATTTTGACCGTGGCTTTGATC
ATGATCACATTAGGTTCTTGCACAAGCAAAGACATAAGCATCTCACAAAG
CAAAAGTTCTACATCAGGAATACCACAGTTCATTGTGCAAATTGTTAACA
CCTGTGTTTCTGGATGTGCTCCTTTTGACATCCACCTCCACTGTGGCTGG
TTTGCTTCTGCAAGAATAGTGAACCCCAGATTGTTCAAGAGGCTCTCATA
TGATGATTGCTTGGTGAATAGAGGGAACCCTTTAGCCTCTACTCAGATCA
TCAGATTCACATATTCCAATTCCTTCATGTACCCTCTTGCTTTTAAGAGT
GCCAAATTTTGCTGAGTCCAAAATATATGTTTAAAAGTAGAATGAGAAAG
CATAGACTTCCAAAAATGATAACACCACCTTGTTGATATTAACCATTGCA
CTCTTGCTTTAGCTCCGACTCTCATTTTTTCTATGTAAATGTACATTTGT
TAAGCTACTATTCAATGATACAATGACTAGAGACTCCAATCCCTCAAAAG
AGAATTTCCATTTCATTGGGAATGTTGGAATGTTAAAGTTAAGAAAATGT
TTC
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Coding sequence (CDS) from alignment at CcLG08_v2.0:49767517..49768769+

>drCajCajn.Asha.2.0.Cc_v2.0_19188.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19188.1; Name=Cc_v2.0_19188.1; organism=Cajanus cajan; type=CDS; length=501bp; location=Sequence derived from: CcLG08_v2.0:49767517..49768769+ (Cajanus cajan
ATGACCATCACAAACTCTTTTCTTCATATCATCTTCGTGTGCTTCATGAT
GCCCCTTTTTGTATTTAGTGATGAGGGAATGCATTCAGGATCTTCAGCAC
ATATTTTGAATTCTTTCCGTGAAGACAGAAACGGGTCCATAACAGTGTCA
GTGAAAGCAGAACATGCATATTCTGCCTCTAGAAAAATTTGGTTGCATGG
TTCTTGCACAAGCAAAGACATAAGCATCTCACAAAGCAAAAGTTCTACAT
CAGGAATACCACAGTTCATTGTGCAAATTGTTAACACCTGTGTTTCTGGA
TGTGCTCCTTTTGACATCCACCTCCACTGTGGCTGGTTTGCTTCTGCAAG
AATAGTGAACCCCAGATTGTTCAAGAGGCTCTCATATGATGATTGCTTGG
TGAATAGAGGGAACCCTTTAGCCTCTACTCAGATCATCAGATTCACATAT
TCCAATTCCTTCATGTACCCTCTTGCTTTTAAGAGTGCCAAATTTTGCTG
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR040361TPD1