Psat01G0034300-T1

Transcript Overview
NamePsat01G0034300-T1
Unique NamePsat01G0034300-T1_zw6_v1
TypemRNA
OrganismPisum sativum (pea)
Sequence length378
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr1chromosomechr1:22523652..22524115 +Pisum sativum cv. Zhongwan6 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsL008Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vuzwsL001Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuzwsL107Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anzwsL0547Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anzwsL0836Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cazwsL006Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
pszwsL003Pisum sativum Cameor genome v1aPisum sativum
tifzwsL006Vicia faba cv. Tiffany genome v1.0Vicia faba
pvzwsL117Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvzwsL444Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vrvzwsL351Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vuazwsL004Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuazwsL097Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vsszwsL115Vicia sativa cv. Studenica genome v1.0Vicia sativa
canzwsL006Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.1g301080.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_004488504.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg10505.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.1g244920.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_23535Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Psat01G0034300Psat01G0034300_zw6_v1Pisum sativumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat01G0034300-T1.exon1Psat01G0034300-T1.exon1_zw6_v1Pisum sativumexon
Psat01G0034300-T1.exon2Psat01G0034300-T1.exon2_zw6_v1Pisum sativumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat01G0034300-T1.cdsPsat01G0034300-T1.cds_zw6_v1Pisum sativumCDS
Psat01G0034300-T1.cdsPsat01G0034300-T1.cds_zw6_v1_2Pisum sativumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Psat01G0034300-T1_zw6_v1Psat01G0034300-T1_zw6_v1Pisum sativumpolypeptide
Psat01G0034300-T1_zw6_v1Psat01G0034300-T1_zw6_v1-proteinPisum sativumpolypeptide


Homology
BLAST of Psat01G0034300-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XIA1|A0A1S2XIA1_CICAR (uncharacterized protein LOC101510526 OS=Cicer arietinum OX=3827 GN=LOC101510526 PE=4 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 9.237e-60
Identity = 93/125 (74.40%), Postives = 101/125 (80.80%), Query Frame = 0
Query:    1 MATTCKYLIVIIFLTLLITGTYCQCPLNSLFIITRMTGAKIGGKTQWRVTVVNKCNCPLSQIILNCEGFQSTMPIDRTILLKRGDNCLLYNGHALSGNDANQFAYAWDTPFNLYPVSAVTGSPCK 125
            M  T KYLI II LT++ITG+  QCPLNSL IITR TGA I GK QW V +VNKCNC LS+IILNC+GFQSTMPIDRTIL+K+GD C L NGHAL G D NQFAYAWD PFNLYP SAVTG PCK
Sbjct:    1 MEITYKYLISIILLTMVITGSCTQCPLNSLLIITRRTGAIIQGKPQWTVLIVNKCNCALSKIILNCQGFQSTMPIDRTILIKQGDYCYLNNGHALVGGDGNQFAYAWDYPFNLYPESAVTGPPCK 125          
BLAST of Psat01G0034300-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A072UAI3|A0A072UAI3_MEDTR (Beta-1,3-N-acetylglucosaminyltransferase family protein OS=Medicago truncatula OX=3880 GN=25497058 PE=4 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 5.442e-57
Identity = 84/125 (67.20%), Postives = 99/125 (79.20%), Query Frame = 0
Query:    1 MATTCKYLIVIIFLTLLITGTYCQCPLNSLFIITRMTGAKIGGKTQWRVTVVNKCNCPLSQIILNCEGFQSTMPIDRTILLKRGDNCLLYNGHALSGNDANQFAYAWDTPFNLYPVSAVTGSPCK 125
            M +T K  I II LTL ITG+Y  CPL SLFII   TG  +GGK  W+VTV+NKC CP SQI++NC+GFQS+MPID T+L K+GDNCLL+NGHALSG D NQFAYAWD+ FN Y VS+VTG+PCK
Sbjct:    1 MESTSKCFISIIILTLAITGSYAACPLKSLFIIVAKTGGVVGGKPVWKVTVINKCFCPQSQIMINCKGFQSSMPIDPTVLKKQGDNCLLFNGHALSGGDGNQFAYAWDSAFNFYAVSSVTGTPCK 125          
BLAST of Psat01G0034300-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Z6Z3|A0A1S2Z6Z3_CICAR (uncharacterized protein LOC101496092 OS=Cicer arietinum OX=3827 GN=LOC101496092 PE=4 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.357e-47
Identity = 72/125 (57.60%), Postives = 96/125 (76.80%), Query Frame = 0
Query:    1 MATTCKYLIVIIFLTLLITGTYCQCPLNSLFIITRMTGAKIGGKTQWRVTVVNKCNCPLSQIILNCEGFQSTMPIDRTILLKRGDNCLLYNGHALSGNDANQFAYAWDTPFNLYPVSAVTGSPCK 125
            M TT KYLI I+FLTL+I G+ C CPLN+L I+ R T   + GK  W+V+V+N CNC  SQI+L+C+GFQ+  PIDR++L+ +GDNCLL+NGHAL G++ ++FAYAWD PF   P+S+VT  PCK
Sbjct:    1 METTFKYLISIVFLTLVIKGS-CDCPLNTLQIVQRKTVGVVQGKPVWQVSVINNCNCDQSQILLSCKGFQTAEPIDRSVLIIQGDNCLLFNGHALGGHNTDEFAYAWDAPFPFAPISSVTVPPCK 124          
BLAST of Psat01G0034300-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NIM1|A0A2Z6NIM1_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_19770 PE=4 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.976e-47
Identity = 76/125 (60.80%), Postives = 96/125 (76.80%), Query Frame = 0
Query:    1 MATTCKYLIVIIFLTLLITGTYCQCPLNSLFIITRMTGAKIGGKTQWRVTVVNKCNCPLSQIILNCEGFQSTMPIDRTILLKRGDNCLLYNGHALSGNDANQFAYAWDTPFNLYPVSAVTGSPCK 125
            M T  KYLI  IFLTL+I G+ C CPLNSL I+ R+ G ++ GK+QW V+V+N CNCP SQI+L+C+GFQ+   I+ TIL K+GDNCLLYNGHAL  ND ++FAYAWD  F   P+S+VTGSPC+
Sbjct:    1 METAFKYLISTIFLTLVIKGS-CNCPLNSLQIVQRLQG-QVQGKSQWIVSVINHCNCPQSQILLSCKGFQTVEGINPTILAKQGDNCLLYNGHALYPNDIDEFAYAWDPSFPFVPISSVTGSPCR 123          
BLAST of Psat01G0034300-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A072VGY7|A0A072VGY7_MEDTR (Beta-1,3-N-acetylglucosaminyltransferase family protein OS=Medicago truncatula OX=3880 GN=MTR_1g048300 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.567e-40
Identity = 68/124 (54.84%), Postives = 86/124 (69.35%), Query Frame = 0
Query:    1 MATTCKYLIVIIFLTLLITGTYCQCPLNSLFIITRMTGAKIGGKTQWRVTVVNKCNCPLSQIILNCEGFQSTMPIDRTILLKRGDNCLLYNGHALSGNDANQFAYAWDTPFNLYPVSAVTGSPC 124
            M TT KYLI IIFLTL+I GT   CPLN+L I     G  I GK QWRV++ N CNC  SQI+L+C+GFQ+ + ID  IL  +GD CLLYNGH L+ N+ + F+YAWDT +   PVS+++  PC
Sbjct:    1 METTFKYLISIIFLTLVIKGTCYNCPLNTLQIAQTKFGPPIQGKPQWRVSITNNCNCVQSQILLSCKGFQTALSIDPLILKIQGDTCLLYNGHVLAYNNTDAFSYAWDTAYPFAPVSSISSPPC 124          
BLAST of Psat01G0034300-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A371GCL2|A0A371GCL2_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_30171 PE=4 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.022e-38
Identity = 69/125 (55.20%), Postives = 86/125 (68.80%), Query Frame = 0
Query:    1 MATTCKYLIVIIFLTLLITGTYCQCPLNSLFIITRMTGAKIGGKTQWRVTVVNKCNCPLSQIILNCEGFQSTMPIDRTILLKRGDNCLLYNGHALSGNDANQFAYAWDTPFNLYPVSAVTGSPCK 125
            MATT KYL  I+FLTL+I G+ C C LN++ I T  +G +I GK +W VTV+N CNC  SQI L+C+GFQS   ID +IL   GD+CLL NG+ L G+DA  F+YAWD PF L P S+V   PC 
Sbjct:    1 MATTIKYLSSILFLTLIIKGS-CDCSLNNINIGTTRSGREIQGKPEWNVTVINNCNCEQSQIKLSCKGFQSAESIDPSILSIDGDSCLLINGNPLKGSDAVNFSYAWDPPFLLLPASSVISGPCS 124          
BLAST of Psat01G0034300-T1 vs. UniProtKB/TrEMBL
Match: tr|C6T437|C6T437_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100527363 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 3.632e-36
Identity = 65/125 (52.00%), Postives = 84/125 (67.20%), Query Frame = 0
Query:    1 MATTCKYLIVIIFLTLLITGTYCQCPLNSLFIITRMTGAKIGGKTQWRVTVVNKCNCPLSQIILNCEGFQSTMPIDRTILLKRGDNCLLYNGHALSGNDANQFAYAWDTPFNLYPVSAVTGSPCK 125
            MATT KY   I+FLTL+I G+   C LN++ I T  TG +I G+ +W VTV+N CNC  SQI L+C+GFQS   +D +IL   GD+CLL NG+ + G+D   F+YAWD PF L P S+V G PC 
Sbjct:    1 MATTFKYFTSILFLTLVIKGSCDDCSLNNINIGTSRTGREIQGQPEWNVTVINNCNCEQSQIKLSCKGFQSAESVDPSILSMEGDSCLLINGNPMKGSDTVNFSYAWDPPFLLLPTSSVLG-PCS 124          
BLAST of Psat01G0034300-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2R602|A0A0B2R602_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_026729 PE=4 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 3.632e-36
Identity = 65/125 (52.00%), Postives = 84/125 (67.20%), Query Frame = 0
Query:    1 MATTCKYLIVIIFLTLLITGTYCQCPLNSLFIITRMTGAKIGGKTQWRVTVVNKCNCPLSQIILNCEGFQSTMPIDRTILLKRGDNCLLYNGHALSGNDANQFAYAWDTPFNLYPVSAVTGSPCK 125
            MATT KY   I+FLTL+I G+   C LN++ I T  TG +I G+ +W VTV+N CNC  SQI L+C+GFQS   +D +IL   GD+CLL NG+ + G+D   F+YAWD PF L P S+V G PC 
Sbjct:    1 MATTFKYFTSILFLTLVIKGSCDDCSLNNINIGTSRTGREIQGQPEWNVTVINNCNCEQSQIKLSCKGFQSAESVDPSILSMEGDSCLLINGNPMKGSDTVNFSYAWDPPFLLLPTSSVLG-PCS 124          
BLAST of Psat01G0034300-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MVU8|A0A4D6MVU8_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g555 PE=4 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-34
Identity = 64/122 (52.46%), Postives = 86/122 (70.49%), Query Frame = 0
Query:    3 TTCKYLIVIIFLTLLITGTYCQCPLNSLFIITRMTGAKIGGKTQWRVTVVNKCNCPLSQIILNCEGFQSTMPIDRTILLKRGDNCLLYNGHALSGNDANQFAYAWDTPFNLYPVSAVTGSPC 124
            TT K+L  IIFL L+I G+ C C LN++ I T  TG +IGG+ +W VTV+N C+C  S+I L+C+GFQS+  ID +IL   GDNCLL +G+ L G D   F+YAWD PF ++P+S+V G PC
Sbjct:   13 TTFKFLTSIIFLFLIIKGS-CDCSLNNINIGTARTGREIGGQPEWNVTVINNCSCQQSEIKLSCKGFQSSESIDPSILSMEGDNCLLISGNPLKGFDTVNFSYAWDLPFIMFPLSSVIG-PC 132          
BLAST of Psat01G0034300-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q7YB86|A0A3Q7YB86_CICAR (uncharacterized protein LOC101493397 OS=Cicer arietinum OX=3827 GN=LOC101493397 PE=4 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.693e-33
Identity = 64/121 (52.89%), Postives = 76/121 (62.81%), Query Frame = 0
Query:    6 KYLIVIIFLTLLITGTYCQ--CPLNSLFIITRMTGAKIGGKTQWRVTVVNKCNCPLSQIILNCEGFQSTMPIDRTILLKRGDNCLLYNGHALSGNDANQFAYAWDTPFNLYPVSAVTGSPC 124
            K LI I+FLT +I G+ C+  CPL SL  +   TG  I GK +W V V N C C  SQI L C+GFQS   ID  IL K GDNCLL NGH L  +D   F YAWDTP+   P+S++TG PC
Sbjct:   23 KCLISILFLTFVIKGS-CEDSCPLKSLNTVQTKTGKVIQGKPEWNVLVTNNCICSQSQIKLACKGFQSVQKIDPLILSKNGDNCLLSNGHILVDSDREAFTYAWDTPYLFIPISSITGPPC 142          
BLAST of Psat01G0034300-T1 vs. Araport11
Match: AT4G32110.1 (| Beta-1%2C3-N-Acetylglucosaminyltransferase family protein | Chr4:15515769-15516408 REVERSE LENGTH=124 | 201606)

HSP 1 Score: 81.6481 bits (200), Expect = 7.953e-21
Identity = 46/119 (38.66%), Postives = 61/119 (51.26%), Query Frame = 0
Query:    2 ATTCKYLIVIIFLTLLITGTYCQCPLNSLFIITRMTGAKIGGKTQWRVTVVNKCN-CPLSQIILNCEGFQSTMPIDRTILLKRGDNCLLYNGHALSGNDANQFAYAWDTPFNLYPVSAV 119
            +  CK L +++FL  +  G Y  C LNSL +    TG  +  K +W V V N CN C      L C GF S  PID ++LLK GD CL+  G  +  +    F Y WDT F+L  +  V
Sbjct:    3 SNACKLLCLVLFLAFVNQG-YGDCSLNSLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQNTELLCVGFNSVTPIDTSLLLKSGDACLVNAGKFIVPHVDIVFKYVWDTSFDLKVIDGV 120          
BLAST of Psat01G0034300-T1 vs. Araport11
Match: AT4G32090.1 (| Beta-1%2C3-N-Acetylglucosaminyltransferase family protein | Chr4:15509990-15510820 REVERSE LENGTH=124 | 201606)

HSP 1 Score: 79.7221 bits (195), Expect = 4.650e-20
Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 0
Query:    1 MATTCKYLIVIIFLTLLITGTYCQCPLNSLFIITRMTGAKIGGKTQWRVTVVNKCNCPLSQIILNCEGFQSTMPIDRTILLKRGDNCLLYNGHALSGNDANQFAYAWDTPFNLYPVSAVTGSPC 124
            MA   K  +V++ L+++  G  C C    + I    TG +IGG+ +W+VTV+N CNC    + L+C GF    P+   +L  +G+ CL+  G AL      QF YA   P+   PV +     C
Sbjct:    1 MAFALKCFVVVLLLSMVSHG-LCLCTFGKIQIGAVRTGREIGGQPEWKVTVINTCNCFQKHVTLSCGGFAPAKPVKPLLLQPQGNTCLMIKGAALPAGATAQFTYAGQ-PYIFRPVGSKVDPSC 122          
BLAST of Psat01G0034300-T1 vs. Araport11
Match: AT4G32105.1 (| Beta-1%2C3-N-Acetylglucosaminyltransferase family protein | Chr4:15513342-15513958 REVERSE LENGTH=124 | 201606)

HSP 1 Score: 77.0258 bits (188), Expect = 4.465e-19
Identity = 45/123 (36.59%), Postives = 62/123 (50.41%), Query Frame = 0
Query:    2 ATTCKYLIVIIFLTLLITGTYCQCPLNSLFIITRMTGAKIGGKTQWRVTVVNKCN-CPLSQIILNCEGFQSTMPIDRTILLKRGDNCLLYNGHALSGNDANQFAYAWDTPFNLYPVSAVTGSP 123
            +  CK L +++FL  +  G Y  C LN L +    TG  +  K +W V V N CN C      L+C GFQS  P+  ++L K GD CLL  G+ +  +    F Y WDT F+L  +  V   P
Sbjct:    3 SNACKVLCLVLFLAFVNQG-YGDCHLNYLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQYTKLSCVGFQSVTPVATSLLSKSGDICLLNAGNFIFPHVDFVFNYVWDTSFDLKVIDGVIVCP 124          
BLAST of Psat01G0034300-T1 vs. Araport11
Match: AT4G32100.1 (| Beta-1%2C3-N-Acetylglucosaminyltransferase family protein | Chr4:15511757-15512218 REVERSE LENGTH=122 | 201606)

HSP 1 Score: 73.9442 bits (180), Expect = 8.215e-18
Identity = 45/123 (36.59%), Postives = 64/123 (52.03%), Query Frame = 0
Query:    1 MAT-TCKYLIVIIFLTLLITG----TYCQCPLNSLFIITRMTGAKIGGKTQWRVTVVNKCNCPLSQIILNCEGFQSTMPIDRTILLKRGDNCLLYNGHALSGNDANQFAYAWDTPFNLYPVSA 118
            MAT  CK+L +++    +  G    +Y    L SL +I   TG  +  K +W V V+N   C  +   L+C  F+S  PID  +L K GD CLL NG ++  +D + F Y WDT F+L  V  
Sbjct:    1 MATNACKFLCLVLLFAFVTQGYGDDSY---SLESLSVIQSKTGNMVENKPEWEVKVLNSSPCYFTHTTLSCVRFKSVTPIDSKVLSKSGDTCLLGNGDSI--HDIS-FKYVWDTSFDLKVVDG 117          
The following BLAST results are available for this feature:
BLAST of Psat01G0034300-T1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-09 (Blastp of Pisum sativum cv. Zhongwan6 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2XIA1|A0A1S2XIA1_CICAR9.237e-6074.40uncharacterized protein LOC101510526 OS=Cicer arie... [more]
tr|A0A072UAI3|A0A072UAI3_MEDTR5.442e-5767.20Beta-1,3-N-acetylglucosaminyltransferase family pr... [more]
tr|A0A1S2Z6Z3|A0A1S2Z6Z3_CICAR1.357e-4757.60uncharacterized protein LOC101496092 OS=Cicer arie... [more]
tr|A0A2Z6NIM1|A0A2Z6NIM1_TRISU2.976e-4760.80Uncharacterized protein OS=Trifolium subterraneum ... [more]
tr|A0A072VGY7|A0A072VGY7_MEDTR1.567e-4054.84Beta-1,3-N-acetylglucosaminyltransferase family pr... [more]
tr|A0A371GCL2|A0A371GCL2_MUCPR1.022e-3855.20Uncharacterized protein (Fragment) OS=Mucuna pruri... [more]
tr|C6T437|C6T437_SOYBN3.632e-3652.00Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0B2R602|A0A0B2R602_GLYSO3.632e-3652.00Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|A0A4D6MVU8|A0A4D6MVU8_VIGUN1.094e-3452.46Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|A0A3Q7YB86|A0A3Q7YB86_CICAR2.693e-3352.89uncharacterized protein LOC101493397 OS=Cicer arie... [more]
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BLAST of Psat01G0034300-T1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-09 (Blastp of Pisum sativum cv. Zhongwan6 proteins vs UniProt Swissprot )
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Psat01G0034300-T1 vs. Araport11
Analysis Date: 2023-05-09 (Blastp of Pisum sativum cv. Zhongwan6 proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
AT4G32110.17.953e-2138.66| Beta-1%2C3-N-Acetylglucosaminyltransferase famil... [more]
AT4G32090.14.650e-2033.87| Beta-1%2C3-N-Acetylglucosaminyltransferase famil... [more]
AT4G32105.14.465e-1936.59| Beta-1%2C3-N-Acetylglucosaminyltransferase famil... [more]
AT4G32100.18.215e-1836.59| Beta-1%2C3-N-Acetylglucosaminyltransferase famil... [more]
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InterPro
Analysis Name: InterProScan Analysis for Pisum sativum cv. Zhongwan6 genome v1.0
Date Performed: 2023-05-05
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040361Tapetum determinant 1PANTHERPTHR33184PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATEDcoord: 15..118

Sequences
The following sequences are available for this feature:

mRNA sequence

>Psat01G0034300-T1_zw6_v1 ID=Psat01G0034300-T1_zw6_v1; Name=Psat01G0034300-T1; organism=Pisum sativum; type=mRNA; length=378bp
ATGGCAACCACCTGCAAGTATCTTATTGTCATCATCTTCCTTACTCTGCT
CATCACGGGAACCTATTGCCAATGTCCATTGAACAGCCTCTTCATTATCA
CAAGAATGACTGGTGCAAAAATAGGAGGCAAAACTCAATGGAGGGTTACT
GTAGTTAACAAGTGCAATTGTCCACTAAGCCAAATAATATTGAATTGTGA
AGGGTTTCAAAGTACAATGCCTATTGACCGTACAATTCTTCTTAAGAGAG
GTGATAATTGTCTCTTATATAATGGCCATGCATTGAGTGGAAATGATGCT
AATCAATTTGCCTATGCTTGGGATACACCCTTTAATCTTTATCCTGTAAG
TGCTGTTACAGGTAGTCCTTGCAAATAA
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protein sequence of Psat01G0034300-T1_zw6_v1

>Psat01G0034300-T1_zw6_v1 ID=Psat01G0034300-T1_zw6_v1; Name=Psat01G0034300-T1_zw6_v1; organism=Pisum sativum; type=polypeptide; length=125bp
MATTCKYLIVIIFLTLLITGTYCQCPLNSLFIITRMTGAKIGGKTQWRVT
VVNKCNCPLSQIILNCEGFQSTMPIDRTILLKRGDNCLLYNGHALSGNDA
NQFAYAWDTPFNLYPVSAVTGSPCK
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mRNA from alignment at chr1:22523652..22524115+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Psat01G0034300-T1_zw6_v1 ID=Psat01G0034300-T1_zw6_v1; Name=Psat01G0034300-T1; organism=Pisum sativum; type=mRNA; length=464bp; location=Sequence derived from: chr1:22523652..22524115+ (Pisum sativum
ATGGCAACCACCTGCAAGTATCTTATTGTCATCATCTTCCTTACTCTGCT CATCACGGGTATGCTTTGATAATTACTTCATGTGACAAATGCATATAAAC ATGCACATTTTCTAATATAGTTTTTTGTCCAAAATAATCTTCAGGAACCT ATTGCCAATGTCCATTGAACAGCCTCTTCATTATCACAAGAATGACTGGT GCAAAAATAGGAGGCAAAACTCAATGGAGGGTTACTGTAGTTAACAAGTG CAATTGTCCACTAAGCCAAATAATATTGAATTGTGAAGGGTTTCAAAGTA CAATGCCTATTGACCGTACAATTCTTCTTAAGAGAGGTGATAATTGTCTC TTATATAATGGCCATGCATTGAGTGGAAATGATGCTAATCAATTTGCCTA TGCTTGGGATACACCCTTTAATCTTTATCCTGTAAGTGCTGTTACAGGTA GTCCTTGCAAATAA
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Coding sequence (CDS) from alignment at chr1:22523652..22524115+

>Psat01G0034300-T1_zw6_v1 ID=Psat01G0034300-T1_zw6_v1; Name=Psat01G0034300-T1; organism=Pisum sativum; type=CDS; length=378bp; location=Sequence derived from: chr1:22523652..22524115+ (Pisum sativum
ATGGCAACCACCTGCAAGTATCTTATTGTCATCATCTTCCTTACTCTGCT
CATCACGGGAACCTATTGCCAATGTCCATTGAACAGCCTCTTCATTATCA
CAAGAATGACTGGTGCAAAAATAGGAGGCAAAACTCAATGGAGGGTTACT
GTAGTTAACAAGTGCAATTGTCCACTAAGCCAAATAATATTGAATTGTGA
AGGGTTTCAAAGTACAATGCCTATTGACCGTACAATTCTTCTTAAGAGAG
GTGATAATTGTCTCTTATATAATGGCCATGCATTGAGTGGAAATGATGCT
AATCAATTTGCCTATGCTTGGGATACACCCTTTAATCTTTATCCTGTAAG
TGCTGTTACAGGTAGTCCTTGCAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR040361TPD1