Cc_v2.0_23409.1

Transcript Overview
NameCc_v2.0_23409.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_23409.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length1062
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG10_v2.0chromosomeCcLG10_v2.0:3012824..3016780 +Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anccaL0015Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0016Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0072Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL169Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccaL217Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0590Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL505Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0695Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL610Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0861Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0913Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL1133Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL007Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carccaL010Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR087Pisum sativum Cameor genome v1aPisum sativum
ccapsR088Pisum sativum Cameor genome v1aPisum sativum
ccapsR110Pisum sativum Cameor genome v1aPisum sativum
ccavrvR074Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccapvR094Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavrvR095Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR072Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavrvR112Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccapvR108Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavrvR119Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR096Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR125Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR100Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR150Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavssR078Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR088Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR119Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR122Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR127Vicia sativa cv. Studenica genome v1.0Vicia sativa
carccaL546Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carccaL548Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carccaL549Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavuR080Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR085Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR095Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR101Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR102Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR099Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR124Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR107Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavuR108Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccccaL0372Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL0519Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL0523Cajanus cajan Asha genome v1.0Cajanus cajan
ccavunR073Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR091Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR110Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccavunR094Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR122Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccavunR103Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccavunR104Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR148Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR149Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr05.1001138Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigun05g274100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vum_07G00265.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun05g274100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Phvul.005G158100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_022781456.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Va05G053150.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_013797Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_23409drCajCajn.Asha.2.0.Cc_v2.0_23409Cajanus cajangene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_23409.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_23409.1.exon1Cajanus cajanexon
Cc_v2.0_23409.1.exon2drCajCajn.Asha.2.0.Cc_v2.0_23409.1.exon2Cajanus cajanexon
Cc_v2.0_23409.1.exon3drCajCajn.Asha.2.0.Cc_v2.0_23409.1.exon3Cajanus cajanexon
Cc_v2.0_23409.1.exon4drCajCajn.Asha.2.0.Cc_v2.0_23409.1.exon4Cajanus cajanexon
Cc_v2.0_23409.1.exon5drCajCajn.Asha.2.0.Cc_v2.0_23409.1.exon5Cajanus cajanexon
Cc_v2.0_23409.1.exon6drCajCajn.Asha.2.0.Cc_v2.0_23409.1.exon6Cajanus cajanexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_23409.1.utr5p1drCajCajn.Asha.2.0.Cc_v2.0_23409.1.utr5p1Cajanus cajanfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_23409.1drCajCajn.Asha.2.0.cds.Cc_v2.0_23409.1Cajanus cajanCDS
cds.Cc_v2.0_23409.1drCajCajn.Asha.2.0.cds.Cc_v2.0_23409.1_2Cajanus cajanCDS
cds.Cc_v2.0_23409.1drCajCajn.Asha.2.0.cds.Cc_v2.0_23409.1_3Cajanus cajanCDS
cds.Cc_v2.0_23409.1drCajCajn.Asha.2.0.cds.Cc_v2.0_23409.1_4Cajanus cajanCDS
cds.Cc_v2.0_23409.1drCajCajn.Asha.2.0.cds.Cc_v2.0_23409.1_5Cajanus cajanCDS
cds.Cc_v2.0_23409.1drCajCajn.Asha.2.0.cds.Cc_v2.0_23409.1_6Cajanus cajanCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_23409.1.utr3p1drCajCajn.Asha.2.0.Cc_v2.0_23409.1.utr3p1Cajanus cajanthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_23409.1drCajCajn.Asha.2.0.Cc_v2.0_23409.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_23409.1drCajCajn.Asha.2.0.Cc_v2.0_23409.1-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151SUD9|A0A151SUD9_CAJCA (RNA-binding protein C660.15 family OS=Cajanus cajan OX=3821 GN=KK1_013797 PE=4 SV=1)

HSP 1 Score: 715.301 bits (1845), Expect = 0.000e+0
Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0 
Query:    1 MDNYYLSQHSQFESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQYSDSGMNGAYNHFEGSFNGNAATVYGGYCGYGYGFGYGGPMYCFGGYGVNSYGNPMGYGGIASYGDGNAYGRTGNFNRTGGYDSGKVAEKDDGPTSGRYHPYWK 353
            MDNYYLSQHSQFESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQYSDSGMNGAYNHFEGSFNGNAATVYGGYCGYGYGFGYGGPMYCFGGYGVNSYGNPMGYGGIASYGDGNAYGRTGNFNRTGGYDSGKVAEKDDGPTSGRYHPYWK
Sbjct:    1 MDNYYLSQHSQFESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQYSDSGMNGAYNHFEGSFNGNAATVYGGYCGYGYGFGYGGPMYCFGGYGVNSYGNPMGYGGIASYGDGNAYGRTGNFNRTGGYDSGKVAEKDDGPTSGRYHPYWK 353
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SEB5|A0AA86SEB5_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS16129 PE=4 SV=1)

HSP 1 Score: 576.244 bits (1484), Expect = 0.000e+0
Identity = 306/354 (86.44%), Postives = 324/354 (91.53%), Query Frame = 0 
Query:    1 MDNYYLSQHSQFESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQYSDSGMNGAYNHFEGSFNGNAATVYGGYCGYGYGFGYGGPMYCFGGYGVNSYGNPMG-YGGIASYGDGNAYGRTGNFNRTGGYDSGKVAEKDDGPTSGRYHPYWK 353
            MD Y   QHSQFE+E  AY+     +H KPS NRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEV GVLKTKKIFVGGIPQ F DD+L+ YFSPYGDVI+CQIMLDHN+GRSRGFGFVTFD+EDS++KVFS GKIHEIGGKQVEIKRAEPKRS VD+ S T+RKSYGGFGNGMDGYGGNSSRNRNHGKRGGQY+DSGMNGAY HFEGSF G+AATVYGGYCGYGYGFGYGGPMYC+GGYG+NSYGNP G YGGI SYGDGNAYGR G+FNRT GYD GK AEKDDGPT+GRYHPYWK
Sbjct:    1 MDCYPSQQHSQFEAEPGAYDGYAIDEHVKPSSNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVFGVLKTKKIFVGGIPQLFTDDELRGYFSPYGDVIECQIMLDHNTGRSRGFGFVTFDDEDSIEKVFSAGKIHEIGGKQVEIKRAEPKRSGVDHIS-TTRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQYTDSGMNGAYGHFEGSFGGSAATVYGGYCGYGYGFGYGGPMYCYGGYGLNSYGNPPGSYGGIPSYGDGNAYGRNGSFNRTSGYDGGKGAEKDDGPTTGRYHPYWK 353
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445IF57|A0A445IF57_GLYSO (Heterogeneous nuclear ribonucleoprotein 1 OS=Glycine soja OX=3848 GN=D0Y65_032684 PE=4 SV=1)

HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0
Identity = 305/354 (86.16%), Postives = 325/354 (91.81%), Query Frame = 0 
Query:    1 MDNYYLSQHSQFESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQYSDSGMNGAYNHFEGSFNGNAATVYGGYCGYGYGFGYGGPMYCFGGYGVNSYGNPMGYG-GIASYGDGNAYGRTGNFNRTGGYDSGKVAEKDDGPTSGRYHPYWK 353
            MD YY+SQHSQ ESE DAYN DVN +H KPSFNRRDS SGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFA+SAVADEVLAQEHTID RVVEVKRTVPRED++V GV KTKKIFVGGI QFF DD+L+EYFSPYG+VI+CQIMLDHN+GRSRGFGFVTFD+EDSV+KVFSVGKIHEIGGKQVEIKRAEPKRS VD   NTSRKSYGGFGN MDG+GGNSSRNRNHGKRGGQY+ SGMNGAY HF+GSF G+AATVYGGYCGYGY FGYGGPMYCFGGYG+NSYGNP GYG GI SYGD NAYGR G+FN +GGYDS KVAEK DGPT+GRYHPYWK
Sbjct:    1 MDYYYVSQHSQLESEADAYNVDVNDEHVKPSFNRRDSFSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFANSAVADEVLAQEHTIDHRVVEVKRTVPREDVDVTGVFKTKKIFVGGIAQFFTDDELREYFSPYGNVIECQIMLDHNTGRSRGFGFVTFDDEDSVEKVFSVGKIHEIGGKQVEIKRAEPKRSGVD-YCNTSRKSYGGFGNEMDGHGGNSSRNRNHGKRGGQYTGSGMNGAYGHFDGSFGGSAATVYGGYCGYGYEFGYGGPMYCFGGYGLNSYGNPGGYGSGITSYGDVNAYGRAGSFNGSGGYDSSKVAEKGDGPTTGRYHPYWK 353
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1M5B0|I1M5B0_SOYBN (RRM domain-containing protein OS=Glycine max OX=3847 GN=100818080 PE=4 SV=2)

HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0
Identity = 305/354 (86.16%), Postives = 325/354 (91.81%), Query Frame = 0 
Query:    1 MDNYYLSQHSQFESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQYSDSGMNGAYNHFEGSFNGNAATVYGGYCGYGYGFGYGGPMYCFGGYGVNSYGNPMGYG-GIASYGDGNAYGRTGNFNRTGGYDSGKVAEKDDGPTSGRYHPYWK 353
            MD YY+SQHSQ ESE DAYN DVN +H KPSFNRRDS SGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFA+SAVADEVLAQEHTID RVVEVKRTVPRED++V GV KTKKIFVGGI QFF DD+L+EYFSPYG+VI+CQIMLDHN+GRSRGFGFVTFD+EDSV+KVFSVGKIHEIGGKQVEIKRAEPKRS VD   NTSRKSYGGFGN MDG+GGNSSRNRNHGKRGGQY+ SGMNGAY HF+GSF G+AATVYGGYCGYGY FGYGGPMYCFGGYG+NSYGNP GYG GI SYGD NAYGR G+FN +GGYDS KVAEK DGPT+GRYHPYWK
Sbjct:    1 MDYYYVSQHSQLESEADAYNVDVNDEHVKPSFNRRDSFSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFANSAVADEVLAQEHTIDHRVVEVKRTVPREDVDVTGVFKTKKIFVGGIAQFFTDDELREYFSPYGNVIECQIMLDHNTGRSRGFGFVTFDDEDSVEKVFSVGKIHEIGGKQVEIKRAEPKRSGVD-YCNTSRKSYGGFGNEMDGHGGNSSRNRNHGKRGGQYTGSGMNGAYGHFDGSFGGSAATVYGGYCGYGYEFGYGGPMYCFGGYGLNSYGNPGGYGSGITSYGDVNAYGRAGSFNGSGGYDSSKVAEKGDGPTTGRYHPYWK 353
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371FQK7|A0A371FQK7_MUCPR (Heterogeneous nuclear ribonucleoprotein 1 (Fragment) OS=Mucuna pruriens OX=157652 GN=RNP1 PE=4 SV=1)

HSP 1 Score: 572.392 bits (1474), Expect = 0.000e+0
Identity = 306/346 (88.44%), Postives = 322/346 (93.06%), Query Frame = 0 
Query:    3 NYYLSQHSQFESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQYSDSGMNGAYNHFEGSFNGNAATVYGGYCGYGYGFGYGGPMYCFGGYGVNSYGNPMGYGGIASYGDGNAYGRTGNFNRTGGYDSGKVA-EKDDGPTSGR 347
            ++Y+SQ SQ ES+  AYN D   DH+KPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADS VADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFF DD+L+EYFS YGDVI+CQIMLDH +GRSRGFGFVTFDNEDSVD VF+VGKIHEIGGKQVEIKRAEPKRS VD SS TSRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQY+DSGMNGAY+HFEGSF G+AAT YGGYCGYGYG+GYGGPMYCFGGYGVNSYGNP  YG   SYGDGNAYGRTG+FNRTGGYDSGKVA EKDDGPT+GR
Sbjct:    2 DFYVSQPSQLESDAHAYNLD---DHSKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSVVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFTDDELREYFSSYGDVIECQIMLDHKTGRSRGFGFVTFDNEDSVDNVFAVGKIHEIGGKQVEIKRAEPKRSGVDYSS-TSRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQYTDSGMNGAYSHFEGSFGGSAATAYGGYCGYGYGYGYGGPMYCFGGYGVNSYGNPGAYGSTTSYGDGNAYGRTGSFNRTGGYDSGKVADEKDDGPTNGR 343
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SFY4|A0A0S3SFY4_PHAAN (RRM domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G033700 PE=4 SV=1)

HSP 1 Score: 565.074 bits (1455), Expect = 0.000e+0
Identity = 302/352 (85.80%), Postives = 322/352 (91.48%), Query Frame = 0 
Query:    4 YYLSQHS-QFESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQYSDSGMNGAYNHFEGSFNGNAATVYGGYCGYGYGFGYGGPMYCFGGYGVNSYGNPMGY-GGIASYGDGNAYGRTGNFNRTGGYDSGKVAEKDDGPTSGRYHPYWK 353
            Y+ SQH+ QFESE  AYN D N + AKPS N RDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDME IGVLKTKKIFVGGIPQ F DD+L+ YFSPYGDV++CQIMLDHN+GRSRGFGFVTFDNEDSV+KVFS GKIHEIGGKQVEIKRAEPKRS VD+ S+TSRKSYGGF NGMDGYGGNSSRNRNHGKRGGQY+DSGMNGAY +FEGSF G+AATVYGGYCGYGYGFGYGGPMYC+GGYG+NSYGNP  Y GG  S+GDGNAYGR  +FNR+ GYD GK AEKDDGPT+GRYHPYWK
Sbjct:    3 YFPSQHALQFESEPGAYNGDANDELAKPSPNPRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEGIGVLKTKKIFVGGIPQLFTDDELRGYFSPYGDVVECQIMLDHNTGRSRGFGFVTFDNEDSVEKVFSAGKIHEIGGKQVEIKRAEPKRSGVDHISSTSRKSYGGFSNGMDGYGGNSSRNRNHGKRGGQYTDSGMNGAYGYFEGSFGGSAATVYGGYCGYGYGFGYGGPMYCYGGYGLNSYGNPGVYGGGTISHGDGNAYGRNVSFNRSSGYDGGKGAEKDDGPTTGRYHPYWK 354
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UP86|A0A0L9UP86_PHAAN (Heterogeneous nuclear ribonucleoprotein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0213520 PE=4 SV=1)

HSP 1 Score: 565.074 bits (1455), Expect = 0.000e+0
Identity = 302/352 (85.80%), Postives = 322/352 (91.48%), Query Frame = 0 
Query:    4 YYLSQHS-QFESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQYSDSGMNGAYNHFEGSFNGNAATVYGGYCGYGYGFGYGGPMYCFGGYGVNSYGNPMGY-GGIASYGDGNAYGRTGNFNRTGGYDSGKVAEKDDGPTSGRYHPYWK 353
            Y+ SQH+ QFESE  AYN D N + AKPS N RDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDME IGVLKTKKIFVGGIPQ F DD+L+ YFSPYGDV++CQIMLDHN+GRSRGFGFVTFDNEDSV+KVFS GKIHEIGGKQVEIKRAEPKRS VD+ S+TSRKSYGGF NGMDGYGGNSSRNRNHGKRGGQY+DSGMNGAY +FEGSF G+AATVYGGYCGYGYGFGYGGPMYC+GGYG+NSYGNP  Y GG  S+GDGNAYGR  +FNR+ GYD GK AEKDDGPT+GRYHPYWK
Sbjct:    3 YFPSQHALQFESEPGAYNGDANDELAKPSPNPRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEGIGVLKTKKIFVGGIPQLFTDDELRGYFSPYGDVVECQIMLDHNTGRSRGFGFVTFDNEDSVEKVFSAGKIHEIGGKQVEIKRAEPKRSGVDHISSTSRKSYGGFSNGMDGYGGNSSRNRNHGKRGGQYTDSGMNGAYGYFEGSFGGSAATVYGGYCGYGYGFGYGGPMYCYGGYGLNSYGNPGVYGGGTISHGDGNAYGRNVSFNRSSGYDGGKGAEKDDGPTTGRYHPYWK 354
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6NAU0|A0A4D6NAU0_VIGUN (Heterogeneous nuclear ribonucleoprotein A1/A3 OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g286 PE=4 SV=1)

HSP 1 Score: 560.451 bits (1443), Expect = 0.000e+0
Identity = 303/352 (86.08%), Postives = 318/352 (90.34%), Query Frame = 0 
Query:    4 YYLSQHS-QFESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQYSDSGMNGAYNHFEGSFNGNAATVYGGYCGYGYGFGYGGPMYCFGGYGVNSYGNPMGY-GGIASYGDGNAYGRTGNFNRTGGYDSGKVAEKDDGPTSGRYHPYWK 353
            YY SQH  QFESE  AY+ D N + AKPS N RDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLA EHTIDGRVVEVKRTVPREDME IGVLKTKKIFVGGIPQ F DD+L+ YFSPYGDV+DCQIMLDHN+GRSRGFGFVTFDNEDSV+KVFS GKIHEIGGKQVEIKRAEPKRS VD+ S TSRKSYGGF NGMDGYGGNSSRNRNHGKRGGQY+D GMNGAY +FEGSF G+AATVYGGYCGYGYGFGYGGPMYC+GGYG+NSYGNP  Y GG  S+GDGNAYGR GNFNR  GYD GK AEKDDGPT+GRYHPYWK
Sbjct:    3 YYPSQHGLQFESEPGAYHGDANDELAKPSPNPRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAHEHTIDGRVVEVKRTVPREDMEGIGVLKTKKIFVGGIPQLFTDDELRVYFSPYGDVVDCQIMLDHNTGRSRGFGFVTFDNEDSVEKVFSAGKIHEIGGKQVEIKRAEPKRSGVDHIS-TSRKSYGGFSNGMDGYGGNSSRNRNHGKRGGQYTDPGMNGAYGYFEGSFGGSAATVYGGYCGYGYGFGYGGPMYCYGGYGLNSYGNPGVYGGGTISHGDGNAYGRNGNFNRNSGYDGGKGAEKDDGPTTGRYHPYWK 353
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7C0S6|V7C0S6_PHAVU (RRM domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G158100g PE=4 SV=1)

HSP 1 Score: 548.895 bits (1413), Expect = 0.000e+0
Identity = 297/354 (83.90%), Postives = 317/354 (89.55%), Query Frame = 0 
Query:    1 MDNYYLSQHSQFESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQYSDSGMNGAYNHFEGSFNGNAATVYGGYCGYGYGFGYGGPMYCFGGYGVNSYGNPMGYGGIA-SYGDGNAYGRTGNFNRTGGYDSGKVAEKDDGPTSGRYHPYWK 353
            MD Y    H QFESE   Y+ D N +  KPS N RD SSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDME IGVL TKKIFVGGIPQ F+DD+L+ YF PYG+VI+CQIM+DHN+GRSRGFGFVTFDNEDSV+KVFSVGKIHEIGGKQVEIKRAEPKRS VD+SS TSRKSYGGFGN MDGYGGNSSRNRNHGKRGG Y+DSGMNGAY +FEGSF G+AATVYGGYCGYGYGFGYGGPMYC+GGYG+NS+GNP  YGG A  + DGNAYGR G+FNRT GYDSGK AEKDDGPT+GRYHPYWK
Sbjct:    1 MDYYPSQHHLQFESEPGVYHGDFNDELVKPSSNPRDPSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEGIGVLTTKKIFVGGIPQLFSDDELRGYFLPYGNVIECQIMVDHNTGRSRGFGFVTFDNEDSVEKVFSVGKIHEIGGKQVEIKRAEPKRSGVDHSS-TSRKSYGGFGNEMDGYGGNSSRNRNHGKRGGHYTDSGMNGAYGYFEGSFGGSAATVYGGYCGYGYGFGYGGPMYCYGGYGLNSFGNPGVYGGGAIPHVDGNAYGRNGSFNRTSGYDSGKGAEKDDGPTTGRYHPYWK 353
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0F437|A0A3Q0F437_VIGRR (Heterogeneous nuclear ribonucleoprotein 1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106762095 PE=4 SV=1)

HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0
Identity = 301/374 (80.48%), Postives = 321/374 (85.83%), Query Frame = 0 
Query:    4 YYLSQHS-QFESETDAYNADVNGDHAKPSFNRRDSSSG----------------------KLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQYSDSGMNGAYNHFEGSFNGNAATVYGGYCGYGYGFGYGGPMYCFGGYGVNSYGNPMGY-GGIASYGDGNAYGRTGNFNRTGGYDSGKVAEKDDGPTSGRYHPYWK 353
            ++ SQH  QFESE  AY+ D N + AKPS N RDSSSG                      KLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDME IGVLKTKKIFVGGIPQ F DD+L+ YFSPYGDV++CQIMLDHN+GRSRGFGFVTFDNEDSV+KVFS GKIHEIGGKQVEIKRAEPKRS VD+SS TSRKSYGGF NGMDGYGGNSSRNRNH KRGGQY+DSGMNGAY +FEGSF G+AATVYGGYCGYGYGFGYGGPMYC+GGYG+NSYGNP  Y GG  S+GDGNAYGR G+FNR+ GYD GK AEKDDGPT+GRYHPYWK
Sbjct:    3 HFPSQHGLQFESEPGAYHGDANDELAKPSPNPRDSSSGLVTSVVGGGTWVLWRKGFCSVRKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEGIGVLKTKKIFVGGIPQLFTDDELRGYFSPYGDVVECQIMLDHNTGRSRGFGFVTFDNEDSVEKVFSAGKIHEIGGKQVEIKRAEPKRSGVDHSS-TSRKSYGGFSNGMDGYGGNSSRNRNHAKRGGQYTDSGMNGAYGYFEGSFGGSAATVYGGYCGYGYGFGYGGPMYCYGGYGLNSYGNPGVYGGGTISHGDGNAYGRNGSFNRSSGYDGGKGAEKDDGPTTGRYHPYWK 375
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O94432|YHKF_SCHPO (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC660.15 PE=4 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.776e-51
Identity = 96/235 (40.85%), Postives = 145/235 (61.70%), Query Frame = 0 
Query:    2 DNYYLSQHSQFESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGNGMDGYGGN 236
            DNY  +Q +   S     N D N +   P FNR D   GK+F+GG++WET+ +S  +YF ++GEV D  +M +  +GR RGFGF+TF +    +EV+++EH +DG++++ KR +PRE+ E     KT K+FVGG+P    +++ + +F+ +G V+D  +M+D ++GR RGFGFVT++NE +V+   S   I  I GK VE+KRA PK S  D+     R  +G  GN    Y  N
Sbjct:  130 DNYNENQSALTGSGAMESNED-NAEETSP-FNRED---GKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKEHHLDGKIIDPKRAIPREEQE-----KTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYI-TIHGKPVEVKRATPKASLRDSH---DRHQHGYHGNANPYYAQN 350
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q920Q6|MSI2H_MOUSE (RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.185e-47
Identity = 83/179 (46.37%), Postives = 115/179 (64.25%), Query Frame = 0 
Query:   31 SFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQE-HTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPK 208
            S N      GK+F+GG+SW+TS +S  +YFSK+GE+ + ++M +  + R RGFGFVTFAD A  D+VL Q  H +D + ++ K   PR     + V +TKKIFVGG+      +D+K+YF  +G V D  +M D  + R RGFGFVTF+NED V+KV  +   HEI  K VE K+A+PK
Sbjct:   12 SANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKM-VTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEI-HFHEINNKMVECKKAQPK 188

HSP 2 Score: 77.0258 bits (188), Expect = 2.007e-14
Identity = 38/97 (39.18%), Postives = 58/97 (59.79%), Query Frame = 0 
Query:  130 KIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGF 226
            K+F+GG+    + D L++YFS +G++ +C +M D  + RSRGFGFVTF +  SVDKV      HE+  K ++ K A P+R+     + T +   GG 
Sbjct:   22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPH-HELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGL 117

HSP 3 Score: 70.8626 bits (172), Expect = 1.969e-12
Identity = 38/111 (34.23%), Postives = 62/111 (55.86%), Query Frame = 0 
Query:   11 QFESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQE-HTIDGRVVEVKRTVPREDM 120
            Q   E D+   D      + +  +  + + K+FVGG+S  T  E    YF ++G+V D+++M +K + R RGFGFVTF +  V ++V     H I+ ++VE K+  P+E M
Sbjct:   81 QPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVM 191
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q96DH6|MSI2H_HUMAN (RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.417e-47
Identity = 83/179 (46.37%), Postives = 115/179 (64.25%), Query Frame = 0 
Query:   31 SFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQE-HTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPK 208
            S N      GK+F+GG+SW+TS +S  +YFSK+GE+ + ++M +  + R RGFGFVTFAD A  D+VL Q  H +D + ++ K   PR     + V +TKKIFVGG+      +D+K+YF  +G V D  +M D  + R RGFGFVTF+NED V+KV  +   HEI  K VE K+A+PK
Sbjct:   12 SANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKM-VTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEI-HFHEINNKMVECKKAQPK 188

HSP 2 Score: 76.6406 bits (187), Expect = 2.073e-14
Identity = 38/97 (39.18%), Postives = 58/97 (59.79%), Query Frame = 0 
Query:  130 KIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGF 226
            K+F+GG+    + D L++YFS +G++ +C +M D  + RSRGFGFVTF +  SVDKV      HE+  K ++ K A P+R+     + T +   GG 
Sbjct:   22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPH-HELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGL 117

HSP 3 Score: 70.8626 bits (172), Expect = 1.712e-12
Identity = 38/111 (34.23%), Postives = 62/111 (55.86%), Query Frame = 0 
Query:   11 QFESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQE-HTIDGRVVEVKRTVPREDM 120
            Q   E D+   D      + +  +  + + K+FVGG+S  T  E    YF ++G+V D+++M +K + R RGFGFVTF +  V ++V     H I+ ++VE K+  P+E M
Sbjct:   81 QPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVM 191
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O43347|MSI1H_HUMAN (RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=9606 GN=MSI1 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.814e-46
Identity = 93/223 (41.70%), Postives = 127/223 (56.95%), Query Frame = 0 
Query:   23 VNGDHAKPSFNRRDSS--SGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQ-EHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRK---SYG----GFGNGMDGYGG 235
            +  D  +P     DS     K+F+GG+SW+T+QE    YF ++GEV + ++M + L+ R RGFGFVTF D A  D+VLAQ  H +D + ++ K   PR     + V +TKKIFVGG+      +D+K+YF  +G V D  +M D  + R RGFGFVTF++ED V+KV  +   HEI  K VE K+A+PK       S   R     YG      G GM GY G
Sbjct:    1 METDAPQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKM-VTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI-HFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPG 221
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|G5EFS2|MSI1H_CAEEL (RNA-binding protein Musashi homolog 1 OS=Caenorhabditis elegans OX=6239 GN=msi-1 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.531e-46
Identity = 78/184 (42.39%), Postives = 118/184 (64.13%), Query Frame = 0 
Query:   40 GKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLA-QEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKS 222
            GK+F+GG+SW+T+ E+  +YF ++GEV + ++M +  + R RGFGF+TF D +  D+VL  +EH +DG+ ++ K   P+     + V KTKK+F+GG+      +D+K+YF  YG V D  +M D  + R RGFGFVTFD+++  DKV  +   HEI GK VE K+A+PK   +    N SR +
Sbjct:   45 GKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKL-VTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEI-HFHEINGKMVECKKAQPKEVMLPVQLNKSRAA 226

HSP 2 Score: 77.411 bits (189), Expect = 9.285e-15
Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 0 
Query:   13 ESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQE-HTIDGRVVEVKRTVPREDMEVIGVLKTK 129
            E E D    D      K +  +  + + K+F+GG+S  ++ E    YF  YG+V D+++M +K + R RGFGFVTF    VAD+V     H I+G++VE K+  P+E M  + + K++
Sbjct:  107 EHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKEVMLPVQLNKSR 224

HSP 3 Score: 76.6406 bits (187), Expect = 1.984e-14
Identity = 37/97 (38.14%), Postives = 61/97 (62.89%), Query Frame = 0 
Query:  130 KIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGF 226
            K+F+GG+      ++L++YF  +G+V +C +M D  + R+RGFGF+TF +  SVDKV +  + HE+ GK+++ K A PKR+     + T +   GG 
Sbjct:   46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLN-NREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGL 141
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8K3P4|MSI1H_RAT (RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus OX=10116 GN=Msi1 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.877e-46
Identity = 93/223 (41.70%), Postives = 126/223 (56.50%), Query Frame = 0 
Query:   23 VNGDHAKPSFNRRDSS--SGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQ-EHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRK---SYG----GFGNGMDGYGG 235
            +  D  +P     DS     K+F+GG+SW+T+QE    YF ++GEV + ++M + L+ R RGFGFVTF D A  D+VLAQ  H +D + ++ K   PR     + V +TKKIFVGG+      +D+K YF  +G V D  +M D  + R RGFGFVTF++ED V+KV  +   HEI  K VE K+A+PK       S   R     YG      G GM GY G
Sbjct:    1 METDAPQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKM-VTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI-HFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPG 221
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q61474|MSI1H_MOUSE (RNA-binding protein Musashi homolog 1 OS=Mus musculus OX=10090 GN=Msi1 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.087e-46
Identity = 93/223 (41.70%), Postives = 126/223 (56.50%), Query Frame = 0 
Query:   23 VNGDHAKPSFNRRDSS--SGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQ-EHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRK---SYG----GFGNGMDGYGG 235
            +  D  +P     DS     K+F+GG+SW+T+QE    YF ++GEV + ++M + L+ R RGFGFVTF D A  D+VLAQ  H +D + ++ K   PR     + V +TKKIFVGG+      +D+K YF  +G V D  +M D  + R RGFGFVTF++ED V+KV  +   HEI  K VE K+A+PK       S   R     YG      G GM GY G
Sbjct:    1 METDAPQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKM-VTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI-HFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPG 221
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P48809|RB27C_DROME (Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster OX=7227 GN=Hrb27C PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 1.063e-45
Identity = 102/265 (38.49%), Postives = 144/265 (54.34%), Query Frame = 0 
Query:   40 GKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQ-EHTIDGRVVEVKRTVPREDMEVIGVLKTK-----KIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRK--SYGGFGNGMDGYGGNSSRNRNHGKRGGQYSDSGMNGAYNHFEGSFNGNAATVYGGYCGYG-------YGFGYGGP 289
            GKLFVGG+SWET+QE+   YF ++G++ D V+M N  SGR RGFGFVTFAD    + VL    HT+DGR ++ K   PR       + K K     K+F+GG+P    + DL+ +F+ YG V +  IM D    +SRGFGF++F+ E SV+ V +   I+ + GKQVEIK+AEP+  +   +SN S    +YG  GN    +G + +       + GQ     +N             A  +  GY G+G       YG+G  GP
Sbjct:    7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRT------LQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYIN-LNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPLNMPI---------GAPNMMPGYQGWGTSPQQQQYGYGNSGP 255
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q99383|HRP1_YEAST (Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HRP1 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.392e-45
Identity = 77/170 (45.29%), Postives = 119/170 (70.00%), Query Frame = 0 
Query:   39 SGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPK 208
            S K+F+GG++W+T++++   YF KYG VTD  IM +  +GR RGFGF++F   +  DEV+  +H +DG+V++ KR +PR++ +     KT KIFVGGI       + +E+FS +G +ID Q+MLD ++G+SRGFGFVT+D+ D+VD+V    K  +   +++EIKRAEP+
Sbjct:  158 SCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQD-----KTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQ-NKFIDFKDRKIEIKRAEPR 321
[Close]
BLAST of Cc_v2.0_23409.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9VVE5|MSIR6_DROME (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=Rbp6 PE=2 SV=3)

HSP 1 Score: 162.54 bits (410), Expect = 1.737e-45
Identity = 85/197 (43.15%), Postives = 121/197 (61.42%), Query Frame = 0 
Query:   40 GKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQ-EHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVD-NSSNTSRKSYGGFGNGMDGYG 234
            GK+F+GG+SW+TS ES  +YF +YG+++++++M +  + R RGFGFVTF+D    D+VL Q  H +DG+ V+ K   PR     + V +TKKIFVGG+      +D+K YF  +G + D  +M D  + R RGFGFVTF +ED VDKV  +   HEI  K VE K+A+PK   +  N + T       + N M G G
Sbjct:   29 GKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKM-VTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEI-HFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSAYDNIMWGLG 223

HSP 2 Score: 73.9442 bits (180), Expect = 2.176e-13
Identity = 41/116 (35.34%), Postives = 67/116 (57.76%), Query Frame = 0 
Query:   22 DVNGDHAKP--SFNRRD-----SSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQE-HTIDGRVVEVKRTVPREDMEVIGVLKTK 129
            +++G    P  +F RR      + + K+FVGG+S  T+ E   +YF ++G + D+++M +K + R RGFGFVTF    V D+V     H I+ ++VE K+  P+E M    + KT+
Sbjct:   93 ELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTR 208
[Close]
BLAST of Cc_v2.0_23409.1 vs. Araport11
Match: | (Symbols: RBGD1 | RNA-binding glycine-rich protein D1 | chr1:6067394-6069098 REVERSE LENGTH=369)

HSP 1 Score: 253.447 bits (646), Expect = 1.479e-81
Identity = 138/247 (55.87%), Postives = 175/247 (70.85%), Query Frame = 0 
Query:    9 HSQFESET--DAYN----ADVNGDHAKPSFNRR-----DSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPR--EDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFG--NGMDGYGGNSSRN 240
             S FE ET  D  N     D  G   K S + R      SS GKLFVGG+SWET+ E+F NYF K+GEV DSVIMT++++G PRGFGFVTFADSAVA++VL ++H ID R V++KRT+PR  +D ++  V KT+KIFVGG+P    +D+LK YF  YGD+I+ QIM DH++GRSRGFGFVTF  EDSVD++FS GK+HE+G KQVEIKRAEPKR+  DNS     +SYG  G  +  D Y G ++ +
Sbjct:   24 QSDFEVETFDDRRNGGAAVDTGGIQMKHSVDHRHSSSSMSSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGRDNSF----RSYGASGKYDQEDSYSGKANED 266
[Close]
BLAST of Cc_v2.0_23409.1 vs. Araport11
Match: | (Symbols: RBGD1 | RNA-binding glycine-rich protein D1 | chr1:6067394-6069098 REVERSE LENGTH=369)

HSP 1 Score: 253.447 bits (646), Expect = 1.479e-81
Identity = 138/247 (55.87%), Postives = 175/247 (70.85%), Query Frame = 0 
Query:    9 HSQFESET--DAYN----ADVNGDHAKPSFNRR-----DSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPR--EDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFG--NGMDGYGGNSSRN 240
             S FE ET  D  N     D  G   K S + R      SS GKLFVGG+SWET+ E+F NYF K+GEV DSVIMT++++G PRGFGFVTFADSAVA++VL ++H ID R V++KRT+PR  +D ++  V KT+KIFVGG+P    +D+LK YF  YGD+I+ QIM DH++GRSRGFGFVTF  EDSVD++FS GK+HE+G KQVEIKRAEPKR+  DNS     +SYG  G  +  D Y G ++ +
Sbjct:   24 QSDFEVETFDDRRNGGAAVDTGGIQMKHSVDHRHSSSSMSSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGRDNSF----RSYGASGKYDQEDSYSGKANED 266
[Close]
BLAST of Cc_v2.0_23409.1 vs. Araport11
Match: | (Symbols: RBGD1 | RNA-binding glycine-rich protein D1 | chr1:6067394-6069098 REVERSE LENGTH=369)

HSP 1 Score: 253.447 bits (646), Expect = 1.479e-81
Identity = 138/247 (55.87%), Postives = 175/247 (70.85%), Query Frame = 0 
Query:    9 HSQFESET--DAYN----ADVNGDHAKPSFNRR-----DSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPR--EDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFG--NGMDGYGGNSSRN 240
             S FE ET  D  N     D  G   K S + R      SS GKLFVGG+SWET+ E+F NYF K+GEV DSVIMT++++G PRGFGFVTFADSAVA++VL ++H ID R V++KRT+PR  +D ++  V KT+KIFVGG+P    +D+LK YF  YGD+I+ QIM DH++GRSRGFGFVTF  EDSVD++FS GK+HE+G KQVEIKRAEPKR+  DNS     +SYG  G  +  D Y G ++ +
Sbjct:   24 QSDFEVETFDDRRNGGAAVDTGGIQMKHSVDHRHSSSSMSSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGRDNSF----RSYGASGKYDQEDSYSGKANED 266
[Close]
BLAST of Cc_v2.0_23409.1 vs. Araport11
Match: | (Symbols: HLP1, RBGD5 | RNA-binding glycine-rich protein D5 | chr5:16225483-16227423 FORWARD LENGTH=423)

HSP 1 Score: 199.904 bits (507), Expect = 3.215e-60
Identity = 100/187 (53.48%), Postives = 135/187 (72.19%), Query Frame = 0 
Query:   38 SSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYG 224
            S+GK+FVGG++ ET+   F  +F KYGE+TDSVIM ++ +G+PRGFGFVT+ADS+V D+V+   H I G+ VE+KRT+PR  M      KTKKIFVGGIP    DD+ KE+F  +G++ + QIM DH++GRSRGFGFVT+++ED VD + + G   E+ G QVEIK+AEPK+    NS  T  K +G
Sbjct:   40 SAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQDNHIIIGKQVEIKRTIPRGSMSS-NDFKTKKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKKP---NSVTTPSKRFG 222
[Close]
BLAST of Cc_v2.0_23409.1 vs. Araport11
Match: | (Symbols: RBGD3 | RNA-binding glycine-rich protein D3 | chr3:4254848-4256621 FORWARD LENGTH=358)

HSP 1 Score: 192.586 bits (488), Expect = 4.614e-58
Identity = 95/200 (47.50%), Postives = 138/200 (69.00%), Query Frame = 0 
Query:   37 SSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPR-------EDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGNG 229
            +S GK+F+GG+  +T+   F  +F KYGE+TDSVIM ++ +G+PRGFGF+TFAD +V D+V+   H I+G+ VE+KRT+P+       +D      +KTKKIFVGGIP    +D+LK++F+ YG+V++ Q++ DH + RSRGFGFV FD+E+ VD++ S G + ++   QVEIK+AEPK+S      N S  SYG    G
Sbjct:   16 ASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKD------IKTKKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKAEPKKSL-----NRSPPSYGSHPRG 204

HSP 2 Score: 64.3142 bits (155), Expect = 3.258e-11
Identity = 30/88 (34.09%), Postives = 53/88 (60.23%), Query Frame = 0 
Query:   35 RDSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTID--GRVVEVKRTVPREDM 120
            +D  + K+FVGGI    +++   ++F+KYG V +  ++ +  + R RGFGFV F    V DE+L++ + ID     VE+K+  P++ +
Sbjct:  104 KDIKTKKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKAEPKKSL 191
[Close]
BLAST of Cc_v2.0_23409.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:13445552-13447592 FORWARD LENGTH=455)

HSP 1 Score: 192.586 bits (488), Expect = 3.782e-57
Identity = 97/219 (44.29%), Postives = 136/219 (62.10%), Query Frame = 0 
Query:   30 PSFNRRDSSS--GKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVI------------------GVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGN 228
            P   + +S+S  GKLF+GGISW+T +E    YF KYG++ ++VIM ++ +GR RGFGF+ FAD +VA+ V+  +H IDGR VE K+ VPR+D +V+                  G  +TKKIFVGG+P    + + K YF  +G + D  +M DHN+ R RGFGF+TFD+E+SVD V      HE+ GK VE+KRA PK  +   S+  +R    G+GN
Sbjct:    3 PEEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLH-KTFHELNGKMVEVKRAVPKELS---STTPNRSPLIGYGN 217
[Close]
BLAST of Cc_v2.0_23409.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:13445265-13447592 FORWARD LENGTH=452)

HSP 1 Score: 192.586 bits (488), Expect = 4.756e-57
Identity = 95/210 (45.24%), Postives = 131/210 (62.38%), Query Frame = 0 
Query:   37 SSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVI------------------GVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKRSAVDNSSNTSRKSYGGFGN 228
            S  GKLF+GGISW+T +E    YF KYG++ ++VIM ++ +GR RGFGF+ FAD +VA+ V+  +H IDGR VE K+ VPR+D +V+                  G  +TKKIFVGG+P    + + K YF  +G + D  +M DHN+ R RGFGF+TFD+E+SVD V      HE+ GK VE+KRA PK  +   S+  +R    G+GN
Sbjct:    9 SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLH-KTFHELNGKMVEVKRAVPKELS---STTPNRSPLIGYGN 214
[Close]
BLAST of Cc_v2.0_23409.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:22502077-22503658 REVERSE LENGTH=448)

HSP 1 Score: 192.2 bits (487), Expect = 5.846e-57
Identity = 99/213 (46.48%), Postives = 136/213 (63.85%), Query Frame = 0 
Query:   36 DSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVI---------------GVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKR-SAVDN--SSNTSRKSYGGFGNGM 230
            +S  GKLF+GGISW+T +E   +YFS YG+V ++VIM ++ +GR RGFGF+ FAD  V++ V+  +H IDGR VE K+ VPR+D +V+               G  +TKKIFVGG+P    +++ K YF  +G + D  +M DHN+ R RGFGF+TFD++D+VD+V      HE+ GK VE+KRA PK  S V N  S   S  +YGG  N M
Sbjct:    2 ESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLH-KTFHELNGKLVEVKRAVPKEISPVSNIRSPLASGVNYGGGSNRM 213
[Close]
BLAST of Cc_v2.0_23409.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:22502077-22503658 REVERSE LENGTH=448)

HSP 1 Score: 192.2 bits (487), Expect = 5.846e-57
Identity = 99/213 (46.48%), Postives = 136/213 (63.85%), Query Frame = 0 
Query:   36 DSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVI---------------GVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKR-SAVDN--SSNTSRKSYGGFGNGM 230
            +S  GKLF+GGISW+T +E   +YFS YG+V ++VIM ++ +GR RGFGF+ FAD  V++ V+  +H IDGR VE K+ VPR+D +V+               G  +TKKIFVGG+P    +++ K YF  +G + D  +M DHN+ R RGFGF+TFD++D+VD+V      HE+ GK VE+KRA PK  S V N  S   S  +YGG  N M
Sbjct:    2 ESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLH-KTFHELNGKLVEVKRAVPKEISPVSNIRSPLASGVNYGGGSNRM 213
[Close]
BLAST of Cc_v2.0_23409.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:22502077-22503658 REVERSE LENGTH=448)

HSP 1 Score: 192.2 bits (487), Expect = 5.846e-57
Identity = 99/213 (46.48%), Postives = 136/213 (63.85%), Query Frame = 0 
Query:   36 DSSSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQEHTIDGRVVEVKRTVPREDMEVI---------------GVLKTKKIFVGGIPQFFADDDLKEYFSPYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQVEIKRAEPKR-SAVDN--SSNTSRKSYGGFGNGM 230
            +S  GKLF+GGISW+T +E   +YFS YG+V ++VIM ++ +GR RGFGF+ FAD  V++ V+  +H IDGR VE K+ VPR+D +V+               G  +TKKIFVGG+P    +++ K YF  +G + D  +M DHN+ R RGFGF+TFD++D+VD+V      HE+ GK VE+KRA PK  S V N  S   S  +YGG  N M
Sbjct:    2 ESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLH-KTFHELNGKLVEVKRAVPKEISPVSNIRSPLASGVNYGGGSNRM 213
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_23409.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151SUD9|A0A151SUD9_CAJCA0.000e+0100.00RNA-binding protein C660.15 family OS=Cajanus caja... [more]
tr|A0AA86SEB5|A0AA86SEB5_9FABA0.000e+086.44Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A445IF57|A0A445IF57_GLYSO0.000e+086.16Heterogeneous nuclear ribonucleoprotein 1 OS=Glyci... [more]
tr|I1M5B0|I1M5B0_SOYBN0.000e+086.16RRM domain-containing protein OS=Glycine max OX=38... [more]
tr|A0A371FQK7|A0A371FQK7_MUCPR0.000e+088.44Heterogeneous nuclear ribonucleoprotein 1 (Fragmen... [more]
tr|A0A0S3SFY4|A0A0S3SFY4_PHAAN0.000e+085.80RRM domain-containing protein OS=Vigna angularis v... [more]
tr|A0A0L9UP86|A0A0L9UP86_PHAAN0.000e+085.80Heterogeneous nuclear ribonucleoprotein OS=Phaseol... [more]
tr|A0A4D6NAU0|A0A4D6NAU0_VIGUN0.000e+086.08Heterogeneous nuclear ribonucleoprotein A1/A3 OS=V... [more]
tr|V7C0S6|V7C0S6_PHAVU0.000e+083.90RRM domain-containing protein OS=Phaseolus vulgari... [more]
tr|A0A3Q0F437|A0A3Q0F437_VIGRR0.000e+080.48Heterogeneous nuclear ribonucleoprotein 1 OS=Vigna... [more]
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BLAST of Cc_v2.0_23409.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 10
Match NameE-valueIdentityDescription
sp|O94432|YHKF_SCHPO1.776e-5140.85Uncharacterized RNA-binding protein C660.15 OS=Sch... [more]
sp|Q920Q6|MSI2H_MOUSE1.185e-4746.37RNA-binding protein Musashi homolog 2 OS=Mus muscu... [more]
sp|Q96DH6|MSI2H_HUMAN1.417e-4746.37RNA-binding protein Musashi homolog 2 OS=Homo sapi... [more]
sp|O43347|MSI1H_HUMAN1.814e-4641.70RNA-binding protein Musashi homolog 1 OS=Homo sapi... [more]
sp|G5EFS2|MSI1H_CAEEL2.531e-4642.39RNA-binding protein Musashi homolog 1 OS=Caenorhab... [more]
sp|Q8K3P4|MSI1H_RAT3.877e-4641.70RNA-binding protein Musashi homolog 1 OS=Rattus no... [more]
sp|Q61474|MSI1H_MOUSE4.087e-4641.70RNA-binding protein Musashi homolog 1 OS=Mus muscu... [more]
sp|P48809|RB27C_DROME1.063e-4538.49Heterogeneous nuclear ribonucleoprotein 27C OS=Dro... [more]
sp|Q99383|HRP1_YEAST1.392e-4545.29Nuclear polyadenylated RNA-binding protein 4 OS=Sa... [more]
sp|Q9VVE5|MSIR6_DROME1.737e-4543.15RNA-binding protein Musashi homolog Rbp6 OS=Drosop... [more]
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BLAST of Cc_v2.0_23409.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|1.479e-8155.87Symbols: RBGD1 | RNA-binding glycine-rich protein ... [more]
|1.479e-8155.87Symbols: RBGD1 | RNA-binding glycine-rich protein ... [more]
|1.479e-8155.87Symbols: RBGD1 | RNA-binding glycine-rich protein ... [more]
|3.215e-6053.48Symbols: HLP1, RBGD5 | RNA-binding glycine-rich pr... [more]
|4.614e-5847.50Symbols: RBGD3 | RNA-binding glycine-rich protein ... [more]
|3.782e-5744.29Symbols: no symbol available | no full name availa... [more]
|4.756e-5745.24Symbols: no symbol available | no full name availa... [more]
|5.846e-5746.48Symbols: no symbol available | no full name availa... [more]
|5.846e-5746.48Symbols: no symbol available | no full name availa... [more]
|5.846e-5746.48Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.70.330:FF:000580coord: 121..257
e-value: 2.5E-58
score: 198.0
NoneNo IPR availableFUNFAMG3DSA:3.30.70.330:FF:000051coord: 39..120
e-value: 5.3E-39
score: 134.0
NoneNo IPR availablePANTHERPTHR48033RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 23..351
NoneNo IPR availableCDDcd12325RRM1_hnRNPA_hnRNPD_likecoord: 42..112
e-value: 3.12226E-35
score: 121.476
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 125..266
e-value: 1.8E-25
score: 91.6
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 38..121
e-value: 2.5E-24
score: 87.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 42..109
e-value: 2.9E-10
score: 51.2
coord: 131..199
e-value: 1.4E-13
score: 61.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 129..207
score: 18.649113
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 40..116
score: 16.295467
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 127..212
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 32..120

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_23409.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_23409.1; Name=Cc_v2.0_23409.1; organism=Cajanus cajan; type=mRNA; length=1062bp
ATGGATAATTATTACCTTTCTCAACACTCCCAATTCGAATCTGAGACTGA
CGCCTACAATGCTGATGTCAATGGCGATCACGCTAAGCCTTCTTTCAATC
GTCGCGATTCCTCTTCAGGAAAACTCTTCGTTGGAGGCATTTCTTGGGAG
ACTTCTCAAGAGTCATTTTTTAATTACTTCAGCAAATATGGAGAAGTAAC
AGATTCAGTGATAATGACGAATAAACTTTCTGGAAGGCCACGTGGGTTTG
GCTTTGTAACATTTGCCGATTCAGCTGTTGCAGATGAAGTTTTGGCACAA
GAACATACCATTGATGGCAGAGTGGTTGAAGTGAAGAGGACAGTCCCTAG
GGAGGACATGGAAGTTATTGGAGTATTAAAAACAAAGAAGATATTTGTTG
GGGGAATACCCCAGTTTTTCGCTGATGATGATTTGAAGGAATACTTTTCA
CCTTATGGAGATGTTATTGACTGCCAAATCATGCTAGATCACAATAGTGG
GCGATCTAGAGGCTTTGGATTTGTCACTTTTGACAATGAAGATTCAGTTG
ATAAGGTTTTTTCAGTGGGGAAAATACATGAAATTGGAGGCAAGCAGGTT
GAGATTAAGAGAGCTGAGCCCAAAAGATCTGCAGTTGATAACAGCAGCAA
CACCTCACGAAAATCATATGGTGGTTTTGGCAATGGAATGGATGGATATG
GCGGGAATAGTTCTAGAAATCGCAATCATGGAAAAAGAGGTGGACAGTAT
TCAGATTCTGGAATGAACGGAGCATATAACCATTTTGAGGGGAGCTTTAA
TGGAAATGCTGCCACTGTTTATGGTGGCTATTGTGGATATGGTTATGGAT
TTGGATATGGTGGGCCAATGTATTGCTTTGGCGGTTATGGAGTCAATTCA
TATGGTAATCCTATGGGTTATGGTGGCATTGCTTCCTATGGAGATGGTAA
TGCATATGGAAGAACTGGTAATTTCAATCGCACTGGTGGCTATGACAGTG
GCAAAGTGGCTGAGAAGGATGATGGTCCTACTTCTGGAAGGTACCATCCT
TACTGGAAGTGA
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_23409.1

>drCajCajn.Asha.2.0.Cc_v2.0_23409.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_23409.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_23409.1; organism=Cajanus cajan; type=polypeptide; length=353bp
MDNYYLSQHSQFESETDAYNADVNGDHAKPSFNRRDSSSGKLFVGGISWE
TSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFADSAVADEVLAQ
EHTIDGRVVEVKRTVPREDMEVIGVLKTKKIFVGGIPQFFADDDLKEYFS
PYGDVIDCQIMLDHNSGRSRGFGFVTFDNEDSVDKVFSVGKIHEIGGKQV
EIKRAEPKRSAVDNSSNTSRKSYGGFGNGMDGYGGNSSRNRNHGKRGGQY
SDSGMNGAYNHFEGSFNGNAATVYGGYCGYGYGFGYGGPMYCFGGYGVNS
YGNPMGYGGIASYGDGNAYGRTGNFNRTGGYDSGKVAEKDDGPTSGRYHP
YWK
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mRNA from alignment at CcLG10_v2.0:3012824..3016780+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_23409.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_23409.1; Name=Cc_v2.0_23409.1; organism=Cajanus cajan; type=mRNA; length=3957bp; location=Sequence derived from: CcLG10_v2.0:3012824..3016780+ (Cajanus cajan
AAAAAATTTCCGTTGATGAAGTTAGCGGTAGCGGGGAAGTGAATAAAGTG
AGGTATAGTTTCATAACCGttcgagttgtgcttctgcgtgtgcttgtgct
tctacttctacttccacttttaGGGTTTTCCAGTCTTCTAGCCTCTGCGT
GTCCATGCACAATCTTTCTCCATTGGAACTCGCGCTGTTGTGTGTGTAGG
GTTTGGGTTTGACAATGGATAATTATTACCTTTCTCAACACTCCCAATTC
GAATCTGAGACTGACGCCTACAATGCTGATGTCAATGGCGATCACGCTAA
GCCTTCTTTCAATCGTCGCGATTCCTCTTCAGGGTTACTTCCTCTTCTAC
CACTCTTTCTGCGTCCAATTACATTATTTTTATCTATTAATTCTCAATTC
CTTATTTTTTTCTTCAGAAAACTCTTCGTTGGAGGCATTTCTTGGGAGAC
TTCTCAAGGTATTCTCTCTTCTCTCATGAATTTAGTCTTTTCTTCATGGA
CTCGAGAGTTTGTTCTGGTGCATGTTTTTTTTCCACTGTATGCTTGTTCT
TCAATTACTCACAATTTTCTATTCCATGCTCGCTTAAGATCTTAACTAGG
TGCGAATCTAATGAAATATTTAATGCATAGTTATTAATTTTGGACAGTGG
CCTACCATAGTTGttagaatcagacgatttgatgtgatttggtgagcttt
tcatatcatatgatgaatcttataatattgaatcttatgacacatgaatg
aattggtgtaattttgtatcatccatacgaagcatgcgattcaactattc
tctctctctatatatatatattgctttcctttcactaattatcatgaaaa
agattgagaagtcatacaagcaaagtgttaaatgaaaaggaattggagga
ctatttttgaacttgttctatttgattatttgtcactcatcattcaatgc
acgctctttatatggctattacattgctttgtttccattcttccaaaaca
gaggctttgcaaaatcagatataactaataaaataattgtcacatgagac
ttatgattaagttgtttttatctattttcttagcttataattattacatt
gaacactatagtatatatcatttatatgatatatttgtagttttattcat
tgttcatgaatcttacatttcaatacaaattatgattcatgagtgaaaTG
TCAACTCCCCCATCCCCGAGAATAGCGCAGTTTTGAGGGCAAATATGATT
TTTTGACATGACTTACTGTTATGCTGTCACTGTGCTGCAATTGGCCACTG
TTTTCGCCACAATTGCAGCATGGATGCTATAAAAATGCACTGCTTTGCAA
GTCATGTAGCGCAGCCTAAGGCCATTCCACAGCACTATGCCGCAACACTG
GGGCTACAGAGCACTATTGATTTAGTGTACAATAATATTTTACTTTGCTT
AAGTGTCAATGCAATATCTTCTATGCTTGATACCAATCCAGTGATTTGAA
GCCATTAGTCCATTACTATTGTATTATAGCCTGTTGTGATTTTGAGCCTG
TCTTATTTGTTCATGAAAATTAGTTTCTGTTCCCGATTATTTTATGGTGA
ATATTTCTACTACTTTAATGAGTATTTGAAATACCAGTTAAGAGTACTTA
CTTGAAGCTGAATATGGTCCTGGTTTCTTTTTTATGTTGGTTGTTGATAc
tctctggtttcgaatataagaaggaaaaaaacttgtattttttggtctca
aatataagtaaatttcaattaatttcactctatttaaatgctatcatctc
caaaatattcctccatttgattgagattgtattttcaataattattttta
ctcttaatatcaagtttcaaggtagggtagtctaggaaaataagttattt
ttaaaaggggtttagtgaaattaaatgatgttaaccacctttcttagtta
gtgtgaatttagttttttttTGCTTATATTTGAAACCAAAAGGAGTATAT
ATATATTAGTTTGTTATCTGGTGCACAATACTATTAAGGATAAGGTTGAA
ATGTGTATCAGACTCAGTGTTTGTGTAGTATTTTTTTCTTCATGGTTGGC
TTATGCCATATATGCAAATCAAGGACTGTTTCTTTGATACAGAATACCAT
TTGTCATTATGTTTATTCATTCATTTTTTGTTGTTTACTTTTTTTTTTTA
AATCTCTTTACCAAAGTGAAAAGATACAATTCAAAGAAAGTAGAAGACAA
ATCTTATGTTGCTTTATGCATGTAATTTCCTCATTTTTTTTGTCAGAGTC
ATTTTTTAATTACTTCAGCAAATATGGAGAAGTAACAGATTCAGTGATAA
TGACGAATAAACTTTCTGGAAGGCCACGTGGGTTTGGCTTTGTAACATTT
GCCGATTCAGCTGTTGCAGATGAAGTTTTGGCACAAGAACATACCATTGA
TGGCAGAGTGGTAAGTTCTTGTTTCAAACATGTAGGTGCAAACATTGGAG
CACATATTCTTGCCCCTGATGACAAATTCAATTTTTTTGTATTAGGTTGA
AGTGAAGAGGACAGTCCCTAGGGAGGACATGGAAGTTATTGGAGTATTAA
AAACAAAGAAGATATTTGTTGGGGGAATACCCCAGTTTTTCGCTGATGGT
ATAGTGAATGCACCACCCTTACTTTTTAAGGTTATATTGGAATTTGTGTA
TTCTGTCTTCTGACTATCATGGATTGTGTACATTGTAGATGATTTGAAGG
AATACTTTTCACCTTATGGAGATGTTATTGACTGCCAAATCATGCTAGAT
CACAATAGTGGGCGATCTAGAGGCTTTGGATTTGTCACTTTTGACAATGA
AGATTCAGTTGATAAGGTTTTTTCAGTGGGGAAAATACATGAAATTGGAG
GCAAGCAGGTCAGTGAATCTGTTGAAATTAAAATAAAATATTCTTATAGC
ACTGCCTCAGAAGCTGATGTTATTTTTTTGTTTATTCTTTTGGATACCCT
TGTCTGACAATAACTATAGGTTGAGATTAAGAGAGCTGAGCCCAAAAGAT
CTGCAGTTGATAACAGCAGCAACACCTCACGAAAATCATATGGTGGTTTT
GGCAATGGAATGGATGGATATGGCGGGAATAGTTCTAGAAATCGCAATCA
TGGAAAAAGAGGTGGACAGTATTCAGATTCTGGAATGAACGGAGCATATA
ACCATTTTGAGGGGAGCTTTAATGGAAATGCTGCCACTGTTTATGGTGGC
TATTGTGGATATGGTTATGGATTTGGATATGGTGGGCCAATGTATTGCTT
TGGCGGTTATGGAGTCAATTCATATGGTAATCCTATGGGTTATGGTGGCA
TTGCTTCCTATGGAGATGGTAATGCATATGGAAGAACTGGTAATTTCAAT
CGCACTGGTGGCTATGACAGTGGCAAAGTGGCTGAGAAGGATGATGGTCC
TACTTCTGGAAGGTACCATCCTTACTGGAAGTGATTTGCTATACAAAGTC
AGCAGACCGTGCAATGCCTAATGGTATGGCTGCAGCAGCAGTACCACCCC
TCAGGTTTGCTCCAGATATCATTCATTCAGATCGCAATTTGGAAAACAAA
AAGTATGTAAGTTGTATCTGATGGATTTTGCAAAACTTGAATTTCTTTGA
TAAGTACATGGCGGATTTCTGGAAGCGTCATATAATGAGAGATAGACGCT
GGTAATTTAGTTACCAAAGTCCAAAATCACACATACACATAAATTTCTCG
CTGCAACTATGTTAAATGTCAGGTTTATATTCAAAACCCTCTCGAGGGAC
ATGGTATACATACTAGAGCCAAGACGAGGTGAACATTGGTTTATCTAGGT
TTTAAGCGAATTTGTTCGATATGACATAATTTAGGAGTAAACTTATATTT
TTGTATATATTGAAATACCTTTGAATTGTGTTTTTAATATTCTGGTTGAA
ATATTTG
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Coding sequence (CDS) from alignment at CcLG10_v2.0:3012824..3016780+

>drCajCajn.Asha.2.0.Cc_v2.0_23409.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_23409.1; Name=Cc_v2.0_23409.1; organism=Cajanus cajan; type=CDS; length=1062bp; location=Sequence derived from: CcLG10_v2.0:3012824..3016780+ (Cajanus cajan
ATGGATAATTATTACCTTTCTCAACACTCCCAATTCGAATCTGAGACTGA
CGCCTACAATGCTGATGTCAATGGCGATCACGCTAAGCCTTCTTTCAATC
GTCGCGATTCCTCTTCAGGAAAACTCTTCGTTGGAGGCATTTCTTGGGAG
ACTTCTCAAGAGTCATTTTTTAATTACTTCAGCAAATATGGAGAAGTAAC
AGATTCAGTGATAATGACGAATAAACTTTCTGGAAGGCCACGTGGGTTTG
GCTTTGTAACATTTGCCGATTCAGCTGTTGCAGATGAAGTTTTGGCACAA
GAACATACCATTGATGGCAGAGTGGTTGAAGTGAAGAGGACAGTCCCTAG
GGAGGACATGGAAGTTATTGGAGTATTAAAAACAAAGAAGATATTTGTTG
GGGGAATACCCCAGTTTTTCGCTGATGATGATTTGAAGGAATACTTTTCA
CCTTATGGAGATGTTATTGACTGCCAAATCATGCTAGATCACAATAGTGG
GCGATCTAGAGGCTTTGGATTTGTCACTTTTGACAATGAAGATTCAGTTG
ATAAGGTTTTTTCAGTGGGGAAAATACATGAAATTGGAGGCAAGCAGGTT
GAGATTAAGAGAGCTGAGCCCAAAAGATCTGCAGTTGATAACAGCAGCAA
CACCTCACGAAAATCATATGGTGGTTTTGGCAATGGAATGGATGGATATG
GCGGGAATAGTTCTAGAAATCGCAATCATGGAAAAAGAGGTGGACAGTAT
TCAGATTCTGGAATGAACGGAGCATATAACCATTTTGAGGGGAGCTTTAA
TGGAAATGCTGCCACTGTTTATGGTGGCTATTGTGGATATGGTTATGGAT
TTGGATATGGTGGGCCAATGTATTGCTTTGGCGGTTATGGAGTCAATTCA
TATGGTAATCCTATGGGTTATGGTGGCATTGCTTCCTATGGAGATGGTAA
TGCATATGGAAGAACTGGTAATTTCAATCGCACTGGTGGCTATGACAGTG
GCAAAGTGGCTGAGAAGGATGATGGTCCTACTTCTGGAAGGTACCATCCT
TACTGGAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding