Psat04G0013600-T1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|G7JKF7|G7JKF7_MEDTR (Putative transcription factor C2H2 family OS=Medicago truncatula OX=3880 GN=11446421 PE=4 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 6.338e-108 Identity = 172/225 (76.44%), Postives = 183/225 (81.33%), Query Frame = 0 Query: 19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQD---PNP-DP--------SSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTT--TVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 MSQLGLIL ESLR QRE+RT+LGLLTEQMDA DS TTRRRSLKERFRFTG+G CCGATWVFRPIIRHEHHHQ+ + EGE VEQ++ PNP +P S SGMNLAAALAAERQMR SEE+SGGE TPWRVSLMKLLEETE E+ES V+EGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF Sbjct: 1 MSQLGLILQESLRSQRESRTILGLLTEQMDALDSGTTRRRSLKERFRFTGMG-CCGATWVFRPIIRHEHHHQRNE-------EGEATVEQQQQLQVQDQDPNPVEPECEAPAGSSGSGMNLAAALAAERQMRVSEEASGGEGATPWRVSLMKLLEETEGENESNAGAVVVEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 217
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3JT98|A0A2K3JT98_TRIPR (RING/U-box domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g050318 PE=4 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 5.954e-106 Identity = 167/219 (76.26%), Postives = 177/219 (80.82%), Query Frame = 0 Query: 19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNP------DPSSSG--MNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 MSQLGLIL ESLRPQREART+LGLLTEQMD D T+RRRSLKERFRF G+G CCGATWVFRPIIRHE R+RE QVQDPNP +P SSG MNLA ALAAERQMRGSEE+SGGE GTPWRVSLMKLLEE EVE+ESTT +EG+D+VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF Sbjct: 1 MSQLGLILQESLRPQREARTILGLLTEQMDGVDLGTSRRRSLKERFRFIGMG-CCGATWVFRPIIRHE-------REREATE-----------QVQDPNPVEPECVNPGSSGSGMNLATALAAERQMRGSEEASGGEGGTPWRVSLMKLLEEKEVENESTT--VEGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 198
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LHM0|A0A2Z6LHM0_TRISU (RING-type domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_203200 PE=4 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 2.439e-97 Identity = 158/219 (72.15%), Postives = 170/219 (77.63%), Query Frame = 0 Query: 19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNP------DPSSSG--MNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 MSQLGLIL ESLRPQREART+LGLLTEQMD D+ TTRRRSLKER RFTG+G CCGATWVFRPIIRH+ ++ +RE QVQDPNP +P SSG MNLA ALAAERQMRGSEE+S GE GT WRVSLMKLL E E V+EG+D+VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF Sbjct: 1 MSQLGLILQESLRPQREARTILGLLTEQMDGLDTGTTRRRSLKERLRFTGMG-CCGATWVFRPIIRHQQQGDERVTEREATE-----------QVQDPNPVEPECVNPGSSGSGMNLATALAAERQMRGSEETSSGEGGTTWRVSLMKLL----EEKEVENEVVEGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 203
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A445K2D0|A0A445K2D0_GLYSO (RING-type domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_019069 PE=4 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 5.232e-86 Identity = 143/223 (64.13%), Postives = 155/223 (69.51%), Query Frame = 0 Query: 19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNPD--------PSSSGMNLAAALAAERQMRGSEESSGGER----GTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 MSQLGLIL ESLR +RE RT+LGLLTEQMD D + RRR+LKER RFTGIG CCGATWVFRPI+R E Q +Q+ A QDPNP+ PS + MNLAAALAAERQ+R E G R GTP RVSLM+LLEETE G+D VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRSILEILDIF Sbjct: 1 MSQLGLILQESLRTERETRTILGLLTEQMDGVDRAQRRRRTLKERLRFTGIG-CCGATWVFRPIVREEGGGAQAHQQQTNA-------------AQDPNPNGSEYVSPSPSGTSMNLAAALAAERQLRDGEGE--GRRVVAPGTPLRVSLMRLLEETEGGDAEKGGGGVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 207
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|I1KNH8|I1KNH8_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=106799504 PE=4 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 7.588e-86 Identity = 143/223 (64.13%), Postives = 155/223 (69.51%), Query Frame = 0 Query: 19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNPD--------PSSSGMNLAAALAAERQMRGSEESSGGER----GTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 MSQLGLIL ESLR +RE RT+LGLLTEQMD D + RRR+LKER RFTGIG CCGATWVFRPI+R E Q +Q+ A QDPNP+ PS + MNLAAALAAERQ+R E G R GTP RVSLM+LLEETE G+D VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRSILEILDIF Sbjct: 1 MSQLGLILQESLRTERETRTILGLLTEQMDGVDRAQRRRRTLKERLRFTGIG-CCGATWVFRPIVREEGGGAQAHQQQTNA-------------AQDPNPNDPKYVSPSPSGTSMNLAAALAAERQLRDGEGE--GRRVVAPGTPLRVSLMRLLEETEGGDAEKGGGGVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 207
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A445G0K8|A0A445G0K8_GLYSO (RING-type domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_044527 PE=4 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 1.364e-82 Identity = 147/219 (67.12%), Postives = 157/219 (71.69%), Query Frame = 0 Query: 19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPN--------PDPSSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 MSQLGLIL ESLR +REART+LGLLTEQMD+ RRR+LKER RFTGIG CCGATWVFRPI+R E Q Q+Q + ETN Q DPN P SSSGMNLAAALAAERQ R E GTP RVSLM+LLEETE + V G+D VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRSILEILDIF Sbjct: 1 MSQLGLILQESLRTEREARTILGLLTEQMDSVGRGQRRRRTLKERLRFTGIG-CCGATWVFRPIVRDEGGGAQAQQQPQ-----ETNAGQ------DPNHTGPEHVGPSQSSSGMNLAAALAAERQFREGE-------GTPLRVSLMRLLEETEGGDAAVEAV--GNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 198
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|I1MR22|I1MR22_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=100792613 PE=4 SV=2) HSP 1 Score: 254.218 bits (648), Expect = 1.364e-82 Identity = 147/219 (67.12%), Postives = 157/219 (71.69%), Query Frame = 0 Query: 19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPN--------PDPSSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 MSQLGLIL ESLR +REART+LGLLTEQMD+ RRR+LKER RFTGIG CCGATWVFRPI+R E Q Q+Q + ETN Q DPN P SSSGMNLAAALAAERQ R E GTP RVSLM+LLEETE + V G+D VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRSILEILDIF Sbjct: 1 MSQLGLILQESLRTEREARTILGLLTEQMDSVGRGQRRRRTLKERLRFTGIG-CCGATWVFRPIVRDEGGGAQAQQQPQ-----ETNAGQ------DPNHTGPEHVGPSQSSSGMNLAAALAAERQFREGE-------GTPLRVSLMRLLEETEGGDAAVEAV--GNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 198
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A371F6B2|A0A371F6B2_MUCPR (RING-type domain-containing protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_46491 PE=4 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 3.535e-81 Identity = 146/227 (64.32%), Postives = 161/227 (70.93%), Query Frame = 0 Query: 19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNPD------------PSSSGMNLAAALAAERQMRGSEESS----GGERGTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 MSQLGLIL ESLR +REART+LGLLTEQMD D RRR+LKER RF GCCGATWVFR +R E R ++ ++ +TN Q DPNP+ PS SGMNLAAALAAERQ R S E+ G RGTPWRVSLM+LLEET VE+E V G+DS+CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRSILEILDIF Sbjct: 1 MSQLGLILQESLRNEREARTILGLLTEQMDGVDGGQRRRRTLKERLRF----GCCGATWVFRHTVRDEG------RNQQHQQQQQTNAGQ------DPNPNGPDCVGPSPSPSPSGSGMNLAAALAAERQFRESHETDAIGEGEARGTPWRVSLMRLLEETAVEAEKGGAV--GNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 209
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YP08|A0A1S2YP08_CICAR (E3 ubiquitin-protein ligase COP1 OS=Cicer arietinum OX=3827 GN=LOC101490848 PE=4 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.060e-79 Identity = 150/219 (68.49%), Postives = 167/219 (76.26%), Query Frame = 0 Query: 19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNP--------DPSSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 MSQLGLIL ES QREART+LGLLT+QMDA D+ T RRR+LKERFRFTGIG CCGATWVFRP++RHEH Q+ E+++L VQDP+P PS SGMNLAAALAAERQMRG EE TPWRVSLM+LLEETEVE+ G+DSVCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRG+CPLCNRS+LEILDIF Sbjct: 1 MSQLGLILQES---QREARTILGLLTQQMDAVDTRTRRRRTLKERFRFTGIG-CCGATWVFRPVLRHEHQQQE------------EATEEQQLPVQDPDPVEPECVGPGPSGSGMNLAAALAAERQMRGPEEGE-----TPWRVSLMRLLEETEVETAVEE----GNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGSCPLCNRSVLEILDIF 194
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3S3U7|A0A0S3S3U7_PHAAN (RING-type domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G089000 PE=4 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 4.466e-76 Identity = 131/219 (59.82%), Postives = 153/219 (69.86%), Query Frame = 0 Query: 19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNPDPSSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTTTV--------MEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 MSQLG++L ESL QRE RT+LGLL++QMD +S RR+S KERF F GIG CCGATW FR +QQQ+ A ET+ Q + + + SGMNLAAALAAERQ+RG +E G GTPWRVSLM+LLEE+E + + G+DS+CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG+CPLCNRSILEILDIF Sbjct: 1 MSQLGVVLQESL--QREPRTILGLLSDQMDGVESGARRRKSFKERFGFMGIG-CCGATWGFRSDALSFTQGEQQQQ----ANHQETDPGQGS-GLDCVDQGAAGSGMNLAAALAAERQIRGPQEEVGRAPGTPWRVSLMRLLEESEGGESAAVEKEKEEEKGDVVGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 211
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT4G03965.1 (| RING/U-box superfamily protein | Chr4:1889576-1890205 FORWARD LENGTH=209 | 201606) HSP 1 Score: 181.03 bits (458), Expect = 3.478e-57 Identity = 112/227 (49.34%), Postives = 134/227 (59.03%), Query Frame = 0 Query: 19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQV---QDPNPDPSSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEET-------EVESE------STTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 MSQLG+ ++ ++ T L LL QMD D S R+R+LKER F IG CCG TW R + GE + E E ++ D P + GMNLA ALAAER R E + G TP +VSLM+LLEET E E+E S+T +DSVCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRG+CPLCNR I+EILDI+ Sbjct: 1 MSQLGVETSQAQPETPQSTTFLDLLRLQMDGLDRSRRRKRTLKERLGFKRIG-CCGPTWGLRLT----------------SNTGEDDDEPFENRLVSGSDHVTGPLNQGMNLATALAAERNYRTEETEASGSL-TPLKVSLMRLLEETAERVVVEENETERVTASASSTVRGVNNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEILDIY 209
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT4G22250.1 (| RING/U-box superfamily protein | Chr4:11767685-11768329 REVERSE LENGTH=214 | 201606) HSP 1 Score: 176.022 bits (445), Expect = 3.723e-55 Identity = 108/206 (52.43%), Postives = 125/206 (60.68%), Query Frame = 0 Query: 39 LLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQD----PNPDPSSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETE---VESESTTT--------VMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 L LL QM D T R+R+LKER RF IG CCG TW R + + H R + E EELQ++ + S +GMNLA AL AER RG E + TP RVSLM+LLEET V+ + T + G+DSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG+CPLCNR I+EILDIF Sbjct: 23 FLDLLRRQMSGHDL-TRRKRTLKERLRFKCIG-CCGPTWNLR-LTNNTTLHSPTSR----------DDEIEELQIETGLVLESDHGSGTGMNLATALEAERYNRG-ESTEAEADMTPRRVSLMRLLEETAEKIVDDDGKETEILTASIGTLTGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT1G62370.1 (| RING/U-box superfamily protein | Chr1:23072575-23073189 FORWARD LENGTH=204 | 201606) HSP 1 Score: 147.902 bits (372), Expect = 2.356e-44 Identity = 94/220 (42.73%), Postives = 129/220 (58.64%), Query Frame = 0 Query: 19 MSQLGLILHESLRPQREARTLLGLLTE--QMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFR------PII-RHEHHHQQQQRQREGAREGETNVEQEELQVQDPNPDPSSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 MSQLG +L ES R RT++ L E Q++ D + ++ +LK+R RF +G CCG R PI+ + ++ Q Q + T E + L S NLA ALA ER +EE + + V LM+LL E++ +STTT + G+D +CCVCMGR+KGAAFIPCGHT+CRVCSRE+W+NRG CPLCNRSI ++LD++ Sbjct: 1 MSQLGDLLRESEDGTRSERTMMMSLLEEDQINGGDRTMSKWTTLKQRLRFDWVG-CCGKPLTLRLRQAETPIVVDDDDDEEESQNQVVDFSDPGTGTELDCLT--------RGSTRNLAEALAEERLAHVTEEETAVTK-----VPLMRLLAESD-GCDSTTTWL-GNDPLCCVCMGREKGAAFIPCGHTYCRVCSREIWMNRGTCPLCNRSIFDVLDLY 204
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT3G25030.3 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=210 | 201606) HSP 1 Score: 127.102 bits (318), Expect = 3.733e-36 Identity = 70/158 (44.30%), Postives = 94/158 (59.49%), Query Frame = 0 Query: 82 IIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNPDPSSSGMNLAAALAAERQMRGSEESSGGERGT-PWRVSLMKLLEETEV---------ESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 +++ EH H + + + RE + ++QE V+ + L A LA ER + EE + ER P R+SLM+LLEE E E+E + ++ CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +ILE+LD+F Sbjct: 62 VMQREHRHSRDKTAWKSLRE-KLRLKQEASSVE--------GRIRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 210
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT3G25030.4 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=250 | 201606) HSP 1 Score: 124.02 bits (310), Expect = 1.949e-34 Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 0 Query: 125 MNLAAALAAERQMRGSEESSGGERGT-PWRVSLMKLLEETEV---------ESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 + L A LA ER + EE + ER P R+SLM+LLEE E E+E + ++ CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +ILE+LD+F Sbjct: 136 IRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT3G25030.2 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=250 | 201606) HSP 1 Score: 124.02 bits (310), Expect = 1.949e-34 Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 0 Query: 125 MNLAAALAAERQMRGSEESSGGERGT-PWRVSLMKLLEETEV---------ESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 + L A LA ER + EE + ER P R+SLM+LLEE E E+E + ++ CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +ILE+LD+F Sbjct: 136 IRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT3G25030.1 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=250 | 201606) HSP 1 Score: 124.02 bits (310), Expect = 1.949e-34 Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 0 Query: 125 MNLAAALAAERQMRGSEESSGGERGT-PWRVSLMKLLEETEV---------ESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 + L A LA ER + EE + ER P R+SLM+LLEE E E+E + ++ CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +ILE+LD+F Sbjct: 136 IRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT4G13100.4 (| RING/U-box superfamily protein | Chr4:7636547-7637498 REVERSE LENGTH=256 | 201606) HSP 1 Score: 107.071 bits (266), Expect = 5.492e-28 Identity = 61/125 (48.80%), Postives = 72/125 (57.60%), Query Frame = 0 Query: 125 MNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEET-----------EVESESTTTVMEGSDSV---------CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 + L LAAER E P R+SLM+LLE+ EVE E G ++V CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +IL++LDIF Sbjct: 143 LRLGTVLAAER-----------EEMQPPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 256
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT4G13100.9 (| RING/U-box superfamily protein | Chr4:7636547-7637507 REVERSE LENGTH=259 | 201606) HSP 1 Score: 107.071 bits (266), Expect = 5.551e-28 Identity = 61/125 (48.80%), Postives = 72/125 (57.60%), Query Frame = 0 Query: 125 MNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEET-----------EVESESTTTVMEGSDSV---------CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 + L LAAER E P R+SLM+LLE+ EVE E G ++V CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +IL++LDIF Sbjct: 146 LRLGTVLAAER-----------EEMQPPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 259
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT4G13100.8 (| RING/U-box superfamily protein | Chr4:7636547-7637507 REVERSE LENGTH=259 | 201606) HSP 1 Score: 107.071 bits (266), Expect = 5.551e-28 Identity = 61/125 (48.80%), Postives = 72/125 (57.60%), Query Frame = 0 Query: 125 MNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEET-----------EVESESTTTVMEGSDSV---------CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229 + L LAAER E P R+SLM+LLE+ EVE E G ++V CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +IL++LDIF Sbjct: 146 LRLGTVLAAER-----------EEMQPPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 259 The following BLAST results are available for this feature:
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-09 (Blastp of Pisum sativum cv. Zhongwan6 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-09 (Blastp of Pisum sativum cv. Zhongwan6 proteins vs UniProt Swissprot ) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Psat04G0013600-T1 vs. Araport11
Analysis Date: 2023-05-09 (Blastp of Pisum sativum cv. Zhongwan6 proteins vs arabidopsis Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Pisum sativum cv. Zhongwan6 genome v1.0
Date Performed: 2023-05-05 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat04G0013600-T1_zw6_v1 ID=Psat04G0013600-T1_zw6_v1; Name=Psat04G0013600-T1; organism=Pisum sativum; type=mRNA; length=690bpback to top protein sequence of Psat04G0013600-T1_zw6_v1 >Psat04G0013600-T1_zw6_v1 ID=Psat04G0013600-T1_zw6_v1; Name=Psat04G0013600-T1_zw6_v1; organism=Pisum sativum; type=polypeptide; length=229bpback to top mRNA from alignment at chr4:8078038..8080239- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Psat04G0013600-T1_zw6_v1 ID=Psat04G0013600-T1_zw6_v1; Name=Psat04G0013600-T1; organism=Pisum sativum; type=mRNA; length=2202bp; location=Sequence derived from: chr4:8078038..8080239- (Pisum sativumback to top Coding sequence (CDS) from alignment at chr4:8078038..8080239- >Psat04G0013600-T1_zw6_v1 ID=Psat04G0013600-T1_zw6_v1; Name=Psat04G0013600-T1; organism=Pisum sativum; type=CDS; length=690bp; location=Sequence derived from: chr4:8078038..8080239- (Pisum sativumback to top |