Cc_v2.0_19526.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cc_v2.0_19526.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371DZW2|A0A371DZW2_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_62635 PE=4 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 5.419e-27 Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 0 Query: 1 MDWGGDDWGSLSSKQSKRRMMSSRKVFDEVHGVSLGNVEKEKLLGVLRASSDANGKVQMSIVEAELKD 68
MDWGGDDW SL+SK + +R MSSRKVFDEVHG SLGNVEKEKLLG LRASSDANGKV++ I + EL++
Sbjct: 11 MDWGGDDWDSLTSKHNSKRRMSSRKVFDEVHGASLGNVEKEKLLGALRASSDANGKVKIKISKKELEE 78
BLAST of Cc_v2.0_19526.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86VSC2|A0AA86VSC2_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS19263 PE=4 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.958e-23 Identity = 56/97 (57.73%), Postives = 66/97 (68.04%), Query Frame = 0 Query: 1 MDWGGDDWGSLSSKQSKRRMMSSRKVFDEVHGVSLGNVEKEKLLGVLRASSDANGKVQMSIVEAEL-------KDGQKLGLAIAASWNYVKDYFSHT 90
M+WGGDDWGSLSS KRR MSS KVFDEVH +SL NVEKEKLLG LRASSDANGKV++ I + EL ++ ++LG + AS V H
Sbjct: 11 MNWGGDDWGSLSS--CKRRSMSSGKVFDEVHEMSLENVEKEKLLGALRASSDANGKVKIKISKKELAQLLGGKENNKQLGEEVHASAEQVLARLIHA 105
BLAST of Cc_v2.0_19526.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445GRT9|A0A445GRT9_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_040545 PE=4 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 6.603e-23 Identity = 48/67 (71.64%), Postives = 55/67 (82.09%), Query Frame = 0 Query: 1 MDWGGDDWGSLSSKQSKRRMMSSRKVFDEVHGVSLGNVEKEKLLGVLRASSDANGKVQMSIVEAELK 67
MDWGGDDWGSLSS + +R+ KVFDEVHG SLGNVEKEKLLG LRASSDANGKV++ I + EL+
Sbjct: 14 MDWGGDDWGSLSSSKKRRK----NKVFDEVHGESLGNVEKEKLLGALRASSDANGKVKIKISKKELE 76
BLAST of Cc_v2.0_19526.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1MFH0|I1MFH0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100796265 PE=4 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 6.603e-23 Identity = 48/67 (71.64%), Postives = 55/67 (82.09%), Query Frame = 0 Query: 1 MDWGGDDWGSLSSKQSKRRMMSSRKVFDEVHGVSLGNVEKEKLLGVLRASSDANGKVQMSIVEAELK 67
MDWGGDDWGSLSS + +R+ KVFDEVHG SLGNVEKEKLLG LRASSDANGKV++ I + EL+
Sbjct: 14 MDWGGDDWGSLSSSKKRRK----NKVFDEVHGESLGNVEKEKLLGALRASSDANGKVKIKISKKELE 76
BLAST of Cc_v2.0_19526.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XA95|A0A1S2XA95_CICAR (Uncharacterized protein LOC101497221 OS=Cicer arietinum OX=3827 GN=LOC101497221 PE=4 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.095e-22 Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 0 Query: 1 MDWGGDDWGSLSSKQSKRRMMSSRKVFDEVHGVSLGNVEKEKLLGVLRASSDANGKVQMSIVEAEL 66
M+W G+DWGSL+SKQ + M+S KVFDEVHG+SLGN+EKEKLLG LRASSDANGKV++ I + EL
Sbjct: 11 MEWAGEDWGSLTSKQKSK--MNSSKVFDEVHGLSLGNIEKEKLLGALRASSDANGKVKIKISKKEL 74
BLAST of Cc_v2.0_19526.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8K8N3|A0A8B8K8N3_ABRPR (Uncharacterized protein LOC113853203 OS=Abrus precatorius OX=3816 GN=LOC113853203 PE=4 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.327e-22 Identity = 50/68 (73.53%), Postives = 57/68 (83.82%), Query Frame = 0 Query: 1 MDWGGDDWGSLSSKQSKRRMMSSRKVFDEVHGVSLGNVEKEKLLGVLRASSDANGKVQMSIVEAELKD 68
MDWGGDDWGSLSSK KR+M S KVFDEV G+SLGNVEKE+LLG LRASSDANGKV++ I + EL +
Sbjct: 11 MDWGGDDWGSLSSKH-KRKM--SSKVFDEVDGLSLGNVEKERLLGALRASSDANGKVKIKISKKELAE 75
BLAST of Cc_v2.0_19526.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6NB19|A0A2Z6NB19_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_380660 PE=4 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.003e-21 Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 0 Query: 1 MDWGGDDWGSLSSKQSKRRMMSSRKVFDEVHGVSLGNVEKEKLLGVLRASSDANGKVQMSIVEAEL 66
M+W G+DWGSL+SK R M+S KVFDE+HG+SLGN+EKEKLLG LRASSDANGKV++ I + EL
Sbjct: 11 MEWAGEDWGSLTSKHKCR--MNSSKVFDEIHGMSLGNLEKEKLLGALRASSDANGKVKIKISKKEL 74
BLAST of Cc_v2.0_19526.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A072V691|A0A072V691_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=25486143 PE=4 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.009e-21 Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 0 Query: 1 MDWGGDDWGSLSSKQSKRRMMSSRKVFDEVHGVSLGNVEKEKLLGVLRASSDANGKVQMSIVEAEL 66
M+W G+DWGSL+S R M+S KVFDEVHG+SLGN+EKEKLLG LRASSDANGKV++ I + EL
Sbjct: 10 MEWAGEDWGSLTSNHKSR--MNSSKVFDEVHGLSLGNIEKEKLLGALRASSDANGKVKIKISKKEL 73
BLAST of Cc_v2.0_19526.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XAA3|A0A1S2XAA3_CICAR (Uncharacterized protein LOC101500677 OS=Cicer arietinum OX=3827 GN=LOC101500677 PE=4 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.030e-21 Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 0 Query: 1 MDWGGDDWGSLSSKQSKRRMMSSRKVFDEVHGVSLGNVEKEKLLGVLRASSDANGKVQMSIVEAEL 66
M+W G+DWGSL+SK + M+S KVFDEVHG+SLGN+EKEKLLG LRASSDANGKV++ I + EL
Sbjct: 11 MEWAGEDWGSLTSKHKSK--MNSSKVFDEVHGLSLGNIEKEKLLGALRASSDANGKVKIKISKKEL 74
BLAST of Cc_v2.0_19526.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VIP9|A0A1S3VIP9_VIGRR (Uncharacterized protein LOC106775475 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775475 PE=4 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.148e-21 Identity = 49/66 (74.24%), Postives = 53/66 (80.30%), Query Frame = 0 Query: 1 MDWGGDDWGSLSSKQSKRRMMSSRKVFDEVHGVSLGNVEKEKLLGVLRASSDANGKVQMSIVEAEL 66
M+WGGDDWGSLSSK RR MSS KVFDEVH SL VEKEKLLG LRASSDANGKV++ I + EL
Sbjct: 11 MNWGGDDWGSLSSK---RRSMSSGKVFDEVHEASLEKVEKEKLLGALRASSDANGKVKIKISKKEL 73 The following BLAST results are available for this feature:
BLAST of Cc_v2.0_19526.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Cc_v2.0_19526.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot ) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Cc_v2.0_19526.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11) Total hits: 0 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCajCajn.Asha.2.0.Cc_v2.0_19526.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19526.1; Name=Cc_v2.0_19526.1; organism=Cajanus cajan; type=mRNA; length=285bpback to top protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_19526.1 >drCajCajn.Asha.2.0.Cc_v2.0_19526.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19526.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_19526.1; organism=Cajanus cajan; type=polypeptide; length=94bpback to top mRNA from alignment at CcLG08_v2.0:54063999..54066474+ Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>drCajCajn.Asha.2.0.Cc_v2.0_19526.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19526.1; Name=Cc_v2.0_19526.1; organism=Cajanus cajan; type=mRNA; length=2476bp; location=Sequence derived from: CcLG08_v2.0:54063999..54066474+ (Cajanus cajanback to top Coding sequence (CDS) from alignment at CcLG08_v2.0:54063999..54066474+ >drCajCajn.Asha.2.0.Cc_v2.0_19526.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19526.1; Name=Cc_v2.0_19526.1; organism=Cajanus cajan; type=CDS; length=285bp; location=Sequence derived from: CcLG08_v2.0:54063999..54066474+ (Cajanus cajanback to top |