Cc_v2.0_23372.1

Transcript Overview
NameCc_v2.0_23372.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_23372.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length453
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG10_v2.0chromosomeCcLG10_v2.0:2636452..2640135 -Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anccaL0072Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL169Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0590Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0695Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL610Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0861Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0913Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0917Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL1133Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL010Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR088Pisum sativum Cameor genome v1aPisum sativum
ccapsR089Pisum sativum Cameor genome v1aPisum sativum
ccapsR110Pisum sativum Cameor genome v1aPisum sativum
ccavrvR074Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccapvR094Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavrvR095Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR096Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR125Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR100Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavfhR119Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavssR088Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR107Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR122Vicia sativa cv. Studenica genome v1.0Vicia sativa
carccaL549Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavuR080Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR084Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR095Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR098Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR099Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR124Vigna umbellata FF25 genome v1.0Vigna umbellata
ccccaL0372Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL0519Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL0524Cajanus cajan Asha genome v1.0Cajanus cajan
ccavunR073Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR091Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR108Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccavunR094Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR112Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR122Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.5g010960.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.Ca_v2.0_22540Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Phvul.010G142300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014644283.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.005G161300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va11G003040.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vum_07G00233.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun05g277400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat5g294280.1Pisum sativum Cameor genome v1aPisum sativum
Vum_09G01379.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-TanjilR_31612Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun10g176500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va05G053510.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
PvulFLAVERTChr10.1608Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigun05g277400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-TanjilR_04429Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat4g194560.1Pisum sativum Cameor genome v1aPisum sativum
Vigun10g176500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
jg16369.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
jg9945.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.4g066040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
PvulFLAVERTChr05.1033Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_000268Cajanus cajan Asha genome v1.0Cajanus cajan
rna-KK1_013763Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_23372drCajCajn.Asha.2.0.Cc_v2.0_23372Cajanus cajangene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_23372.1.exon4drCajCajn.Asha.2.0.Cc_v2.0_23372.1.exon4Cajanus cajanexon
Cc_v2.0_23372.1.exon3drCajCajn.Asha.2.0.Cc_v2.0_23372.1.exon3Cajanus cajanexon
Cc_v2.0_23372.1.exon2drCajCajn.Asha.2.0.Cc_v2.0_23372.1.exon2Cajanus cajanexon
Cc_v2.0_23372.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_23372.1.exon1Cajanus cajanexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_23372.1.utr3p1drCajCajn.Asha.2.0.Cc_v2.0_23372.1.utr3p1Cajanus cajanthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_23372.1drCajCajn.Asha.2.0.cds.Cc_v2.0_23372.1Cajanus cajanCDS
cds.Cc_v2.0_23372.1drCajCajn.Asha.2.0.cds.Cc_v2.0_23372.1_2Cajanus cajanCDS
cds.Cc_v2.0_23372.1drCajCajn.Asha.2.0.cds.Cc_v2.0_23372.1_3Cajanus cajanCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_23372.1.utr5p2drCajCajn.Asha.2.0.Cc_v2.0_23372.1.utr5p2Cajanus cajanfive_prime_UTR
Cc_v2.0_23372.1.utr5p1drCajCajn.Asha.2.0.Cc_v2.0_23372.1.utr5p1Cajanus cajanfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_23372.1drCajCajn.Asha.2.0.Cc_v2.0_23372.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_23372.1drCajCajn.Asha.2.0.Cc_v2.0_23372.1-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151SU68|A0A151SU68_CAJCA (Large ribosomal subunit protein eL28 OS=Cajanus cajan OX=3821 GN=KK1_013763 PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 2.468e-104
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVKVPGRK 150
            MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVKVPGRK
Sbjct:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVKVPGRK 150
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1MCX7|I1MCX7_SOYBN (Large ribosomal subunit protein eL28 OS=Glycine max OX=3847 GN=GLYMA_15G022700 PE=3 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 1.005e-98
Identity = 141/150 (94.00%), Postives = 148/150 (98.67%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVKVPGRK 150
            MATVPGQLIWE+VKKNN+FLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVT+ PAGKDQSVLLATTKTKKQNKP+ALLHKSVMKKEFRRMAK+VQNQVADNYYRPDLKKAALARLSAV+RSL+VAKSGVKKRNRQAVKVP RK
Sbjct:    1 MATVPGQLIWEVVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTVQPAGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKKAALARLSAVNRSLRVAKSGVKKRNRQAVKVPSRK 150
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445IES0|A0A445IES0_GLYSO (Large ribosomal subunit protein eL28 OS=Glycine soja OX=3848 GN=D0Y65_032711 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.794e-98
Identity = 140/150 (93.33%), Postives = 148/150 (98.67%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVKVPGRK 150
            M+TVPGQLIWEIVKKNN+FLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLAN+KTVT+ PAGKDQSVLLATTKTKKQNKP+ALLHKSVMKKEFRRMAK+VQNQVADNYYRPDLKKAALARLSAV+RSL+VAKSGVKKRNRQAVKVP RK
Sbjct:    1 MSTVPGQLIWEIVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANQKTVTVQPAGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKKAALARLSAVNRSLRVAKSGVKKRNRQAVKVPSRK 150
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy TrEMBL (2024)
Match: tr|C6T0W1|C6T0W1_SOYBN (Large ribosomal subunit protein eL28 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 4.673e-98
Identity = 140/150 (93.33%), Postives = 147/150 (98.00%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVKVPGRK 150
            MATVPGQLIWE+VKKNN+FLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVT+ P GKDQSVLLATTKTKKQNKP+ALLHKSVMKKEFRRMAK+VQNQVADNYYRPDLKKAALARLSAV+RSL+VAKSGVKKRNRQAVKVP RK
Sbjct:    1 MATVPGQLIWEVVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTVQPTGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKKAALARLSAVNRSLRVAKSGVKKRNRQAVKVPSRK 150
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445GN13|A0A445GN13_GLYSO (Large ribosomal subunit protein eL28 OS=Glycine soja OX=3848 GN=D0Y65_039740 PE=3 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 4.883e-98
Identity = 140/150 (93.33%), Postives = 147/150 (98.00%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVKVPGRK 150
            MATVPGQLIWE+VKKNN+FLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVT+ PAGKDQSVLLATTKTKKQNKP+ LLHKSVMKKEFRRMAK+VQNQVADNYYRPDLKKAALARLSAV+RSL+VAKSGVKKRNRQAVKVP RK
Sbjct:    1 MATVPGQLIWEVVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTVQPAGKDQSVLLATTKTKKQNKPAVLLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKKAALARLSAVNRSLRVAKSGVKKRNRQAVKVPSRK 150
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3U190|A0A1S3U190_VIGRR (Large ribosomal subunit protein eL28 OS=Vigna radiata var. radiata OX=3916 GN=LOC106760851 PE=3 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 6.567e-98
Identity = 141/150 (94.00%), Postives = 148/150 (98.67%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVKVPGRK 150
            MATVPGQLIWEIVKKNN+FLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTI PAGKDQSV+LATTKT+KQNKP++LLHKSVMKKEFRRMAK+VQNQVADNYYRPDLKKAALARLSAV+RSLKVAKSGVKKRNRQAVKV GRK
Sbjct:    1 MATVPGQLIWEIVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTIQPAGKDQSVILATTKTRKQNKPASLLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKKAALARLSAVNRSLKVAKSGVKKRNRQAVKVVGRK 150
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1M5E1|I1M5E1_SOYBN (Large ribosomal subunit protein eL28 OS=Glycine max OX=3847 GN=100499963 PE=3 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 8.360e-98
Identity = 139/150 (92.67%), Postives = 148/150 (98.67%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVKVPGRK 150
            M+TVPGQLIWEIVKKNN+FLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLAN+KTVT+ PAGKDQSVLLATTKTKKQNKP+ALLHKSVMKKEFRRMAK+VQNQVADNYYRPDLK+AALARLSAV+RSL+VAKSGVKKRNRQAVKVP RK
Sbjct:    1 MSTVPGQLIWEIVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANQKTVTVQPAGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKRAALARLSAVNRSLRVAKSGVKKRNRQAVKVPSRK 150
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UNT2|A0A0L9UNT2_PHAAN (Large ribosomal subunit protein eL28 OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0213210 PE=3 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.597e-97
Identity = 140/150 (93.33%), Postives = 146/150 (97.33%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVKVPGRK 150
            M TVPGQLIWEIVKKNN+FLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTI PAGKDQSV+LATTKT+KQNKP++LLHKSVMKKEFRRMAK+VQNQVADNYYRPDLKKAALARLSAV RSLKVAKSGVKKRNRQAVKV GRK
Sbjct:    1 MTTVPGQLIWEIVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTIQPAGKDQSVILATTKTRKQNKPASLLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKKAALARLSAVDRSLKVAKSGVKKRNRQAVKVAGRK 150
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SKZ1|A0AA86SKZ1_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS16089 PE=4 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 4.059e-97
Identity = 140/150 (93.33%), Postives = 146/150 (97.33%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVKVPGRK 150
            M+TVPGQLIWEIVKKNN FLVKEFGRGTQSV+FSREPNNLYNLNTFKYSGLANKKTVTI  AGKDQSVLLATTKTKKQNKP++LLHKSVMKKEFRRMAK+VQNQVADNYYRPDLKKAALARLSAV+RSLKVAKSGVKKRNRQAVKV GRK
Sbjct:    1 MSTVPGQLIWEIVKKNNCFLVKEFGRGTQSVEFSREPNNLYNLNTFKYSGLANKKTVTIQSAGKDQSVLLATTKTKKQNKPASLLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKKAALARLSAVNRSLKVAKSGVKKRNRQAVKVAGRK 150
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6N924|A0A4D6N924_VIGUN (Large ribosomal subunit protein eL28 OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g248 PE=3 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 1.672e-96
Identity = 139/150 (92.67%), Postives = 146/150 (97.33%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVKVPGRK 150
            M TVPGQLIWEIVKKNN+FLVKEFGRGTQS+QFSREPNNLYNLNTFKYSGLANKKTVTI PAGKDQSVLLATTKTKKQNKP++LLHKSVMKKEFRRMAK+VQNQV DNYYRPDLKKAALARLSAV+RSLKVAKSGVKKRNRQAV+V GRK
Sbjct:    1 MTTVPGQLIWEIVKKNNSFLVKEFGRGTQSLQFSREPNNLYNLNTFKYSGLANKKTVTIQPAGKDQSVLLATTKTKKQNKPASLLHKSVMKKEFRRMAKAVQNQVGDNYYRPDLKKAALARLSAVNRSLKVAKSGVKKRNRQAVRVVGRK 150
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9M0E2|RL282_ARATH (Large ribosomal subunit protein eL28y OS=Arabidopsis thaliana OX=3702 GN=RPL28C PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.065e-73
Identity = 105/143 (73.43%), Postives = 123/143 (86.01%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQA 143
            MATVPGQLIWEIVK+NN FLVK+FGRG   VQFS+E NNL N+N++K+SGLANKKTVTI  AGKDQ V+L TTKTK+QNKP   ++KS++KKEF RM+K V NQV DNYYRPDLKKAALARLSA+ + L+VAKSG K+RNRQA
Sbjct:    1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALARLSAISKGLRVAKSGPKRRNRQA 143
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O82204|RL281_ARATH (Large ribosomal subunit protein eL28z OS=Arabidopsis thaliana OX=3702 GN=RPL28A PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 6.085e-73
Identity = 105/143 (73.43%), Postives = 124/143 (86.71%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQA 143
            MATVPGQLIWEIVK NN FLVK+FGRG   VQFS+E NNL N++++K+SGLANKKTVTI  A KDQ+V+LATTKTKKQNKP   ++KS++KKEF RM+K+V NQV DNYYRPDLKKAALARLSA+ + L+VAKSG K+RNRQA
Sbjct:    1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALARLSAISKGLRVAKSGAKQRNRQA 143
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P46779|RL28_HUMAN (Large ribosomal subunit protein eL28 OS=Homo sapiens OX=9606 GN=RPL28 PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 1.363e-19
Identity = 45/125 (36.00%), Postives = 73/125 (58.40%), Query Frame = 0 
Query:    6 GQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLK 130
              L W +V+  ++FL+K   R  Q+  +S EPNNL   N+F+Y+GL ++KTV + PA   + V++   +   Q KP+    ++ + K  R    S+++ +  N YRPDL+ AA+ R SA+ RS K
Sbjct:    3 AHLQWMVVRNCSSFLIK---RNKQT--YSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQK 122
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P41105|RL28_MOUSE (Large ribosomal subunit protein eL28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.439e-19
Identity = 45/125 (36.00%), Postives = 73/125 (58.40%), Query Frame = 0 
Query:    6 GQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLK 130
              L W +V+  ++FL+K   R  Q+  +S EPNNL   N+F+Y+GL ++KTV + PA   + V++   +   Q KP+    ++ + K  R    S+++ +  N YRPDL+ AA+ R SA+ RS K
Sbjct:    3 AHLQWMVVRNCSSFLIK---RNKQT--YSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQK 122
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q3T0L7|RL28_BOVIN (Large ribosomal subunit protein eL28 OS=Bos taurus OX=9913 GN=RPL28 PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 1.535e-19
Identity = 45/125 (36.00%), Postives = 73/125 (58.40%), Query Frame = 0 
Query:    6 GQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLK 130
              L W +V+  ++FL+K   R  Q+  +S EPNNL   N+F+Y+GL ++KTV + PA   + V++   +   Q KP+    ++ + K  R    S+++ +  N YRPDL+ AA+ R SA+ RS K
Sbjct:    3 AHLQWMVVRNCSSFLIK---RNKQT--YSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQK 122
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O14069|RL28_SCHPO (Large ribosomal subunit protein eL28 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl44 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.466e-19
Identity = 48/129 (37.21%), Postives = 69/129 (53.49%), Query Frame = 0 
Query:    3 TVPGQLIWEIVKKNNAFLVK--EFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVM-KKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRS 128
            +V   LIW++++ NN FLVK  EFG     +QF+REP N+   N  ++SGL N K V +        VL+  T  K   KP+ L  K V+     R+  KS+  ++    YR DL K ++AR SA+  S
Sbjct:    2 SVSNDLIWQVIRDNNRFLVKRPEFG----GIQFNREPVNVSGKNAQRFSGLCNDKAVGVQANSPRGVVLITKTNPKNAQKPAKLFRKDVIANASSRKTYKSIAGRIGRTGYRDDLVKVSVARASAILSS 126
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|G1U7L1|RL28_RABIT (Large ribosomal subunit protein eL28 OS=Oryctolagus cuniculus OX=9986 GN=RPL28 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.173e-18
Identity = 44/125 (35.20%), Postives = 72/125 (57.60%), Query Frame = 0 
Query:    6 GQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLK 130
              L W +V+  ++FL+K   R  Q+  +S EPNNL   N+F+Y+GL ++KTV + PA   + V++   +   Q KP+    ++ + K  R    S+++ +  N Y PDL+ AA+ R SA+ RS K
Sbjct:    3 AHLQWMVVRNCSSFLIK---RNKQT--YSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYHPDLRMAAIRRASAILRSQK 122
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q962T2|RL28_SPOFR (Large ribosomal subunit protein eL28 OS=Spodoptera frugiperda OX=7108 GN=RpL28 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.718e-17
Identity = 49/127 (38.58%), Postives = 73/127 (57.48%), Query Frame = 0 
Query:    6 GQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEF----RRMAKSVQNQVADNYYRPDLKKAALARLSAVHRS 128
              L W I++ NNAFLVK+  R  +   FS+EPNN+ NLN+++Y+GL  KK V ++     +   +   K K  NKP+    K+ ++++F    RR    V+  +  N+YR DL KA L R SA+ RS
Sbjct:    3 SHLNWMIIRNNNAFLVKK--RNIKK-PFSKEPNNVTNLNSYRYNGLIQKKAVGVVENPDRKGFTVVYKKAKATNKPA----KNAVRRQFKAGARRSLYKVKRLLKANHYRTDLSKATLRRASAILRS 122
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9VZS5|RL28_DROME (Large ribosomal subunit protein eL28 OS=Drosophila melanogaster OX=7227 GN=RpL28 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.989e-17
Identity = 51/132 (38.64%), Postives = 76/132 (57.58%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVA 132
            MAT    L W I++ NNAFL+K+  R  +   FS EPNNL ++++++YSG+ +KKT+ ++PA   +       K K   +P+    +   K   RR  K ++N +  + YR DL +AAL R SAV RS K A
Sbjct:    1 MATS-SHLNWLIIRNNNAFLLKK--RDVKK-PFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKGFTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLRSQKPA 128
[Close]
BLAST of Cc_v2.0_23372.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P17702|RL28_RAT (Large ribosomal subunit protein eL28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4)

HSP 1 Score: 75.0998 bits (183), Expect = 7.736e-17
Identity = 43/125 (34.40%), Postives = 71/125 (56.80%), Query Frame = 0 
Query:    6 GQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLK 130
              L W +V+  ++FL+K   R  Q+  +S EPNNL   N+F+Y+GL ++KTV +      + V++   +   Q KP+    ++ + K  R    S+++ +  N YRPDL+ AA+ R SA+ RS K
Sbjct:    3 AHLQWMVVRNCSSFLIK---RNKQT--YSTEPNNLKARNSFRYNGLIHRKTVGVEAWPDGKGVVVVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQK 122
[Close]
BLAST of Cc_v2.0_23372.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:14468439-14469964 REVERSE LENGTH=143)

HSP 1 Score: 219.935 bits (559), Expect = 1.112e-74
Identity = 105/143 (73.43%), Postives = 123/143 (86.01%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQA 143
            MATVPGQLIWEIVK+NN FLVK+FGRG   VQFS+E NNL N+N++K+SGLANKKTVTI  AGKDQ V+L TTKTK+QNKP   ++KS++KKEF RM+K V NQV DNYYRPDLKKAALARLSA+ + L+VAKSG K+RNRQA
Sbjct:    1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALARLSAISKGLRVAKSGPKRRNRQA 143
[Close]
BLAST of Cc_v2.0_23372.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:14468439-14469964 REVERSE LENGTH=143)

HSP 1 Score: 219.935 bits (559), Expect = 1.112e-74
Identity = 105/143 (73.43%), Postives = 123/143 (86.01%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQA 143
            MATVPGQLIWEIVK+NN FLVK+FGRG   VQFS+E NNL N+N++K+SGLANKKTVTI  AGKDQ V+L TTKTK+QNKP   ++KS++KKEF RM+K V NQV DNYYRPDLKKAALARLSA+ + L+VAKSG K+RNRQA
Sbjct:    1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALARLSAISKGLRVAKSGPKRRNRQA 143
[Close]
BLAST of Cc_v2.0_23372.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:8511752-8512995 FORWARD LENGTH=143)

HSP 1 Score: 218.009 bits (554), Expect = 6.357e-74
Identity = 105/143 (73.43%), Postives = 124/143 (86.71%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQA 143
            MATVPGQLIWEIVK NN FLVK+FGRG   VQFS+E NNL N++++K+SGLANKKTVTI  A KDQ+V+LATTKTKKQNKP   ++KS++KKEF RM+K+V NQV DNYYRPDLKKAALARLSA+ + L+VAKSG K+RNRQA
Sbjct:    1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALARLSAISKGLRVAKSGAKQRNRQA 143
[Close]
BLAST of Cc_v2.0_23372.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:8511752-8512995 FORWARD LENGTH=143)

HSP 1 Score: 218.009 bits (554), Expect = 6.357e-74
Identity = 105/143 (73.43%), Postives = 124/143 (86.71%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQA 143
            MATVPGQLIWEIVK NN FLVK+FGRG   VQFS+E NNL N++++K+SGLANKKTVTI  A KDQ+V+LATTKTKKQNKP   ++KS++KKEF RM+K+V NQV DNYYRPDLKKAALARLSA+ + L+VAKSG K+RNRQA
Sbjct:    1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALARLSAISKGLRVAKSGAKQRNRQA 143
[Close]
BLAST of Cc_v2.0_23372.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:8511752-8512995 FORWARD LENGTH=143)

HSP 1 Score: 218.009 bits (554), Expect = 6.357e-74
Identity = 105/143 (73.43%), Postives = 124/143 (86.71%), Query Frame = 0 
Query:    1 MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKSVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQA 143
            MATVPGQLIWEIVK NN FLVK+FGRG   VQFS+E NNL N++++K+SGLANKKTVTI  A KDQ+V+LATTKTKKQNKP   ++KS++KKEF RM+K+V NQV DNYYRPDLKKAALARLSA+ + L+VAKSG K+RNRQA
Sbjct:    1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALARLSAISKGLRVAKSGAKQRNRQA 143
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_23372.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151SU68|A0A151SU68_CAJCA2.468e-104100.00Large ribosomal subunit protein eL28 OS=Cajanus ca... [more]
tr|I1MCX7|I1MCX7_SOYBN1.005e-9894.00Large ribosomal subunit protein eL28 OS=Glycine ma... [more]
tr|A0A445IES0|A0A445IES0_GLYSO3.794e-9893.33Large ribosomal subunit protein eL28 OS=Glycine so... [more]
tr|C6T0W1|C6T0W1_SOYBN4.673e-9893.33Large ribosomal subunit protein eL28 OS=Glycine ma... [more]
tr|A0A445GN13|A0A445GN13_GLYSO4.883e-9893.33Large ribosomal subunit protein eL28 OS=Glycine so... [more]
tr|A0A1S3U190|A0A1S3U190_VIGRR6.567e-9894.00Large ribosomal subunit protein eL28 OS=Vigna radi... [more]
tr|I1M5E1|I1M5E1_SOYBN8.360e-9892.67Large ribosomal subunit protein eL28 OS=Glycine ma... [more]
tr|A0A0L9UNT2|A0A0L9UNT2_PHAAN1.597e-9793.33Large ribosomal subunit protein eL28 OS=Phaseolus ... [more]
tr|A0AA86SKZ1|A0AA86SKZ1_9FABA4.059e-9793.33Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A4D6N924|A0A4D6N924_VIGUN1.672e-9692.67Large ribosomal subunit protein eL28 OS=Vigna ungu... [more]
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BLAST of Cc_v2.0_23372.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q9M0E2|RL282_ARATH1.065e-7373.43Large ribosomal subunit protein eL28y OS=Arabidops... [more]
sp|O82204|RL281_ARATH6.085e-7373.43Large ribosomal subunit protein eL28z OS=Arabidops... [more]
sp|P46779|RL28_HUMAN1.363e-1936.00Large ribosomal subunit protein eL28 OS=Homo sapie... [more]
sp|P41105|RL28_MOUSE1.439e-1936.00Large ribosomal subunit protein eL28 OS=Mus muscul... [more]
sp|Q3T0L7|RL28_BOVIN1.535e-1936.00Large ribosomal subunit protein eL28 OS=Bos taurus... [more]
sp|O14069|RL28_SCHPO9.466e-1937.21Large ribosomal subunit protein eL28 OS=Schizosacc... [more]
sp|G1U7L1|RL28_RABIT1.173e-1835.20Large ribosomal subunit protein eL28 OS=Oryctolagu... [more]
sp|Q962T2|RL28_SPOFR2.718e-1738.58Large ribosomal subunit protein eL28 OS=Spodoptera... [more]
sp|Q9VZS5|RL28_DROME6.989e-1738.64Large ribosomal subunit protein eL28 OS=Drosophila... [more]
sp|P17702|RL28_RAT7.736e-1734.40Large ribosomal subunit protein eL28 OS=Rattus nor... [more]
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BLAST of Cc_v2.0_23372.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
|1.112e-7473.43Symbols: no symbol available | no full name availa... [more]
|1.112e-7473.43Symbols: no symbol available | no full name availa... [more]
|6.357e-7473.43Symbols: no symbol available | no full name availa... [more]
|6.357e-7473.43Symbols: no symbol available | no full name availa... [more]
|6.357e-7473.43Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.390.110:FF:000002coord: 5..133
e-value: 1.4E-52
score: 179.1
NoneNo IPR availableGENE3D3.30.390.110coord: 6..133
e-value: 2.3E-45
score: 156.1
IPR029004Ribosomal eL28/Mak16PFAMPF01778Ribosomal_L28ecoord: 8..128
e-value: 3.8E-34
score: 129.1
IPR002672Large ribosomal subunit protein eL28PANTHERPTHR1054460S RIBOSOMAL PROTEIN L28coord: 1..149

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_23372.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_23372.1; Name=Cc_v2.0_23372.1; organism=Cajanus cajan; type=mRNA; length=453bp
ATGGCGACAGTACCTGGACAACTCATCTGGGAGATCGTGAAGAAGAACAA
CGCTTTCTTGGTGAAGGAGTTCGGAAGGGGCACTCAGAGCGTGCAGTTCA
GCAGAGAGCCCAACAATCTCTACAACCTCAACACTTTCAAGTACTCTGGT
TTGGCGAACAAGAAAACTGTTACTATCCTGCCTGCTGGTAAAGACCAATC
TGTGTTGCTGGCAACAACAAAGACAAAGAAGCAAAATAAGCCGAGTGCTT
TGCTTCACAAATCTGTCATGAAAAAGGAGTTCAGGAGGATGGCAAAGTCA
GTGCAAAATCAGGTTGCAGATAACTACTACAGGCCTGATCTGAAAAAGGC
AGCTCTGGCAAGGTTGAGCGCTGTGCATAGGAGCCTCAAAGTTGCCAAGT
CTGGTGTGAAGAAGAGAAACAGACAGGCTGTCAAGGTTCCTGGCAGGAAG
TGA
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_23372.1

>drCajCajn.Asha.2.0.Cc_v2.0_23372.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_23372.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_23372.1; organism=Cajanus cajan; type=polypeptide; length=150bp
MATVPGQLIWEIVKKNNAFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSG
LANKKTVTILPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKS
VQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVKVPGRK
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mRNA from alignment at CcLG10_v2.0:2636452..2640135-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_23372.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_23372.1; Name=Cc_v2.0_23372.1; organism=Cajanus cajan; type=mRNA; length=3684bp; location=Sequence derived from: CcLG10_v2.0:2636452..2640135- (Cajanus cajan
TTTTACTTGCTATAAATTCTGACAGAAAGAAAACACCCTCTTCCTCTTCA
CTCTCCACTGCGCAACAAGCGAAGGTTCTTCAGGTTTTGGTTTTTCTAAT
TGTTTTTGTTAGTGTTATCTTAAATTTACGCTTTGATCTGAATTTAGATC
TGGTGCGGTGTGTCTCAGGTGAGGAAGTAGAAGAAAATGGCGACAGTACC
TGGACAACTCATCTGGGAGATCGTGAAGAAGAACAACGCTTTCTTGGTGA
AGGAGTTCGGAAGGGGCACTCAGAGCGTGCAGTTCAGCAGAGAGCCCAAC
AATCTCTACAACCTCAACACTTTCAAGTACTCTGGTATGCCCTTGTCATC
TATTACGTCATTACAGTTTCAATTTTTTGATTTGTCATTCAGTTTTTGTG
TTTGGATGATTTGGTTATGCTTTTGATGTAAGGTGATCGATGAATGAACC
GTTATGTGTGTAGTGTTCTTGCGTTTCAATCGTTTGCGAGTGAAGCTCAC
TTAATGTTTGTGGTGGTGTGATAGGTTTGGCGAACAAGAAAACTGTTACT
ATCCTGCCTGCTGGTAAAGACCAATCTGTGTTGCTGGCAACAACAAAGAC
AAAGAAGCAAAATAAGCCGAGTGCTTTGCTTCACAAATCTGTCATGAAAA
AGGAGTTCAGGAGGATGGCAAAGTCAGTGCAAAATCAGGTAATTTGGGAG
AGAACTAAATTAGTTTCTCTGTATGTTTTTTAGGGTGACTTCCCTGTTTC
ATTTTATTGGTATGGACTATGGAGTAAATGATGTATAATGTCTTTTTTTT
TTTTGGTAGCTGCATATTTACGTTAGCCGTTATTCTCAGTAGCTAAATTT
GCTTTTTGTTTTAGCTTTGGCTTGTTGAAAAATGTTTTAAATTGTTGTGT
GCCTTTTTTTTCTTTTTGCATTTGACCATCATGTGTGCTGGGTTAACTAC
ATTTTCCCAGTCAAAAGCTGCTAGATGAAAGTTTTGGGGTTTGTCTTCAT
TTATGAGAAATTGTGTGTTCTTGCAGATCAATTACAAAATAATTTGATGC
GTTAAATTTTGTTGTGTATGTTTTATTGTTAGTTAAAGATGTCTTGTTTA
TCCAGTTTTTGGTGATTGCTGTATAGCTAGCTTAACATGTTGGACTTGAA
GGCATTTTGGTACAGCATAAGGGGGATTTGTGAAATATTTTTTGTACAAT
TCATCGTGTCTTTATTTTGAATGATTAAATTTTGTTGAGAAATATGACTG
TAGATGTTGTTTGGTACATGAAACCTTTTTAAACCTCCCACATAAATGAG
TTTTTCCTTGTGGTGATGAGGCTATAACATGTAAGCAGAAATCCGTAGTC
GGGTTTCTTCAATGAAATTTACTTGTTACGCTTGGATTCTGAGCTTTTAT
CATTCAGAAGTTCTTTCATGTTTTTTATTCCTTTCTGTAGTGCGACTATC
CTGTTTCATTTAAATGGTGTATGATTCTGGAAAGCTATTTTTATTCCTAT
TTGACAAAATTTGTTCTTTGGTAGCTGCATTTTTATTTGCTGTCAATCCC
AGTAGCTAAATATGCTTTTCAACTTGGCTTCAGCATCCTGGAAAAATATA
ACTACCTTTTTTTGTTGTTTTGATGTTGCAGTTAAATTTCAAATTGGTTT
AGTACTTCAACCTTTGTTATATGTCTTGTCTATCAAGATTTTGGCAACTT
GTGTGACTTTTGTTTTTGGGTGATGAAGCTTGCTTAACATGTAAACACTT
GAAAGCATTTTGGTACAACCTAAGGGGAAACTGACATGGTTTTGTACATT
AACGTACATGTTTTTATTTTAAATGAATTGTTTGTTGAGAAACATGACTG
CCAGATGTGTGATTTGGGAACCTCTGCTATGAGTGAGTTTTTCCCAGCGG
TGATGAGCCTCTAACATGTAAGAAGAAATCCTAGTCTGGGTTCTTCAATG
AAATTTACTTGTTACGCTTGGCTTCTGAGCTTTTATCTTTCAGAAGTTAT
TTCGTGATAGTAGTAATGCAATTATTAATGAAAAATTATGGCCTTTTTTT
CTTAATTAGGTATTACAGTATCTCCTTATGCTACCACAAAAATTATTATA
AAATGATTTTATTTCTTTTGTTCCGAATTATTTGGCAATCAATACCTTGT
CAATCTGCTTTGTGTTAATATGAAATTGTTTGTTTGGCTACCTCTCATGG
AATGTAGTAATGCAATTTTTAATACCAGCGGTGATGAGCCTCTAACATGT
AAGAAGAAATCTCTAGTTTGGTTTCTTCAATGAAATTTACTTGTTACGCT
TGGCTTCTGAGCTTTTTATCAATCAGAAGTTATTTCTTGAATGGAATAGT
GTAATTGTTAATAGAAGGATTCTGGCCTTTTTCATGTCTTAATTAACTAT
TACGGTATCACCCGATGCTGCCTGAAAAATTATTATAGAATAATTATGAG
TTAATTACCTATGCATTTATACTGGTAACTAATTATATCTTTTAATTGTG
TCATGTCACATTTAAAAGTAAATGTGTTTACAGTGATATGGTACAGTTAA
AAAATATAATTGGTTAGCAGTGTATAGGTGATTAACTCTAGTTTTATTTC
TTTTGTTCCGAATTATTTGGTAATCAATACCTTCTCAATCTTTGCAATTA
TCATAGAACGGTTTTATTTGTTTTCTACTGAATTCTTTGGCAATCAATAC
GAAGGCAATCTGCATTGTGTTAATATGTAATAGTTTGTTTGGCTGGCACA
CATAAATTGTTCTCATGAACATGTATGTTGTAAATGAACATAATGTGCGT
TTGCTCACATGCAATCTTAGGTTTATTTTTACACAGTTTTGTAATTTTAT
TTCATATTTTTGCTAGCTTGTTTACTAGTTCTTCTCTACTCGTTGAATGC
TTATTTTCTTTGATTTTTTATTTTTGTTAACTAGTTGTATAGCCCCGCGT
GTATGCACGTTGCTAATTGTGTCTTCTTATGTATTGCAGGTTGCAGATAA
CTACTACAGGCCTGATCTGAAAAAGGCAGCTCTGGCAAGGTTGAGCGCTG
TGCATAGGAGCCTCAAAGTTGCCAAGTCTGGTGTGAAGAAGAGAAACAGA
CAGGCTGTCAAGGTTCCTGGCAGGAAGTGAATTCACAAGACTTCAATTGC
ATTCTACATTTCTACCATCTTTTTGTAGTTTTTGTTCCAGAACTCAGATT
TTAGATTTGCGGAGTTTTGTTTGGAAAGGCAATTATTGTGTTTTCAATAT
ACAACTGGAACTACTATGTTATAGTTTTCAATCATTTTTTTTTTTACGAA
ACGGTTCAAGGATGGATGTTCTTGCTATGATCATATTTTTTGACAATGAC
GGCTTCTCTTAAACTGCACAGAAATTTGATTCCTTGAACATAAAAGGGAG
AAACAAGTCGTGGCCCATTAACAGTTTTTTTACTTTTACTAATTAGAACT
ATTTTTATAACCCTTGTAACTGGGTCAGAGTTCGTGTTGCTCATAATGAT
GCAGGAACAGCCCAATGCTTGCTACGATGTTGCTCGTTGAAAACGATAAT
GAAGTTTAAGTAAAATAATGAAGACTAGCTTTATATTTTGTAACGGAGTC
CCTATTTGTCGTCACGAGTGTTGAACTCTTTCCACATTAAACATTTATCC
TTTTTCTAGAAATGGAATCTCAAATTCATATGGC
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Coding sequence (CDS) from alignment at CcLG10_v2.0:2636452..2640135-

>drCajCajn.Asha.2.0.Cc_v2.0_23372.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_23372.1; Name=Cc_v2.0_23372.1; organism=Cajanus cajan; type=CDS; length=453bp; location=Sequence derived from: CcLG10_v2.0:2636452..2640135- (Cajanus cajan
ATGGCGACAGTACCTGGACAACTCATCTGGGAGATCGTGAAGAAGAACAA
CGCTTTCTTGGTGAAGGAGTTCGGAAGGGGCACTCAGAGCGTGCAGTTCA
GCAGAGAGCCCAACAATCTCTACAACCTCAACACTTTCAAGTACTCTGGT
TTGGCGAACAAGAAAACTGTTACTATCCTGCCTGCTGGTAAAGACCAATC
TGTGTTGCTGGCAACAACAAAGACAAAGAAGCAAAATAAGCCGAGTGCTT
TGCTTCACAAATCTGTCATGAAAAAGGAGTTCAGGAGGATGGCAAAGTCA
GTGCAAAATCAGGTTGCAGATAACTACTACAGGCCTGATCTGAAAAAGGC
AGCTCTGGCAAGGTTGAGCGCTGTGCATAGGAGCCTCAAAGTTGCCAAGT
CTGGTGTGAAGAAGAGAAACAGACAGGCTGTCAAGGTTCCTGGCAGGAAG
TGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR029004Ribosomal_eL28/Mak16
IPR002672Ribosomal_eL28
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome