Va02G054090.1

Transcript Overview
NameVa02G054090.1
Unique NameVa02G054090.1_Jingnong6
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length1242
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr2chromosomeChr2:33226592..33227932 +Vigna angularis cv. Jingnong6 genome v1.7.1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjavjL081Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanR291Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaR336Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
avjcanR328Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaR377Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
avjccR0604Cajanus cajan Asha genome v1.0Cajanus cajan
avjccR0630Cajanus cajan Asha genome v1.0Cajanus cajan
avjccR0659Cajanus cajan Asha genome v1.0Cajanus cajan
anavjL0720Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anavjL0899Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anavjL1217Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjpsR360Pisum sativum Cameor genome v1aPisum sativum
avjpsR409Pisum sativum Cameor genome v1aPisum sativum
avjvfhR386Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjvfhR421Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjvrvR300Vigna radiata cv. VC1973A genome v6.0Vigna radiata
avjvuR311Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvuR313Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvssR380Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvssR416Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvssR457Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjcarR318Cicer arietinum
avjcarR360Cicer arietinum
avjccaR325Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjvumR296Vigna umbellata FF25 genome v1.0Vigna umbellata
avjccaR366Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjvumR347Vigna umbellata FF25 genome v1.0Vigna umbellata
avjvvaR339Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvvaR409Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvasR327Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvasR340Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvstR333Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvstR350Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvunR257Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
avjvunR259Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
avjpvfR393Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
avjpvfR400Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vigun07g159300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Ca_03796Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cc_v2.0_04076.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
XM_058914621.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-KK1_007210Cajanus cajan Asha genome v1.0Cajanus cajan
jg3046.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_004495508.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun07g159300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vum_08G01259.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_014655445.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
PvulFLAVERTChr07.771Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vfaba.Hedin2.R1.3g079160.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat6g143080.1Pisum sativum Cameor genome v1aPisum sativum
rna-TanjilR_31680Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigst.08G122000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigan.08G157600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Va02G054090Va02G054090_Jingnong6Vigna angularisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va02G054090.1:exon_1_Jingnong6Va02G054090.1:exon_1_Jingnong6Vigna angularisexon
Va02G054090.1:exon_2_Jingnong6Va02G054090.1:exon_2_Jingnong6Vigna angularisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va02G054090.1_Jingnong6-cdsVa02G054090.1_Jingnong6-cds-Chr2_Jingnong6:33226592..33227103Vigna angularisCDS
Va02G054090.1_Jingnong6-cdsVa02G054090.1_Jingnong6-cds-Chr2_Jingnong6:33227203..33227932Vigna angularisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Va02G054090.1_Jingnong6Va02G054090.1_Jingnong6Vigna angularispolypeptide
Va02G054090.1_Jingnong6Va02G054090.1_Jingnong6-proteinVigna angularispolypeptide


Homology
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SQ12|A0A0S3SQ12_PHAAN (Rubisco accumulation factor 1 C-terminal domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G157600 PE=4 SV=1)

HSP 1 Score: 815.839 bits (2106), Expect = 0.000e+0
Identity = 413/446 (92.60%), Postives = 413/446 (92.60%), Query Frame = 0 
Query:    1 MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST---------------------------------RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 413
            MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST                                 RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE
Sbjct:    1 MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLSTSQRVAAALFLVENRCDGKAAQELARAMKDFPSRRGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 446
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9THS0|A0A0L9THS0_PHAAN (Rubisco accumulation factor OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0233960 PE=4 SV=1)

HSP 1 Score: 815.839 bits (2106), Expect = 0.000e+0
Identity = 413/446 (92.60%), Postives = 413/446 (92.60%), Query Frame = 0 
Query:    1 MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST---------------------------------RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 413
            MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST                                 RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE
Sbjct:    1 MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLSTSQRVAAALFLVENRCDGKAAQELARAMKDFPSRRGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 446
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UXX4|A0A1S3UXX4_VIGRR (Rubisco accumulation factor 1.1, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=LOC106769716 PE=4 SV=1)

HSP 1 Score: 676.396 bits (1744), Expect = 0.000e+0
Identity = 379/447 (84.79%), Postives = 391/447 (87.47%), Query Frame = 0 
Query:    1 MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST---------------------------------RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNG-GDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 413
            MLS+SPSVTANTLSLKPNN NDLFL+SSPSFTNRRHS KPISAIINP SFRN +P PPP QQ      RPPPEPLPSQYGNLDIAGRIDILA+RLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAF+TGGAELLYE+RLLST                                 RGDKGWESFDYTLPGDCLSFMYYRQ REHRNPSEQR+LALEQALRVA TERARN+VLEELERSGEE+DE ED EGVTRVPVVRLRIGEVAEA SVVVLPVCAADEREVLEAPFECRSEGEFGVVV+EKGWGRWV LPGWDPLVGLGKGGVVVSFADARVLPWKANRWY+EEAILVVADRSK EVGADDGFYLVNG GDGKGLKVERGFTLKEK FTQSLG VLLVVRPPKEEDDDQL DEDW+
Sbjct:    1 MLSISPSVTANTLSLKPNNPNDLFLVSSPSFTNRRHSSKPISAIINPSSFRNYRPPPPPQQQVYQPF-RPPPEPLPSQYGNLDIAGRIDILADRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFDTGGAELLYELRLLSTSQRVAAALFLVENRCDGKAAKELARAMKDFPSRRGDKGWESFDYTLPGDCLSFMYYRQAREHRNPSEQRTLALEQALRVAETERARNLVLEELERSGEEQDEAEDGEGVTRVPVVRLRIGEVAEARSVVVLPVCAADEREVLEAPFECRSEGEFGVVVAEKGWGRWVALPGWDPLVGLGKGGVVVSFADARVLPWKANRWYREEAILVVADRSKREVGADDGFYLVNGYGDGKGLKVERGFTLKEKGFTQSLGAVLLVVRPPKEEDDDQLRDEDWD 446
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6N0Z6|A0A4D6N0Z6_VIGUN (Rubisco accumulation factor 1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g2490 PE=4 SV=1)

HSP 1 Score: 650.973 bits (1678), Expect = 0.000e+0
Identity = 371/447 (83.00%), Postives = 391/447 (87.47%), Query Frame = 0 
Query:    1 MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST---------------------------------RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNG-GDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 413
            MLSLSPSVTANTLSLKPNN NDLFLI+SPSFTNRRHS+KPISAIINPYSF+ +Q  PPPPQQQVYQPFRPPPEPLPS+YGNLD+A +I+IL+NRLG WYQYAPLISSLIR+GFSPPTIEETTGISGVEQNRLIVAAQVRDSLV+SNADP++LAAFETGGAELLYEIRLLS                                  RGDKGWE FDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVA TERA+NVVLEEL+ SGEEKDE ED EG TRVPVVRLRIGEVAEASSV+VLPVCA DEREVLEAPFECRS+GEFGVVV+EKGW RWVVLPGW+PLVGLGKGGVVVSFADAR LPWKANRWYKEEAILVVADRS  EVG+D GFYLVNG GD KGLKVERG TLKEK FTQSLGTVLLVVRPPKEEDDDQLSDEDWE
Sbjct:    1 MLSLSPSVTANTLSLKPNNPNDLFLITSPSFTNRRHSVKPISAIINPYSFK-RQQPPPPPQQQVYQPFRPPPEPLPSEYGNLDLAAQIEILSNRLGAWYQYAPLISSLIRQGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVQSNADPDILAAFETGGAELLYEIRLLSASQRVAAAHFLVENRCDGKAAQELARAMKDFPSRRGDKGWERFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAETERAKNVVLEELQGSGEEKDEAEDGEGATRVPVVRLRIGEVAEASSVIVLPVCAEDEREVLEAPFECRSKGEFGVVVAEKGWRRWVVLPGWEPLVGLGKGGVVVSFADARALPWKANRWYKEEAILVVADRSNREVGSDGGFYLVNGYGDAKGLKVERGSTLKEKGFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 446
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371E339|A0A371E339_MUCPR (Rubisco accumulation factor 1.2, chloroplastic (Fragment) OS=Mucuna pruriens OX=157652 GN=RAF1.2 PE=4 SV=1)

HSP 1 Score: 615.535 bits (1586), Expect = 0.000e+0
Identity = 323/447 (72.26%), Postives = 355/447 (79.42%), Query Frame = 0 
Query:    1 MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST---------------------------------RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELE-RSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 413
            MLSLSP VTANTL+LK N   +LFLI  PS T+RRH  +PISAIINP SF   QP     +Q VYQPFRPP  P+PSQ+G LDI GRIDILANRLGLWY+YAPLI SLIR+GFSPP+IEE TGISGVEQNRLIVAAQVRDSLV+S A P+LLAAFET GAELLYEIRLLST                                 RG+KGWESFDYTLPGDCLSFMYYRQ REHRNPSEQR+ ALEQALRVA TE AR  VLEEL+ + GEE DE  D E   RVPVVRL+IGEVAEASSVVVLPVC A+ER+VLEAPFECRSEGEFGVVV+EK WGRWVVLPGW+P++GLGKGGVVVSF DAR LPWKAN+WYKEE ILVV DRS  ++GADDGFY+VN  +G GLKVERG  LKE  FTQ+LG+VLLVVRPPKEEDDDQLSD+DW+
Sbjct:    1 MLSLSPCVTANTLNLKSN---ELFLIP-PSSTHRRHFSRPISAIINPSSFSKAQP---QQKQHVYQPFRPPTTPIPSQFGTLDIPGRIDILANRLGLWYEYAPLIPSLIRDGFSPPSIEEATGISGVEQNRLIVAAQVRDSLVQSAAHPDLLAAFETSGAELLYEIRLLSTSQRVAAARFLVENRCDGKAAQELARAMKDFPSRRGEKGWESFDYTLPGDCLSFMYYRQSREHRNPSEQRNAALEQALRVAETEPARREVLEELKGKDGEEGDEAGDGETAARVPVVRLKIGEVAEASSVVVLPVCEAEERQVLEAPFECRSEGEFGVVVAEKAWGRWVVLPGWEPVLGLGKGGVVVSFVDARALPWKANKWYKEEPILVVVDRSNTDLGADDGFYVVN-VEGGGLKVERGLALKELGFTQTLGSVLLVVRPPKEEDDDQLSDQDWD 439
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/TrEMBL
Match: tr|V7BGJ8|V7BGJ8_PHAVU (Rubisco accumulation factor 1 C-terminal domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G121100g PE=4 SV=1)

HSP 1 Score: 600.897 bits (1548), Expect = 0.000e+0
Identity = 344/447 (76.96%), Postives = 371/447 (83.00%), Query Frame = 0 
Query:    1 MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST---------------------------------RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNG-GDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 413
            MLSLSPSVTANT +LKP+N N LFLI+SPSFTNRRHS+KPISAIINP SF+N QP P     Q ++P     EPLPSQY  LDIAGRIDILANRLGLWYQYAPLI+SLIREGFSPPTIEETTGI+GVEQNRLIVA QVRDSLV+SNADP+LL AFET GAELLYEIRLLST                                 RGDKGWESFDYTLPGDCLSFMYYRQGREH+NPS+QRS ALEQALRVA TE+AR VVLEELE + EE+D+ ED E   RVPVVRLRIGEVAEASSVVVLPVC A+E+EVLEAPFECRSEGEFGVVV+EKGW RWVVLP W+P+VGL KGGVVVSF DARVLPWKANRWYKEEA+LVVADRSK EVGADDGFYLVNG GD  GLKVERG TLKEK FTQSLGTVLLVVRPPK+E++DQL+DEDWE
Sbjct:    7 MLSLSPSVTANTHTLKPSNPNHLFLITSPSFTNRRHSVKPISAIINPSSFKNPQPPPQQQVYQPFRPPP---EPLPSQYSTLDIAGRIDILANRLGLWYQYAPLITSLIREGFSPPTIEETTGITGVEQNRLIVATQVRDSLVQSNADPDLLYAFETSGAELLYEIRLLSTSQRVAAARFLVENNCDGKAAQELARAMKDFPSRRGDKGWESFDYTLPGDCLSFMYYRQGREHKNPSDQRSSALEQALRVAETEKARKVVLEELEGN-EEEDKVEDGE-RVRVPVVRLRIGEVAEASSVVVLPVCGAEEKEVLEAPFECRSEGEFGVVVAEKGWARWVVLPWWEPVVGLIKGGVVVSFPDARVLPWKANRWYKEEAVLVVADRSKREVGADDGFYLVNGYGDDGGLKVERGLTLKEKGFTQSLGTVLLVVRPPKDENEDQLTDEDWE 448
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/TrEMBL
Match: tr|T2DPN8|T2DPN8_PHAVU (Rubisco accumulation factor 1 C-terminal domain-containing protein OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 599.742 bits (1545), Expect = 0.000e+0
Identity = 344/447 (76.96%), Postives = 371/447 (83.00%), Query Frame = 0 
Query:    1 MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST---------------------------------RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNG-GDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 413
            MLSLSPSVTANT +LKP+N N LFLI+SPSFTNRRHS+KPISAIINP SF+N QP P     Q ++P     EPLPSQY  LDIAGRIDILANRLGLWYQYAPLI+SLIREGFSPPTIEETTGI+GVEQNRLIVA QVRDSLV+SNADP+LL AFET GAELLYEIRLLST                                 RGDKGWESFDYTLPGDCLSFMYYRQGREH+NPS+QRS ALEQALRVA TE+AR VVLEELE + EE+D+ ED E   RVPVVRLRIGEVAEASSVVVLPVC A+E+EVLEAPFECRSEGEFGVVV+EKGW RWVVLP W+P+VGL KGGVVVSF DARVLPWKANRWYKEEA+LVVADRSK EVGADDGFYLVNG GD  GLKVERG TLKEK FTQSLGTVLLVVRPPK+E++DQL+DEDWE
Sbjct:    7 MLSLSPSVTANTHTLKPSNPNHLFLITSPSFTNRRHSVKPISAIINPSSFKNPQPPPQQQVYQPFRPPP---EPLPSQYSTLDIAGRIDILANRLGLWYQYAPLITSLIREGFSPPTIEETTGITGVEQNRLIVATQVRDSLVQSNADPDLLYAFETSGAELLYEIRLLSTSQRVAAARFLVENNCDGKGGAELARAMKDFPSRRGDKGWESFDYTLPGDCLSFMYYRQGREHKNPSDQRSSALEQALRVAETEKARKVVLEELEGN-EEEDKVEDGE-RVRVPVVRLRIGEVAEASSVVVLPVCGAEEKEVLEAPFECRSEGEFGVVVAEKGWARWVVLPWWEPVVGLIKGGVVVSFPDARVLPWKANRWYKEEAVLVVADRSKREVGADDGFYLVNGYGDDGGLKVERGLTLKEKGFTQSLGTVLLVVRPPKDENEDQLTDEDWE 448
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445INJ6|A0A445INJ6_GLYSO (Rubisco accumulation factor 1.2, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_027285 PE=4 SV=1)

HSP 1 Score: 550.436 bits (1417), Expect = 0.000e+0
Identity = 328/447 (73.38%), Postives = 357/447 (79.87%), Query Frame = 0 
Query:    1 MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRN-QQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST---------------------------------RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 413
            MLSLS       L+LKP   NDLFL S+    +RR+ +KPISA++N  SF+  +QPL P  Q QVYQPFRPPP PLPSQ+G LDIAGRIDILANRLGLWY+YAPLI+SLIREGFSPPTIEETTGISGVEQNRLIV AQVRDSLV S ADP+LLAAFETGGAELLYEIRLLS                                  RGDKGW  FDYTLPGDCLSFMYYRQ REHRNPSEQR+ ALEQALRVA TE ARN++LEELE +GEE D+ +  EG  RVPVVRLRIGEVAEASSVVVLPV AA+ERE+LEAP+E RS+G FGVVV+EKGWG+WVVLP WDP+VGLGKGGVVVSF DARVLPWK NRWYKEE ILVVADRSK EVGADDGFYLVN  DG+GLKVERG  LKEK FTQSLGTVLLVVRPPKEE +D+LSDEDWE
Sbjct:    1 MLSLS----VPPLNLKPITPNDLFLSSASPSPHRRYFVKPISAVLNSSSFKKPEQPLLP--QHQVYQPFRPPPSPLPSQFGTLDIAGRIDILANRLGLWYEYAPLINSLIREGFSPPTIEETTGISGVEQNRLIVGAQVRDSLVHSKADPDLLAAFETGGAELLYEIRLLSASQRVAAARFLVENRCDGKAAQELARSMKDFPSRRGDKGWARFDYTLPGDCLSFMYYRQSREHRNPSEQRTSALEQALRVAETEAARNMILEELEGNGEEGDKVDAGEGAVRVPVVRLRIGEVAEASSVVVLPVSAAEEREILEAPYESRSQGVFGVVVAEKGWGKWVVLPSWDPVVGLGKGGVVVSFPDARVLPWKVNRWYKEEPILVVADRSKKEVGADDGFYLVN-ADGEGLKVERGSGLKEKGFTQSLGTVLLVVRPPKEE-NDELSDEDWE 439
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/TrEMBL
Match: tr|I1LBR6|I1LBR6_SOYBN (Rubisco accumulation factor 1 C-terminal domain-containing protein OS=Glycine max OX=3847 GN=100793519 PE=4 SV=1)

HSP 1 Score: 550.436 bits (1417), Expect = 0.000e+0
Identity = 328/447 (73.38%), Postives = 357/447 (79.87%), Query Frame = 0 
Query:    1 MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRN-QQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST---------------------------------RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 413
            MLSLS       L+LKP   NDLFL S+    +RR+ +KPISA++N  SF+  +QPL P  Q QVYQPFRPPP PLPSQ+G LDIAGRIDILANRLGLWY+YAPLI+SLIREGFSPPTIEETTGISGVEQNRLIV AQVRDSLV S ADP+LLAAFETGGAELLYEIRLLS                                  RGDKGW  FDYTLPGDCLSFMYYRQ REHRNPSEQR+ ALEQALRVA TE ARN++LEELE +GEE D+ +  EG  RVPVVRLRIGEVAEASSVVVLPV AA+ERE+LEAP+E RS+G FGVVV+EKGWG+WVVLP WDP+VGLGKGGVVVSF DARVLPWK NRWYKEE ILVVADRSK EVGADDGFYLVN  DG+GLKVERG  LKEK FTQSLGTVLLVVRPPKEE +D+LSDEDWE
Sbjct:    1 MLSLS----VPPLNLKPITPNDLFLSSASPSPHRRYFVKPISAVLNSSSFKKPEQPLLP--QHQVYQPFRPPPSPLPSQFGTLDIAGRIDILANRLGLWYEYAPLINSLIREGFSPPTIEETTGISGVEQNRLIVGAQVRDSLVHSKADPDLLAAFETGGAELLYEIRLLSASQRVAAARFLVENRCDGKAAQELARSMKDFPSRRGDKGWARFDYTLPGDCLSFMYYRQSREHRNPSEQRTSALEQALRVAETEAARNMILEELEGNGEEGDKVDAGEGAVRVPVVRLRIGEVAEASSVVVLPVSAAEEREILEAPYESRSQGVFGVVVAEKGWGKWVVLPSWDPVVGLGKGGVVVSFPDARVLPWKVNRWYKEEPILVVADRSKKEVGADDGFYLVN-ADGEGLKVERGSGLKEKGFTQSLGTVLLVVRPPKEE-NDELSDEDWE 439
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/TrEMBL
Match: tr|I1NIM2|I1NIM2_SOYBN (Rubisco accumulation factor 1 C-terminal domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_20G222200 PE=4 SV=2)

HSP 1 Score: 539.265 bits (1388), Expect = 0.000e+0
Identity = 317/401 (79.05%), Postives = 346/401 (86.28%), Query Frame = 0 
Query:   13 LSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLSTRGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 413
            LSL      DLF  +     +RRH +KPISA++N  SF+ +   PPPPQ QVYQPFRPPP PLPSQ+G LDIAGRID+LANRL LWY+YAPLI+SLIREGFSPPTIEETTGISGVEQNRLIV AQVRDSLV+SNADP+LLAAFETGGAELLYEIRLLS RGDKGWESFDYTLPGDCLSFMYYRQ +EHRNPSEQR+ ALEQALRVA TE ARNV+LEELE  GEE D   + E   RVPVVRLRIGEVAEASSVV+LPV AA+ERE+LEAPFE RS+GEFGVVV+EKGWG+WVVLP WDP+VGLGKGGVVVSF DARVLPWK NRWYKEE ILVVA+RS  EVGAD GFYLVN  D +GLKV+RGF LKEK FTQSLGTVLLVVRPPKEE +D+LSDEDWE
Sbjct:    2 LSLSCVTPKDLFHSTPSPSPHRRHFVKPISAVLNSSSFK-KHQQPPPPQLQVYQPFRPPPAPLPSQFGTLDIAGRIDVLANRLALWYEYAPLIASLIREGFSPPTIEETTGISGVEQNRLIVGAQVRDSLVQSNADPDLLAAFETGGAELLYEIRLLSARGDKGWESFDYTLPGDCLSFMYYRQSKEHRNPSEQRTSALEQALRVAETEAARNVILEELEGKGEEGDTVGEGEAAARVPVVRLRIGEVAEASSVVLLPVSAAEEREILEAPFESRSQGEFGVVVAEKGWGKWVVLPSWDPVVGLGKGGVVVSFPDARVLPWKVNRWYKEEPILVVANRSNREVGADHGFYLVN-SDAEGLKVQRGFALKEKGFTQSLGTVLLVVRPPKEE-NDELSDEDWE 399
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/Swiss-Prot
Match: Rubisco (accumulation factor 1.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RAF1.2 PE=1 SV=1)

HSP 1 Score: 407.912 bits (1047), Expect = 5.001e-139
Identity = 234/450 (52.00%), Postives = 302/450 (67.11%), Query Frame = 0 
Query:   25 LISSPSFTNRRHSI--KPISAIINPY----------------SFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST---------------------------------RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEEL------ERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAAD--EREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADAR-VLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDD-QLSDEDWE 413
            LISSP   +  H +   PI+  +NP                 S  N  P  PP +QQ+YQPFRPP  P+P+Q+ +LD AG+I+ILA R+ LW++YAPLISSL  +GF+PPTIEE TGIS +EQNRLIV AQVRDS+++S  +PEL++AF+TGGAELLYEIRLLST                                 RGD GW  FDY LPGDCLSF+YYRQ RE++NPS+QR+  L QAL VA +E+A+N +  EL      E+  E+K +EE+V+ + R+PVVRL+ GEVAEA+SVVVLPVC A+  E+++LEAP E  + G+F VV +EKGW RWVVLP W+P+  +GKGGV VSF D R VLPW      KEE +LVVADR +  V ADDG+YLV   +  GLK+E+G  LK ++  +SLG V+LVVRPP+E+DDD Q S ++W+
Sbjct:    7 LISSPFTQSTTHGLFTNPITRPVNPLPRTVSFTVTASMIPKRSSANMIPKNPPARQQLYQPFRPPSSPIPTQFRSLDSAGKIEILAGRMALWFEYAPLISSLYTDGFTPPTIEELTGISSIEQNRLIVGAQVRDSILQSIHEPELISAFDTGGAELLYEIRLLSTTQRVAAATFIIDRNIDSKGAQDLARAIKDYPNRRGDVGWLDFDYNLPGDCLSFLYYRQSRENKNPSDQRTSMLLQALGVAESEKAKNRLNTELYGDKEAEKEKEKKKKEEEVKAI-RIPVVRLKFGEVAEATSVVVLPVCKAEEGEKKILEAPMEIIAGGDFKVVEAEKGWKRWVVLPSWNPVAAIGKGGVAVSFRDDRKVLPWDG----KEEPLLVVADRVRNVVEADDGYYLVVAEN--GLKLEKGSDLKAREVKESLGMVVLVVRPPREDDDDWQTSHQNWD 449
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/Swiss-Prot
Match: Rubisco (accumulation factor 1.1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RAF1.1 PE=1 SV=1)

HSP 1 Score: 395.586 bits (1015), Expect = 1.812e-134
Identity = 240/450 (53.33%), Postives = 301/450 (66.89%), Query Frame = 0 
Query:    1 MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST---------------------------------RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADERE--VLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADAR-VLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDD-QLSDEDWE 413
            MLSL+ +  ++++  +       F  + P +   R     I++ + P S R       PP+QQ+YQPFRPPP P+P ++ +LD AG+I++LA+RLGLW++YAPLISSL  EGF+PP+IEE TGISGVEQN LIV AQVRDSLV+S A PEL+AAF+T GAELLYEIRLL+T                                 RGD G   FDY LPGDCLSFM YR+ REHR+PSE R+  LEQAL  A TE+A+  VL EL    EE+  +E+   + RVPVVRLR GEVA ASSVVVLPVC A+E E  +LEAP E  S GEFGVV +EK W RWVVLPGWDP+V + K GV VSF+D R VLPW      K EAI+VV DR K  V AD+G+Y +   DG G+K++RG  LKEK   +SLG V+LVVRPP+++DD+ Q++DEDW+
Sbjct:    1 MLSLTATTLSSSIFTQSKTHG--FFNTRPVY---RKPFTTITSALIPASNRQ-----APPKQQLYQPFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEELTGISGVEQNSLIVGAQVRDSLVQSGAKPELIAAFDTNGAELLYEIRLLNTTQRVAAAEYIVDHGFDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEIRTTLLEQALETAVTEKAKKAVLRELHGESEEERVKEEEIKIIRVPVVRLRFGEVAGASSVVVLPVCKAEEGEEKLLEAPMEFESGGEFGVVEAEKDWSRWVVLPGWDPVVAVRK-GVAVSFSDDREVLPWNG----KGEAIMVVIDREKKTVEADNGYYYLVVADG-GMKLDRGLVLKEKGVNESLGMVVLVVRPPRDDDDEWQINDEDWD 434
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/Swiss-Prot
Match: Rubisco (accumulation factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RAF1 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 2.275e-78
Identity = 177/400 (44.25%), Postives = 239/400 (59.75%), Query Frame = 0 
Query:   63 QVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLV--ESNADPELLAAFET-GGAELLYEIRLLSTR---------------------------------GDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERS-----GEEKDEEEDVEGVTR------VPVVRLRIGEVAEASSVVVLPVC-AADEREVL-EAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 413
            Q+YQPF PPP PLP +Y +LD+  R+ +L +RLGLW++YAPLIS+L REGF+P +IEE TGISGVEQN ++VA QVRDSLV  E     ELL  F++ GG ELLYE+R L+ R                                 GD GWE+F    PGDCL+F  +RQ RE  + +E     LE+AL V  TE AR  V  EL+R+     GEE D+E+             VPVVRL  GEVAEA++V++LPV    D  E L  AP   R++ + G+V  +KGW RW V+PGW P+  +    VV+  AD R LPW++    + E +LVVA+R + EV  +DG Y+V   +G+ L VE+G  L  +   ++   VL+VVRPP++E DD +SD++W+
Sbjct:   78 QLYQPFHPPPSPLPDKYKDLDLGQRLAVLRDRLGLWHEYAPLISALSREGFTPSSIEEATGISGVEQNSVVVATQVRDSLVADEGGFPAELLRYFDSYGGPELLYELRFLNARQRADAARHAIDRRLEPRGVRELARSMKDFPQRRGDDGWEAFTRDNPGDCLAFARFRQSREAID-AEDSVAELERALEVVDTEPARARVEAELDRARRKAAGEEVDDEDGAANAAAAASRPAVPVVRLMYGEVAEATTVLLLPVVREGDGGEALAHAPRRTRTDADLGMVEVDKGWTRWAVVPGWGPVAEVAGEAVVIELADGRTLPWRSA---EAERVLVVANRGRREV-VEDGIYVVE-REGR-LVVEKGRKLAAEGVGEAAAEVLVVVRPPRDE-DDMISDDEWD 469
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/Swiss-Prot
Match: Rubisco (accumulation factor 1, chloroplastic OS=Zea mays OX=4577 GN=RAF1 PE=1 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.182e-73
Identity = 172/401 (42.89%), Postives = 238/401 (59.35%), Query Frame = 0 
Query:   63 QVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNAD---PELLAAFET-GGAELLYEIRLLSTR---------------------------------GDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTR-----------VPVVRLRIGEVAEASSVVVLPVC-AADEREVLE-APFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 413
            Q+YQPF PPP PLP    NLD++ R+ IL +R+GLW++YAPLISSL R+GF+P +I+E TGISGVEQN L+VA+QVRDSL++  A    P+LL  F++ GG E+LYE+R L+ R                                 G++GWE+F    P DCL+F  +RQ RE  +  + R   LE+AL+V  TE  R  V  ELER+  +   EE+V+               V VVRLR GEVAEA++V++LPV    D    +E AP   +++   GVV  ++ W RW V+PGW P+       VVV  AD R LPW+ +    EE +LV+A+RSK EV  ++G Y++   +G+ L VERG  L E+    +   V++VVRPPK+E DD +SDE+W+
Sbjct:   71 QLYQPFHPPPSPLPPSLRNLDLSERLQILRDRMGLWHEYAPLISSLSRDGFNPSSIQEATGISGVEQNCLVVASQVRDSLLDDRAAAFPPDLLPYFDSLGGPEVLYELRFLNARQRADAARHAIGYRLEPKGVRELARAMKGFPRWRGEEGWEAFSKDSPADCLAFARFRQSREAID-VQDRVAELERALQVVETESGRARVELELERARRKAAGEEEVDEEGEEDDAAASLRPGVTVVRLRYGEVAEATTVILLPVVRETDGVAAMESAPRRAKTDVGLGVVEVDRAWARWAVVPGWGPVAEAADDAVVVELADGRRLPWRMS---DEEPVLVIANRSKKEV-VEEGVYVLE-REGR-LVVERGKKLAEQGIAAAAAEVVIVVRPPKDE-DDMVSDEEWD 463
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/Swiss-Prot
Match: RuBisCO (accumulation factor 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=raf1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.039e-16
Identity = 103/382 (26.96%), Postives = 167/382 (43.72%), Query Frame = 0 
Query:   70 PPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST--RGDKGWESFDYTL----------------------------PGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPV---VRLRIGEVAEASSVV----VLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFT-LKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 413
            PP  P P    N      +  L  + G W ++   I+SL + G++P  I E TG   V+QN++IV +QV +SL +S A    LA + T G+++LYE+RLL+   R   G  +F + +                            PGD +++  ++  R++ +  E RS  + + LR A +E AR  + + L           D   V++ P       R     E   +V     LP+ A + + V         E E   +V   G   WV LPGW  L+       +++ +D    P K N+  +   +LVV DRS+ E   +D  Y V   DG     E  F   + K     LG V+++VRP +  D++ ++ + W+
Sbjct:    5 PPNAPNPENATNELAQELLRKLRQKQGNWVEWGQAIASLQKSGYNPQDIFEATGFEPVQQNQVIVGSQVYNSLEKSGASAATLAHYATRGSDVLYELRLLTHEERAAAGDLTFTHKVDADEAREIAKAIKDFSRFRILPEGFSNHPGDAVAYQAWKLARQYSDLQE-RSRLIARGLRFAHSETARKQIEQLL----------VDFTVVSQRPAPIPPFFRFDTEDELPRIVPVVGQLPLKAEELKAV-----PLVEEIEPFRLVKFSGEQAWVALPGWQVLLAAEDPVTILATSDR--FP-KQNQ-TEPGPVLVVVDRSQRE--WNDFSYFVVDHDG-----ELDFQWFETKPEFPILGKVIILVRPRRILDEN-VTKDSWQ 358
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/Swiss-Prot
Match: RuBisCO (accumulation factor 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=raf1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.575e-15
Identity = 93/361 (25.76%), Postives = 163/361 (45.15%), Query Frame = 0 
Query:   83 DIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLSTRG---------------------DKGWESFDYT---------LPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 413
            + A  I  L ++ G W  +      L + G+    I E +G   V+QN +IVA+QV +SLV+   D  +L+ +    +++LYE+R+L+ +                       K ++ F Y           PGD L++  ++  R+ +N  E R+  + + L+ A +  AR  + + L     +   +  +     VPV RL   E  EA+ ++ +      + + ++A         FG +VS +G G  V +P W  +  L     V  F  A  +     R  K+E +LVV DRSK ++  D  ++L+N G+   + ++   T  E++    L  V+LV+RP K  D + L  E W+
Sbjct:   15 EAAELIRSLLHKEGTWVDWGKKCQQLQKAGYGAEEIFEQSGFQKVQQNLVIVASQVYESLVKQGIDETVLSYYRGPKSDVLYELRILNHQQRAIAAVEAQQKNLAADEAKELAKAFQEFGYLSQLPEGFTDHPGDALAYQCWKLARQKKNLPE-RTRLIVKGLKFAHSPNARQAIEKLLTDLTAQPSRKAPL-----VPVFRLE--EDQEAARLIPVAGTFPLQPQAVQAVQSLEQVEPFG-LVSYQGEGAVVPVPQWQAI--LTAEDPVAIFCPAGQVSESLAR--KDEQVLVVVDRSK-KIWNDGSYFLLNQGE--TVAIQWCETEPEREI---LAQVVLVLRPKKIFDANNLR-EPWQ 355
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/Swiss-Prot
Match: RuBisCO (accumulation factor 1 OS=Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805) OX=1140 GN=raf1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.507e-11
Identity = 67/262 (25.57%), Postives = 114/262 (43.51%), Query Frame = 0 
Query:   91 LANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLS-------------------------------TRGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTR-----VPVVRLRIGEVAE--ASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLV 314
            L  + G W  +A    +L++ G +P T+ E TG   ++QN++ VA QV DS++  +    +   ++  G++LLYE+R L                                 R  K  E+FD   PGD ++   +R  +E  + +E RS  + + L+ A +  AR ++   L           D+ GV       +P+ RL   E           LP+ ++     +EA     +EG FG+V S +G  +W+ LPGW  ++
Sbjct:   21 LRRKEGRWLAWARACQTLLKNGLNPQTLFEATGFEPIQQNQITVAMQVYDSILRQDPPAHVRETYQEWGSDLLYELRELDQEQRSLCAQLALERKLDADQIREVAKATKDFCRLPKQPENFDRH-PGDAVAHQCWRLAQERTDLTE-RSRLIARGLQFAQSAGARALIEALL----------LDLSGVPSRKPPMLPIYRLETEEDLPRLLPFAGTLPLSSSQ----IEAIAAVEAEGPFGLVSSPQG-QQWLALPGWQAIL 265
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/Swiss-Prot
Match: RuBisCO (accumulation factor 1 OS=Picosynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=raf1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.944e-11
Identity = 92/361 (25.48%), Postives = 149/361 (41.27%), Query Frame = 0 
Query:   91 LANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLS-------------------------------TRGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVV---LEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSV-VVLPVCAA---DEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDWE 413
            L ++ G W ++      L + G S   I E TG    +QN +IVAAQV  S+  S    +LLA      +++LYE+R+LS                                R  +  +SF    PGD +++  +R  ++ ++  + R+  + + L+ A +  AR  +   L +L  S          +    +P+ R       E ++V +++PV  +   +   +L  P   +    F +V         V LP W  +  L  G  VV F     LP       K E +L++ DR   +   +D  Y     DG   KVE G+   E    + LG VLLV+RP K  D++ L  E W+
Sbjct:   24 LLHKEGTWVEWGVGCQQLQQSGHSAQEIFEQTGFQTAQQNMIIVAAQVYQSIASSGVPEDLLAYCRGPRSDVLYELRILSHSQRAIAAQVCQAKSLEFDGAKELARAMQEFARLPQIPDSFTEH-PGDAVAYQAWRSAKQKKD-LQDRTRLIAKGLKFAHSATARQKIEQLLSDLTTS--------PTKAAPLLPLYRYD-----EDTNVPLLIPVAGSLPLESDRLLSVP-PLKQASPFNLVTVATA-TSLVPLPSWQNV--LTAGDPVVIFHQTDQLPQPIPG--KPEPVLILLDRQ--QTTWNDNSYFAVDADG---KVELGW-FAEAPIAKILGQVLLVMRPKKILDENNLR-EPWQ 356
[Close]
BLAST of Va02G054090.1 vs. UniProtKB/Swiss-Prot
Match: RuBisCO (accumulation factor 1 OS=Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1) OX=197221 GN=raf1 PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.673e-9
Identity = 98/366 (26.78%), Postives = 147/366 (40.16%), Query Frame = 0 
Query:   91 LANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLSTRGDK--------------------------------GWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVT--RVPVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKE----------EAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDDQLSDEDW 412
            L  + G W  +      L ++G SP  I E TGI  + QN+LI A QV  SL E  A   + A F+T G++LLYE+R+LS  GD+                                  E F  ++ GD +   Y++  R+ R+ + QRS  + Q LR   +   R   LE+L        +   V  V   R+P+ RL   E  E   +V +   A     VL+          F VV   +G    V LP W          V+++  D   + W A     E            +L+V DR   E   D  + L+     + +++     L E      +G +LLV+RPP+  D+  L+ E W
Sbjct:   16 LRRKEGTWQDWGAGCRQLQKQGLSPQAIFEATGIEPIHQNQLITALQVSQSLGE--APESVRAYFQTRGSDLLYELRVLSA-GDRLAAATLIVEKQLDVTAVHEVCRALKAVSYRKDNSEGFGESV-GDRIGRYYWQLARQQRDLA-QRSRLIAQGLRFVESASGRQ-ALEKL------LTDFTVVPAVNQPRLPLYRLDTAE--EVPYLVPVAGTAPLTATVLQQVPRLSCTEVFRVVAVPQGMS-LVALPAWQ---------VLLNAVDPVAILWPAADLPAELPPSPEGLPIAQVLLVVDRGLAEWDRDR-YLLIAPSPSEAVQLA---WLPEPPTATVVGQLLLVLRPPQVLDES-LNRELW 352
[Close]
BLAST of Va02G054090.1 vs. Araport11
Match: | (Symbols: RAF1 | Rubisco accumulation factor 1 | chr3:1225961-1227310 FORWARD LENGTH=449)

HSP 1 Score: 407.912 bits (1047), Expect = 5.224e-140
Identity = 234/450 (52.00%), Postives = 302/450 (67.11%), Query Frame = 0 
Query:   25 LISSPSFTNRRHSI--KPISAIINPY----------------SFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST---------------------------------RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEEL------ERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAAD--EREVLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADAR-VLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDD-QLSDEDWE 413
            LISSP   +  H +   PI+  +NP                 S  N  P  PP +QQ+YQPFRPP  P+P+Q+ +LD AG+I+ILA R+ LW++YAPLISSL  +GF+PPTIEE TGIS +EQNRLIV AQVRDS+++S  +PEL++AF+TGGAELLYEIRLLST                                 RGD GW  FDY LPGDCLSF+YYRQ RE++NPS+QR+  L QAL VA +E+A+N +  EL      E+  E+K +EE+V+ + R+PVVRL+ GEVAEA+SVVVLPVC A+  E+++LEAP E  + G+F VV +EKGW RWVVLP W+P+  +GKGGV VSF D R VLPW      KEE +LVVADR +  V ADDG+YLV   +  GLK+E+G  LK ++  +SLG V+LVVRPP+E+DDD Q S ++W+
Sbjct:    7 LISSPFTQSTTHGLFTNPITRPVNPLPRTVSFTVTASMIPKRSSANMIPKNPPARQQLYQPFRPPSSPIPTQFRSLDSAGKIEILAGRMALWFEYAPLISSLYTDGFTPPTIEELTGISSIEQNRLIVGAQVRDSILQSIHEPELISAFDTGGAELLYEIRLLSTTQRVAAATFIIDRNIDSKGAQDLARAIKDYPNRRGDVGWLDFDYNLPGDCLSFLYYRQSRENKNPSDQRTSMLLQALGVAESEKAKNRLNTELYGDKEAEKEKEKKKKEEEVKAI-RIPVVRLKFGEVAEATSVVVLPVCKAEEGEKKILEAPMEIIAGGDFKVVEAEKGWKRWVVLPSWNPVAAIGKGGVAVSFRDDRKVLPWDG----KEEPLLVVADRVRNVVEADDGYYLVVAEN--GLKLEKGSDLKAREVKESLGMVVLVVRPPREDDDDWQTSHQNWD 449
[Close]
BLAST of Va02G054090.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:10477810-10479114 FORWARD LENGTH=434)

HSP 1 Score: 395.586 bits (1015), Expect = 1.893e-135
Identity = 240/450 (53.33%), Postives = 301/450 (66.89%), Query Frame = 0 
Query:    1 MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST---------------------------------RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVLPVCAADERE--VLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFADAR-VLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPKEEDDD-QLSDEDWE 413
            MLSL+ +  ++++  +       F  + P +   R     I++ + P S R       PP+QQ+YQPFRPPP P+P ++ +LD AG+I++LA+RLGLW++YAPLISSL  EGF+PP+IEE TGISGVEQN LIV AQVRDSLV+S A PEL+AAF+T GAELLYEIRLL+T                                 RGD G   FDY LPGDCLSFM YR+ REHR+PSE R+  LEQAL  A TE+A+  VL EL    EE+  +E+   + RVPVVRLR GEVA ASSVVVLPVC A+E E  +LEAP E  S GEFGVV +EK W RWVVLPGWDP+V + K GV VSF+D R VLPW      K EAI+VV DR K  V AD+G+Y +   DG G+K++RG  LKEK   +SLG V+LVVRPP+++DD+ Q++DEDW+
Sbjct:    1 MLSLTATTLSSSIFTQSKTHG--FFNTRPVY---RKPFTTITSALIPASNRQ-----APPKQQLYQPFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEELTGISGVEQNSLIVGAQVRDSLVQSGAKPELIAAFDTNGAELLYEIRLLNTTQRVAAAEYIVDHGFDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEIRTTLLEQALETAVTEKAKKAVLRELHGESEEERVKEEEIKIIRVPVVRLRFGEVAGASSVVVLPVCKAEEGEEKLLEAPMEFESGGEFGVVEAEKDWSRWVVLPGWDPVVAVRK-GVAVSFSDDREVLPWNG----KGEAIMVVIDREKKTVEADNGYYYLVVADG-GMKLDRGLVLKEKGVNESLGMVVLVVRPPRDDDDEWQINDEDWD 434
[Close]
BLAST of Va02G054090.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:10477810-10478945 FORWARD LENGTH=269)

HSP 1 Score: 226.868 bits (577), Expect = 8.787e-72
Identity = 139/272 (51.10%), Postives = 172/272 (63.24%), Query Frame = 0 
Query:    7 SVTANTLS--LKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLST---------------------------------RGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEED 243
            S+TA TLS  +   +    F  + P +   R     I++ + P S R       PP+QQ+YQPFRPPP P+P ++ +LD AG+I++LA+RLGLW++YAPLISSL  EGF+PP+IEE TGISGVEQN LIV AQVRDSLV+S A PEL+AAF+T GAELLYEIRLL+T                                 RGD G   FDY LPGDCLSFM YR+ REHR+PSE R+  LEQAL  A TE+A+  VL EL    EE+  +ED
Sbjct:    3 SLTATTLSSSIFTQSKTHGFFNTRPVY---RKPFTTITSALIPASNRQ-----APPKQQLYQPFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEELTGISGVEQNSLIVGAQVRDSLVQSGAKPELIAAFDTNGAELLYEIRLLNTTQRVAAAEYIVDHGFDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEIRTTLLEQALETAVTEKAKKAVLRELHGESEEERGKED 266
The following BLAST results are available for this feature:
BLAST of Va02G054090.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3SQ12|A0A0S3SQ12_PHAAN0.000e+092.60Rubisco accumulation factor 1 C-terminal domain-co... [more]
tr|A0A0L9THS0|A0A0L9THS0_PHAAN0.000e+092.60Rubisco accumulation factor OS=Phaseolus angularis... [more]
tr|A0A1S3UXX4|A0A1S3UXX4_VIGRR0.000e+084.79Rubisco accumulation factor 1.1, chloroplastic OS=... [more]
tr|A0A4D6N0Z6|A0A4D6N0Z6_VIGUN0.000e+083.00Rubisco accumulation factor 1 OS=Vigna unguiculata... [more]
tr|A0A371E339|A0A371E339_MUCPR0.000e+072.26Rubisco accumulation factor 1.2, chloroplastic (Fr... [more]
tr|V7BGJ8|V7BGJ8_PHAVU0.000e+076.96Rubisco accumulation factor 1 C-terminal domain-co... [more]
tr|T2DPN8|T2DPN8_PHAVU0.000e+076.96Rubisco accumulation factor 1 C-terminal domain-co... [more]
tr|A0A445INJ6|A0A445INJ6_GLYSO0.000e+073.38Rubisco accumulation factor 1.2, chloroplastic OS=... [more]
tr|I1LBR6|I1LBR6_SOYBN0.000e+073.38Rubisco accumulation factor 1 C-terminal domain-co... [more]
tr|I1NIM2|I1NIM2_SOYBN0.000e+079.05Rubisco accumulation factor 1 C-terminal domain-co... [more]
back to top
BLAST of Va02G054090.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot)
Total hits: 9
Match NameE-valueIdentityDescription
Rubisco5.001e-13952.00accumulation factor 1.2, chloroplastic OS=Arabidop... [more]
Rubisco1.812e-13453.33accumulation factor 1.1, chloroplastic OS=Arabidop... [more]
Rubisco2.275e-7844.25accumulation factor 1, chloroplastic OS=Oryza sati... [more]
Rubisco1.182e-7342.89accumulation factor 1, chloroplastic OS=Zea mays O... [more]
RuBisCO1.039e-1626.96accumulation factor 1 OS=Nostoc sp. (strain PCC 71... [more]
RuBisCO1.575e-1525.76accumulation factor 1 OS=Synechocystis sp. (strain... [more]
RuBisCO3.507e-1125.57accumulation factor 1 OS=Synechococcus elongatus (... [more]
RuBisCO4.944e-1125.48accumulation factor 1 OS=Picosynechococcus sp. (st... [more]
RuBisCO2.673e-926.78accumulation factor 1 OS=Thermosynechococcus vesti... [more]
back to top
BLAST of Va02G054090.1 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
|5.224e-14052.00Symbols: RAF1 | Rubisco accumulation factor 1 | ch... [more]
|1.893e-13553.33Symbols: no symbol available | no full name availa... [more]
|8.787e-7251.10Symbols: no symbol available | no full name availa... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1
Date Performed: 2024-05-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040781Rubisco accumulation factor 1, helix turn helix domainPFAMPF18579Raf1_HTHcoord: 83..143
e-value: 4.4E-21
score: 85.6
IPR041358Rubisco accumulation factor 1, alpha helical domainPFAMPF18578Raf1_Ncoord: 178..231
e-value: 2.5E-7
score: 42.5
IPR040858Rubisco accumulation factor 1, C-terminalPFAMPF18087RuBisCo_chap_Ccoord: 250..400
e-value: 2.1E-27
score: 107.0
IPR037494Rubisco accumulation factor 1PANTHERPTHR35299RUBISCO ACCUMULATION FACTOR 1coord: 171..413

Sequences
The following sequences are available for this feature:

mRNA sequence

>Va02G054090.1_Jingnong6 ID=Va02G054090.1_Jingnong6; Name=Va02G054090.1; organism=Vigna angularis; type=mRNA; length=1242bp
ATGCTCTCCCTCTCGCCTTCTGTCACTGCAAACACTCTCAGCCTCAAACC
CAATAATCTCAATGATCTCTTTCTCATAAGCTCTCCATCATTCACCAACC
GTCGCCATTCCATCAAACCCATATCTGCCATAATCAACCCTTATTCCTTC
AGGAACCAGCAACCGCTGCCGCCGCCGCCGCAGCAGCAAGTCTACCAACC
CTTTCGCCCTCCGCCGGAACCCCTCCCATCGCAATACGGCAACCTCGACA
TCGCCGGCCGCATCGACATCCTCGCCAACCGCCTCGGCCTCTGGTACCAG
TACGCGCCCCTCATATCCTCCCTCATCCGAGAAGGCTTCTCCCCTCCCAC
CATCGAGGAAACCACCGGCATCTCCGGCGTAGAGCAGAATCGCCTCATAG
TCGCCGCGCAGGTCCGCGACTCCCTCGTCGAGTCCAACGCCGACCCCGAA
CTCCTCGCCGCCTTCGAGACCGGCGGCGCTGAGCTCCTCTACGAGATCCG
CCTTCTCAGCACGCGCGGGGATAAGGGGTGGGAGAGCTTTGATTACACTC
TCCCAGGAGATTGTCTCTCTTTTATGTACTACCGGCAGGGTAGGGAGCAC
AGGAACCCGTCGGAGCAGAGAAGTTTGGCGCTGGAGCAGGCGCTGCGCGT
GGCGGGGACGGAGAGGGCGAGGAACGTAGTGCTGGAGGAGTTGGAGAGGA
GTGGTGAGGAGAAGGATGAGGAAGAGGATGTGGAGGGAGTGACGCGTGTT
CCGGTGGTGAGGTTGAGGATTGGGGAGGTGGCGGAGGCTAGTTCAGTGGT
AGTGTTGCCGGTTTGCGCAGCAGATGAGAGGGAGGTGTTGGAGGCGCCGT
TTGAGTGTAGGAGTGAAGGGGAATTTGGGGTGGTGGTGTCGGAGAAGGGG
TGGGGGAGGTGGGTGGTGTTGCCTGGGTGGGATCCTTTGGTGGGTTTGGG
AAAAGGGGGTGTTGTTGTGTCGTTCGCGGATGCGAGGGTTTTGCCGTGGA
AGGCTAATAGGTGGTACAAAGAAGAGGCCATATTGGTGGTTGCTGACAGG
AGTAAGATAGAAGTGGGTGCTGATGATGGGTTTTATCTTGTGAATGGTGG
TGATGGTAAGGGTTTGAAGGTGGAGAGGGGTTTCACATTGAAGGAAAAAG
ATTTCACTCAGAGTTTAGGAACTGTGTTGTTGGTTGTTAGACCTCCTAAA
GAAGAGGATGATGATCAATTGAGTGACGAAGATTGGGAGTGA
back to top

protein sequence of Va02G054090.1_Jingnong6

>Va02G054090.1_Jingnong6 ID=Va02G054090.1_Jingnong6; Name=Va02G054090.1_Jingnong6; organism=Vigna angularis; type=polypeptide; length=413bp
MLSLSPSVTANTLSLKPNNLNDLFLISSPSFTNRRHSIKPISAIINPYSF
RNQQPLPPPPQQQVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQ
YAPLISSLIREGFSPPTIEETTGISGVEQNRLIVAAQVRDSLVESNADPE
LLAAFETGGAELLYEIRLLSTRGDKGWESFDYTLPGDCLSFMYYRQGREH
RNPSEQRSLALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRV
PVVRLRIGEVAEASSVVVLPVCAADEREVLEAPFECRSEGEFGVVVSEKG
WGRWVVLPGWDPLVGLGKGGVVVSFADARVLPWKANRWYKEEAILVVADR
SKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQSLGTVLLVVRPPK
EEDDDQLSDEDWE
back to top

mRNA from alignment at Chr2:33226592..33227932+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Va02G054090.1_Jingnong6 ID=Va02G054090.1_Jingnong6; Name=Va02G054090.1; organism=Vigna angularis; type=mRNA; length=1341bp; location=Sequence derived from: Chr2:33226592..33227932+ (Vigna angularis
ATGCTCTCCCTCTCGCCTTCTGTCACTGCAAACACTCTCAGCCTCAAACC
CAATAATCTCAATGATCTCTTTCTCATAAGCTCTCCATCATTCACCAACC
GTCGCCATTCCATCAAACCCATATCTGCCATAATCAACCCTTATTCCTTC
AGGAACCAGCAACCGCTGCCGCCGCCGCCGCAGCAGCAAGTCTACCAACC
CTTTCGCCCTCCGCCGGAACCCCTCCCATCGCAATACGGCAACCTCGACA
TCGCCGGCCGCATCGACATCCTCGCCAACCGCCTCGGCCTCTGGTACCAG
TACGCGCCCCTCATATCCTCCCTCATCCGAGAAGGCTTCTCCCCTCCCAC
CATCGAGGAAACCACCGGCATCTCCGGCGTAGAGCAGAATCGCCTCATAG
TCGCCGCGCAGGTCCGCGACTCCCTCGTCGAGTCCAACGCCGACCCCGAA
CTCCTCGCCGCCTTCGAGACCGGCGGCGCTGAGCTCCTCTACGAGATCCG
CCTTCTCAGCACTTCGCAGCGGGTGGCCGCCGCGCTTTTCCTTGTCGAGA
ATCGCTGTGACGGGAAGGCGGCGCAGGAGCTGGCGCGCGCAATGAAGGAT
TTCCCGAGCAGGCGCGGGGATAAGGGGTGGGAGAGCTTTGATTACACTCT
CCCAGGAGATTGTCTCTCTTTTATGTACTACCGGCAGGGTAGGGAGCACA
GGAACCCGTCGGAGCAGAGAAGTTTGGCGCTGGAGCAGGCGCTGCGCGTG
GCGGGGACGGAGAGGGCGAGGAACGTAGTGCTGGAGGAGTTGGAGAGGAG
TGGTGAGGAGAAGGATGAGGAAGAGGATGTGGAGGGAGTGACGCGTGTTC
CGGTGGTGAGGTTGAGGATTGGGGAGGTGGCGGAGGCTAGTTCAGTGGTA
GTGTTGCCGGTTTGCGCAGCAGATGAGAGGGAGGTGTTGGAGGCGCCGTT
TGAGTGTAGGAGTGAAGGGGAATTTGGGGTGGTGGTGTCGGAGAAGGGGT
GGGGGAGGTGGGTGGTGTTGCCTGGGTGGGATCCTTTGGTGGGTTTGGGA
AAAGGGGGTGTTGTTGTGTCGTTCGCGGATGCGAGGGTTTTGCCGTGGAA
GGCTAATAGGTGGTACAAAGAAGAGGCCATATTGGTGGTTGCTGACAGGA
GTAAGATAGAAGTGGGTGCTGATGATGGGTTTTATCTTGTGAATGGTGGT
GATGGTAAGGGTTTGAAGGTGGAGAGGGGTTTCACATTGAAGGAAAAAGA
TTTCACTCAGAGTTTAGGAACTGTGTTGTTGGTTGTTAGACCTCCTAAAG
AAGAGGATGATGATCAATTGAGTGACGAAGATTGGGAGTGA
back to top

Coding sequence (CDS) from alignment at Chr2:33226592..33227932+

>Va02G054090.1_Jingnong6 ID=Va02G054090.1_Jingnong6; Name=Va02G054090.1; organism=Vigna angularis; type=CDS; length=1242bp; location=Sequence derived from: Chr2:33226592..33227932+ (Vigna angularis
ATGCTCTCCCTCTCGCCTTCTGTCACTGCAAACACTCTCAGCCTCAAACC
CAATAATCTCAATGATCTCTTTCTCATAAGCTCTCCATCATTCACCAACC
GTCGCCATTCCATCAAACCCATATCTGCCATAATCAACCCTTATTCCTTC
AGGAACCAGCAACCGCTGCCGCCGCCGCCGCAGCAGCAAGTCTACCAACC
CTTTCGCCCTCCGCCGGAACCCCTCCCATCGCAATACGGCAACCTCGACA
TCGCCGGCCGCATCGACATCCTCGCCAACCGCCTCGGCCTCTGGTACCAG
TACGCGCCCCTCATATCCTCCCTCATCCGAGAAGGCTTCTCCCCTCCCAC
CATCGAGGAAACCACCGGCATCTCCGGCGTAGAGCAGAATCGCCTCATAG
TCGCCGCGCAGGTCCGCGACTCCCTCGTCGAGTCCAACGCCGACCCCGAA
CTCCTCGCCGCCTTCGAGACCGGCGGCGCTGAGCTCCTCTACGAGATCCG
CCTTCTCAGCACGCGCGGGGATAAGGGGTGGGAGAGCTTTGATTACACTC
TCCCAGGAGATTGTCTCTCTTTTATGTACTACCGGCAGGGTAGGGAGCAC
AGGAACCCGTCGGAGCAGAGAAGTTTGGCGCTGGAGCAGGCGCTGCGCGT
GGCGGGGACGGAGAGGGCGAGGAACGTAGTGCTGGAGGAGTTGGAGAGGA
GTGGTGAGGAGAAGGATGAGGAAGAGGATGTGGAGGGAGTGACGCGTGTT
CCGGTGGTGAGGTTGAGGATTGGGGAGGTGGCGGAGGCTAGTTCAGTGGT
AGTGTTGCCGGTTTGCGCAGCAGATGAGAGGGAGGTGTTGGAGGCGCCGT
TTGAGTGTAGGAGTGAAGGGGAATTTGGGGTGGTGGTGTCGGAGAAGGGG
TGGGGGAGGTGGGTGGTGTTGCCTGGGTGGGATCCTTTGGTGGGTTTGGG
AAAAGGGGGTGTTGTTGTGTCGTTCGCGGATGCGAGGGTTTTGCCGTGGA
AGGCTAATAGGTGGTACAAAGAAGAGGCCATATTGGTGGTTGCTGACAGG
AGTAAGATAGAAGTGGGTGCTGATGATGGGTTTTATCTTGTGAATGGTGG
TGATGGTAAGGGTTTGAAGGTGGAGAGGGGTTTCACATTGAAGGAAAAAG
ATTTCACTCAGAGTTTAGGAACTGTGTTGTTGGTTGTTAGACCTCCTAAA
GAAGAGGATGATGATCAATTGAGTGACGAAGATTGGGAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR040781Raf1_HTH
IPR041358Raf1_N
IPR040858Raf1_C
IPR037494RAF1