Cc_v2.0_19652.1

Transcript Overview
NameCc_v2.0_19652.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_19652.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length387
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG08_v2.0chromosomeCcLG08_v2.0:55745909..55746295 -Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anccaL0049Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0050Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL137Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0222Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL303Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0413Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0849Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL065Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR677Pisum sativum Cameor genome v1aPisum sativum
ccapsR707Pisum sativum Cameor genome v1aPisum sativum
ccapsR718Pisum sativum Cameor genome v1aPisum sativum
carccaL621Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavrvR613Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR659Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR754Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccapvR782Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavssR722Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccccaL0651Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL1226Cajanus cajan Asha genome v1.0Cajanus cajan
ccavumR710Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR594Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR753Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavunR516Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR778Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR801Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_19652drCajCajn.Asha.2.0.Cc_v2.0_19652Cajanus cajangene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_19652.1drCajCajn.Asha.2.0.cds.Cc_v2.0_19652.1Cajanus cajanCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_19652.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_19652.1.exon1Cajanus cajanexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_19652.1drCajCajn.Asha.2.0.Cc_v2.0_19652.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_19652.1drCajCajn.Asha.2.0.Cc_v2.0_19652.1-proteinCajanus cajanpolypeptide


Homology
BLAST of Cc_v2.0_19652.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TNF6|A0A151TNF6_CAJCA (DNA ligase OS=Cajanus cajan OX=3821 GN=KK1_022227 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.057e-32
Identity = 85/138 (61.59%), Postives = 96/138 (69.57%), Query Frame = 0
Query:    1 MSKRPSAFDVLMR----AAKKSQSQPPQPSPSPRKRKRKSPHSTSSQNSTILKPLQKPP-------KPKPKPAPPPKNTFRNLSPSSSPSLSKEKKRVSLLNKKPSDFDPATVAWWEKGQPVPFLFLALAFDMISPKS 127
            MSKRPSAFD LM     AAKKSQSQP QPS SPRKRK  SPHSTSSQN +I  PL+KPP       +P P P     +       SS  + ++ KKR SLL KKPSDFDPA+VAWW+ G+PVPFLFLALAFDMIS +S
Sbjct:   32 MSKRPSAFDALMSGARAAAKKSQSQPAQPSSSPRKRK--SPHSTSSQNPSITNPLEKPPKPEPASSEPAPAPKKKLLSLSLPSPSSSEDNTAELKKRASLLKKKPSDFDPASVAWWQNGEPVPFLFLALAFDMISLES 167          
BLAST of Cc_v2.0_19652.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7BUY4|V7BUY4_PHAVU (ATP-dependent DNA ligase family profile domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G021200g PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.717e-22
Identity = 70/146 (47.95%), Postives = 85/146 (58.22%), Query Frame = 0
Query:    1 MSKRPSAFDVLMRAA-------KKSQSQP--PQPSPSPRKRK----------RKSPHSTSSQNSTILKPLQKPPKPKPKPAPPPKNTFRNLSPSSSPSLSKEKKRVSLLNKKPSDFDPATVAWWEKGQPVPFLFLALAFDMISPKS 127
            MSK PSA D LM  A       K SQS+P  P+ S S +KRK          RKSPHSTSSQN T+ KP Q     KPK    P+   +      +  + + +K+V  L +KPS FDPA+V  WEKGQPVPFLFLALAFDMI  ++
Sbjct:    1 MSKPPSALDFLMSVAAAAAAVKKNSQSKPQTPKLSSSLKKRKSPNSTSVAKKRKSPHSTSSQNPTV-KPEQVL---KPKEVLKPEEVLKAEEAVKAEEVVEMEKQVQQLRQKPSSFDPASVTAWEKGQPVPFLFLALAFDMIDEET 142          
BLAST of Cc_v2.0_19652.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KQ51|A0A8B8KQ51_ABRPR (DNA ligase OS=Abrus precatorius OX=3816 GN=LOC113857904 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.515e-21
Identity = 69/137 (50.36%), Postives = 88/137 (64.23%), Query Frame = 0
Query:    1 MSKRPSAFDVLM---RAAKKSQSQPPQPSPSPRKRKRKSPHSTSSQNSTILK------PLQKPPKP-KPKPAPPPKNTFRNLSPSSSPSLSKEKKRVSLLNKKPSDFDPATVAWWEKGQPVPFLFLALAFDMISPKS 127
            MSK PSAFD LM   RAA K +S      PS   +KRKSPHSTS+QN   LK      P++   +P K      P++  R++S SS   +++ KKRV  L KKPS+FDPA+VA WEK +PVPFLFL LAFDMI+ ++
Sbjct:   39 MSKPPSAFDALMSGARAAAKKKSPQQPQPPSSSPKKRKSPHSTSTQNPNSLKTPLSSSPIETVQQPNKQHETAEPEHKIRHVS-SSQEIVAELKKRVPQLKKKPSEFDPASVACWEKEKPVPFLFLCLAFDMIAEET 174          
BLAST of Cc_v2.0_19652.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KQ45|A0A8B8KQ45_ABRPR (DNA ligase OS=Abrus precatorius OX=3816 GN=LOC113857904 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.701e-21
Identity = 69/137 (50.36%), Postives = 88/137 (64.23%), Query Frame = 0
Query:    1 MSKRPSAFDVLM---RAAKKSQSQPPQPSPSPRKRKRKSPHSTSSQNSTILK------PLQKPPKP-KPKPAPPPKNTFRNLSPSSSPSLSKEKKRVSLLNKKPSDFDPATVAWWEKGQPVPFLFLALAFDMISPKS 127
            MSK PSAFD LM   RAA K +S      PS   +KRKSPHSTS+QN   LK      P++   +P K      P++  R++S SS   +++ KKRV  L KKPS+FDPA+VA WEK +PVPFLFL LAFDMI+ ++
Sbjct:   39 MSKPPSAFDALMSGARAAAKKKSPQQPQPPSSSPKKRKSPHSTSTQNPNSLKTPLSSSPIETVQQPNKQHETAEPEHKIRHVS-SSQEIVAELKKRVPQLKKKPSEFDPASVACWEKEKPVPFLFLCLAFDMIAEET 174          
BLAST of Cc_v2.0_19652.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA87B9M4|A0AA87B9M4_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS31447 PE=4 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.732e-21
Identity = 76/158 (48.10%), Postives = 89/158 (56.33%), Query Frame = 0
Query:    1 MSKRPSAFDVLMRAA-----KKSQSQPPQPSPSPRKRKRKSPHSTSSQNSTILK--------PLQKPPKP----KPKPAPPPKNTFR-------------NLSPSSSPSLSKE-KKRVSLLNKKPSDFDPATVAWWEKGQPVPFLFLALAFDMISPKS 127
            MSK PSAFD +M  A     K+SQS+  +P P    +KRKSP STSSQN   LK         L++  KP    KP+    P+ T                LS SSS   + E KK+V  L KKPS FDPA+V  WEKGQPVPFLFLALAFDMIS +S
Sbjct:    1 MSKPPSAFDAIMSGARAAAKKESQSKSREPKPPSISKKRKSPQSTSSQNPKNLKSPSPPTTAELEQAIKPEETVKPEKTVKPEETVELKEAVKPEPWKVGFLSSSSSNVKTVELKKQVPQLKKKPSSFDPASVTAWEKGQPVPFLFLALAFDMISQES 158          
BLAST of Cc_v2.0_19652.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7AJQ4|V7AJQ4_PHAVU (DNA ligase OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G085900g PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.638e-21
Identity = 74/163 (45.40%), Postives = 89/163 (54.60%), Query Frame = 0
Query:    1 MSKRPSAFDVLMRAA-----KKSQSQPPQPSPSPRKRKRKSPHSTSSQNS------------TILKPLQKPPKP----------KPKPAPPPKNTF-------RNLSPSSSPSLSKEK--KRVSLLNKKPSDFDPATVAWWEKGQPVPFLFLALAFDMISPKS 127
            MSK PSAFD LM  A     K SQS+P  P+ S   +KRKSPHS SSQN               ++P Q   KP          KP+ A  P+          R+LS S+S +    +  K+V  L +KPS FDPA+V  WEKGQPVPFLFLALAFDMIS +S
Sbjct:   45 MSKPPSAFDALMSGARAAAKKSSQSKPQTPNLSSSPKKRKSPHSASSQNPSNSKSPKLPSPPVTVEPEQAAVKPEQAVKPEEAVKPEEAVKPEEAIKPEQRKVRHLSSSNSSNGKTVELIKQVPQLKQKPSSFDPASVTAWEKGQPVPFLFLALAFDMISQES 207          
BLAST of Cc_v2.0_19652.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9V6F3|A0A0L9V6F3_PHAAN (DNA ligase OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g146700 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.259e-20
Identity = 71/143 (49.65%), Postives = 85/143 (59.44%), Query Frame = 0
Query:    1 MSKRPSAFDVLMRAAKKSQSQPPQPSPSPRKRKRKSPHSTSSQN------------STILKPLQ---KPPKPKPKPAPPPKNTFRNLSPSSSPSLSKE-KKRVSLLNKKPSDFDPATVAWWEKGQPVPFLFLALAFDMISPKS 127
            MSK PSAFD LM AAKK+         SP K KRKSP STSSQN               ++P Q   +    KP+   P     R LS SSS   ++E KK+V+ L +KPS FDPA++  WEKG+PVPFLFLALAFDMIS +S
Sbjct:    1 MSKPPSAFDALMAAAKKNSKSKTSKLSSPPK-KRKSPLSTSSQNPSNPKSPKLPSPPITVEPEQAVKQEEVAKPEAVKPEPRKVRQLSTSSSKGKTEELKKQVAQLKQKPSSFDPASMIAWEKGEPVPFLFLALAFDMISQES 142          
BLAST of Cc_v2.0_19652.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SCM5|A0A0S3SCM5_PHAAN (DNA ligase OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G176000 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.868e-20
Identity = 71/143 (49.65%), Postives = 85/143 (59.44%), Query Frame = 0
Query:    1 MSKRPSAFDVLMRAAKKSQSQPPQPSPSPRKRKRKSPHSTSSQN------------STILKPLQ---KPPKPKPKPAPPPKNTFRNLSPSSSPSLSKE-KKRVSLLNKKPSDFDPATVAWWEKGQPVPFLFLALAFDMISPKS 127
            MSK PSAFD LM AAKK+         SP K KRKSP STSSQN               ++P Q   +    KP+   P     R LS SSS   ++E KK+V+ L +KPS FDPA++  WEKG+PVPFLFLALAFDMIS +S
Sbjct:   44 MSKPPSAFDALMAAAKKNSKSKTSKLSSPPK-KRKSPLSTSSQNPSNPKSPKLPSPPITVEPEQAVKQEEVAKPEAVKPEPRKVRQLSTSSSKGKTEELKKQVAQLKQKPSSFDPASMIAWEKGEPVPFLFLALAFDMISQES 185          
BLAST of Cc_v2.0_19652.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0KD54|A0A8T0KD54_PHAAN (DNA ligase OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0142380 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.868e-20
Identity = 71/143 (49.65%), Postives = 85/143 (59.44%), Query Frame = 0
Query:    1 MSKRPSAFDVLMRAAKKSQSQPPQPSPSPRKRKRKSPHSTSSQN------------STILKPLQ---KPPKPKPKPAPPPKNTFRNLSPSSSPSLSKE-KKRVSLLNKKPSDFDPATVAWWEKGQPVPFLFLALAFDMISPKS 127
            MSK PSAFD LM AAKK+         SP K KRKSP STSSQN               ++P Q   +    KP+   P     R LS SSS   ++E KK+V+ L +KPS FDPA++  WEKG+PVPFLFLALAFDMIS +S
Sbjct:   44 MSKPPSAFDALMAAAKKNSKSKTSKLSSPPK-KRKSPLSTSSQNPSNPKSPKLPSPPITVEPEQAVKQEEVAKPEAVKPEPRKVRQLSTSSSKGKTEELKKQVAQLKQKPSSFDPASMIAWEKGEPVPFLFLALAFDMISQES 185          
BLAST of Cc_v2.0_19652.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LHS9|A0A4D6LHS9_VIGUN (DNA ligase OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2668 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.246e-20
Identity = 75/151 (49.67%), Postives = 89/151 (58.94%), Query Frame = 0
Query:    1 MSKRPSAFDVLMRAAKK-SQSQPPQPSPSPRKRKRKSPHSTSSQN------------STILKPLQKPPKPKPKP----------APPPKNTFRNLSPSSSPSLSKE-KKRVSLLNKKPSDFDPATVAWWEKGQPVPFLFLALAFDMISPKS 127
            MSK PSAFD LM AAKK S+S+ P+   SP+KRK  S  STSSQN            +  ++P Q   +   KP          A P K   R LS SSS   ++E KK V  L +KPS FDPA++  WEKGQPVPFLFLALAFDMIS +S
Sbjct:    1 MSKPPSAFDALMSAAKKNSKSKTPKLPSSPKKRK--SSLSTSSQNPSNPKSPKLPSPAITVEPEQAVKQEVVKPEAVKAEEAVKAEPKK--VRQLSSSSSNGKTEELKKLVPRLKQKPSSFDPASMIAWEKGQPVPFLFLALAFDMISQES 147          
BLAST of Cc_v2.0_19652.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q42572|DNLI1_ARATH (DNA ligase 1 OS=Arabidopsis thaliana OX=3702 GN=LIG1 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.461e-17
Identity = 52/142 (36.62%), Postives = 74/142 (52.11%), Query Frame = 0
Query:    2 SKRPSAFDVLMR----AAKKSQSQPPQPSPSPRKRKRKSPHSTSSQNSTI-----------LKPLQKPPKPKPKPAPPPKNTFRNLSPSSSPSLSKE-KKRVSLLNKKPSDFDPATVAWWEKGQPVPFLFLALAFDMISPKS 127
            S RPSAFD LM     AAKK   Q    S SP KRK       +   + +           L+P+     P+   +   +++      + + S + E K ++ LL KKP+DFDP  ++ WEKG+ VPFLF+ALAFD+IS +S
Sbjct:   50 SSRPSAFDALMSNARAAAKKKTPQTTNLSRSPNKRKIGETQDANLGKTIVSEGTLPKTEDLLEPVSDSANPRSDTSSIAEDSKTGAKKAKTLSKTDEMKSKIGLLKKKPNDFDPEKMSCWEKGERVPFLFVALAFDLISNES 191          
BLAST of Cc_v2.0_19652.1 vs. Araport11
Match: | (Symbols: ATLIG1, LIG1 | DNA ligase 1 | chr1:2542913-2547815 REVERSE LENGTH=790)

HSP 1 Score: 80.1073 bits (196), Expect = 2.487e-18
Identity = 52/142 (36.62%), Postives = 74/142 (52.11%), Query Frame = 0
Query:    2 SKRPSAFDVLMR----AAKKSQSQPPQPSPSPRKRKRKSPHSTSSQNSTI-----------LKPLQKPPKPKPKPAPPPKNTFRNLSPSSSPSLSKE-KKRVSLLNKKPSDFDPATVAWWEKGQPVPFLFLALAFDMISPKS 127
            S RPSAFD LM     AAKK   Q    S SP KRK       +   + +           L+P+     P+   +   +++      + + S + E K ++ LL KKP+DFDP  ++ WEKG+ VPFLF+ALAFD+IS +S
Sbjct:   50 SSRPSAFDALMSNARAAAKKKTPQTTNLSRSPNKRKIGETQDANLGKTIVSEGTLPKTEDLLEPVSDSANPRSDTSSIAEDSKTGAKKAKTLSKTDEMKSKIGLLKKKPNDFDPEKMSCWEKGERVPFLFVALAFDLISNES 191          
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_19652.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151TNF6|A0A151TNF6_CAJCA4.057e-3261.59DNA ligase OS=Cajanus cajan OX=3821 GN=KK1_022227 ... [more]
tr|V7BUY4|V7BUY4_PHAVU5.717e-2247.95ATP-dependent DNA ligase family profile domain-con... [more]
tr|A0A8B8KQ51|A0A8B8KQ51_ABRPR1.515e-2150.36DNA ligase OS=Abrus precatorius OX=3816 GN=LOC1138... [more]
tr|A0A8B8KQ45|A0A8B8KQ45_ABRPR1.701e-2150.36DNA ligase OS=Abrus precatorius OX=3816 GN=LOC1138... [more]
tr|A0AA87B9M4|A0AA87B9M4_9FABA2.732e-2148.10Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|V7AJQ4|V7AJQ4_PHAVU8.638e-2145.40DNA ligase OS=Phaseolus vulgaris OX=3885 GN=PHAVU_... [more]
tr|A0A0L9V6F3|A0A0L9V6F3_PHAAN2.259e-2049.65DNA ligase OS=Phaseolus angularis OX=3914 GN=LR48_... [more]
tr|A0A0S3SCM5|A0A0S3SCM5_PHAAN2.868e-2049.65DNA ligase OS=Vigna angularis var. angularis OX=15... [more]
tr|A0A8T0KD54|A0A8T0KD54_PHAAN2.868e-2049.65DNA ligase OS=Phaseolus angularis OX=3914 GN=HKW66... [more]
tr|A0A4D6LHS9|A0A4D6LHS9_VIGUN4.246e-2049.67DNA ligase OS=Vigna unguiculata OX=3917 GN=DEO72_L... [more]
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BLAST of Cc_v2.0_19652.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q42572|DNLI1_ARATH2.461e-1736.62DNA ligase 1 OS=Arabidopsis thaliana OX=3702 GN=LI... [more]
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BLAST of Cc_v2.0_19652.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
|2.487e-1836.62Symbols: ATLIG1, LIG1 | DNA ligase 1 | chr1:254291... [more]
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Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_19652.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19652.1; Name=Cc_v2.0_19652.1; organism=Cajanus cajan; type=mRNA; length=387bp
ATGTCGAAGCGCCCCTCCGCCTTCGACGTCCTCATGCGCGCCGCCAAGAA
ATCTCAATCCCAGCCGCCGCAACCTTCTCCCTCCCCCAGGAAAAGGAAAA
GAAAATCCCCACACTCCACTTCCTCTCAAAACTCTACCATCCTCAAACCC
CTCCAAAAACCACCTAAACCTAAACCTAAACCCGCGCCGCCACCGAAGAA
CACGTTTCGCAACCTGTCACCATCATCATCTCCGTCTTTGTCGAAGGAGA
AGAAGCGAGTCTCGCTGCTGAATAAGAAACCCTCGGATTTCGACCCAGCC
ACCGTGGCTTGGTGGGAGAAGGGCCAACCCGTGCCGTTCCTCTTCCTGGC
ATTGGCCTTCGACATGATTTCCCCGAAGTCCCGGTGA
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_19652.1

>drCajCajn.Asha.2.0.Cc_v2.0_19652.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19652.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_19652.1; organism=Cajanus cajan; type=polypeptide; length=128bp
MSKRPSAFDVLMRAAKKSQSQPPQPSPSPRKRKRKSPHSTSSQNSTILKP
LQKPPKPKPKPAPPPKNTFRNLSPSSSPSLSKEKKRVSLLNKKPSDFDPA
TVAWWEKGQPVPFLFLALAFDMISPKSR
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mRNA from alignment at CcLG08_v2.0:55745909..55746295-

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_19652.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19652.1; Name=Cc_v2.0_19652.1; organism=Cajanus cajan; type=mRNA; length=387bp; location=Sequence derived from: CcLG08_v2.0:55745909..55746295- (Cajanus cajan
ATGTCGAAGCGCCCCTCCGCCTTCGACGTCCTCATGCGCGCCGCCAAGAA ATCTCAATCCCAGCCGCCGCAACCTTCTCCCTCCCCCAGGAAAAGGAAAA GAAAATCCCCACACTCCACTTCCTCTCAAAACTCTACCATCCTCAAACCC CTCCAAAAACCACCTAAACCTAAACCTAAACCCGCGCCGCCACCGAAGAA CACGTTTCGCAACCTGTCACCATCATCATCTCCGTCTTTGTCGAAGGAGA AGAAGCGAGTCTCGCTGCTGAATAAGAAACCCTCGGATTTCGACCCAGCC ACCGTGGCTTGGTGGGAGAAGGGCCAACCCGTGCCGTTCCTCTTCCTGGC ATTGGCCTTCGACATGATTTCCCCGAAGTCCCGGTGA
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Coding sequence (CDS) from alignment at CcLG08_v2.0:55745909..55746295-

>drCajCajn.Asha.2.0.Cc_v2.0_19652.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19652.1; Name=Cc_v2.0_19652.1; organism=Cajanus cajan; type=CDS; length=387bp; location=Sequence derived from: CcLG08_v2.0:55745909..55746295- (Cajanus cajan
ATGTCGAAGCGCCCCTCCGCCTTCGACGTCCTCATGCGCGCCGCCAAGAA
ATCTCAATCCCAGCCGCCGCAACCTTCTCCCTCCCCCAGGAAAAGGAAAA
GAAAATCCCCACACTCCACTTCCTCTCAAAACTCTACCATCCTCAAACCC
CTCCAAAAACCACCTAAACCTAAACCTAAACCCGCGCCGCCACCGAAGAA
CACGTTTCGCAACCTGTCACCATCATCATCTCCGTCTTTGTCGAAGGAGA
AGAAGCGAGTCTCGCTGCTGAATAAGAAACCCTCGGATTTCGACCCAGCC
ACCGTGGCTTGGTGGGAGAAGGGCCAACCCGTGCCGTTCCTCTTCCTGGC
ATTGGCCTTCGACATGATTTCCCCGAAGTCCCGGTGA
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