Cc_v2.0_19944.1

Transcript Overview
NameCc_v2.0_19944.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_19944.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length450
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG08_v2.0chromosomeCcLG08_v2.0:59499845..59503592 +Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjccaL097Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccaL137Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccaL290Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0414Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0474Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0529Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0571Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL632Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0847Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0991Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL1110Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL065Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR677Pisum sativum Cameor genome v1aPisum sativum
carccaL520Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR736Pisum sativum Cameor genome v1aPisum sativum
ccavrvR613Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR642Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR664Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR659Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR734Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccapvR737Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR713Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR782Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavssR722Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccccaL0081Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL0098Cajanus cajan Asha genome v1.0Cajanus cajan
ccavssR755Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccccaL0170Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL1108Cajanus cajan Asha genome v1.0Cajanus cajan
ccavumR697Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR565Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavuR567Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR752Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR594Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR758Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavunR485Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccavunR488Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccavunR516Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR761Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR767Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR801Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vigun03g112700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
evm.Ca_v2.0_17050Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
PvulFLAVERTChr06.2092Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-TanjilR_08017Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vum_06G00906.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vum_01G01084.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Va09G060970.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_20847Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_21678Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun06g205700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
jg38203.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va01G019460.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_13073Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.006G189600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun11g108600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-XM_014662569.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_014638066.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun06g205700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.Ca_v2.0_00282Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Phvul.002G224500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.1g477360.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Va08G052710.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014652134.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
PvulFLAVERTChr11.1000717Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-TanjilR_24982Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
PvulFLAVERTChr02.1001316Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vum_05G00295.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg29556.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.6g110160.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat1g207080.1Pisum sativum Cameor genome v1aPisum sativum
Phvul.011G112900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun03g112700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun11g108600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_017583Cajanus cajan Asha genome v1.0Cajanus cajan
rna-KK1_023514Cajanus cajan Asha genome v1.0Cajanus cajan
rna-KK1_022484Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_19944drCajCajn.Asha.2.0.Cc_v2.0_19944Cajanus cajangene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_19944.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_19944.1.exon1Cajanus cajanexon
Cc_v2.0_19944.1.exon2drCajCajn.Asha.2.0.Cc_v2.0_19944.1.exon2Cajanus cajanexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_19944.1.utr5p1drCajCajn.Asha.2.0.Cc_v2.0_19944.1.utr5p1Cajanus cajanfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_19944.1drCajCajn.Asha.2.0.cds.Cc_v2.0_19944.1Cajanus cajanCDS
cds.Cc_v2.0_19944.1drCajCajn.Asha.2.0.cds.Cc_v2.0_19944.1_2Cajanus cajanCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_19944.1.utr3p1drCajCajn.Asha.2.0.Cc_v2.0_19944.1.utr3p1Cajanus cajanthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_19944.1drCajCajn.Asha.2.0.Cc_v2.0_19944.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_19944.1drCajCajn.Asha.2.0.Cc_v2.0_19944.1-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_19944.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1MEC9|I1MEC9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100784624 PE=4 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 3.418e-81
Identity = 122/154 (79.22%), Postives = 132/154 (85.71%), Query Frame = 0 
Query:    1 MVREHN--SGWPPIGAPLNVQRNEYDERWSSFDNSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSP---PSTVWTRPRHSQLPFNAKLSHPSPKMSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWPSHQHSTFPCSTYNTLPNINQA 149
            MVREHN  SGWPPIGAPLNVQR+EYD+ WS+FD+SVNAVSFGFVATAILISMFLVMAIFE+FLKP SP   PS  W R R SQ+ FN KL+HPSPKMSLY SWVSVLMPGD  PSFIA P PAPCCPERISWPSHQH+T P STYNT+P+INQ 
Sbjct:    1 MVREHNINSGWPPIGAPLNVQRDEYDQHWSNFDSSVNAVSFGFVATAILISMFLVMAIFERFLKPTSPALLPSGGWNRRRSSQMDFNGKLAHPSPKMSLYTSWVSVLMPGDVTPSFIAQPVPAPCCPERISWPSHQHNTLPYSTYNTMPSINQV 154
[Close]
BLAST of Cc_v2.0_19944.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VIE4|A0A1S3VIE4_VIGRR (Uncharacterized protein LOC106775443 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775443 PE=4 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 6.831e-80
Identity = 124/155 (80.00%), Postives = 133/155 (85.81%), Query Frame = 0 
Query:    1 MVREHNS---GWPPIGAPLNVQRNEYDERWSS-FDNSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSPP---STVWTRPRHSQLPFNAKLSHPSPKMSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWPSHQHSTFPCSTYNTLPNINQ 148
            MVREHNS   GWPPIGAPLN+QR+EYD+ WSS FD+SVNAVSFGFVATAILISMFLVMAIFE+FLKP SPP   S  W R R SQ+ FN K+SHPSPKMSLYASWVSVLMPGDE PSFIAHPAPAPCCPERISWP HQHS+ P STY T+ NINQ
Sbjct:    1 MVREHNSSSSGWPPIGAPLNMQRDEYDQHWSSSFDSSVNAVSFGFVATAILISMFLVMAIFERFLKPTSPPLLPSGDWNRRRSSQMAFNGKISHPSPKMSLYASWVSVLMPGDETPSFIAHPAPAPCCPERISWPPHQHSSVPYSTYTTMHNINQ 155
[Close]
BLAST of Cc_v2.0_19944.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371ES75|A0A371ES75_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_52055 PE=4 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 1.022e-79
Identity = 121/154 (78.57%), Postives = 132/154 (85.71%), Query Frame = 0 
Query:    1 MVREHNSGWPPIGAPLNVQRNEYDERWSSFDNSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSPPSTVWTRPRHSQLPFNAKLSHPSPK------MSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWPSHQHSTFPCSTYNTLPNINQ 148
            MVREHNSGWPPIGAPLNVQRNEYD+ WSSFD+SVNAVSFGFVATAILISMFLVMAIFE+FLKP S PS  W+R R SQ+  N KL HPSPK      MSLYASWVSVLMPGDE+P+F+AHP PAPCCPERISWPSHQHS+ P   Y+T+PNINQ
Sbjct:    1 MVREHNSGWPPIGAPLNVQRNEYDQHWSSFDSSVNAVSFGFVATAILISMFLVMAIFERFLKPTS-PSAAWSRRRTSQIGLNGKLPHPSPKIVKFVQMSLYASWVSVLMPGDEIPTFVAHPVPAPCCPERISWPSHQHSSLP---YSTMPNINQ 150
[Close]
BLAST of Cc_v2.0_19944.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3S2I0|A0A0S3S2I0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G037400 PE=4 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 1.735e-79
Identity = 123/155 (79.35%), Postives = 132/155 (85.16%), Query Frame = 0 
Query:    1 MVREHNS---GWPPIGAPLNVQRNEYDERWSS-FDNSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSPP---STVWTRPRHSQLPFNAKLSHPSPKMSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWPSHQHSTFPCSTYNTLPNINQ 148
            MVREHNS   GWPPIGAPLN+QR+EYD+ WSS FD+SVNAVSFGFVATAILISMFLVMAIFE+FLKP SPP   S  W R R SQ+ FN K+ HPSPKMSLYASWVSVLMPGDE PSFIAHPAPAPCCPERISWP HQHS+ P STY T+ NINQ
Sbjct:    1 MVREHNSISSGWPPIGAPLNMQRDEYDQHWSSSFDSSVNAVSFGFVATAILISMFLVMAIFERFLKPTSPPLLPSADWNRRRSSQMAFNGKIGHPSPKMSLYASWVSVLMPGDETPSFIAHPAPAPCCPERISWPPHQHSSVPYSTYTTMHNINQ 155
[Close]
BLAST of Cc_v2.0_19944.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445I9G5|A0A445I9G5_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_031668 PE=4 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 3.776e-79
Identity = 123/155 (79.35%), Postives = 131/155 (84.52%), Query Frame = 0 
Query:    1 MVREHN--SGWPPIGAPL-NVQRNEYDERWSSFDNSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSPP---STVWTRPRHSQLPFNAKLSHPSPKMSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWPSHQHSTFPCSTYNTLPNINQA 149
            MVREHN  SGWPPIGAPL NVQR+EYD+ WSSFD+SVNAVSFGFVATAIL+SMFLVMAIFE+FLKP SPP   S    R R SQ+ FN KL HPSPKMSLYASWVSVLMPGD  PSFIAHP PAPCCPERISWPSHQHST P STYNT+P+IN  
Sbjct:    1 MVREHNINSGWPPIGAPLLNVQRDEYDQHWSSFDSSVNAVSFGFVATAILVSMFLVMAIFERFLKPTSPPILPSGGRNRRRSSQMDFNGKLGHPSPKMSLYASWVSVLMPGDATPSFIAHPVPAPCCPERISWPSHQHSTLPYSTYNTMPSINHV 155
[Close]
BLAST of Cc_v2.0_19944.1 vs. ExPASy TrEMBL (2024)
Match: tr|C6T344|C6T344_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100527043 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 3.776e-79
Identity = 123/155 (79.35%), Postives = 131/155 (84.52%), Query Frame = 0 
Query:    1 MVREHN--SGWPPIGAPL-NVQRNEYDERWSSFDNSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSPP---STVWTRPRHSQLPFNAKLSHPSPKMSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWPSHQHSTFPCSTYNTLPNINQA 149
            MVREHN  SGWPPIGAPL NVQR+EYD+ WSSFD+SVNAVSFGFVATAIL+SMFLVMAIFE+FLKP SPP   S    R R SQ+ FN KL HPSPKMSLYASWVSVLMPGD  PSFIAHP PAPCCPERISWPSHQHST P STYNT+P+IN  
Sbjct:    1 MVREHNINSGWPPIGAPLLNVQRDEYDQHWSSFDSSVNAVSFGFVATAILVSMFLVMAIFERFLKPTSPPILPSGGRNRRRSSQMDFNGKLGHPSPKMSLYASWVSVLMPGDATPSFIAHPVPAPCCPERISWPSHQHSTLPYSTYNTMPSINHV 155
[Close]
BLAST of Cc_v2.0_19944.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7BQD8|V7BQD8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G189600g PE=4 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 6.257e-79
Identity = 124/155 (80.00%), Postives = 132/155 (85.16%), Query Frame = 0 
Query:    1 MVREHNS---GWPPIGAPLNVQRNEYDERWSS-FDNSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSPP---STVWTRPRHSQLPFNAKLSHPSPKMSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWPSHQHSTFPCSTYNTLPNINQ 148
            MVREHNS   GWPPIGAPLNVQR+EYD+ WSS FD+SVNAVSFGFVATAILISMFLVMAIFE+FLKP SPP   S  W R R SQ+ FN KLSH SPKMSLYASWVSVLMPGDE PSFIAHPAPAPCCPERISWP HQHS+ P ST+N + NINQ
Sbjct:    1 MVREHNSISSGWPPIGAPLNVQRDEYDQHWSSSFDSSVNAVSFGFVATAILISMFLVMAIFERFLKPASPPLLPSGDWNRRRSSQMAFNGKLSHRSPKMSLYASWVSVLMPGDETPSFIAHPAPAPCCPERISWPPHQHSSLPYSTHNPMSNINQ 155
[Close]
BLAST of Cc_v2.0_19944.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KH99|A0A4D6KH99_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g329 PE=4 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 9.916e-78
Identity = 122/155 (78.71%), Postives = 131/155 (84.52%), Query Frame = 0 
Query:    1 MVREHNS---GWPPIGAPLNVQRNEYDERWSS-FDNSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSPP---STVWTRPRHSQLPFNAKLSHPSPKMSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWPSHQHSTFPCSTYNTLPNINQ 148
            MVREHNS    WPPIGAPLN+QR+EYD+ WSS FD+SVNAVSFGFVATAILISMFLVMAIFE+FLKP SPP   S  W R R SQ+ FN KL+HPSPKMSLYASWVSVLMPGDE PSFIAHPAPAPCCPERI WP HQHS+ P STY T+ NINQ
Sbjct:    1 MVREHNSISSEWPPIGAPLNMQRDEYDQHWSSSFDSSVNAVSFGFVATAILISMFLVMAIFERFLKPTSPPLLPSADWNRRRSSQMAFNGKLAHPSPKMSLYASWVSVLMPGDETPSFIAHPAPAPCCPERIPWPPHQHSSVPYSTYTTMHNINQ 155
[Close]
BLAST of Cc_v2.0_19944.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8K7S4|A0A8B8K7S4_ABRPR (Uncharacterized protein LOC113853048 OS=Abrus precatorius OX=3816 GN=LOC113853048 PE=4 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.322e-71
Identity = 114/153 (74.51%), Postives = 130/153 (84.97%), Query Frame = 0 
Query:    1 MVREHNSGWPPIGAPLNVQRNEYDERWSSFDNSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSP---PSTVWTRPRHSQLPFNAKLSHPSPKMSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWPSH-QHSTFPCSTYNTLPNINQA 149
            +V++H++GWPPIGAPLN+QR+  D+RWS+FD SVNAVSFGFVATAILISMFLVMAIFE+FL+P SP   PS   TR R       AKL+HPSPKMSLYASWVSVLMPGDE+P+FIAHPAPAPCCPERISWPSH QH+T  CST NTLP+INQ 
Sbjct:   10 VVQDHDNGWPPIGAPLNLQRD--DQRWSNFDTSVNAVSFGFVATAILISMFLVMAIFERFLRPTSPLLSPSGRRTRRRLD----CAKLAHPSPKMSLYASWVSVLMPGDEIPTFIAHPAPAPCCPERISWPSHQQHNTINCSTSNTLPSINQV 156
[Close]
BLAST of Cc_v2.0_19944.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KZR2|A0A8B8KZR2_ABRPR (Uncharacterized protein LOC113859249 OS=Abrus precatorius OX=3816 GN=LOC113859249 PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.425e-64
Identity = 105/155 (67.74%), Postives = 123/155 (79.35%), Query Frame = 0 
Query:    1 MVREHNS--GWPPIGAPLNVQRNEYDERWSSFDNSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSPPSTVWTR----PRHSQLPFNAKLSHPSPKMSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWPSHQHSTFPCSTYNTLPNINQA 149
            +V EH++  GWPPIGAPLNV +   DE W++FD+SVNAVSFGFVATAILISMFLVMAIFE+FL+P SPP +   R       +Q+ F  KL HPSPKMS+YAS VSVLMPGDE+P+FIAH   APCCPER+SWPSHQH T PCST NT+PNIN+ 
Sbjct:    2 VVEEHSNVNGWPPIGAPLNVHK---DEHWTNFDSSVNAVSFGFVATAILISMFLVMAIFERFLRPTSPPLSPSGRRSPPDAEAQIGFTGKLGHPSPKMSVYASGVSVLMPGDEIPTFIAH--HAPCCPERMSWPSHQHDTLPCSTSNTIPNINEV 151
[Close]
BLAST of Cc_v2.0_19944.1 vs. Araport11
Match: | (Symbols: DEG23 | | chr1:3715229-3717320 FORWARD LENGTH=161)

HSP 1 Score: 138.272 bits (347), Expect = 2.525e-42
Identity = 77/139 (55.40%), Postives = 96/139 (69.06%), Query Frame = 0 
Query:    6 NSGWPPIGAPLNVQRNEYDERWSS-FDNSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSPPSTVWTRPRHSQLP-------FNA---KLSHPSPKMSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWPSHQHS 133
            N  WPPIGAP+N++R   +E W S FD+SVNAVSFGFVATAILISMFLVMAIFE+ ++  +  +T         LP       FN    KL + SPKM++Y++ VSVLMPGD++P+FIAHPAP PC P+ IS   HQH 
Sbjct:   12 NHQWPPIGAPMNLRR---EEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIRTTTTSTTNSDSSSSRVLPGMDSRVGFNGAATKLGYQSPKMTVYSNGVSVLMPGDDIPTFIAHPAPVPCPPQNISQSQHQHG 147
[Close]
BLAST of Cc_v2.0_19944.1 vs. Araport11
Match: | (Symbols: DEG23 | | chr1:3715229-3717320 FORWARD LENGTH=187)

HSP 1 Score: 125.176 bits (313), Expect = 9.671e-37
Identity = 77/165 (46.67%), Postives = 96/165 (58.18%), Query Frame = 0 
Query:    6 NSGWPPIGAPLNVQRNEYDERWSS-FDNSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSPPSTVWTRPRHSQLP-------FNA---KLSHPSPK--------------------------MSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWPSHQHS 133
            N  WPPIGAP+N++R   +E W S FD+SVNAVSFGFVATAILISMFLVMAIFE+ ++  +  +T         LP       FN    KL + SPK                          M++Y++ VSVLMPGD++P+FIAHPAP PC P+ IS   HQH 
Sbjct:   12 NHQWPPIGAPMNLRR---EEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIRTTTTSTTNSDSSSSRVLPGMDSRVGFNGAATKLGYQSPKASNNRIVFSFSFNILKSELFIVIILRMTVYSNGVSVLMPGDDIPTFIAHPAPVPCPPQNISQSQHQHG 173
[Close]
BLAST of Cc_v2.0_19944.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:21446237-21447059 REVERSE LENGTH=115)

HSP 1 Score: 83.1889 bits (204), Expect = 3.032e-21
Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 0 
Query:   32 NSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSPPSTVWTRPRHSQLPFNAKLSHPSPKMSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWPSH 130
            +S+NA+SFGFVATAILI MF++MAI E   +     S         Q     KL+  +  + +  S VSV+MPGD++PS++A PAP PC  E I WPSH
Sbjct:   21 SSMNAISFGFVATAILILMFIIMAILEHLFRSDHSSSYDVDDSSQFQ-----KLAEKASMVPVTTSDVSVVMPGDKLPSYVALPAPFPCRREGIRWPSH 114
[Close]
BLAST of Cc_v2.0_19944.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:21446237-21447059 REVERSE LENGTH=115)

HSP 1 Score: 83.1889 bits (204), Expect = 3.032e-21
Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 0 
Query:   32 NSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSPPSTVWTRPRHSQLPFNAKLSHPSPKMSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWPSH 130
            +S+NA+SFGFVATAILI MF++MAI E   +     S         Q     KL+  +  + +  S VSV+MPGD++PS++A PAP PC  E I WPSH
Sbjct:   21 SSMNAISFGFVATAILILMFIIMAILEHLFRSDHSSSYDVDDSSQFQ-----KLAEKASMVPVTTSDVSVVMPGDKLPSYVALPAPFPCRREGIRWPSH 114
[Close]
BLAST of Cc_v2.0_19944.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:21446237-21447059 REVERSE LENGTH=115)

HSP 1 Score: 83.1889 bits (204), Expect = 3.032e-21
Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 0 
Query:   32 NSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSPPSTVWTRPRHSQLPFNAKLSHPSPKMSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWPSH 130
            +S+NA+SFGFVATAILI MF++MAI E   +     S         Q     KL+  +  + +  S VSV+MPGD++PS++A PAP PC  E I WPSH
Sbjct:   21 SSMNAISFGFVATAILILMFIIMAILEHLFRSDHSSSYDVDDSSQFQ-----KLAEKASMVPVTTSDVSVVMPGDKLPSYVALPAPFPCRREGIRWPSH 114
[Close]
BLAST of Cc_v2.0_19944.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:3187817-3188580 FORWARD LENGTH=128)

HSP 1 Score: 80.4925 bits (197), Expect = 4.721e-20
Identity = 48/101 (47.52%), Postives = 58/101 (57.43%), Query Frame = 0 
Query:   32 NSVNAVSFGFVATAILISMFLVMAIFEKFLKPHS----PPSTVWTRPRHSQLPFNAKLSHPSPKMSLYASWVSVLMPGDEVPSFIAHPAPAPCCPERISWP 128
             S+NA+SFGFVATAILISMFL+MAIFE   +P +     P  +  R R     F       S         VSV+MPG+++PS IA PAP PC  E I WP
Sbjct:   25 TSMNAISFGFVATAILISMFLIMAIFEHLFRPENSSFDSPHQIRQRQRDGSSQFQKLADQASMVPVSTVVDVSVVMPGEKLPSHIALPAPLPCRREGIHWP 125
[Close]
BLAST of Cc_v2.0_19944.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:13981635-13982575 FORWARD LENGTH=143)

HSP 1 Score: 73.1738 bits (178), Expect = 5.410e-17
Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 0 
Query:   24 DERWSSFDNSVNAVSFGFVATAILISMFLVMAIFEKFLKPHSPPSTVWTRPRHSQLPFNAKLSHPSPKMSLYASWVSVLMPGDEVPSFIAHPAP 117
            +E    F++SVNAV FG VAT +LI++FL++A FE+F+     PS     P   + P  A     SPKM +    +SVLMPG++VP+FIA P P
Sbjct:   51 EEGQGRFESSVNAVPFGLVATGVLIAIFLLIAFFERFMFVKPTPSP----PLDQKFPPFA-----SPKMDVCKREISVLMPGEDVPTFIAQPCP 135
[Close]
BLAST of Cc_v2.0_19944.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:21446350-21447059 REVERSE LENGTH=53)

HSP 1 Score: 45.4394 bits (106), Expect = 2.380e-7
Identity = 20/31 (64.52%), Postives = 26/31 (83.87%), Query Frame = 0 
Query:   32 NSVNAVSFGFVATAILISMFLVMAIFEKFLK 62
            +S+NA+SFGFVATAILI MF++MAI E   +
Sbjct:   21 SSMNAISFGFVATAILILMFIIMAILEHLFR 51
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_19944.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|I1MEC9|I1MEC9_SOYBN3.418e-8179.22Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A1S3VIE4|A0A1S3VIE4_VIGRR6.831e-8080.00Uncharacterized protein LOC106775443 OS=Vigna radi... [more]
tr|A0A371ES75|A0A371ES75_MUCPR1.022e-7978.57Uncharacterized protein (Fragment) OS=Mucuna pruri... [more]
tr|A0A0S3S2I0|A0A0S3S2I0_PHAAN1.735e-7979.35Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A445I9G5|A0A445I9G5_GLYSO3.776e-7979.35Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|C6T344|C6T344_SOYBN3.776e-7979.35Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|V7BQD8|V7BQD8_PHAVU6.257e-7980.00Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A4D6KH99|A0A4D6KH99_VIGUN9.916e-7878.71Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|A0A8B8K7S4|A0A8B8K7S4_ABRPR2.322e-7174.51Uncharacterized protein LOC113853048 OS=Abrus prec... [more]
tr|A0A8B8KZR2|A0A8B8KZR2_ABRPR2.425e-6467.74Uncharacterized protein LOC113859249 OS=Abrus prec... [more]
back to top
BLAST of Cc_v2.0_19944.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Cc_v2.0_19944.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 8
Match NameE-valueIdentityDescription
|2.525e-4255.40Symbols: DEG23 | | chr1:3715229-3717320 FORWARD L... [more]
|9.671e-3746.67Symbols: DEG23 | | chr1:3715229-3717320 FORWARD L... [more]
|3.032e-2146.46Symbols: no symbol available | no full name availa... [more]
|3.032e-2146.46Symbols: no symbol available | no full name availa... [more]
|3.032e-2146.46Symbols: no symbol available | no full name availa... [more]
|4.721e-2047.52Symbols: no symbol available | no full name availa... [more]
|5.410e-1744.68Symbols: no symbol available | no full name availa... [more]
|2.380e-764.52Symbols: no symbol available | no full name availa... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33728CTTNBP 2 AMINO-TERMINAL-LIKE PROTEINcoord: 11..135

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_19944.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19944.1; Name=Cc_v2.0_19944.1; organism=Cajanus cajan; type=mRNA; length=450bp
ATGGTAAGAGAGCATAACAGTGGATGGCCTCCAATAGGGGCCCCACTGAA
CGTGCAGAGAAACGAATATGATGAGCGTTGGAGCAGCTTCGACAACTCTG
TCAACGCTGTTTCTTTTGGCTTTGTTGCCACTGCCATTCTCATCTCCATG
TTCTTAGTCATGGCTATCTTCGAGAAGTTCCTCAAACCACACTCCCCGCC
CTCCACCGTCTGGACCCGCCCTCGTCACTCTCAGCTCCCCTTCAACGCCA
AGCTTTCCCACCCCTCACCCAAAATGAGTTTGTATGCTAGCTGGGTTTCA
GTTTTAATGCCTGGAGATGAAGTTCCTTCTTTCATTGCCCACCCTGCCCC
CGCACCATGTTGCCCTGAAAGGATATCATGGCCTTCCCATCAACATAGCA
CATTCCCTTGTTCCACTTACAACACCCTTCCTAATATCAACCAAGCATAA
back to top

protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_19944.1

>drCajCajn.Asha.2.0.Cc_v2.0_19944.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19944.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_19944.1; organism=Cajanus cajan; type=polypeptide; length=149bp
MVREHNSGWPPIGAPLNVQRNEYDERWSSFDNSVNAVSFGFVATAILISM
FLVMAIFEKFLKPHSPPSTVWTRPRHSQLPFNAKLSHPSPKMSLYASWVS
VLMPGDEVPSFIAHPAPAPCCPERISWPSHQHSTFPCSTYNTLPNINQA
back to top

mRNA from alignment at CcLG08_v2.0:59499845..59503592+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_19944.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19944.1; Name=Cc_v2.0_19944.1; organism=Cajanus cajan; type=mRNA; length=3748bp; location=Sequence derived from: CcLG08_v2.0:59499845..59503592+ (Cajanus cajan
TCCCCAGACAGAACCAAAAGACAAGACCTATCTATCCAAATTCCAAAGTT
TATACTTTTTTCACACCCCACATGCTTGCTTCTCTCTCCAACCCCAAATT
AACAGAGCAATTGAGAACTATAAGACCAAACCTTAACTTCTTGCAACTCT
GTTCTTCCCTGGTTTGGTTTTAGTTACCACCTCCATCTCTCTCCCATTCT
CTTGTGTAGAGTTCTTCTTCAACTCCAAGAATGGTAAAACGGAGTTGAGC
AAAGCAAAGAAAGAATGGTAAGAGAGCATAACAGTGGATGGCCTCCAATA
GGGGCCCCACTGAACGTGCAGAGAAACGAATATGATGAGCGTTGGAGCAG
CTTCGACAACTCTGTCAACGCTGTTTCTTTTGGCTTTGTTGCCACTGCCA
TTCTCATCTCCATGTTCTTAGTCATGGCTATCTTCGAGAAGTTCCTCAAA
CCACACTCCCCGCCCTCCACCGTCTGGACCCGCCCTCGTCACTCTCAGCT
CCCCTTCAACGCCAAGCTTTCCCACCCCTCACCCAAAGTGAGTCTTCAAA
ATCTCATCTTTCACTCAATCTCTCTCTTGGGGTGTGCAGTGTGCGTGTGA
GCATTCACTCTTCATTACAGTTTCATCACAATGACAATGTGAAAGCCttc
ttcttttttttttttttttttttgcttttGGCTTGGTTCTTCTCTTTTCC
CAGTTGCTAATGGTGGACATTTTGAGAAAAAAAAAAAGGATTTTCTCTTT
CTTCTTCCACTTCAGGATGCTTTTAATTCGGGTAGTTATTTTGGTTTTTG
GGTGAGTGATGATTACTTATCTGACATAATGTTTTTTAACCTAATTATTT
GTTTGTTTCTAGGTTGCTTTTTTACTTGCTTCTTTTGCTGCTGAATGGTA
TCCCTCCCATAAATTTGCTTATGCTTTATTATGTTTGTACTGTATGTCtt
ctttttttttttttttttttttttttttttATAAATGAATTTCCCTGCCA
TGTGCATTTGACCAATTCAAGATGTTTCTGTTCTGTCCCTCATCATCTCT
ACCACTGTTATCATTATCAGAAGCATACCTTCTCGATCTCTTTTTGAGAC
ATTCTCTGCATTTTCTTGCTCCATTGGCTCTCATATCTTCCAACACTGGC
GTCTTCCATTAGAAATTTTCCTATTGGCCTAGCACTTAAGGGTGTTCATC
TTTCATCCTCAGACAGGCCAAACTATCACGTGTTTTTGTTTTTCTTAACA
TTAGTAAATAGATAAACTAGTAGTTTACTGCGTGTTTAGCCTTTTATGTC
CTCTTTGTGTGATTTATCCCCAAATTCTCTATAAGCAAGAAAAGGGGTAA
ATCTTGTCAAACCTGATTTTAGTATCGGACAAACCTTTTTACTCCCTGTA
TGTTTTTTGGCTATTTGAACTTAGGAACTCTATCATAACCCACCAAGTTt
tttcatttcattttccttgcatttacacgttcaGTCAAATACCTTAATTA
TGAGTGGATTGTGTTGTCTTATGCTTTTTACATGGACACGGTCCTCTTGA
GAAGTTTTCTATTGAATAATTGGTCCCTAGCCATGAGTTTTTGGACTTAT
TTATCCATCTTTCTGTATGAGTAGAGACCCACATTGGTGTCTTTGACATT
CAACTGCACCATCACCTCCAATCTTTAATGATACCATACATGGCCAATGT
TTGTGGCCATTGGCCTATAACTTTTTTATGAATTTGGACTTGCTAGTTTT
TAATGTACTTTCATATGATGGGCAAGTACCATTCAACATTTGTGTTGTCT
ACCTTATGCCATTACTTTGAAGAAACACTCCAGGCCCACCTACTTATGCA
ACCTCGCTGTTCTGTTGGAGGGCACCAACTTGATTGAGACATAGCCTGTA
GTGTTGTTTCTCTCAACTTTAACAAAATTATTAATGTGATTCTCTAGTAT
TAGCCACTAAGGTTAGGAATGCAAAAGTCCACAAATAATATAAAATTTAA
TAGTGTACTTTATTTGTTTGGCATTTTGATTACATTGGGAATTTTATTGT
GGTGTTAATGGAATACAGAATATGGGATTTAAAGAACATGCTTCTGCAAT
TAGACAGAAGTCAGGGATTCTTTTTATTGTTTATGGTAATGATGCCACTC
AAGCACTCAAAGACCACATGAGTAAGATTTTTCTTGTTAATGAAGTTATA
TGATATGAAAGTCACTTCAACATAATAGTAACAGGTCATGCCCTGTGGGA
AAAAAAAAATAGTGATGAATCGGACGAAAAAGGTAGGAATATTAATATGG
ACTTTGATTCTTGAATAGCTAATTGTAATACCCAGTGATCCAAAATCCAT
CTGTGACGAAGAGTATTTGCCTTTGTCAATATCTGGAGGAGGTACTTATT
TCAAGGTCACAAACTTATATTCTCAACTCAAGTGTTAAAGACGTAAAGAT
TTCAGTGATAACTATAAATTAGGAAAGCTCTCAACATTTCTGAGTATGCA
AGCATAGACTTTTTTAATCCAAAGGCAACTATCGTGCTTTTATTAATATA
TTTATTGGATCTATAATGTATTTGTTAATATCTAGGTGGACACGTTTAAT
CTTATTTGTTTAATAGTACCTAATTGTGTGTGTGTTAAAAGTCAAATAAG
TAATACGATGTTGGTGCCTTACATAGCATGTCCAGATTGGAAGTAAAGGG
AAATACCAATGTCGGGTTCGATGAATCTGTTGTTTCTGCTGTTTATTTTA
TTTCATTTTACACGTAAGTGATAAGCAATTAATTGGTTTCTCTTAGCTGA
AATTTACTGTTTTCCTTTTTACTAACCGAAAGTCCTAATGAATATGCTTA
TTGTGTTGAAGTTAAACTAGGAAAACTAATGCAGCTGTGGCTTCATCATA
TTTATTGACAAATGTGTATGACCAGATATATGATTGCAGGGATTAAATTG
CTTGCCCCTAAAAGAAGTCTTGTGGTTATCAACAACACATTTAATGTTAT
TCCCATGAATTTGTCATGTGATGTTTAAAGTAATGGCTTTAGAAACTTAA
AGAAAATACAAAAGCATTTGTTGCGTTCCTCCTAAGTTTGCAGTGGACAA
TGATATGCCAATCCCTTTCTAGTTTGATTTCTGGTCCACTCCTGGGGTAA
AATAATTCTTTCATTCCAACTATGTTGGACATCAAAATTAGATTCATCTA
TTGTAGAAGATACTAGTAATTTTTTTAGTTGGGTATTTAGAGCCAGAAAG
TTTTTCTATGCTAAACTTTTAAACCGATAAAGTTGATGTTTGATCAAATT
AAGTGAACTCACCAGGTTTTGTAACTTCTACAGATGAGTTTGTATGCTAG
CTGGGTTTCAGTTTTAATGCCTGGAGATGAAGTTCCTTCTTTCATTGCCC
ACCCTGCCCCCGCACCATGTTGCCCTGAAAGGATATCATGGCCTTCCCAT
CAACATAGCACATTCCCTTGTTCCACTTACAACACCCTTCCTAATATCAA
CCAAGCATAAGAGAATTCAACATGACAAGGTTCTGTAATGTGCATATAGC
ATCAAGGAGTTGATGAATTTTATGTGAAGAATGTTGTGTAGAAGCACTCT
TTATAGTTTATAAGATACCATGTATATAGGATTTAATTTAGTGCAAATAG
GATTTGGTAATGAAGCTTTGAGGTTTTGAATGCATGGAATGGTTGTGCAT
GTAATTAGCAATAATTATGTTGCCGATATTTTCAGATTTATGGTAGTA
back to top

Coding sequence (CDS) from alignment at CcLG08_v2.0:59499845..59503592+

>drCajCajn.Asha.2.0.Cc_v2.0_19944.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19944.1; Name=Cc_v2.0_19944.1; organism=Cajanus cajan; type=CDS; length=450bp; location=Sequence derived from: CcLG08_v2.0:59499845..59503592+ (Cajanus cajan
ATGGTAAGAGAGCATAACAGTGGATGGCCTCCAATAGGGGCCCCACTGAA
CGTGCAGAGAAACGAATATGATGAGCGTTGGAGCAGCTTCGACAACTCTG
TCAACGCTGTTTCTTTTGGCTTTGTTGCCACTGCCATTCTCATCTCCATG
TTCTTAGTCATGGCTATCTTCGAGAAGTTCCTCAAACCACACTCCCCGCC
CTCCACCGTCTGGACCCGCCCTCGTCACTCTCAGCTCCCCTTCAACGCCA
AGCTTTCCCACCCCTCACCCAAAATGAGTTTGTATGCTAGCTGGGTTTCA
GTTTTAATGCCTGGAGATGAAGTTCCTTCTTTCATTGCCCACCCTGCCCC
CGCACCATGTTGCCCTGAAAGGATATCATGGCCTTCCCATCAACATAGCA
CATTCCCTTGTTCCACTTACAACACCCTTCCTAATATCAACCAAGCATAA
back to top