Va01G002640.1

Transcript Overview


Name	Va01G002640.1
Unique Name	Va01G002640.1_Jingnong6
Type	mRNA
Organism	Vigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length	330

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr1	chromosome	Chr1:1801826..1802272 -	Vigna angularis cv. Jingnong6 genome v1.7.1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna angularis cv. Jingnong6 genome v1.7.1	2024-05-08
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL	2024-05-23
InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1	2024-05-23
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot	2024-05-23
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11	2024-05-23

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
avjavjL005	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjavjL111	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjavjR185	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjavjR189	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjccR0338	Cajanus cajan Asha genome v1.0	Cajanus cajan
avjccR0434	Cajanus cajan Asha genome v1.0	Cajanus cajan
avjccR0451	Cajanus cajan Asha genome v1.0	Cajanus cajan
avjpsR215	Pisum sativum Cameor genome v1a	Pisum sativum
avjpsR299	Pisum sativum Cameor genome v1a	Pisum sativum
avjpsR306	Pisum sativum Cameor genome v1a	Pisum sativum
avjpsR315	Pisum sativum Cameor genome v1a	Pisum sativum
avjpvR247	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
avjvfhR262	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjvfhR272	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjpvR305	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
avjvfhR320	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjvfhR336	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjvrvR163	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
avjvrvR189	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
avjvrvR210	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
avjvrvR224	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
avjvuR198	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvssR259	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvuR220	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvssR271	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvuR230	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvssR292	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvssR304	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvumR168	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjccaR218	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjccaR259	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjvumR188	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjvumR209	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjccaR301	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjvumR228	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjccaR306	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjvumR275	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjvvaR296	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
avjvvaR316	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
avjvasR170	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvstR175	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvasR196	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvasR215	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvasR259	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvstR204	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvstR221	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvstR267	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvstR282	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvunR160	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
avjpvfR229	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
avjpvfR245	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
avjvunR181	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
avjpvfR287	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
avjpvfR298	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
avjpvfR336	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Va01G002640	Va01G002640_Jingnong6	Vigna angularis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va01G002640.1:exon_1_Jingnong6	Va01G002640.1:exon_1_Jingnong6	Vigna angularis	exon
Va01G002640.1:exon_2_Jingnong6	Va01G002640.1:exon_2_Jingnong6	Vigna angularis	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va01G002640.1_Jingnong6-cds	Va01G002640.1_Jingnong6-cds-Chr1_Jingnong6:1801826..1802085	Vigna angularis	CDS
Va01G002640.1_Jingnong6-cds	Va01G002640.1_Jingnong6-cds-Chr1_Jingnong6:1802203..1802272	Vigna angularis	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Va01G002640.1_Jingnong6	Va01G002640.1_Jingnong6	Vigna angularis	polypeptide
Va01G002640.1_Jingnong6	Va01G002640.1_Jingnong6-protein	Vigna angularis	polypeptide

Homology

[Close]

BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VSQ4|A0A0L9VSQ4_PHAAN (Response regulatory domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan11g082700 PE=4 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 9.080e-75
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEADDILHKKE 109
            MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEADDILHKKE
Sbjct:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEADDILHKKE 109

[Close]

BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UKV4|A0A1S3UKV4_VIGRR (Two-component response regulator ARR14-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106766448 PE=4 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 2.696e-45
Identity = 74/109 (67.89%), Postives = 89/109 (81.65%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEADDILHKKE 109
            MPMMDGYEF QFL KE IDIPF  MS D++S SMTKA  LGAC+YL+KPFD+DYWLNLWS MFKHHI+L R KK+IDSL+D++ISE S++S F    E EA++ LHKK+
Sbjct:   73 MPMMDGYEFLQFLSKEEIDIPFAXMSEDFSSISMTKAFDLGACDYLKKPFDDDYWLNLWSPMFKHHIFLRRNKKNIDSLDDDKISEKSNNSXF----EVEANNTLHKKD 177

[Close]

BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3QWL0|A0A0S3QWL0_PHAAN (Response regulatory domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G014400 PE=4 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.613e-36
Identity = 72/118 (61.02%), Postives = 85/118 (72.03%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKP-------FDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETS-DSSEFASDMEAEA-DDILHKKE 109
            MPMMDGYEF  FL KEVID+PF+MMS D T  S  KA +LGAC+Y  KP       F+N +   LWS MF+HH +  RI+K+IDSLED+EISETS +SSEF+SD E EA DD  HKKE
Sbjct:   73 MPMMDGYEFLHFLDKEVIDVPFIMMSEDRTVLSQEKAFKLGACDYWVKPLFEYKFLFENKH---LWSPMFRHHFHYRRIRKNIDSLEDDEISETSYNSSEFSSDGEVEADDDSPHKKE 187

[Close]

BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9T8H0|A0A0L9T8H0_PHAAN (Two-component response regulator OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0017670 PE=4 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.613e-36
Identity = 72/118 (61.02%), Postives = 85/118 (72.03%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKP-------FDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETS-DSSEFASDMEAEA-DDILHKKE 109
            MPMMDGYEF  FL KEVID+PF+MMS D T  S  KA +LGAC+Y  KP       F+N +   LWS MF+HH +  RI+K+IDSLED+EISETS +SSEF+SD E EA DD  HKKE
Sbjct:   73 MPMMDGYEFLHFLDKEVIDVPFIMMSEDRTVLSQEKAFKLGACDYWVKPLFEYKFLFENKH---LWSPMFRHHFHYRRIRKNIDSLEDDEISETSYNSSEFSSDGEVEADDDSPHKKE 187

[Close]

BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0LIH6|A0A8T0LIH6_PHAAN (Two-component response regulator OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0010680 PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.992e-31
Identity = 68/113 (60.18%), Postives = 75/113 (66.37%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFA----SDMEAEADDILHKKE 109
            MPMMDGYEF QFL KE IDIPFVMMS D T FSMTKA  LGA  Y  KPF+ND  L+LW+ + +H  Y  R+ K  D        ETSD SEFA    SD EAEADD LHKK+
Sbjct:   73 MPMMDGYEFLQFLNKEEIDIPFVMMSEDSTWFSMTKAFHLGAIYYFLKPFNNDKRLDLWAPLLRH--YYDRLNKKDD--------ETSDGSEFASDGESDGEAEADDTLHKKD 175

[Close]

BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UIM7|A0A1S3UIM7_VIGRR (Two-component response regulator ARR2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106765699 PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.014e-31
Identity = 65/114 (57.02%), Postives = 79/114 (69.30%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWL----NLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEA-DDILHKKE 109
            MP MDG+ F +FL KEVID+PF+MMS D +  S  KAL LGACNY  KPF    +L     L S M +HH++  RI+K+IDSLED+EISETS    ++SD EAEA DD  HKKE
Sbjct:   73 MPKMDGFGFLRFLNKEVIDVPFIMMSEDNSDLSQQKALTLGACNYWVKPFLQYTYLFERKRLCSPMMRHHVHFRRIRKNIDSLEDDEISETS----YSSDGEAEANDDSPHKKE 182

[Close]

BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TE94|A0A0L9TE94_PHAAN (Response regulatory domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan564s001600 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 6.244e-31
Identity = 68/113 (60.18%), Postives = 79/113 (69.91%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDM----EAEADDILHKKE 109
            MPMMDGYEF QFL KE IDIPFVMMS D T FSM+KA  LGA +Y  KPF+ND  L+LW+ + KH+ Y  R      +L+D+   ETSD SEFASD     EAEADD LHKK+
Sbjct:   58 MPMMDGYEFLQFLNKEEIDIPFVMMSEDSTWFSMSKAFHLGAIHYFLKPFNNDKRLDLWAPLLKHY-YDRR------NLKDD---ETSDGSEFASDRESDGEAEADDTLHKKD 160

[Close]

BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3QWS2|A0A0S3QWS2_PHAAN (Response regulatory domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G019000 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.258e-30
Identity = 65/114 (57.02%), Postives = 83/114 (72.81%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWL----NLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEA-DDILHKKE 109
            MP+MDG+ F +FLKKEVID+PF+MMS D T  S  KA +LGAC+Y  KPF    +L    +L S M +HH +  RI+K IDSLED+EIS+TS +SEF+S+ EAEA DD  H+KE
Sbjct:   73 MPIMDGFGFLRFLKKEVIDVPFIMMSEDDTDLSHKKAFKLGACDYWVKPFLEYAFLFERKHLCSPMMRHHFHFRRIRK-IDSLEDDEISDTSYNSEFSSEGEAEADDDTPHEKE 185

[Close]

BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9T894|A0A0L9T894_PHAAN (Putative two-component response regulator OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0017360 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.258e-30
Identity = 65/114 (57.02%), Postives = 83/114 (72.81%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWL----NLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEA-DDILHKKE 109
            MP+MDG+ F +FLKKEVID+PF+MMS D T  S  KA +LGAC+Y  KPF    +L    +L S M +HH +  RI+K IDSLED+EIS+TS +SEF+S+ EAEA DD  H+KE
Sbjct:   73 MPIMDGFGFLRFLKKEVIDVPFIMMSEDDTDLSHKKAFKLGACDYWVKPFLEYAFLFERKHLCSPMMRHHFHFRRIRK-IDSLEDDEISDTSYNSEFSSEGEAEADDDTPHEKE 185

[Close]

BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3QWP0|A0A0S3QWP0_PHAAN (Response regulatory domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G020200 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.683e-27
Identity = 57/115 (49.57%), Postives = 72/115 (62.61%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYW-----LNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEA-DDILHKKE 109
            MP++DGYEF + L  E ID+PF+MMS D T  S  KA +LGAC+Y  KPF  +Y       NLWS M +HH Y  RI  +IDSL+ +E  +    + + SD EAEA DD  HKKE
Sbjct:   71 MPLIDGYEFLEILDDEAIDVPFIMMSEDCTPLSQEKAFRLGACDYWIKPFFFEYESLFENRNLWSPMIRHHFYFRRIGINIDSLKGDEKGDEKGETGYNSDGEAEADDDTPHKKE 185

[Close]

BLAST of Va01G002640.1 vs. UniProtKB/Swiss-Prot
Match: Two-component (response regulator ORR26 OS=Oryza sativa subsp. japonica OX=39947 GN=RR26 PE=3 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 2.531e-9
Identity = 28/88 (31.82%), Postives = 51/88 (57.95%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETS 88
            MP MDG++  + +  E +D+P +MMS+D  +  + K +Q GAC+YL KP       N+W  +++  ++ ++  +  DS +D +I   S
Sbjct:   65 MPDMDGFKLLEHIGLE-MDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHVYRKKMHEVKEIEGNDSCDDLQILRNS 151

[Close]

BLAST of Va01G002640.1 vs. UniProtKB/Swiss-Prot
Match: Two-component (response regulator ARR14 OS=Arabidopsis thaliana OX=3702 GN=ARR14 PE=1 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 2.978e-9
Identity = 28/85 (32.94%), Postives = 47/85 (55.29%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEIS 85
            MP M+GY   Q +    +D+P +MMSVD  + ++   +  GAC+YL KP   +   N+W  + +    + +  +S  +LEDN+ S
Sbjct:   66 MPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNS 150

[Close]

BLAST of Va01G002640.1 vs. UniProtKB/Swiss-Prot
Match: Two-component (response regulator ORR21 OS=Oryza sativa subsp. japonica OX=39947 GN=RR21 PE=2 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 2.866e-8
Identity = 30/103 (29.13%), Postives = 55/103 (53.40%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISE-TSDSSEFASDMEAEAD 102
            MP MDG+   + +  E +D+P +MMS D  +  + K ++ GAC+YL KP   +   N+W  + +      +  +   SL+D + +  T++ +E+AS     A+
Sbjct:   71 MPDMDGFRLLELVGLE-MDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAE 172

[Close]

BLAST of Va01G002640.1 vs. UniProtKB/Swiss-Prot
Match: Two-component (response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN=RR21 PE=3 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 2.866e-8
Identity = 30/103 (29.13%), Postives = 55/103 (53.40%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISE-TSDSSEFASDMEAEAD 102
            MP MDG+   + +  E +D+P +MMS D  +  + K ++ GAC+YL KP   +   N+W  + +      +  +   SL+D + +  T++ +E+AS     A+
Sbjct:   71 MPDMDGFRLLELVGLE-MDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAE 172

[Close]

BLAST of Va01G002640.1 vs. Araport11
Match: | (Symbols: RR14, ARR14 | response regulator 14 | chr2:333320-334514 FORWARD LENGTH=317)

HSP 1 Score: 59.6918 bits (143), Expect = 1.456e-11
Identity = 28/87 (32.18%), Postives = 48/87 (55.17%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISET 87
            MP M+GY   Q +    +D+P +MMSVD  + ++   +  GAC+YL KP   +   N+W  + +    + +  +S  +LEDN+ S +
Sbjct:    1 MPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNSGS 87

[Close]

BLAST of Va01G002640.1 vs. Araport11
Match: | (Symbols: RR14, ARR14 | response regulator 14 | chr2:333041-334514 FORWARD LENGTH=382)

HSP 1 Score: 56.225 bits (134), Expect = 3.012e-10
Identity = 28/85 (32.94%), Postives = 47/85 (55.29%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEIS 85
            MP M+GY   Q +    +D+P +MMSVD  + ++   +  GAC+YL KP   +   N+W  + +    + +  +S  +LEDN+ S
Sbjct:   66 MPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNS 150

[Close]

BLAST of Va01G002640.1 vs. Araport11
Match: | (Symbols: RR14, ARR14 | response regulator 14 | chr2:333041-334514 FORWARD LENGTH=410)

HSP 1 Score: 55.8398 bits (133), Expect = 3.715e-10
Identity = 28/85 (32.94%), Postives = 47/85 (55.29%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEIS 85
            MP M+GY   Q +    +D+P +MMSVD  + ++   +  GAC+YL KP   +   N+W  + +    + +  +S  +LEDN+ S
Sbjct:   94 MPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNS 178

[Close]

BLAST of Va01G002640.1 vs. Araport11
Match: | (Symbols: ARR11 | response regulator 11 | chr1:25376994-25378905 REVERSE LENGTH=521)

HSP 1 Score: 48.521 bits (114), Expect = 1.188e-7
Identity = 24/71 (33.80%), Postives = 40/71 (56.34%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMR 71
            MP MDG++  + +  E +D+P +MMSVD  +  + K +Q GAC+YL KP        +W  + +  +  +R
Sbjct:   66 MPDMDGFKLLEHVGLE-LDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVR 135

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BLAST of Va01G002640.1 vs. Araport11
Match: | (Symbols: ARR11 | response regulator 11 | chr1:25376994-25378629 REVERSE LENGTH=456)

HSP 1 Score: 48.521 bits (114), Expect = 1.491e-7
Identity = 24/71 (33.80%), Postives = 40/71 (56.34%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMR 71
            MP MDG++  + +  E +D+P +MMSVD  +  + K +Q GAC+YL KP        +W  + +  +  +R
Sbjct:    1 MPDMDGFKLLEHVGLE-LDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVR 70

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BLAST of Va01G002640.1 vs. Araport11
Match: | (Symbols: PRR1, AtTOC1, TOC1, APRR1 | TIMING OF CAB EXPRESSION 1, PSEUDO-RESPONSE REGULATOR 1 | chr5:24675540-24678176 FORWARD LENGTH=618)

HSP 1 Score: 47.3654 bits (111), Expect = 3.455e-7
Identity = 30/106 (28.30%), Postives = 59/106 (55.66%), Query Frame = 0

Query:    1 MPMMDGYEFQQFLK--KEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEI-SETSDSSEFASDMEAEADD 103
            +PM  G +  +++   K++  IP +MMS       + K L+LGA +YL KP   +  LNLW+ M++    L   +K++ S + + + S+ SD +  ++++ ++  D
Sbjct:   74 LPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNSTNLFSDDTD 179

The following BLAST results are available for this feature:

BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
BLAST of Va01G002640.1 vs. UniProtKB/Swiss-Prot
BLAST of Va01G002640.1 vs. Araport11

BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
tr\|A0A0L9VSQ4\|A0A0L9VSQ4_PHAAN	9.080e-75	100.00	Response regulatory domain-containing protein OS=P...	[more]
tr\|A0A1S3UKV4\|A0A1S3UKV4_VIGRR	2.696e-45	67.89	Two-component response regulator ARR14-like OS=Vig...	[more]
tr\|A0A0S3QWL0\|A0A0S3QWL0_PHAAN	9.613e-36	61.02	Response regulatory domain-containing protein OS=V...	[more]
tr\|A0A0L9T8H0\|A0A0L9T8H0_PHAAN	9.613e-36	61.02	Two-component response regulator OS=Phaseolus angu...	[more]
tr\|A0A8T0LIH6\|A0A8T0LIH6_PHAAN	1.992e-31	60.18	Two-component response regulator OS=Phaseolus angu...	[more]
tr\|A0A1S3UIM7\|A0A1S3UIM7_VIGRR	2.014e-31	57.02	Two-component response regulator ARR2 OS=Vigna rad...	[more]
tr\|A0A0L9TE94\|A0A0L9TE94_PHAAN	6.244e-31	60.18	Response regulatory domain-containing protein OS=P...	[more]
tr\|A0A0S3QWS2\|A0A0S3QWS2_PHAAN	1.258e-30	57.02	Response regulatory domain-containing protein OS=V...	[more]
tr\|A0A0L9T894\|A0A0L9T894_PHAAN	1.258e-30	57.02	Putative two-component response regulator OS=Phase...	[more]
tr\|A0A0S3QWP0\|A0A0S3QWP0_PHAAN	7.683e-27	49.57	Response regulatory domain-containing protein OS=V...	[more]

BLAST of Va01G002640.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot)
Total hits: 4

Position :

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Match Name	E-value	Identity	Description
Two-component	2.531e-9	31.82	response regulator ORR26 OS=Oryza sativa subsp. ja...	[more]
Two-component	2.978e-9	32.94	response regulator ARR14 OS=Arabidopsis thaliana O...	[more]
Two-component	2.866e-8	29.13	response regulator ORR21 OS=Oryza sativa subsp. ja...	[more]
Two-component	2.866e-8	29.13	response regulator ORR21 OS=Oryza sativa subsp. in...	[more]

BLAST of Va01G002640.1 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11)
Total hits: 6

Position :

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Match Name	E-value	Identity	Description
\|	1.456e-11	32.18	Symbols: RR14, ARR14 \| response regulator 14 \| chr...	[more]
\|	3.012e-10	32.94	Symbols: RR14, ARR14 \| response regulator 14 \| chr...	[more]
\|	3.715e-10	32.94	Symbols: RR14, ARR14 \| response regulator 14 \| chr...	[more]
\|	1.188e-7	33.80	Symbols: ARR11 \| response regulator 11 \| chr1:2537...	[more]
\|	1.491e-7	33.80	Symbols: ARR11 \| response regulator 11 \| chr1:2537...	[more]
\|	3.455e-7	28.30	Symbols: PRR1, AtTOC1, TOC1, APRR1 \| TIMING OF CAB...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1
Date Performed: 2024-05-23

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.2300		coord: 1..108 e-value: 4.3E-11 score: 45.1
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 1..53 e-value: 7.1E-5 score: 34.3
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 1..63 score: 17.687538
IPR045279	Two-component response regulator ARR-like	PANTHER	PTHR43874	TWO-COMPONENT RESPONSE REGULATOR	coord: 1..88
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 1..79

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr1:1801826..1802272-
coding sequence from alignment at Chr1:1801826..1802272-

mRNA sequence

>Va01G002640.1_Jingnong6 ID=Va01G002640.1_Jingnong6; Name=Va01G002640.1; organism=Vigna angularis; type=mRNA; length=330bp
ATGCCAATGATGGATGGCTATGAATTCCAGCAATTTCTCAAGAAAGAAGT
AATTGATATTCCTTTCGTCATGATGTCTGTGGATTATACTTCGTTTTCCA
TGACCAAGGCTCTCCAACTTGGAGCTTGCAATTATTTACAGAAACCCTTC
GATAATGACTATTGGTTAAATTTGTGGTCAGCTATGTTCAAGCATCATAT
ATACCTGATGCGCATAAAGAAAAGTATTGATAGCTTGGAAGATAATGAGA
TAAGTGAGACAAGTGATAGTTCTGAATTTGCTTCTGATATGGAAGCCGAA
GCCGATGATATCCTCCACAAAAAAGAATAG

protein sequence of Va01G002640.1_Jingnong6

>Va01G002640.1_Jingnong6 ID=Va01G002640.1_Jingnong6; Name=Va01G002640.1_Jingnong6; organism=Vigna angularis; type=polypeptide; length=109bp
MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPF
DNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAE
ADDILHKKE

mRNA from alignment at Chr1:1801826..1802272-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Va01G002640.1_Jingnong6 ID=Va01G002640.1_Jingnong6; Name=Va01G002640.1; organism=Vigna angularis; type=mRNA; length=447bp; location=Sequence derived from: Chr1:1801826..1802272- (Vigna angularis
ATGCCAATGATGGATGGCTATGAATTCCAGCAATTTCTCAAGAAAGAAGT
AATTGATATTCCTTTCGTCAGTAAGTAACTAGTCTTTTACATTTGTACTC
GCGTTTTCAACTTTTGACTGTTTAACGTAACTAATCTTTTACATTTTTAC
TCAAGTTTTTAACTTTTGACTGATTAACCATCTGCAGTGATGTCTGTGGA
TTATACTTCGTTTTCCATGACCAAGGCTCTCCAACTTGGAGCTTGCAATT
ATTTACAGAAACCCTTCGATAATGACTATTGGTTAAATTTGTGGTCAGCT
ATGTTCAAGCATCATATATACCTGATGCGCATAAAGAAAAGTATTGATAG
CTTGGAAGATAATGAGATAAGTGAGACAAGTGATAGTTCTGAATTTGCTT
CTGATATGGAAGCCGAAGCCGATGATATCCTCCACAAAAAAGAATAG

Coding sequence (CDS) from alignment at Chr1:1801826..1802272-

>Va01G002640.1_Jingnong6 ID=Va01G002640.1_Jingnong6; Name=Va01G002640.1; organism=Vigna angularis; type=CDS; length=330bp; location=Sequence derived from: Chr1:1801826..1802272- (Vigna angularis
ATGCCAATGATGGATGGCTATGAATTCCAGCAATTTCTCAAGAAAGAAGT
AATTGATATTCCTTTCGTCATGATGTCTGTGGATTATACTTCGTTTTCCA
TGACCAAGGCTCTCCAACTTGGAGCTTGCAATTATTTACAGAAACCCTTC
GATAATGACTATTGGTTAAATTTGTGGTCAGCTATGTTCAAGCATCATAT
ATACCTGATGCGCATAAAGAAAAGTATTGATAGCTTGGAAGATAATGAGA
TAAGTGAGACAAGTGATAGTTCTGAATTTGCTTCTGATATGGAAGCCGAA
GCCGATGATATCCTCCACAAAAAAGAATAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR045279	ARR-like
IPR011006	CheY-like_superfamily

Vocabulary: **Biological Process**
Term	Definition
GO:0000160	phosphorelay signal transduction system
GO:0009736	cytokinin-activated signaling pathway

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