Va02G048420.1

Transcript Overview
NameVa02G048420.1
Unique NameVa02G048420.1_Jingnong6
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length360
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr2chromosomeChr2:29292729..29294856 -Vigna angularis cv. Jingnong6 genome v1.7.1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjavjR246Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjL0172Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anavjL0176Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjcanR336Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaR383Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
avjccR0670Cajanus cajan Asha genome v1.0Cajanus cajan
anavjL0962Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjpsR355Pisum sativum Cameor genome v1aPisum sativum
avjpsR383Pisum sativum Cameor genome v1aPisum sativum
avjpvR376Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
avjpvR415Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
avjpvR421Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
avjvfhR398Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjvfhR436Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjvrvR288Vigna radiata cv. VC1973A genome v6.0Vigna radiata
avjvrvR307Vigna radiata cv. VC1973A genome v6.0Vigna radiata
avjvuR287Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvuR317Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvssR401Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvssR442Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjcarR329Cicer arietinum
avjcarR367Cicer arietinum
avjvumR296Vigna umbellata FF25 genome v1.0Vigna umbellata
avjccaR389Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjvumR339Vigna umbellata FF25 genome v1.0Vigna umbellata
avjvvaR363Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvasR321Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvasR340Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvstR326Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvstR352Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvunR234Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
avjvunR263Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
avjpvfR365Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
avjpvfR412Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
avjpvfR415Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vigst.08G176100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
PvulFLAVERTChr07.1001374Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_004497478.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Phvul.007G219000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.3g041960.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
XM_058915175.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
jg1369.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat6g074040.1Pisum sativum Cameor genome v1aPisum sativum
Vigun07g072900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun07g072900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vum_08G01591.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_17164Cicer arietinum CDC Frontier genome v1.0Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigan.08G201800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Va02G048420Va02G048420_Jingnong6Vigna angularisgene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va02G048420.1:three_prime_UTR_1_Jingnong6Va02G048420.1:three_prime_UTR_1_Jingnong6Vigna angularisthree_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va02G048420.1:exon_1_Jingnong6Va02G048420.1:exon_1_Jingnong6Vigna angularisexon
Va02G048420.1:exon_2_Jingnong6Va02G048420.1:exon_2_Jingnong6Vigna angularisexon
Va02G048420.1:exon_3_Jingnong6Va02G048420.1:exon_3_Jingnong6Vigna angularisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va02G048420.1_Jingnong6-cdsVa02G048420.1_Jingnong6-cds-Chr2_Jingnong6:29292960..29293062Vigna angularisCDS
Va02G048420.1_Jingnong6-cdsVa02G048420.1_Jingnong6-cds-Chr2_Jingnong6:29293806..29293868Vigna angularisCDS
Va02G048420.1_Jingnong6-cdsVa02G048420.1_Jingnong6-cds-Chr2_Jingnong6:29294481..29294674Vigna angularisCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va02G048420.1:five_prime_UTR_1_Jingnong6Va02G048420.1:five_prime_UTR_1_Jingnong6Vigna angularisfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Va02G048420.1_Jingnong6Va02G048420.1_Jingnong6Vigna angularispolypeptide
Va02G048420.1_Jingnong6Va02G048420.1_Jingnong6-proteinVigna angularispolypeptide


Homology
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SR57|A0A0S3SR57_PHAAN (Matrin-type domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G201800 PE=4 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 5.864e-84
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 
Query:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 119
            MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMSM
Sbjct:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 119
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TXC7|A0A0L9TXC7_PHAAN (Matrin-type domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0237580 PE=4 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 5.864e-84
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 
Query:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 119
            MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMSM
Sbjct:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 119
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V2W3|A0A1S3V2W3_VIGRR (Zinc finger protein 593 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771248 PE=4 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.788e-81
Identity = 116/119 (97.48%), Postives = 117/119 (98.32%), Query Frame = 0 
Query:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 119
            MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQ+YCPHCDRYFSN TVRDEHFKTKRHKKRVK MMGPAPHTQLDAELAAGMGMPDNGPKLMSM
Sbjct:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQHYCPHCDRYFSNTTVRDEHFKTKRHKKRVKQMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 119
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6N1P7|A0A4D6N1P7_VIGUN (Bud site selection protein 20 OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g1014 PE=4 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 8.268e-79
Identity = 112/119 (94.12%), Postives = 116/119 (97.48%), Query Frame = 0 
Query:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 119
            MGGKCPHR+VKKRRYSHKTARRTKFELKGDDMVYAQ+NKPDEE TPLPVDEDLPGMGQYYCPHCDRYFSN TVRDEHFKTKRH++RVK MMGPAPHTQLDAELAAGMGMPDNGPKLMSM
Sbjct:    1 MGGKCPHRSVKKRRYSHKTARRTKFELKGDDMVYAQVNKPDEEKTPLPVDEDLPGMGQYYCPHCDRYFSNKTVRDEHFKTKRHRRRVKQMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 119
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/TrEMBL
Match: tr|V7BH85|V7BH85_PHAVU (Matrin-type domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G219000g PE=4 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.546e-78
Identity = 111/119 (93.28%), Postives = 116/119 (97.48%), Query Frame = 0 
Query:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 119
            MGGKCPHR+VKKRRYSHKTARRTKFELKGDDMVYAQLNKPDE+ TPLPVDEDLPGMGQYYCPHCDRYFSN+TVRDEHFKTKRH+KRVK MMGPAPHTQLDA+LA GMGMPDNGPKLMSM
Sbjct:    1 MGGKCPHRSVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEDKTPLPVDEDLPGMGQYYCPHCDRYFSNVTVRDEHFKTKRHRKRVKQMMGPAPHTQLDADLAGGMGMPDNGPKLMSM 119
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445HFX3|A0A445HFX3_GLYSO (Zinc finger protein 593 OS=Glycine soja OX=3848 GN=D0Y65_036672 PE=4 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 3.492e-77
Identity = 109/119 (91.60%), Postives = 114/119 (95.80%), Query Frame = 0 
Query:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 119
            MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEE  PLP+DEDLPGMGQYYC HCDRYFSN+ VRDEHFKTKRHKKR+K MMGPAPHTQLDA++AAGMGMPDNGPKLMSM
Sbjct:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEERAPLPLDEDLPGMGQYYCLHCDRYFSNVAVRDEHFKTKRHKKRIKQMMGPAPHTQLDADVAAGMGMPDNGPKLMSM 119
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/TrEMBL
Match: tr|C6SVQ9|C6SVQ9_SOYBN (C2H2-type domain-containing protein OS=Glycine max OX=3847 GN=100499707 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 3.492e-77
Identity = 109/119 (91.60%), Postives = 114/119 (95.80%), Query Frame = 0 
Query:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 119
            MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEE  PLP+DEDLPGMGQYYC HCDRYFSN+ VRDEHFKTKRHKKR+K MMGPAPHTQLDA++AAGMGMPDNGPKLMSM
Sbjct:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEERAPLPLDEDLPGMGQYYCLHCDRYFSNVAVRDEHFKTKRHKKRIKQMMGPAPHTQLDADVAAGMGMPDNGPKLMSM 119
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445IIH0|A0A445IIH0_GLYSO (Zinc finger protein 593 OS=Glycine soja OX=3848 GN=D0Y65_026097 PE=4 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 3.897e-77
Identity = 110/119 (92.44%), Postives = 115/119 (96.64%), Query Frame = 0 
Query:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 119
            MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPD+E  PLPVDEDLPGMGQYYC HCDRYF+NITVRDEHFKTKRHKKR+K MMGPAPHTQLDA+LA+GMGMPDNGPKLMSM
Sbjct:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDQERPPLPVDEDLPGMGQYYCLHCDRYFANITVRDEHFKTKRHKKRIKQMMGPAPHTQLDADLASGMGMPDNGPKLMSM 119
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/TrEMBL
Match: tr|C6T4X9|C6T4X9_SOYBN (C2H2-type domain-containing protein OS=Glycine max OX=3847 GN=100527632 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 3.897e-77
Identity = 110/119 (92.44%), Postives = 115/119 (96.64%), Query Frame = 0 
Query:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 119
            MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPD+E  PLPVDEDLPGMGQYYC HCDRYF+NITVRDEHFKTKRHKKR+K MMGPAPHTQLDA+LA+GMGMPDNGPKLMSM
Sbjct:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDQERPPLPVDEDLPGMGQYYCLHCDRYFANITVRDEHFKTKRHKKRIKQMMGPAPHTQLDADLASGMGMPDNGPKLMSM 119
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371GQC6|A0A371GQC6_MUCPR (Zinc finger protein OS=Mucuna pruriens OX=157652 GN=znf593 PE=4 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 2.491e-76
Identity = 108/119 (90.76%), Postives = 116/119 (97.48%), Query Frame = 0 
Query:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 119
            MGGKCPHR+VKKRRYSHKTARRTKFE+KGDDMVY+QLNKPDEE TPLP+D+DLPGMGQYYC HCDRYFSN++VRDEHFKTKRHKKRVK MMGPAPHTQLDA+LAAGMGMPDNGPKLMSM
Sbjct:    1 MGGKCPHRHVKKRRYSHKTARRTKFEMKGDDMVYSQLNKPDEEKTPLPLDDDLPGMGQYYCLHCDRYFSNVSVRDEHFKTKRHKKRVKQMMGPAPHTQLDADLAAGMGMPDNGPKLMSM 119
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/Swiss-Prot
Match: Zinc (finger protein 593 OS=Xenopus tropicalis OX=8364 GN=znf593 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.490e-15
Identity = 47/117 (40.17%), Postives = 69/117 (58.97%), Query Frame = 0 
Query:    7 HRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPL--PVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMG--MPDNGPKLMSM 119
            H++ KK+  S     +TK  +K  D ++  + KP+     L   +D  LPG  Q+YC HC RYF ++    EHFKTK HK+R+K  +   P+TQ +AE AAGMG  +P   PKL+++
Sbjct:   10 HKSDKKKNIS--KLWKTKRRVKDLDQIHHDM-KPENAKLLLNQEIDYQLPGNAQHYCLHCSRYFVDLKTLKEHFKTKVHKRRLK-QLREEPYTQEEAERAAGMGSYIP---PKLINV 119
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/Swiss-Prot
Match: Zinc (finger protein bud20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bud20 PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.288e-13
Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 0 
Query:   22 RTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMP 110
            RT+   +  D ++  L +  E+   LP+D DLPG+GQ+YC  C RYF +      H K K HK+R+K  +   P+TQ +AE A  +G P
Sbjct:   20 RTRVYGRDLDQIHNDLTES-EKFDKLPIDPDLPGLGQHYCIECARYFDSSQALLVHKKGKVHKRRLK-NLREEPYTQEEAEAAVNIGQP 106
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/Swiss-Prot
Match: Bud (site selection protein 20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BUD20 PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 6.729e-13
Identity = 38/101 (37.62%), Postives = 57/101 (56.44%), Query Frame = 0 
Query:   14 RYS---HKTARRTKFELKGDDMVYAQLNKPD--EEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGM 109
            RYS   +KT RRT+      D++Y  L+  +  +++   P+DE  PG+GQ+YC HC +Y         H K K HK+RVK + G  P+TQ  ++ AAG  +
Sbjct:    3 RYSVKRYKTKRRTR----DLDLIYNDLSTKESVQKLLNQPLDETKPGLGQHYCIHCAKYMETAIALKTHLKGKVHKRRVKELRG-VPYTQEVSDAAAGYNL 98
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/Swiss-Prot
Match: Zinc (finger protein 593 homolog OS=Caenorhabditis elegans OX=6239 GN=Y56A3A.18 PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 5.441e-12
Identity = 41/106 (38.68%), Postives = 57/106 (53.77%), Query Frame = 0 
Query:    6 PHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPL--PVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGM 109
            P    +K   S+KT +R   +L   D ++  L KP++    L   +D DLPG GQ+YC  C+R+F +   R  H KTK HK RVK +    P+TQ +A  A G G 
Sbjct:    2 PSGGQRKHTISNKTRKRPGKDL---DQIHEDL-KPEKAAKLLQQEIDYDLPGNGQFYCIECERHFVDEKTRQLHRKTKLHKNRVKTLK-EVPYTQAEANAAGGSGF 102
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/Swiss-Prot
Match: Zinc (finger protein 593 homolog OS=Drosophila melanogaster OX=7227 GN=CG3224 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 6.605e-11
Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 0 
Query:   43 EITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMG 108
            E+    VD D PG  Q+YC HC +YF + T    HF+TK HK+R+K  +   P++  +AE AAG G
Sbjct:   43 ELINQNVDLDKPGFAQFYCVHCAKYFIDDTAMQAHFRTKVHKRRLK-ALEIEPYSIEEAERAAGRG 107
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/Swiss-Prot
Match: Zinc (finger protein 593 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0275351 PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.352e-10
Identity = 38/117 (32.48%), Postives = 58/117 (49.57%), Query Frame = 0 
Query:    1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLN-KPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKL 116
            MG    H     ++  +K AR TK   K  D ++ ++  +  ++ +   VD DLPGMGQ YC HC ++F        H K K HK RVK  +   P++  ++++       DNG KL
Sbjct:    1 MGRYSGHGGTHTKKKQYKRARSTKNRAKDIDQIFDEIQPETIDKFSKFEVDPDLPGMGQNYCIHCSKHFVTNEDLQSHIKGKPHKIRVK-ELKTKPYSLAESQIPV-----DNGVKL 111
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/Swiss-Prot
Match: Zinc (finger protein 593 OS=Homo sapiens OX=9606 GN=ZNF593 PE=1 SV=2)

HSP 1 Score: 57.7658 bits (138), Expect = 1.426e-10
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 0 
Query:   16 SHKTARRTKFELKGDDM--VYAQLNKPDEEITPLP-----VDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMG 108
            +H  AR+ K + +  D+  ++ +L +P     P P      D DLPG G + C  C RYF + T    HF++K HKKR+K  +   P++Q +AE AAGMG
Sbjct:   12 AHSLARQMKAKRRRPDLDEIHREL-RPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLK-QLSVEPYSQEEAERAAGMG 109
[Close]
BLAST of Va02G048420.1 vs. UniProtKB/Swiss-Prot
Match: Zinc (finger protein 593 OS=Mus musculus OX=10090 GN=Znf593 PE=1 SV=2)

HSP 1 Score: 54.6842 bits (130), Expect = 1.992e-9
Identity = 37/102 (36.27%), Postives = 56/102 (54.90%), Query Frame = 0 
Query:   16 SHKTARRTKFELKGDDM--VYAQLN-------KPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMG 108
            +H  AR+ K + +  D+  ++ +L        KP+ +  P   D DLPG G + C  C RYF +      HF++K HKKR+K  +   P++Q +AE AAGMG
Sbjct:   12 AHSLARQMKAKKRRPDLDEIHRELRPQGLPRPKPEPDAEP---DPDLPGGGLHRCLACARYFIDSANLKTHFRSKDHKKRLK-QLSVEPYSQEEAERAAGMG 109
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BLAST of Va02G048420.1 vs. UniProtKB/Swiss-Prot
Match: Zinc (finger C2H2 protein ECU02_0310 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=ECU02_0310 PE=3 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 2.094e-8
Identity = 34/97 (35.05%), Postives = 50/97 (51.55%), Query Frame = 0 
Query:   11 KKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGM 107
            KKRR +    R  +  L G   +  Q+ +  E    +  D +LPG G +YC  CDR+F    V  EH ++  H++R K +   A H+Q DAE A G+
Sbjct:    9 KKRRSNKNRLRIKRARLFGPKDI-DQVKEDIESQKKIEYDPELPGGGHFYCCECDRHFITEKVLMEHKRSNPHRRRAKEVREVA-HSQRDAEWAVGL 103
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BLAST of Va02G048420.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:15510002-15511347 REVERSE LENGTH=198)

HSP 1 Score: 196.052 bits (497), Expect = 4.416e-65
Identity = 89/116 (76.72%), Postives = 103/116 (88.79%), Query Frame = 0 
Query:    3 GKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMS 118
            G+CP R VKKRR SHKTARR KFE+KGDD+VY +L KP+ EI PL +DEDLPGMGQ+YC HCDRYFSN++VRD+HFKTK+HKKRV +MMG APH+QLDA+LA GMGMPDNGPKLMS
Sbjct:    2 GRCPTRKVKKRRLSHKTARRDKFEVKGDDLVYTELRKPETEIKPLQLDEDLPGMGQFYCLHCDRYFSNVSVRDDHFKTKKHKKRVNMMMGQAPHSQLDADLAGGMGMPDNGPKLMS 117

HSP 2 Score: 89.7373 bits (221), Expect = 2.324e-23
Identity = 54/88 (61.36%), Postives = 65/88 (73.86%), Query Frame = 0 
Query:   31 DMVYAQLNKPDEEITPLPVDEDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLDAELAAGMGMPDNGPKLMS 118
            ++V+ +L KP+ E        DLPGMGQ+ C  C R FSN +V D HFKTK+HKKRVK +  PAPH+QLDA+LA GMGMPDNGPKLMS
Sbjct:  118 NLVFTELRKPETE--------DLPGMGQFNCLLCHRNFSNASVMDYHFKTKKHKKRVKKIERPAPHSQLDADLAGGMGMPDNGPKLMS 197
The following BLAST results are available for this feature:
BLAST of Va02G048420.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3SR57|A0A0S3SR57_PHAAN5.864e-84100.00Matrin-type domain-containing protein OS=Vigna ang... [more]
tr|A0A0L9TXC7|A0A0L9TXC7_PHAAN5.864e-84100.00Matrin-type domain-containing protein OS=Phaseolus... [more]
tr|A0A1S3V2W3|A0A1S3V2W3_VIGRR1.788e-8197.48Zinc finger protein 593 OS=Vigna radiata var. radi... [more]
tr|A0A4D6N1P7|A0A4D6N1P7_VIGUN8.268e-7994.12Bud site selection protein 20 OS=Vigna unguiculata... [more]
tr|V7BH85|V7BH85_PHAVU1.546e-7893.28Matrin-type domain-containing protein OS=Phaseolus... [more]
tr|A0A445HFX3|A0A445HFX3_GLYSO3.492e-7791.60Zinc finger protein 593 OS=Glycine soja OX=3848 GN... [more]
tr|C6SVQ9|C6SVQ9_SOYBN3.492e-7791.60C2H2-type domain-containing protein OS=Glycine max... [more]
tr|A0A445IIH0|A0A445IIH0_GLYSO3.897e-7792.44Zinc finger protein 593 OS=Glycine soja OX=3848 GN... [more]
tr|C6T4X9|C6T4X9_SOYBN3.897e-7792.44C2H2-type domain-containing protein OS=Glycine max... [more]
tr|A0A371GQC6|A0A371GQC6_MUCPR2.491e-7690.76Zinc finger protein OS=Mucuna pruriens OX=157652 G... [more]
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BLAST of Va02G048420.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot)
Total hits: 9
Match NameE-valueIdentityDescription
Zinc1.490e-1540.17finger protein 593 OS=Xenopus tropicalis OX=8364 G... [more]
Zinc5.288e-1339.33finger protein bud20 OS=Schizosaccharomyces pombe ... [more]
Bud6.729e-1337.62site selection protein 20 OS=Saccharomyces cerevis... [more]
Zinc5.441e-1238.68finger protein 593 homolog OS=Caenorhabditis elega... [more]
Zinc6.605e-1143.94finger protein 593 homolog OS=Drosophila melanogas... [more]
Zinc1.352e-1032.48finger protein 593 homolog OS=Dictyostelium discoi... [more]
Zinc1.426e-1038.00finger protein 593 OS=Homo sapiens OX=9606 GN=ZNF5... [more]
Zinc1.992e-936.27finger protein 593 OS=Mus musculus OX=10090 GN=Znf... [more]
Zinc2.094e-835.05finger C2H2 protein ECU02_0310 OS=Encephalitozoon ... [more]
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BLAST of Va02G048420.1 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
|4.416e-6576.72Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1
Date Performed: 2024-05-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 58..84
e-value: 2.1E-6
score: 39.0
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 46..109
e-value: 1.0E-23
score: 85.1
NoneNo IPR availablePANTHERPTHR47444EXPRESSED PROTEINcoord: 1..119
IPR000690Matrin/U1-C, C2H2-type zinc fingerPROSITEPS50171ZF_MATRINcoord: 59..89
score: 8.504526
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 46..110

Sequences
The following sequences are available for this feature:

mRNA sequence

>Va02G048420.1_Jingnong6 ID=Va02G048420.1_Jingnong6; Name=Va02G048420.1; organism=Vigna angularis; type=mRNA; length=360bp
ATGGGAGGAAAATGTCCGCACCGGAACGTGAAGAAAAGAAGATATTCTCA
CAAGACAGCACGCCGAACCAAATTTGAGTTGAAAGGCGACGATATGGTTT
ACGCGCAGCTAAACAAACCCGATGAAGAGATAACCCCTTTACCCGTAGAC
GAAGATTTGCCTGGGATGGGACAGTACTATTGCCCTCACTGCGATCGGTA
CTTTTCCAATATAACTGTGAGGGATGAACACTTTAAGACCAAACGACACA
AGAAGCGTGTAAAAATAATGATGGGTCCTGCACCACATACTCAACTTGAT
GCCGAATTAGCTGCAGGGATGGGTATGCCAGACAATGGACCAAAGCTGAT
GTCTATGTAA
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protein sequence of Va02G048420.1_Jingnong6

>Va02G048420.1_Jingnong6 ID=Va02G048420.1_Jingnong6; Name=Va02G048420.1_Jingnong6; organism=Vigna angularis; type=polypeptide; length=119bp
MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVD
EDLPGMGQYYCPHCDRYFSNITVRDEHFKTKRHKKRVKIMMGPAPHTQLD
AELAAGMGMPDNGPKLMSM
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mRNA from alignment at Chr2:29292729..29294856-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Va02G048420.1_Jingnong6 ID=Va02G048420.1_Jingnong6; Name=Va02G048420.1; organism=Vigna angularis; type=mRNA; length=2128bp; location=Sequence derived from: Chr2:29292729..29294856- (Vigna angularis
GCCCATTTTGACACTCGTGTTTCTCATACATCAGTTGATTTTGTGTTAAG
AAGAGAGAGATTTGATTTGAGGCGCCGTCGTTTCACTCTCCACCATCATC
TTCAGAAGAAAAACCCTAACAACAAGTTGCAAGGGAAGTGGAATCAGAGC
TGTGAAACCCTAACTGTTGTGAAACGCTAATAATGGGAGGAAAATGTCCG
CACCGGAACGTGAAGAAAAGAAGATATTCTCACAAGACAGCACGCCGAAC
CAAATTTGAGTTGAAAGGCGACGATATGGTTTACGCGCAGCTAAACAAAC
CCGATGAAGAGATAACCCCTTTACCCGTAGACGAAGATTTGCCTGGGATG
GGACAGTACTATTGCCCTCACTGCGAGTAATTTCTTTTTCTTCCTCCTTC
TTTGTGTGCTTCTTTTTATCAATATGATTTACGTTTATATATTTATTGAT
CTTTTAACATGGGATTGAAAAGTTTGGTGTAGTAGAACACTAAGATGCCA
AGTTTAGGTTATAGGAATAGAAGATAAAAAGTGTACATGTGTAAGAAAAT
AGAGGATAGATTCGAGAGAATGGATAGATTTTAAAAACTTTTCAGTTTAT
GGTTTTAAGAACTGATTTCTAGAACTTTTTAATTCTGATTATTCAATAAC
CTGATAAGTAGAGTTCCGTGATAATGCTGCATTATTGGAGTGGGTTTATA
GTTAGCATCGCTAGCATTTTTCTTCTTGCTTTTTCAATCTTTTAACTGAG
GTGGGTTTTTGACTTTCTCAGACCTATTCAATCCCATCCCACTTCTCCGT
TTTCGAGCAACGTGGGAGAACAAATTTTTATTTGCTTTTCTTAATTCTTA
ATTGCTTATTCCGTTTTGTTATGATTTAAGGAATATGGATACTGAGGTAT
TCGTCTCCAATCTCCCTTTTTTTTTTTGCTTTTTTGGTTGTTGGTTGGTT
TCATGATTAGATTGAGTAATTGATTTTTATTTGTGCAGTCGGTACTTTTC
CAATATAACTGTGAGGGATGAACACTTTAAGACCAAACGACACAAGAAGC
GGTATGCTACTTTTTTTTATGTTTTGTTTTTGAATCTATGCTATATTCTC
CCCTTATTTATATTGCTGAAGATTGGTTAAATTTATAGAATCGCTCGTGT
TTTGCTGTACTATTGTGTTTCATGTATGAGCTTTCAGATATGTGAACATA
TAAAGCTGATGAACACTATGAAAAGAACAAGTCTTACTTTTTAATAATAA
TTGAGTGTAGTTGAACATAATACGAGTAATTCAAGCTTGTTTAGATAAAA
GATACTGCATTTAGAACTTTAATAAAAATAAAATTGATCCTCATCTAGTC
TCTGTTTTAAAAGGAGTGATCAAATTAGATGACTCGGAATAGATTATGGA
TGGCAGATAGTTAACGAAGTCATGAATGTTGAATAGCTTGATTAATTACT
TACCTCAGTCCCAATTATTACCTTAGCTTGTCCTTTCCCTGCTTATTATA
CTCATAAATTATATTAATATAAGGTGTAAATTCGTATTGCATGTCTATTT
ATTTTGGAAAAGTAAAGACGTATATGTACACACACACACACATTTATATA
AATGAAGTTAGGTGGCTCTATTAACTAATGAGGAATTACTTATCATCAAA
TTGTTCTATACTTGTTCAAACCCTTGACTTCACCATCACACATTAAAGGC
TGTTACATGTATGTCAATTGAACTGCAAGCACACTGGCATTTACATTTTA
TAGTAGAATGATATTGCTTCTAATATTACAGTTTCATTTTGTAGTGTAAA
AATAATGATGGGTCCTGCACCACATACTCAACTTGATGCCGAATTAGCTG
CAGGGATGGGTATGCCAGACAATGGACCAAAGCTGATGTCTATGTAACTT
CGTTTTCGGTAGTGGGTAGAAAGATTGTAACACTACAAAAGCAATATTAA
ATTTTGAATGCTATATTTTTCTTATTAATTCCTTTGTTTTGTCTAATAGA
TGAAATGTTGGAAAACAACACTTTAGAGAGTTTGAATTGTAGTTACTGGT
GATTTTGGATAATCGGTCATATGGAATATAGTGGTTTTTGGATATATATA
TATATATATATATATATATATATATATA
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Coding sequence (CDS) from alignment at Chr2:29292729..29294856-

>Va02G048420.1_Jingnong6 ID=Va02G048420.1_Jingnong6; Name=Va02G048420.1; organism=Vigna angularis; type=CDS; length=360bp; location=Sequence derived from: Chr2:29292729..29294856- (Vigna angularis
ATGGGAGGAAAATGTCCGCACCGGAACGTGAAGAAAAGAAGATATTCTCA
CAAGACAGCACGCCGAACCAAATTTGAGTTGAAAGGCGACGATATGGTTT
ACGCGCAGCTAAACAAACCCGATGAAGAGATAACCCCTTTACCCGTAGAC
GAAGATTTGCCTGGGATGGGACAGTACTATTGCCCTCACTGCGATCGGTA
CTTTTCCAATATAACTGTGAGGGATGAACACTTTAAGACCAAACGACACA
AGAAGCGTGTAAAAATAATGATGGGTCCTGCACCACATACTCAACTTGAT
GCCGAATTAGCTGCAGGGATGGGTATGCCAGACAATGGACCAAAGCTGAT
GTCTATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR022755Znf_C2H2_jaz
IPR000690Matrin/U1-C_Znf_C2H2
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus