Cc_v2.0_19693.1

Transcript Overview
NameCc_v2.0_19693.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_19693.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length1779
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG08_v2.0chromosomeCcLG08_v2.0:56332511..56336424 -Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjccaL137Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carccaL065Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR677Pisum sativum Cameor genome v1aPisum sativum
ccapsR699Pisum sativum Cameor genome v1aPisum sativum
ccavrvR613Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR659Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR782Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavssR722Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccccaL0326Cajanus cajan Asha genome v1.0Cajanus cajan
ccavumR752Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR594Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavunR516Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR801Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vum_05G00528.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Va09G057900.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun06g180300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
PvulFLAVERTChr06.1001772Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_014662120.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg38670.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.Ca_v2.0_00493Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Vigun06g180300.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Phvul.006G167500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.1g462480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat1g191760.1Pisum sativum Cameor genome v1aPisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_033295Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_19693drCajCajn.Asha.2.0.Cc_v2.0_19693Cajanus cajangene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_19693.1.exon4drCajCajn.Asha.2.0.Cc_v2.0_19693.1.exon4Cajanus cajanexon
Cc_v2.0_19693.1.exon3drCajCajn.Asha.2.0.Cc_v2.0_19693.1.exon3Cajanus cajanexon
Cc_v2.0_19693.1.exon2drCajCajn.Asha.2.0.Cc_v2.0_19693.1.exon2Cajanus cajanexon
Cc_v2.0_19693.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_19693.1.exon1Cajanus cajanexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_19693.1.utr3p1drCajCajn.Asha.2.0.Cc_v2.0_19693.1.utr3p1Cajanus cajanthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_19693.1drCajCajn.Asha.2.0.cds.Cc_v2.0_19693.1Cajanus cajanCDS
cds.Cc_v2.0_19693.1drCajCajn.Asha.2.0.cds.Cc_v2.0_19693.1_2Cajanus cajanCDS
cds.Cc_v2.0_19693.1drCajCajn.Asha.2.0.cds.Cc_v2.0_19693.1_3Cajanus cajanCDS
cds.Cc_v2.0_19693.1drCajCajn.Asha.2.0.cds.Cc_v2.0_19693.1_4Cajanus cajanCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_19693.1.utr5p1drCajCajn.Asha.2.0.Cc_v2.0_19693.1.utr5p1Cajanus cajanfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_19693.1drCajCajn.Asha.2.0.Cc_v2.0_19693.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_19693.1drCajCajn.Asha.2.0.Cc_v2.0_19693.1-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_19693.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151RRK4|A0A151RRK4_CAJCA (Nucleoporin NDC1 OS=Cajanus cajan OX=3821 GN=KK1_033295 PE=3 SV=1)

HSP 1 Score: 848.966 bits (2192), Expect = 0.000e+0
Identity = 421/426 (98.83%), Postives = 421/426 (98.83%), Query Frame = 0 
Query:  167 PRLPLSLSLSLSLLFAAAAASSSALSLASLARASPHSARLGFRGFLLGSLFSLHYLFNRRCLLHFPIIQRPPFFSFKMGLPSAARRALKLSVVAFVSSGIFLELLPHPFKYSVATTRFFADQITSFAASFAIFLSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLSMVCENNVDNWRRAGFFEETGETYKRVVAVCLRPLEHLATKLSEGSGNTVDKATQLSNQLLSPTEARPDVKYVEELYNFQLYAWCSRTVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVFAFHDEMLAGAKASLLEKDWVTSEKPLFGTREMLIQKLRLFLDFRAT 592
            PR PLSLSL    LFAAAAASSSALSLASLARASPHSARLGFRGFLLGSLFSLHYLFNRRCLLHFPIIQRPPFFSFKMGLPSAARRALKLSVVAFVSSGIFLELLPHPFKYSVATTRFFADQITSFAASFAIFLSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLSMVCENNVDNWRRAGFFEETGETYKRVVAVCLRPLEHLATKLSEGSGNTVDKATQLSNQLLSPTEARPDVKYVEELYNFQLYAWCSRTVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVFAFHDEMLAGAKASLLEKDWVTSEKPLFGTREMLIQKLRLFLDFRAT
Sbjct:   72 PRPPLSLSL----LFAAAAASSSALSLASLARASPHSARLGFRGFLLGSLFSLHYLFNRRCLLHFPIIQRPPFFSFKMGLPSAARRALKLSVVAFVSSGIFLELLPHPFKYSVATTRFFADQITSFAASFAIFLSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLSMVCENNVDNWRRAGFFEETGETYKRVVAVCLRPLEHLATKLSEGSGNTVDKATQLSNQLLSPTEARPDVKYVEELYNFQLYAWCSRTVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVFAFHDEMLAGAKASLLEKDWVTSEKPLFGTREMLIQKLRLFLDFRAT 493

HSP 2 Score: 152.91 bits (385), Expect = 2.387e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 
Query:    1 MSGGSRSRSRVELVLKNRFLRYLIWQSIPSSLIFITLLSLSSPHYPLCSFLLFLSSNLLFSLTLSSIATPHPRPPL 76
            MSGGSRSRSRVELVLKNRFLRYLIWQSIPSSLIFITLLSLSSPHYPLCSFLLFLSSNLLFSLTLSSIATPHPRPPL
Sbjct:    1 MSGGSRSRSRVELVLKNRFLRYLIWQSIPSSLIFITLLSLSSPHYPLCSFLLFLSSNLLFSLTLSSIATPHPRPPL 76
[Close]
BLAST of Cc_v2.0_19693.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445GRE7|A0A445GRE7_GLYSO (Nucleoporin protein Ndc1-Nup OS=Glycine soja OX=3848 GN=D0Y65_040397 PE=3 SV=1)

HSP 1 Score: 729.939 bits (1883), Expect = 0.000e+0
Identity = 352/400 (88.00%), Postives = 373/400 (93.25%), Query Frame = 0 
Query:  193 LASLARASPHSARLGFRGFLLGSLFSLHYLFNRRCLLHFPIIQRPPFFSFKMGLPSAARRALKLSVVAFVSSGIFLELLPHPFKYSVATTRFFADQITSFAASFAIFLSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLSMVCENNVDNWRRAGFFEETGETYKRVVAVCLRPLEHLATKLSEGSGNTVDKATQLSNQLLSPTEARPDVKYVEELYNFQLYAWCSRTVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVFAFHDEMLAGAKASLLEKDWVTSEKPLFGTREMLIQKLRLFLDFRAT 592
            +A  A   P  +RLGFRGFL+GSLF  HY+F RR +LHFPIIQRPPFFSFKMG+PS+ARRALKLS+VA V SGI LELLPHPFKYSVAT RFF +QITS AA+FAIF SWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEES+PTSLLRYLAYLDL MVCENNVD WRRAGFFEETGETYKRV+AVCL+PLEHLATKL EG GN VDKATQLSNQLLSPT+ARPD+K++EEL+NFQLYAWCSRT  SLTACSRK+DKFGVAQLSGSNAAVVSTLLSCLLAVE+FMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIV AFHDEMLAGAKASLLEKDWVT+ KPLFGTREMLIQKLRLFLDFRAT
Sbjct:   95 VAPAAHGLPGVSRLGFRGFLVGSLFGSHYVFKRRWVLHFPIIQRPPFFSFKMGVPSSARRALKLSIVASVFSGILLELLPHPFKYSVATGRFFTEQITSLAATFAIFFSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESSPTSLLRYLAYLDLCMVCENNVDTWRRAGFFEETGETYKRVIAVCLKPLEHLATKLGEGLGNPVDKATQLSNQLLSPTDARPDLKHIEELHNFQLYAWCSRTAVSLTACSRKDDKFGVAQLSGSNAAVVSTLLSCLLAVESFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVSAFHDEMLAGAKASLLEKDWVTNGKPLFGTREMLIQKLRLFLDFRAT 494

HSP 2 Score: 109.768 bits (273), Expect = 1.415e-21
Identity = 58/74 (78.38%), Postives = 62/74 (83.78%), Query Frame = 0 
Query:    1 MSGGSRSRSRVELVLKNRFLRYLIWQSIPSSLIFITLLSLSSPHYPLCSFLLFLSSNLLFSLTLSSIATPHPRP 74
            MSG +R   RVELVLKNRFL YLIWQSI SSLIFI+LLS SSPHYP  SFLLFL S+LLFS TLS IA+PHPRP
Sbjct:    2 MSGSTR---RVELVLKNRFLSYLIWQSIHSSLIFISLLSFSSPHYPFLSFLLFLPSHLLFSTTLSFIASPHPRP 72
[Close]
BLAST of Cc_v2.0_19693.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1MF07|I1MF07_SOYBN (Nucleoporin protein Ndc1-Nup OS=Glycine max OX=3847 GN=100800150 PE=3 SV=1)

HSP 1 Score: 728.398 bits (1879), Expect = 0.000e+0
Identity = 351/400 (87.75%), Postives = 372/400 (93.00%), Query Frame = 0 
Query:  193 LASLARASPHSARLGFRGFLLGSLFSLHYLFNRRCLLHFPIIQRPPFFSFKMGLPSAARRALKLSVVAFVSSGIFLELLPHPFKYSVATTRFFADQITSFAASFAIFLSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLSMVCENNVDNWRRAGFFEETGETYKRVVAVCLRPLEHLATKLSEGSGNTVDKATQLSNQLLSPTEARPDVKYVEELYNFQLYAWCSRTVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVFAFHDEMLAGAKASLLEKDWVTSEKPLFGTREMLIQKLRLFLDFRAT 592
            +A  A   P  +RLGFRGFL+GSLF  HY+F RR +LHFPIIQRPPFFSFKMG+PS+ARRALKLS+VA V SGI LELLPHPFKYSVAT RFF +QITS AA+F IF SWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEES+PTSLLRYLAYLDL MVCENNVD WRRAGFFEETGETYKRV+AVCL+PLEHLATKL EG GN VDKATQLSNQLLSPT+ARPD+K++EEL+NFQLYAWCSRT  SLTACSRK+DKFGVAQLSGSNAAVVSTLLSCLLAVE+FMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIV AFHDEMLAGAKASLLEKDWVT+ KPLFGTREMLIQKLRLFLDFRAT
Sbjct:   95 VAPAAHGLPGVSRLGFRGFLVGSLFGSHYVFKRRWVLHFPIIQRPPFFSFKMGVPSSARRALKLSIVASVFSGILLELLPHPFKYSVATGRFFTEQITSLAATFTIFFSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESSPTSLLRYLAYLDLCMVCENNVDTWRRAGFFEETGETYKRVIAVCLKPLEHLATKLGEGLGNPVDKATQLSNQLLSPTDARPDLKHIEELHNFQLYAWCSRTAVSLTACSRKDDKFGVAQLSGSNAAVVSTLLSCLLAVESFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVSAFHDEMLAGAKASLLEKDWVTNGKPLFGTREMLIQKLRLFLDFRAT 494

HSP 2 Score: 109.768 bits (273), Expect = 1.441e-21
Identity = 58/74 (78.38%), Postives = 62/74 (83.78%), Query Frame = 0 
Query:    1 MSGGSRSRSRVELVLKNRFLRYLIWQSIPSSLIFITLLSLSSPHYPLCSFLLFLSSNLLFSLTLSSIATPHPRP 74
            MSG +R   RVELVLKNRFL YLIWQSI SSLIFI+LLS SSPHYP  SFLLFL S+LLFS TLS IA+PHPRP
Sbjct:    2 MSGSTR---RVELVLKNRFLSYLIWQSIHSSLIFISLLSFSSPHYPFLSFLLFLPSHLLFSTTLSFIASPHPRP 72
[Close]
BLAST of Cc_v2.0_19693.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KMX7|A0A4D6KMX7_VIGUN (Nucleoporin NDC1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g579 PE=3 SV=1)

HSP 1 Score: 717.613 bits (1851), Expect = 0.000e+0
Identity = 362/427 (84.78%), Postives = 387/427 (90.63%), Query Frame = 0 
Query:  166 RPRLPLSLSLSLSLLFAAAAASSSALSLASLARASPHSARLGFRGFLLGSLFSLHYLFNRRCLLHFPIIQRPPFFSFKMGLPSAARRALKLSVVAFVSSGIFLELLPHPFKYSVATTRFFADQITSFAASFAIFLSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLSMVCENNVDNWRRAGFFEETGETYKRVVAVCLRPLEHLATKLSEGSGNTVDKATQLSNQLLSPTEARPDVKYVEELYNFQLYAWCSRTVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVFAFHDEMLAGAKASLLEKDWVTSEKPLFGTREMLIQKLRLFLDFRAT 592
            RPRLPLSL        A AAA S+ALSL + A  S    RL FRGFL+GSLF+ HYLF RR LLHFPIIQRPPFFSFKMG+PSAAR+A KLSV+AF  SG+ LELLPHPFKY+VATTRFF +QITSFAA+FAIF SWELTHHLHWVLHTKR+IFAPPKGSAAAETNPSEHLLSALEE+NPTSL RYLA+LDL MVCENNVD WRRAGFFEETGETYKRVVAVCL+PLEHLATKL EGSG++VDKATQLSNQLLSPT+ R D+KYVEELYNFQLYAWCSR+VASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQ PNQLLG AGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIV AF DEM AGAKA+LLEKDW+T+ KP+FGTREMLIQKLR+FLDFRAT
Sbjct:   75 RPRLPLSLLF------ATAAAFSAALSLPAAAHPSSPLPRLAFRGFLIGSLFASHYLFQRRWLLHFPIIQRPPFFSFKMGVPSAARQAFKLSVLAFFISGVLLELLPHPFKYAVATTRFFVEQITSFAATFAIFFSWELTHHLHWVLHTKRAIFAPPKGSAAAETNPSEHLLSALEETNPTSLPRYLAHLDLYMVCENNVDTWRRAGFFEETGETYKRVVAVCLKPLEHLATKLGEGSGSSVDKATQLSNQLLSPTDPRSDLKYVEELYNFQLYAWCSRSVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQPPNQLLGAAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVSAFQDEMSAGAKANLLEKDWITTGKPVFGTREMLIQKLRIFLDFRAT 495

HSP 2 Score: 85.8853 bits (211), Expect = 9.592e-14
Identity = 45/78 (57.69%), Postives = 60/78 (76.92%), Query Frame = 0 
Query:    1 MSGGSRSRSRVELVLKNRFLRYLIWQSIPSSLIFITLLSL--SSPHYPLCSFLLFLSSNLLFSLTLSSIATPHPRPPL 76
            MSG   SR R+E+++KNR + +LIWQSI SS++F+  L L  SSPHYP  SF++FLSS+LLF  TLS +++PHPRP L
Sbjct:    4 MSG---SRGRLEMLVKNRLMSFLIWQSISSSIVFLHFLCLPLSSPHYPFFSFIVFLSSHLLFFPTLSFLSSPHPRPRL 78
[Close]
BLAST of Cc_v2.0_19693.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7BTP3|V7BTP3_PHAVU (Nucleoporin protein Ndc1-Nup OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G167500g PE=3 SV=1)

HSP 1 Score: 706.442 bits (1822), Expect = 0.000e+0
Identity = 361/427 (84.54%), Postives = 384/427 (89.93%), Query Frame = 0 
Query:  166 RPRLPLSLSLSLSLLFAAAAASSSALSLASLARASPHSARLGFRGFLLGSLFSLHYLFNRRCLLHFPIIQRPPFFSFKMGLPSAARRALKLSVVAFVSSGIFLELLPHPFKYSVATTRFFADQITSFAASFAIFLSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLSMVCENNVDNWRRAGFFEETGETYKRVVAVCLRPLEHLATKLSEGSGNTVDKATQLSNQLLSPTEARPDVKYVEELYNFQLYAWCSRTVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVFAFHDEMLAGAKASLLEKDWVTSEKPLFGTREMLIQKLRLFLDFRAT 592
            RPRLPLSL      LFA AA+ S+ALSL + A  S    RL  RGFLLGSLF+ HYLF RR LLHFPIIQRP FFSFKMG+PSAA++A KLS +AFV SG+ LELLPHPFKYSVATT FF +Q+T+FAA+FAIF SWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEE+ PTSLLRYLA+LDL MVCENNVD WRRAGFFEET ETYKRVV VCL+PLEHLATKL EG G++VDKATQLSNQLLSPTEAR D K VEELYNFQLYAWCSR+VASLTACSRKEDK GVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIV AFHDEMLAGAKA+LLEKDW+T+ KP FGTREMLIQKLR+FLDFRAT
Sbjct:   73 RPRLPLSL------LFATAASFSAALSLPAAAHPSSPLPRLALRGFLLGSLFASHYLFQRRWLLHFPIIQRPLFFSFKMGVPSAAQQAFKLSALAFVISGVLLELLPHPFKYSVATTGFFVEQLTTFAATFAIFFSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEETTPTSLLRYLAHLDLCMVCENNVDTWRRAGFFEETSETYKRVVDVCLKPLEHLATKLGEGPGSSVDKATQLSNQLLSPTEARFDFKNVEELYNFQLYAWCSRSVASLTACSRKEDKNGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVSAFHDEMLAGAKANLLEKDWITAGKPHFGTREMLIQKLRIFLDFRAT 493

HSP 2 Score: 65.0846 bits (157), Expect = 3.216e-7
Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = 0 
Query:    1 MSGGSRSRSRVELVLKNRFLRYLIWQSIPSSLIFITLLSL--SSPHYPLCSFLLFLSSNLLFSLTLSSIATPHPRPPL 76
            MSG   SR R+ELV+K R + ++IWQSI SSL+F+  L L  SSPHYPL SFLLFLSS LLFS TLS +++PHPRP L
Sbjct:    2 MSG---SRGRLELVVKKRLMSFMIWQSISSSLVFLCFLCLPFSSPHYPLFSFLLFLSSQLLFSPTLSLLSSPHPRPRL 76
[Close]
BLAST of Cc_v2.0_19693.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8K4P9|A0A8B8K4P9_ABRPR (Uncharacterized protein LOC113852614 OS=Abrus precatorius OX=3816 GN=LOC113852614 PE=3 SV=1)

HSP 1 Score: 703.36 bits (1814), Expect = 0.000e+0
Identity = 353/433 (81.52%), Postives = 376/433 (86.84%), Query Frame = 0 
Query:  166 RPRLPLSLSLSLSLLFAAAAASSSALSLASLARASPHS------ARLGFRGFLLGSLFSLHYLFNRRCLLHFPIIQRPPFFSFKMGLPSAARRALKLSVVAFVSSGIFLELLPHPFKYSVATTRFFADQITSFAASFAIFLSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLSMVCENNVDNWRRAGFFEETGETYKRVVAVCLRPLEHLATKLSEGSGNTVDKATQLSNQLLSPTEARPDVKYVEELYNFQLYAWCSRTVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVFAFHDEMLAGAKASLLEKDWVTSEKPLFGTREMLIQKLRLFLDFRAT 592
            R RL LSL+     LF AA+A+S   +  SLA  +P         R+GFRGFL+GSLF  HY+F RR +L FPIIQRPPFFSFKMG+PSA RRA KLS VAF+ S + LE+LPHPF Y +AT RFFA+QI  + ASFAIFL WELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDL MVCENNVD WRRAGFFEETGETYKRV+AVCLRPLEHL TKL EG GN+VDK  QLSNQL SPT+ RPD K VEELYNFQLYAWCSRTVASLTA SRKEDKFGVAQLSGSNAAVVSTL+SCLLAVENFMGKKTNLQSPNQLLGPAGIKWAT+NSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIV AFHDEMLAGAK +LLEKDW+TS KPLFGTREMLIQKLRLFLDFRAT
Sbjct:   99 RARLRLSLAF---FLFVAASAASGFAAAVSLAGVAPIRDGFWAIGRVGFRGFLIGSLFGFHYVFKRRWVLDFPIIQRPPFFSFKMGVPSATRRAFKLSTVAFLFSAVLLEVLPHPFNYGIATRRFFAEQIIFYVASFAIFLCWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLCMVCENNVDTWRRAGFFEETGETYKRVIAVCLRPLEHLVTKLGEGLGNSVDKPAQLSNQLSSPTDPRPDSKCVEELYNFQLYAWCSRTVASLTAFSRKEDKFGVAQLSGSNAAVVSTLISCLLAVENFMGKKTNLQSPNQLLGPAGIKWATINSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVSAFHDEMLAGAKGNLLEKDWITSGKPLFGTREMLIQKLRLFLDFRAT 528
[Close]
BLAST of Cc_v2.0_19693.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VGX0|A0A1S3VGX0_VIGRR (Uncharacterized protein LOC106775082 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775082 PE=3 SV=1)

HSP 1 Score: 703.36 bits (1814), Expect = 0.000e+0
Identity = 350/427 (81.97%), Postives = 381/427 (89.23%), Query Frame = 0 
Query:  167 PRLPLSLSLSLSLLFAAAAAS-SSALSLASLARASPHSARLGFRGFLLGSLFSLHYLFNRRCLLHFPIIQRPPFFSFKMGLPSAARRALKLSVVAFVSSGIFLELLPHPFKYSVATTRFFADQITSFAASFAIFLSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLSMVCENNVDNWRRAGFFEETGETYKRVVAVCLRPLEHLATKLSEGSGNTVDKATQLSNQLLSPTEARPDVKYVEELYNFQLYAWCSRTVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVFAFHDEMLAGAKASLLEKDWVTSEKPLFGTREMLIQKLRLFLDFRAT 592
            PRLPLSL  + +  F+AA +  ++AL+ ++L R+         RGFL GSLF+ HYLF RR LLHFPIIQRPPFFSFKMG+PSAAR+A KLS +A V S + LELLPHPFKY+VAT RFF +QI+S AA+F IF SWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEE+NPTSLLRYLA+LDL MVCENNVD WRRAGFFEETGETYKRVVAVCL+PLEHLATKL EGSGN+VDKATQLSNQLLSPT+AR D+K VEELYNFQLYAWCSR+VASLTA SRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQ PNQLLGPAGIKWATVNSGRVDVAAGK+RSGPVNSKAYAIADVLKTSIYQIV AF DEM AGAKA+LLEKDW+ S KP+FGTREMLIQKLR+FLDFRAT
Sbjct:    2 PRLPLSLLFATAAAFSAALSLPATALTSSTLPRSV-------LRGFLTGSLFASHYLFQRRWLLHFPIIQRPPFFSFKMGVPSAARKAFKLSFLASVISAVLLELLPHPFKYAVATPRFFVEQISSLAATFVIFFSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEETNPTSLLRYLAHLDLCMVCENNVDTWRRAGFFEETGETYKRVVAVCLKPLEHLATKLGEGSGNSVDKATQLSNQLLSPTDARSDLKNVEELYNFQLYAWCSRSVASLTASSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQPPNQLLGPAGIKWATVNSGRVDVAAGKKRSGPVNSKAYAIADVLKTSIYQIVSAFQDEMSAGAKANLLEKDWIISGKPVFGTREMLIQKLRIFLDFRAT 421
[Close]
BLAST of Cc_v2.0_19693.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371H1J8|A0A371H1J8_MUCPR (Nucleoporin protein Ndc1-Nup (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_20655 PE=3 SV=1)

HSP 1 Score: 702.59 bits (1812), Expect = 0.000e+0
Identity = 342/392 (87.24%), Postives = 362/392 (92.35%), Query Frame = 0 
Query:  193 LASLARASPHSARLGFRGFLLGSLFSLHYLFNRRCLLHFPIIQRPPFFSFKMGLPSAARRALKLSVVAFVSSGIFLELLPHPFKYS-VATTRFFADQITSFAASFAIFLSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLSMVCENNVDNWRRAGFFEETGETYKRVVAVCLRPLEHLATKLSEGSGNTVDKATQLSNQLLSPTEARPDVKYVEELYNFQLYAWCSRTVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVFAFHDEMLAGAKASLLEKDWVTSEKPLFGTREMLIQKL 583
            +A LA      ARLGFRGFL+GSLF  HY+F RR LL FPIIQRPPFFSFKMGLP AARRA KLS VAFV SG+ +E+LPHPFK+S VAT  FF +QI SFAA+FAIFLSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALE+S+PTSLLRYLAYLDL MVCENNVD WRRAGFFEETGETYKRV+AVCL+PLEHLATKL +G GN+VDKATQLSNQLLSPT+ARPD+KYVEELYNFQLYAWCSRTVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWAT+NSGRVDVAAGKRRSGPVNSKAYAI+DVLKTSIYQIV AFHDEMLAGAKASLLEKDWVTS KP+FGTREM  QKL
Sbjct:  100 VAPLAHGISAVARLGFRGFLIGSLFGSHYVFKRRWLLVFPIIQRPPFFSFKMGLPLAARRAFKLSTVAFVFSGVLVEVLPHPFKHSSVATRTFFTEQIVSFAATFAIFLSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEDSDPTSLLRYLAYLDLCMVCENNVDTWRRAGFFEETGETYKRVIAVCLKPLEHLATKLGDGLGNSVDKATQLSNQLLSPTDARPDLKYVEELYNFQLYAWCSRTVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATMNSGRVDVAAGKRRSGPVNSKAYAISDVLKTSIYQIVSAFHDEMLAGAKASLLEKDWVTSGKPVFGTREMHTQKL 491
[Close]
BLAST of Cc_v2.0_19693.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0K855|A0A8T0K855_PHAAN (Nucleoporin protein Ndc1-Nup OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0067540 PE=3 SV=1)

HSP 1 Score: 698.738 bits (1802), Expect = 0.000e+0
Identity = 355/427 (83.14%), Postives = 377/427 (88.29%), Query Frame = 0 
Query:  166 RPRLPLSLSLSLSLLFAAAAASSSALSLASLARASPHSARLGFRGFLLGSLFSLHYLFNRRCLLHFPIIQRPPFFSFKMGLPSAARRALKLSVVAFVSSGIFLELLPHPFKYSVATTRFFADQITSFAASFAIFLSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLSMVCENNVDNWRRAGFFEETGETYKRVVAVCLRPLEHLATKLSEGSGNTVDKATQLSNQLLSPTEARPDVKYVEELYNFQLYAWCSRTVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVFAFHDEMLAGAKASLLEKDWVTSEKPLFGTREMLIQKLRLFLDFRAT 592
            RPRLPLSL      LFA AAA S+AL L +    S    R   RGFL GSLF+ HYLF RR LLHFPIIQRPPFFSFKMG+PSAAR+A KLS +A V SG+ LELLPHPFKY+VAT RFF +QI+S A +F IF SWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEE+NPTSLLRYLA+LDL MVCENNVD WRRAGFFEETGETYKRVVAVCL+PLEHLATKL EGSGN+VDKATQLSNQLLSPT    D+K VEELYNFQLYAWCSR+VASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQ  NQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIV AF DEM AGAKA+LLEKDW+T+ KP+FGTREMLIQKLR+FLDFRAT
Sbjct:   74 RPRLPLSL------LFATAAAFSAALCLPATTLTSSTLPRSILRGFLTGSLFASHYLFQRRWLLHFPIIQRPPFFSFKMGVPSAARKAFKLSFLASVISGVLLELLPHPFKYAVATPRFFVEQISSLATTFVIFFSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEETNPTSLLRYLAHLDLCMVCENNVDTWRRAGFFEETGETYKRVVAVCLKPLEHLATKLGEGSGNSVDKATQLSNQLLSPT----DLKNVEELYNFQLYAWCSRSVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQPSNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVSAFQDEMSAGAKANLLEKDWITTGKPVFGTREMLIQKLRIFLDFRAT 490

HSP 2 Score: 85.1149 bits (209), Expect = 1.377e-13
Identity = 45/78 (57.69%), Postives = 59/78 (75.64%), Query Frame = 0 
Query:    1 MSGGSRSRSRVELVLKNRFLRYLIWQSIPSSLIFITLLSL--SSPHYPLCSFLLFLSSNLLFSLTLSSIATPHPRPPL 76
            MSG   SR R+ELV+KNR + +LIWQSI S+++F+  L    S PHYP  SF++FLSSNLLFS TLS +++P+PRP L
Sbjct:    3 MSG---SRGRLELVVKNRLMSFLIWQSISSAIVFLHFLCFPFSPPHYPFFSFIVFLSSNLLFSPTLSFLSSPNPRPRL 77
[Close]
BLAST of Cc_v2.0_19693.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1M1I7|I1M1I7_SOYBN (Nucleoporin protein Ndc1-Nup OS=Glycine max OX=3847 GN=100796588 PE=3 SV=1)

HSP 1 Score: 692.575 bits (1786), Expect = 0.000e+0
Identity = 365/431 (84.69%), Postives = 388/431 (90.02%), Query Frame = 0 
Query:  166 RPRLPLSLSLSLSLLFAAAAASSSALSLASLARAS---PHSARLGFRGFLLGSLFSLHYLFNRRCLLHFPIIQRPPFFSFKMGLPSAARRALKLSVVAFVSSGIFLELLPHPFKYSVATT-RFFADQITSFAASFAIFLSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLSMVCENNVDNWRRAGFFEETGETYKRVVAVCLRPLEHLATKLSEGSGNTVDKATQLSNQLLSPTEARPDVKYVEELYNFQLYAWCSRTVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVFAFHDEMLAGAKASLLEKDWVTSEKPLFGTREMLIQKLRLFLDFRAT 592
            RPR       +LSLLFA  +A S+ALSL++ A A+   P  +RLGFRGFL+GSLF  HY+F RR +LHFPIIQRPPFFSFKMG+PSAARRALKLSVVA + SGI LELLPHPF YSVA T RFF +QITSFAA+FAIF SWELTHHLHWVLHTKR IFAPPKGSA AETNPSEHLLSALEESNPTSLL YLAYLDL MVCENNVD WRRAGFFEET ETYKRV+AVCL+PLEHLATKL EG GN VDKATQLSNQLLSPT+ARPD+K++EEL+NFQLYAWCSRT ASLTACSRK+DKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGK RSGPVNSKAYAIADVLK SIYQIV AFHDEMLAGAKASLLEKDWVT+ KPLFGTREMLIQKLRLFLDFRAT
Sbjct:   72 RPRF------TLSLLFATVSAFSAALSLSAAAPAAHTLPGVSRLGFRGFLVGSLFGAHYVFKRRWVLHFPIIQRPPFFSFKMGVPSAARRALKLSVVASIFSGILLELLPHPFNYSVAATGRFFTEQITSFAATFAIFFSWELTHHLHWVLHTKRFIFAPPKGSAVAETNPSEHLLSALEESNPTSLLLYLAYLDLFMVCENNVDTWRRAGFFEETSETYKRVIAVCLKPLEHLATKLGEGLGNPVDKATQLSNQLLSPTDARPDLKHIEELHNFQLYAWCSRTAASLTACSRKDDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGK-RSGPVNSKAYAIADVLKISIYQIVSAFHDEMLAGAKASLLEKDWVTNGKPLFGTREMLIQKLRLFLDFRAT 495

HSP 2 Score: 103.99 bits (258), Expect = 1.031e-19
Identity = 57/75 (76.00%), Postives = 62/75 (82.67%), Query Frame = 0 
Query:    1 MSGGSRSRSRVELVLKNRFLRYLIWQSIPSSLIFITLLSL-SSPHYPLCSFLLFLSSNLLFSLTLSSIATPHPRP 74
            MSG +R   RVELVLKNRFL YLIWQSI SSLIFI+LLS  +SPHYP  SFLLFL S+LLFS TLS IA+PHPRP
Sbjct:    2 MSGSTR---RVELVLKNRFLSYLIWQSIHSSLIFISLLSFFTSPHYPFLSFLLFLPSHLLFSATLSFIASPHPRP 73
[Close]
BLAST of Cc_v2.0_19693.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:27542397-27544668 REVERSE LENGTH=519)

HSP 1 Score: 434.106 bits (1115), Expect = 1.301e-146
Identity = 231/389 (59.38%), Postives = 286/389 (73.52%), Query Frame = 0 
Query:  204 ARLGFRGFLLGSLFSLHYLFNRRCLLHFPIIQRPPFFSFKMGLPSAARRALKLSVVAFVSSGIFLELLPHPFKYSVATTRFFADQITSFAASFAIFLSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLSMVCENNVDNWRRAGFFEETGETYKRVVAVCLRPLEHLATKLSEGSGNT-VDKATQLSNQLLSPTEARPDVKYVEELYNFQLYAWCSRTVASLTACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVFAFHDEMLAGAKASLLEKDWVTSEKPLFGTREMLIQKLRLFLDFRA 591
             R+GFRG + G L+++ ++  +R +L FPIIQRPPFFSFK+GLPSA  +ALKLS V +V S I L  L       V+ ++F  +Q+ S+A SF + LSWE+THH+H VLHTKR  FAPPKGSAAAETNPSE LL+ALE S P SL + LAYLDL MV +NNVD WRRA FFEE+ ETYKRV+ +CLRPLE LA+KL+ G  +T  +K  Q    L  PTE+  D K+ E L +FQLYAWC++T ASLT+ S KED+ GVAQLSG NA VVSTLLS LLA+E FMGKKTNLQSP QL+GPA IKWAT +  R DV   KR  G + + AYA  DVL+ S+YQI+  F DEML   +A LL +DW+ S+KP FGT +ML+QKL+LFL+F+A
Sbjct:  133 GRIGFRGLVTGLLYAVLFVTKQRWVLEFPIIQRPPFFSFKIGLPSALTQALKLSGVLYVLSTIMLLFLLDWSGGLVSVSKFLGEQVLSYAGSFCLILSWEVTHHIHKVLHTKRFSFAPPKGSAAAETNPSEPLLAALEGSAPGSLEQSLAYLDLYMVSQNNVDTWRRAAFFEESTETYKRVITLCLRPLEELASKLASGLDHTFTEKGYQ--TPLQPPTESFIDPKFGESLKSFQLYAWCAQTSASLTSISHKEDRLGVAQLSGGNADVVSTLLSLLLAIETFMGKKTNLQSPQQLMGPASIKWATSSMVRKDVKPIKRSIGAMYAYAYAATDVLRISVYQILSTFRDEMLNSDRAGLLGRDWIGSKKPPFGTNDMLLQKLKLFLEFQA 519
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_19693.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151RRK4|A0A151RRK4_CAJCA2.387e-3698.83Nucleoporin NDC1 OS=Cajanus cajan OX=3821 GN=KK1_0... [more]
tr|A0A445GRE7|A0A445GRE7_GLYSO1.415e-2188.00Nucleoporin protein Ndc1-Nup OS=Glycine soja OX=38... [more]
tr|I1MF07|I1MF07_SOYBN1.441e-2187.75Nucleoporin protein Ndc1-Nup OS=Glycine max OX=384... [more]
tr|A0A4D6KMX7|A0A4D6KMX7_VIGUN9.592e-1484.78Nucleoporin NDC1 OS=Vigna unguiculata OX=3917 GN=D... [more]
tr|V7BTP3|V7BTP3_PHAVU3.216e-784.54Nucleoporin protein Ndc1-Nup OS=Phaseolus vulgaris... [more]
tr|A0A8B8K4P9|A0A8B8K4P9_ABRPR0.000e+081.52Uncharacterized protein LOC113852614 OS=Abrus prec... [more]
tr|A0A1S3VGX0|A0A1S3VGX0_VIGRR0.000e+081.97Uncharacterized protein LOC106775082 OS=Vigna radi... [more]
tr|A0A371H1J8|A0A371H1J8_MUCPR0.000e+087.24Nucleoporin protein Ndc1-Nup (Fragment) OS=Mucuna ... [more]
tr|A0A8T0K855|A0A8T0K855_PHAAN1.377e-1383.14Nucleoporin protein Ndc1-Nup OS=Phaseolus angulari... [more]
tr|I1M1I7|I1M1I7_SOYBN1.031e-1984.69Nucleoporin protein Ndc1-Nup OS=Glycine max OX=384... [more]
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BLAST of Cc_v2.0_19693.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Cc_v2.0_19693.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
|1.301e-14659.38Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019049Nucleoporin protein Ndc1-NupPFAMPF09531Ndc1_Nupcoord: 435..550
e-value: 3.5E-6
score: 37.7
coord: 210..426
e-value: 3.5E-6
score: 37.7
IPR019049Nucleoporin protein Ndc1-NupPANTHERPTHR13269UNCHARACTERIZEDcoord: 176..591

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_19693.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19693.1; Name=Cc_v2.0_19693.1; organism=Cajanus cajan; type=mRNA; length=1779bp
ATGTCTGGTGggagcaggagcaggagcagggttgagctggtgctCAAGAA
CAGATTCCTGAGATACTTAATATGGCAATCCATCCCTTCCTCACTAATCT
TCATCActcttctctctctctcctcacctcactaccctctctgctccttc
ctcctcttcctctcctccaacctcctcttctccctcaccctctcctccat
cgccaccccccacccccgcccccccctccCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCCC
CCGcctccccctctccctctccctctccctctccctcctcttcgccgccg
ccgccgcctcctcctccgccctctccctcgcctccctcgcccgcgcctcc
CCTCACTCTGCTCGATTAGGGTTTAGGGGTTTCCTCCTCGGCTCCCTCTT
CTCTCTGCACTACCTCTTCAACCGCCGATGCCTTCTCCATTTCCCCATCA
TCCAGCGTCCTCCCTTTTTCAGCTTCAAGATGGGGCTTCCTTCCGCTGCC
AGACGCGCTCTCAAGCTTTCCGTCGTTGCTTTCGTTTCTTCCGGGATTTT
CTTGGAGCTTCTGCCGCATCCCTTTAAGTACAGCGTTGCCACCACGAGAT
TCTTCGCCGACCAGATTACCTCCTTTGCTGCTTCTTTTGCTATCTTCCTC
TCTTGGGAACTGACTCATCATTTGCATTGGGTTTTGCATACTAAGAGGTC
CATATTTGCACCCCCAAAAGGATCAGCAGCTGCAGAAACAAATCCAAGTG
AGCATCTCCTTTCCGCTTTGGAGGAGAGCAATCCTACATCTCTTCTTCGG
TATCTTGCATATCTTGATCTCAGTATGGTTTGTGAGAACAATGTTGACAA
TTGGCGGCGTGCGGGGTTTTTTGAAGAAACTGGTGAGACTTACAAAAGAG
TAGTTGCTGTGTGCTTGAGGCCATTGGAGCATCTTGCCACAAAATTAAGT
GAAGGCTCAGGAAACACTGTTGACAAAGCCACACAATTGTCAAATCAGCT
GTTGTCCCCAACAGAGGCAAGGCCAGATGTGAAGTACGTTGAAGAACTGT
ACAACTTCCAGCTATATGCATGGTGTTCTAGGACTGTTGCCTCACTAACT
GCCTGCTCACGCAAAGAAGACAAGTTTGGGGTTGCCCAGCTTTCTGGGAG
TAATGCTGCCGTGGTTTCGACACTGTTATCCTGCCTTCTTGCTGTTGAAA
ATTTCATGGGCAAGAAAACAAACCTGCAATCCCCAAATCAGTTGTTAGGA
CCCGCTGGTATCAAATGGGCAACCGTTAATAGTGGAAGAGTTGATGTTGC
AGCTGGCAAAAGAAGAAGTGGCCCAGTAAATTCAAAGGCTTATGCTATTG
CTGACGTTCTCAAGACTTCAATCTACCAAATAGTCTTTGCATTCCATGAT
GAGATGTTGGCTGGTGCTAAAGCAAGTCTTCTGGAGAAGGACTGGGTCAC
AAGTGAGAAACCACTTTTTGGTACTCGTGAAATGCTTATACAAAAACTAC
GTCTTTTCCTTGATTTTCGAGCTACCTAA
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_19693.1

>drCajCajn.Asha.2.0.Cc_v2.0_19693.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19693.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_19693.1; organism=Cajanus cajan; type=polypeptide; length=592bp
MSGGSRSRSRVELVLKNRFLRYLIWQSIPSSLIFITLLSLSSPHYPLCSF
LLFLSSNLLFSLTLSSIATPHPRPPLXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXRPRLPLSLSLSLSLLFAAAAASSSALSLASLARAS
PHSARLGFRGFLLGSLFSLHYLFNRRCLLHFPIIQRPPFFSFKMGLPSAA
RRALKLSVVAFVSSGIFLELLPHPFKYSVATTRFFADQITSFAASFAIFL
SWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLR
YLAYLDLSMVCENNVDNWRRAGFFEETGETYKRVVAVCLRPLEHLATKLS
EGSGNTVDKATQLSNQLLSPTEARPDVKYVEELYNFQLYAWCSRTVASLT
ACSRKEDKFGVAQLSGSNAAVVSTLLSCLLAVENFMGKKTNLQSPNQLLG
PAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQIVFAFHD
EMLAGAKASLLEKDWVTSEKPLFGTREMLIQKLRLFLDFRAT
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mRNA from alignment at CcLG08_v2.0:56332511..56336424-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_19693.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19693.1; Name=Cc_v2.0_19693.1; organism=Cajanus cajan; type=mRNA; length=3914bp; location=Sequence derived from: CcLG08_v2.0:56332511..56336424- (Cajanus cajan
CTGGCTTACTGGTAGGTGCGTTGGAAGAAAGAAATAGGCGACAGAAGAAG
GGGGGGAAGGGTGTGAGCACTGAGCACTGAGCACTGAGCAGAGAAAACGT
AGAGGCGAAGGCATGTCTGGTGGGAGCAGGAGCAGGAGCAGGGTTGAGCT
GGTGCTCAAGAACAGATTCCTGAGATACTTAATATGGCAATCCATCCCTT
CCTCACTAATCTTCATCACTCTTCTCTCTCTCTCCTCACCTCACTACCCT
CTCTGCTCCTTCCTCCTCTTCCTCTCCTCCAACCTCCTCTTCTCCCTCAC
CCTCTCCTCCATCGCCACCCCCCACCCCCGCCCCCCCCTCCCNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCCGCCCCCGCCTCCCCCTCTCCCTCTCCCTCTCCCTCTCCCTCC
TCTTCGCCGCCGCCGCCGCCTCCTCCTCCGCCCTCTCCCTCGCCTCCCTC
GCCCGCGCCTCCCCTCACTCTGCTCGATTAGGGTTTAGGGGTTTCCTCCT
CGGCTCCCTCTTCTCTCTGCACTACCTCTTCAACCGCCGATGCCTTCTCC
ATTTCCCCATCATCCAGGTCCCATTTCTCTCTTCTCAAATGCATTCATCG
TTTCCAATCCTTTTTCTTCTTCTCATTCTGCCTGCTTCTGTCTCTGTCAA
CAGCGTCCTCCCTTTTTCAGCTTCAAGATGGGGCTTCCTTCCGCTGCCAG
ACGCGCTCTCAAGCTTTCCGTCGTTGCTTTCGTTTCTTCCGGGATTTTCT
TGGAGCTTCTGCCGCATCCCTTTAAGTACAGCGTTGCCACCACGAGATTC
TTCGCCGACCAGATTACCTCCTTTGCTGCTTCTTTTGCTATCTTCCTCTC
TTGGGAACTGACTCATCATTTGCATTGGGTTCCTTTTTCTATTCTGCCAC
TTCTAATAAGTTCCAACCTGTTTACTTTGTTTTTCGTGTTTTGCTTTCTT
ATAACTACTGTTACATGTCATGCTTCATTTCTTGTATGCTAATCCCAAAA
TGAAATGCTCGTCATCTTCTCTAATGATCCTACTTGTTTGTTGCCTGTTT
TAGGTTCTGTTCATATTTTTGTCACGAATTAGTCGTTGTTCAGTGATCTT
TGGGATTTCATGTACCTATTTGTTGGAGATTCTATGCTAACTAGTGATAT
GGTTTAAATAATATATACATATATAAGTGGGGAACAATTCTTGCATCATG
AGCTAACTTCTGGGGTTGAGTAAGGCTTATACACAATTCTTAAAACATTA
CAATTTGGTTCTATGTACACAGAGTACTTTAGTATAATGCTCAGGAATCA
GGATATGTACCAGAACTGATAATCTAAGTCCACATGTTAGTCGTGTTTTC
TTCATTATAATATTGTGTAAGACTTGCAGAAAAATGTAAAATTCATCTTG
TCTGCATGTACATGCTACATTATATAAGAAGCACCTGTGCAAACAACTGA
TTCACAATTTTATCTTAGCTATCCGTTATGAACCCTGTATATTTGTCACC
TTTGTACTAGTTTTAGAAATATATATATATACAACAATATGTATATTCCC
CAGCCTTTAGAGGGGCAGCATTGTTATCGGCTGCTGAAGTCTATGTTGGT
TGAATATGGTACATAGGTTTTGCATACTAAGAGGTCCATATTTGCACCCC
CAAAAGGATCAGCAGCTGCAGAAACAAATCCAAGTGAGCATCTCCTTTCC
GCTTTGGAGGAGAGCAATCCTACATCTCTTCTTCGGTATCTTGCATATCT
TGATCTCAGTATGGTTTGTGAGAACAATGTTGACAATTGGCGGCGTGCGG
GGTTTTTTGAAGAAACTGGTGAGACTTACAAAAGAGTAGTTGCTGTGTGC
TTGAGGCCATTGGAGCATCTTGCCACAAAATTAAGTGAAGGCTCAGGAAA
CACTGTTGACAAAGCCACACAATTGTCAAATCAGCTGTTGTCCCCAACAG
AGGCAAGGCCAGATGTGAAGTACGTTGAAGAACTGTACAACTTCCAGGTA
CATGCATAATTTCATTCTTTGTATATTGTTTATCTTAGCAAACATACATT
TTTTTTTTTTTGTTTTGTAAAATTGGAATAAATTTTAACTACACTAAACT
CTACAAAAAAATCCTGATTGTTATACAATGGACCAGGGAAATGGATAATT
TAATGAAGTTCTTGTAAGTTGTAACATTGATCAAGAATCATCCATAAGCC
TCATCCTGATTTTGTTTTAACCACTAACTCCTGCCTTCAAAATGGGGTGT
GTGCACATTGAATGTCGAGACTAGTGAGGAAATGTCTTATGTTCCCTGTG
AGGAAAGAACATATTTAAGTAATGGGATTCTAAGTAATAATTACAATGTG
TTGATGTGATGTACTAACCTTAATTTTAGGCCTATTAGAATTGTAGGATA
ACTACTAACTAACTAGTCCAAGTCCATTCCACTAGCACATTAAACAGAAC
GATTATGATAATTATAATATCCTAATGTTATATTGAATTTGATCTGTAGT
GAATGTAAAAATTGCTCCCTCAACCAATCTTTCTGTGGTTGATATTTAAG
CCTTCCCTATTAACTTGTAAGGAAAAAAAATGAGAGGATTAATTTGACCA
TTTTACTCCTGTTAAAACTCCCATTTTTTTGTTCTAGTGAGGATAATGTT
GCTCTTTAGATAATGCAATAAATATAGTTGGATGCACTTACAGAGGGAAA
AGCCAACCCATGAATCCTTTGGGCTGCATAAATATCTACGTGGGTCATTG
ACATGAATTGCCAGCATTATGAAATTGTAGATACATATTAAATGCATTTG
TTTGGTTAAATGCAGCTATATGCATGGTGTTCTAGGACTGTTGCCTCACT
AACTGCCTGCTCACGCAAAGAAGACAAGTTTGGGGTTGCCCAGCTTTCTG
GGAGTAATGCTGCCGTGGTTTCGACACTGTTATCCTGCCTTCTTGCTGTT
GAAAATTTCATGGGCAAGAAAACAAACCTGCAATCCCCAAATCAGTTGTT
AGGACCCGCTGGTATCAAATGGGCAACCGTTAATAGTGGAAGAGTTGATG
TTGCAGCTGGCAAAAGAAGAAGTGGCCCAGTAAATTCAAAGGCTTATGCT
ATTGCTGACGTTCTCAAGACTTCAATCTACCAAATAGTCTTTGCATTCCA
TGATGAGATGTTGGCTGGTGCTAAAGCAAGTCTTCTGGAGAAGGACTGGG
TCACAAGTGAGAAACCACTTTTTGGTACTCGTGAAATGCTTATACAAAAA
CTACGTCTTTTCCTTGATTTTCGAGCTACCTAACGGATGCATTGTACCGA
GGCTTGAATGCTACTTGTCTGAATTAAGCATTCTTGTAAGACATTTTACA
CACAGGATGTTGTCAAGTGAAGATATAGATGGAATGGAAGGAAAAAGTTC
GGTTTTGATGTCACAAATTTGAGATGGATATTAATGAGATTTTGTTGAAT
ATATCTGCATTGGCAGGTAAGCGATCATTTGGATGTGCTTTTTGTTGACA
ATTTTCTTAGGGTACTTCAATTATATCGAGTTTGGACTTTGGATGAGCAA
TTTCAGTGATGCACAAATTCGTTTTCTATGTTAGATTTTTGTGCTCATAA
AAAGTTGTTCATATTTTGTACATTTGCATGCAGCTACATACAGATATCGG
TTTATTGCCATTGC
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Coding sequence (CDS) from alignment at CcLG08_v2.0:56332511..56336424-

>drCajCajn.Asha.2.0.Cc_v2.0_19693.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19693.1; Name=Cc_v2.0_19693.1; organism=Cajanus cajan; type=CDS; length=1779bp; location=Sequence derived from: CcLG08_v2.0:56332511..56336424- (Cajanus cajan
ATGTCTGGTGGGAGCAGGAGCAGGAGCAGGGTTGAGCTGGTGCTCAAGAA
CAGATTCCTGAGATACTTAATATGGCAATCCATCCCTTCCTCACTAATCT
TCATCACTCTTCTCTCTCTCTCCTCACCTCACTACCCTCTCTGCTCCTTC
CTCCTCTTCCTCTCCTCCAACCTCCTCTTCTCCCTCACCCTCTCCTCCAT
CGCCACCCCCCACCCCCGCCCCCCCCTCCCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCCC
CCGCCTCCCCCTCTCCCTCTCCCTCTCCCTCTCCCTCCTCTTCGCCGCCG
CCGCCGCCTCCTCCTCCGCCCTCTCCCTCGCCTCCCTCGCCCGCGCCTCC
CCTCACTCTGCTCGATTAGGGTTTAGGGGTTTCCTCCTCGGCTCCCTCTT
CTCTCTGCACTACCTCTTCAACCGCCGATGCCTTCTCCATTTCCCCATCA
TCCAGCGTCCTCCCTTTTTCAGCTTCAAGATGGGGCTTCCTTCCGCTGCC
AGACGCGCTCTCAAGCTTTCCGTCGTTGCTTTCGTTTCTTCCGGGATTTT
CTTGGAGCTTCTGCCGCATCCCTTTAAGTACAGCGTTGCCACCACGAGAT
TCTTCGCCGACCAGATTACCTCCTTTGCTGCTTCTTTTGCTATCTTCCTC
TCTTGGGAACTGACTCATCATTTGCATTGGGTTTTGCATACTAAGAGGTC
CATATTTGCACCCCCAAAAGGATCAGCAGCTGCAGAAACAAATCCAAGTG
AGCATCTCCTTTCCGCTTTGGAGGAGAGCAATCCTACATCTCTTCTTCGG
TATCTTGCATATCTTGATCTCAGTATGGTTTGTGAGAACAATGTTGACAA
TTGGCGGCGTGCGGGGTTTTTTGAAGAAACTGGTGAGACTTACAAAAGAG
TAGTTGCTGTGTGCTTGAGGCCATTGGAGCATCTTGCCACAAAATTAAGT
GAAGGCTCAGGAAACACTGTTGACAAAGCCACACAATTGTCAAATCAGCT
GTTGTCCCCAACAGAGGCAAGGCCAGATGTGAAGTACGTTGAAGAACTGT
ACAACTTCCAGCTATATGCATGGTGTTCTAGGACTGTTGCCTCACTAACT
GCCTGCTCACGCAAAGAAGACAAGTTTGGGGTTGCCCAGCTTTCTGGGAG
TAATGCTGCCGTGGTTTCGACACTGTTATCCTGCCTTCTTGCTGTTGAAA
ATTTCATGGGCAAGAAAACAAACCTGCAATCCCCAAATCAGTTGTTAGGA
CCCGCTGGTATCAAATGGGCAACCGTTAATAGTGGAAGAGTTGATGTTGC
AGCTGGCAAAAGAAGAAGTGGCCCAGTAAATTCAAAGGCTTATGCTATTG
CTGACGTTCTCAAGACTTCAATCTACCAAATAGTCTTTGCATTCCATGAT
GAGATGTTGGCTGGTGCTAAAGCAAGTCTTCTGGAGAAGGACTGGGTCAC
AAGTGAGAAACCACTTTTTGGTACTCGTGAAATGCTTATACAAAAACTAC
GTCTTTTCCTTGATTTTCGAGCTACCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR019049Nucleoporin_prot_Ndc1/Nup