Va01G087620.3
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3R722|A0A0S3R722_PHAAN (RRM domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G440700 PE=4 SV=1) HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0 Identity = 282/300 (94.00%), Postives = 282/300 (94.00%), Query Frame = 0 Query: 1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR
Sbjct: 67 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQVEAQLESSTKQLDQLKKEVSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 366
BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0LAN4|A0A8T0LAN4_PHAAN (Glycine-rich RNA-binding protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0027100 PE=4 SV=1) HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0 Identity = 282/300 (94.00%), Postives = 282/300 (94.00%), Query Frame = 0 Query: 1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR
Sbjct: 67 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQVEAQLESSTKQLDQLKKEVSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 366
BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UHE4|A0A1S3UHE4_VIGRR (Zinc finger CCCH domain-containing protein 25 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106765376 PE=4 SV=1) HSP 1 Score: 532.332 bits (1370), Expect = 0.000e+0 Identity = 272/300 (90.67%), Postives = 279/300 (93.00%), Query Frame = 0 Query: 1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNR+NDWSRDRDRSRDRDQDRDRRFEH+HDYDEDRDPMLDNDWGREDDRVEN+QEHSRGDGGDVDRDHNLDFNADRKTDR+SD DRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ VS MEEGLEEKRVHVKELQKQSKKLEDAL+NAKKNTSYRQMQLIKLHKCFLQVKDYTERLK+SEKELQALID+VLLEIDGDGVG KDGQLTNGSLDAR
Sbjct: 67 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRNNDWSRDRDRSRDRDQDRDRRFEHMHDYDEDRDPMLDNDWGREDDRVENDQEHSRGDGGDVDRDHNLDFNADRKTDRSSDPDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQVEAQLESSTKQFDQLKKEVSQMEEGLEEKRVHVKELQKQSKKLEDALVNAKKNTSYRQMQLIKLHKCFLQVKDYTERLKTSEKELQALIDSVLLEIDGDGVGFKDGQLTNGSLDAR 366
BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KRM1|A0A4D6KRM1_VIGUN (RRM domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g1028 PE=4 SV=1) HSP 1 Score: 526.168 bits (1354), Expect = 0.000e+0 Identity = 274/302 (90.73%), Postives = 277/302 (91.72%), Query Frame = 0 Query: 1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRD--QDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRD QDRDRRFEH+HDYDEDRDPMLDNDW REDDRVENEQEHSRGDGGD DRDHNLDFNADRKTDRTSD DRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGA DDQ VS MEEGLEEKRVHVKELQKQSKKLEDALI+AKKNTSYRQMQLIKLHKCFLQVKDYTERLK+SEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR
Sbjct: 67 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDRDQDRDRRFEHMHDYDEDRDPMLDNDWSREDDRVENEQEHSRGDGGDEDRDHNLDFNADRKTDRTSDPDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGARDDQVEAQIESSTKQLDQLKKEVSQMEEGLEEKRVHVKELQKQSKKLEDALISAKKNTSYRQMQLIKLHKCFLQVKDYTERLKTSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 368
BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TSF5|A0A0L9TSF5_PHAAN (RRM domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g264000 PE=4 SV=1) HSP 1 Score: 489.96 bits (1260), Expect = 1.094e-172 Identity = 252/271 (92.99%), Postives = 252/271 (92.99%), Query Frame = 0 Query: 1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQA 253
MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQ
Sbjct: 67 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQVEAQLESSTKQLDQLKKEVSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQV 337
BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A371EVI4|A0A371EVI4_MUCPR (Cold-inducible RNA-binding protein B (Fragment) OS=Mucuna pruriens OX=157652 GN=cirbp-b PE=4 SV=1) HSP 1 Score: 421.779 bits (1083), Expect = 7.845e-145 Identity = 240/304 (78.95%), Postives = 263/304 (86.51%), Query Frame = 0 Query: 1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNS----GRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
MNGRTIDGRVVKVNGVR+RGGR+NFGRERYYYHNDERNGDWDRGRDR+R YDHDN+ RDGYRNRS+DWSRDRDRSRD DQDRDRRFEH+HDY++ R+PMLDNDW REDDRVENE+EHSRG GGDV+RDHNLD + +RK DRTSD D+SFDEDRKDQSRRNNDLNVTNQHSMDLSS+STG +DQ VS MEEGLEEKR+HVKELQKQSKKLEDALINAKKN+SYRQMQL+KLHKCFLQVKD+TERLK+ EKELQALIDT + EIDGD GLKDGQLTNG+LD R
Sbjct: 91 MNGRTIDGRVVKVNGVRARGGRTNFGRERYYYHNDERNGDWDRGRDRERIYDHDNNDRDGYRDGYRNRSSDWSRDRDRSRDHDQDRDRRFEHMHDYEQAREPMLDNDWSREDDRVENEKEHSRGYGGDVERDHNLDLDTNRKVDRTSDPDKSFDEDRKDQSRRNNDLNVTNQHSMDLSSDSTGTHNDQVEAQLERSTQQLDQLKKEVSQMEEGLEEKRLHVKELQKQSKKLEDALINAKKNSSYRQMQLMKLHKCFLQVKDFTERLKTGEKELQALIDTAMSEIDGD--GLKDGQLTNGNLDGR 392
BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445G5N2|A0A445G5N2_GLYSO (Cold-inducible RNA-binding protein B isoform A OS=Glycine soja OX=3848 GN=D0Y65_045591 PE=4 SV=1) HSP 1 Score: 405.216 bits (1040), Expect = 1.026e-138 Identity = 224/300 (74.67%), Postives = 248/300 (82.67%), Query Frame = 0 Query: 1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
MNGRTIDGRV+KVNGVR+RGGRSNFGRERYYY NDER GDWD GRDR+RDYDHDN+ RDGYRNRS+DW+RD D+SRDRDQDRDRRFEHIHDYD+ RD MLDN W E+DR+ENEQEHSRG DVDR+H++D N RK DRTSD DRSFDED+KDQSRRNNDLNV+NQHSMDLSS+S G +DQ VS MEEGLEEKR+HVKELQKQSKKLEDALINAKKN+SY QMQL+KLHKCFLQV D TE L+++EKELQALI T + EIDGD LKD QLTNGSLD R
Sbjct: 67 MNGRTIDGRVIKVNGVRARGGRSNFGRERYYYQNDERKGDWDCGRDRERDYDHDNNDRDGYRNRSSDWTRDCDKSRDRDQDRDRRFEHIHDYDQARDAMLDNVWNPEEDRIENEQEHSRGHDRDVDREHSIDLNIVRKMDRTSDPDRSFDEDKKDQSRRNNDLNVSNQHSMDLSSDSAGTHNDQVEAQLERSTQQLDQLKKEVSQMEEGLEEKRLHVKELQKQSKKLEDALINAKKNSSYHQMQLMKLHKCFLQVNDCTEGLRTTEKELQALIVTAMSEIDGD--ELKDRQLTNGSLDGR 364
BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|I1MUC9|I1MUC9_SOYBN (RRM domain-containing protein OS=Glycine max OX=3847 GN=100797556 PE=4 SV=1) HSP 1 Score: 405.216 bits (1040), Expect = 1.026e-138 Identity = 224/300 (74.67%), Postives = 248/300 (82.67%), Query Frame = 0 Query: 1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
MNGRTIDGRV+KVNGVR+RGGRSNFGRERYYY NDER GDWD GRDR+RDYDHDN+ RDGYRNRS+DW+RD D+SRDRDQDRDRRFEHIHDYD+ RD MLDN W E+DR+ENEQEHSRG DVDR+H++D N RK DRTSD DRSFDED+KDQSRRNNDLNV+NQHSMDLSS+S G +DQ VS MEEGLEEKR+HVKELQKQSKKLEDALINAKKN+SY QMQL+KLHKCFLQV D TE L+++EKELQALI T + EIDGD LKD QLTNGSLD R
Sbjct: 67 MNGRTIDGRVIKVNGVRARGGRSNFGRERYYYQNDERKGDWDCGRDRERDYDHDNNDRDGYRNRSSDWTRDCDKSRDRDQDRDRRFEHIHDYDQARDAMLDNVWNPEEDRIENEQEHSRGHDRDVDREHSIDLNIVRKMDRTSDPDRSFDEDKKDQSRRNNDLNVSNQHSMDLSSDSAGTHNDQVEAQLERSTQQLDQLKKEVSQMEEGLEEKRLHVKELQKQSKKLEDALINAKKNSSYHQMQLMKLHKCFLQVNDCTEGLRTTEKELQALIVTAMSEIDGD--ELKDRQLTNGSLDGR 364
BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445G5N7|A0A445G5N7_GLYSO (Cold-inducible RNA-binding protein B isoform B OS=Glycine soja OX=3848 GN=D0Y65_045591 PE=4 SV=1) HSP 1 Score: 403.29 bits (1035), Expect = 7.647e-138 Identity = 224/305 (73.44%), Postives = 248/305 (81.31%), Query Frame = 0 Query: 1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDD-----------------------QVSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
MNGRTIDGRV+KVNGVR+RGGRSNFGRERYYY NDER GDWD GRDR+RDYDHDN+ RDGYRNRS+DW+RD D+SRDRDQDRDRRFEHIHDYD+ RD MLDN W E+DR+ENEQEHSRG DVDR+H++D N RK DRTSD DRSFDED+KDQSRRNNDLNV+NQHSMDLSS+S G +D QVS MEEGLEEKR+HVKELQKQSKKLEDALINAKKN+SY QMQL+KLHKCFLQV D TE L+++EKELQALI T + EIDGD LKD QLTNGSLD R
Sbjct: 67 MNGRTIDGRVIKVNGVRARGGRSNFGRERYYYQNDERKGDWDCGRDRERDYDHDNNDRDGYRNRSSDWTRDCDKSRDRDQDRDRRFEHIHDYDQARDAMLDNVWNPEEDRIENEQEHSRGHDRDVDREHSIDLNIVRKMDRTSDPDRSFDEDKKDQSRRNNDLNVSNQHSMDLSSDSAGTHNDQVEAQLERSTQQLDQLKKEFLTCQVSQMEEGLEEKRLHVKELQKQSKKLEDALINAKKNSSYHQMQLMKLHKCFLQVNDCTEGLRTTEKELQALIVTAMSEIDGD--ELKDRQLTNGSLDGR 369
BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|I1K1C6|I1K1C6_SOYBN (RRM domain-containing protein OS=Glycine max OX=3847 GN=100816804 PE=4 SV=1) HSP 1 Score: 401.749 bits (1031), Expect = 1.435e-137 Identity = 238/282 (84.40%), Postives = 257/282 (91.13%), Query Frame = 0 Query: 1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQVSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
MNGRTIDGRVVKVNGVR+RGGRSNFGRERYYYHNDERNGDWDR RDRDRDYDHD++ RDGYRNRS+DW RDRDRSRDRDQDRDRRFEH+HDYD+ R+ ML+NDW REDDRVENEQEHSRG GGDVDRDHN+D N DRK DRTSD DRSF EDRKDQSRRNNDLNVTNQH MDLSS+S G ++QVS MEEGLEEKR+HVKELQKQSKKLEDA+INAKKN+SYRQMQL+KLHK FLQVKD TE+LK+SEKELQALIDT + EID D GLKDGQLTNGSLD R
Sbjct: 67 MNGRTIDGRVVKVNGVRTRGGRSNFGRERYYYHNDERNGDWDRSRDRDRDYDHDSNDRDGYRNRSSDWGRDRDRSRDRDQDRDRRFEHMHDYDQAREAMLENDWIREDDRVENEQEHSRGHGGDVDRDHNIDLNVDRKMDRTSDPDRSFGEDRKDQSRRNNDLNVTNQHIMDLSSDSAGTHNEQVSQMEEGLEEKRLHVKELQKQSKKLEDAVINAKKNSSYRQMQLMKLHKGFLQVKDCTEKLKTSEKELQALIDTAMSEIDCD--GLKDGQLTNGSLDGR 346
BLAST of Va01G087620.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:6744029-6746133 FORWARD LENGTH=337) HSP 1 Score: 115.931 bits (289), Expect = 4.991e-30 Identity = 102/298 (34.23%), Postives = 151/298 (50.67%), Query Frame = 0 Query: 1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQD-----RDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTG----------------ADDDQVSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNG 277
M+G++I GR V+VN V +RGGR N G R H G WDR DR D +++ R+R +D SR+RDRS+DR +D ++R +EH HD++ D + + G ++ + ++ RGD VD ++ S E R +++R + + D S S+G A D+V +MEE LE K V ELQK+SK+LED LIN KK S R+ +L KLHK + +V++ T+ LK E+ELQ L+++ E GV D L +G
Sbjct: 67 MDGKSIGGRAVRVNDVTTRGGRMNPGPGRLQPH-----GGWDRSPDRRSDGNYE-------RDRYSDRSRERDRSQDRRKDHRYIEKERAYEHSHDFERRNDHDMVDRNGYKERVFDGDEGDWRGDRSYVDNGRGINGT-------------SAHEGRSQETKREDSTILDGGRGRDHFSNSSGDHQVKEDLEALIKMREALRDEVMVMEERLEVKEVVCSELQKKSKRLEDLLINEKKLVSQRRKELAKLHKSYSRVRECTDNLKDCEQELQLLVNSAARE----GVAGADEGLGHG 335
BLAST of Va01G087620.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:6744626-6746133 FORWARD LENGTH=249) HSP 1 Score: 90.1225 bits (222), Expect = 4.376e-21 Identity = 85/261 (32.57%), Postives = 130/261 (49.81%), Query Frame = 0 Query: 38 NGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQD-----RDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTG----------------ADDDQVSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNG 277
+G WDR DR D +++ R+R +D SR+RDRS+DR +D ++R +EH HD++ D + + G ++ + ++ RGD VD ++ S E R +++R + + D S S+G A D+V +MEE LE K V ELQK+SK+LED LIN KK S R+ +L KLHK + +V++ T+ LK E+ELQ L+++ E GV D L +G
Sbjct: 11 HGGWDRSPDRRSDGNYE-------RDRYSDRSRERDRSQDRRKDHRYIEKERAYEHSHDFERRNDHDMVDRNGYKERVFDGDEGDWRGDRSYVDNGRGINGT-------------SAHEGRSQETKREDSTILDGGRGRDHFSNSSGDHQVKEDLEALIKMREALRDEVMVMEERLEVKEVVCSELQKKSKRLEDLLINEKKLVSQRRKELAKLHKSYSRVRECTDNLKDCEQELQLLVNSAARE----GVAGADEGLGHG 247 The following BLAST results are available for this feature:
BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Va01G087620.3 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11) Total hits: 2 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Va01G087620.3_Jingnong6 ID=Va01G087620.3_Jingnong6; Name=Va01G087620.3; organism=Vigna angularis; type=mRNA; length=849bpback to top protein sequence of Va01G087620.3_Jingnong6 >Va01G087620.3_Jingnong6 ID=Va01G087620.3_Jingnong6; Name=Va01G087620.3_Jingnong6; organism=Vigna angularis; type=polypeptide; length=282bpback to top mRNA from alignment at Chr1:57366185..57369864+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Va01G087620.3_Jingnong6 ID=Va01G087620.3_Jingnong6; Name=Va01G087620.3; organism=Vigna angularis; type=mRNA; length=3680bp; location=Sequence derived from: Chr1:57366185..57369864+ (Vigna angularisback to top Coding sequence (CDS) from alignment at Chr1:57366185..57369864+ >Va01G087620.3_Jingnong6 ID=Va01G087620.3_Jingnong6; Name=Va01G087620.3; organism=Vigna angularis; type=CDS; length=849bp; location=Sequence derived from: Chr1:57366185..57369864+ (Vigna angularisback to top |