Va03G076000.1

Transcript Overview


Name	Va03G076000.1
Unique Name	Va03G076000.1_Jingnong6
Type	mRNA
Organism	Vigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length	456

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr3	chromosome	Chr3:46693037..46693642 -	Vigna angularis cv. Jingnong6 genome v1.7.1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna angularis cv. Jingnong6 genome v1.7.1	2024-05-08
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL	2024-05-23
InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1	2024-05-23
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot	2024-05-23
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11	2024-05-23

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
avjavjL043	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjavjL225	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjavjR264	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjcanR360	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjcanR380	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjcaR419	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
avjcanR416	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjcaR440	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
avjcanR431	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjcaR476	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
avjcaR492	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
avjccR0764	Cajanus cajan Asha genome v1.0	Cajanus cajan
avjccR0771	Cajanus cajan Asha genome v1.0	Cajanus cajan
avjccR0799	Cajanus cajan Asha genome v1.0	Cajanus cajan
avjpsR466	Pisum sativum Cameor genome v1a	Pisum sativum
avjpsR485	Pisum sativum Cameor genome v1a	Pisum sativum
avjpsR499	Pisum sativum Cameor genome v1a	Pisum sativum
avjpvR452	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
avjvfhR465	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjpvR482	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
avjpvR505	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
avjvfhR499	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjvfhR515	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjpvR519	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
avjvrvR343	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
avjvrvR344	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
avjvrvR386	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
avjvuR337	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvuR359	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvuR383	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvuR390	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvssR485	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvssR550	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvssR574	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjcarR397		Cicer arietinum
avjcarR417		Cicer arietinum
avjcarR443		Cicer arietinum
avjcarR478		Cicer arietinum
avjccaR428	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjvumR382	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjccaR435	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjccaR450	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjvumR424	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjccaR460	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjvumR438	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjvumR441	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjvvaR428	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
avjvvaR444	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
avjvvaR477	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
avjvvaR515	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
avjvasR379	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvasR388	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvasR392	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvasR412	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvstR397	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvstR412	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvstR415	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvstR435	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvunR282	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
avjvunR303	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
avjvunR322	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
avjpvfR450	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
avjvunR327	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
avjpvfR475	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
avjpvfR500	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
avjpvfR519	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Va03G076000	Va03G076000_Jingnong6	Vigna angularis	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va03G076000.1:three_prime_UTR_1_Jingnong6	Va03G076000.1:three_prime_UTR_1_Jingnong6	Vigna angularis	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va03G076000.1:exon_1_Jingnong6	Va03G076000.1:exon_1_Jingnong6	Vigna angularis	exon
Va03G076000.1:exon_2_Jingnong6	Va03G076000.1:exon_2_Jingnong6	Vigna angularis	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va03G076000.1_Jingnong6-cds	Va03G076000.1_Jingnong6-cds-Chr3_Jingnong6:46693068..46693246	Vigna angularis	CDS
Va03G076000.1_Jingnong6-cds	Va03G076000.1_Jingnong6-cds-Chr3_Jingnong6:46693328..46693604	Vigna angularis	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va03G076000.1:five_prime_UTR_1_Jingnong6	Va03G076000.1:five_prime_UTR_1_Jingnong6	Vigna angularis	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Va03G076000.1_Jingnong6	Va03G076000.1_Jingnong6	Vigna angularis	polypeptide
Va03G076000.1_Jingnong6	Va03G076000.1_Jingnong6-protein	Vigna angularis	polypeptide

Homology

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TG16|A0A0L9TG16_PHAAN (Homeobox domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan662s000300 PE=3 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 2.868e-106
Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0

Query:    1 MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEYGWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPSREYFHF 151
            MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNV CWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEYGWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQP+REYFHF
Sbjct:    1 MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVPCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEYGWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPAREYFHF 151

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VTM6|A0A0L9VTM6_PHAAN (Homeobox domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan11g145900 PE=4 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 3.389e-105
Identity = 147/151 (97.35%), Postives = 149/151 (98.68%), Query Frame = 0

Query:    1 MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEYGWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPSREYFHF 151
            MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYE GWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQP+RE+F F
Sbjct:    1 MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYENGWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPAREFFQF 151

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0L222|A0A8T0L222_PHAAN (Homeobox domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0060370 PE=4 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 6.921e-104
Identity = 148/157 (94.27%), Postives = 150/157 (95.54%), Query Frame = 0

Query:    1 MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEY------GWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPSREYFHF 151
            MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMY++      GWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQP REYFHF
Sbjct:    1 MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYDFFFLKENGWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPVREYFHF 157

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UZ22|A0A0L9UZ22_PHAAN (Homeobox domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g154600 PE=4 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.825e-103
Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 0

Query:    1 MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEYGWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPSREYFHF 151
            MMSEMEIERYTSQRWR TDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRR QAEIDPTGTQFSQLPLYMYEYGWVVMRAPRLLDLFPIPIIIDP+TEIPPPPLVTFRTRAPSTELSLRPPQP+RE+F F
Sbjct:    1 MMSEMEIERYTSQRWRQTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRGQAEIDPTGTQFSQLPLYMYEYGWVVMRAPRLLDLFPIPIIIDPDTEIPPPPLVTFRTRAPSTELSLRPPQPAREFFRF 151

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0KTS9|A0A8T0KTS9_PHAAN (Homeobox domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0238560 PE=4 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 5.650e-102
Identity = 145/158 (91.77%), Postives = 150/158 (94.94%), Query Frame = 0

Query:    1 MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEY-------GWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPSREYFHF 151
            MMSEMEIERYTSQRWRPT+DQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMY++       GWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQP+RE+F F
Sbjct:    1 MMSEMEIERYTSQRWRPTEDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYDFFFLLKENGWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPAREFFRF 158

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0L0U1|A0A8T0L0U1_PHAAN (Homeobox domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0055360 PE=4 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 6.772e-102
Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = 0

Query:    5 MEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEYGWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPSREYFHF 151
            MEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYE GWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQP+RE+F F
Sbjct:    1 MEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYENGWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPAREFFRF 147

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0K4B0|A0A8T0K4B0_PHAAN (Homeobox domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0182750 PE=4 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 1.666e-101
Identity = 142/147 (96.60%), Postives = 145/147 (98.64%), Query Frame = 0

Query:    5 MEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEYGWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPSREYFHF 151
            MEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMY+ GWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQP+RE+F F
Sbjct:    1 MEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYKNGWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPAREFFRF 147

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0JXW8|A0A8T0JXW8_PHAAN (Homeobox domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0147650 PE=4 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 1.484e-100
Identity = 143/156 (91.67%), Postives = 148/156 (94.87%), Query Frame = 0

Query:    1 MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMY-------EYGWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPSREYF 149
            MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRT+GDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMY       EY WV+MRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQP+R++F
Sbjct:    1 MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTFGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYDNFFLLKEYDWVIMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPARQFF 156

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0JHG3|A0A8T0JHG3_PHAAN (Homeobox domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0241050 PE=4 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 7.075e-98
Identity = 138/148 (93.24%), Postives = 144/148 (97.30%), Query Frame = 0

Query:    5 MEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMY---EYGWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPSREYF 149
            MEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQ+VEITSRLRT+GDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMY   EY WV+MRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQP+R++F
Sbjct:    1 MEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQIVEITSRLRTFGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYGLKEYDWVIMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPARQFF 148

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9T695|A0A0L9T695_PHAAN (Homeobox domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan232s000200 PE=3 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 7.587e-98
Identity = 134/151 (88.74%), Postives = 143/151 (94.70%), Query Frame = 0

Query:    1 MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEYGWVVMRAPRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPSREYFHF 151
            M SEME ERYTSQRWRPTDDQ+KMMTNI+NYGVTHPSRAQVVEI SRLRT+ DA+EYNVHCWFNNHGNRVRRWQAEIDPTGT FSQLPLYMYE  WV+MRAPRLLDLFP+PIIIDPETE PPPPLVTFRTRAPSTELSLRPPQP+RE+FH+
Sbjct:    2 MTSEMESERYTSQRWRPTDDQIKMMTNIYNYGVTHPSRAQVVEIASRLRTFADATEYNVHCWFNNHGNRVRRWQAEIDPTGTLFSQLPLYMYENNWVIMRAPRLLDLFPVPIIIDPETEFPPPPLVTFRTRAPSTELSLRPPQPAREFFHY 152

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/Swiss-Prot
Match: WUSCHEL-related (homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 2.229e-12
Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0

Query:    1 MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAE 76
            M +E+     +S RW PT DQ+ ++ N++  G+  PS  Q+ +IT RLR YG     NV  WF NH  R R+ Q +
Sbjct:    1 MENEVNAGTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQKQKQ 76

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/Swiss-Prot
Match: Protein (WUSCHEL OS=Petunia hybrida OX=4102 GN=WUS PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 4.040e-10
Identity = 31/84 (36.90%), Postives = 47/84 (55.95%), Query Frame = 0

Query:    9 RYTSQRWRPTDDQVKMMTNIF-NYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYM 91
            R  S RW PT DQ++++ +++ N GV  P+  Q+  I+++LR YG     NV  WF NH  R R+ +  I    T  + LP+ M
Sbjct:   42 RQNSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQKKRLIAAATTDNTNLPMQM 125

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/Swiss-Prot
Match: WUSCHEL-related (homeobox 8 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX8 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.048e-9
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 0

Query:   13 QRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEI 77
            QRW PT  Q++++ NIF+ G   PS+ ++ +IT+ L  +G  SE NV+ WF N   R +R QA +
Sbjct:   91 QRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQAAL 155

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/Swiss-Prot
Match: WUSCHEL-related (homeobox 13 OS=Arabidopsis thaliana OX=3702 GN=WOX13 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 1.030e-8
Identity = 27/74 (36.49%), Postives = 42/74 (56.76%), Query Frame = 0

Query:    1 MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQ 74
            MMS +  +    QRW PT  Q++++  IF+ G   PS+ ++ +IT  L  +G  +E NV+ WF N   R +R Q
Sbjct:   86 MMSSLGHKMTARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRKQ 159

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/Swiss-Prot
Match: Protein (WUSCHEL OS=Solanum lycopersicum OX=4081 GN=WUS PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 1.040e-8
Identity = 26/65 (40.00%), Postives = 40/65 (61.54%), Query Frame = 0

Query:    9 RYTSQRWRPTDDQVKMMTNIF-NYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRR 72
            R +S RW PT DQ++++ +++ N GV  P+  Q+  I+++LR YG     NV  WF NH  R R+
Sbjct:   21 RQSSSRWTPTSDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQ 85

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/Swiss-Prot
Match: WUSCHEL-related (homeobox 7 OS=Arabidopsis thaliana OX=3702 GN=WOX7 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 1.115e-8
Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 0

Query:   14 RWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVR 71
            RW PT +QVK++T++F  G+  PS  Q+ +I+  L  YG     NV  WF NH  R R
Sbjct:   29 RWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWFQNHKARER 86

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/Swiss-Prot
Match: WUSCHEL-related (homeobox 9 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX9 PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 2.925e-8
Identity = 24/58 (41.38%), Postives = 33/58 (56.90%), Query Frame = 0

Query:   14 RWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVR 71
            RW PT +QVK++T +F  G+  PS  Q+  I++ L  +G     NV  WF NH  R R
Sbjct:   14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARER 71

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/Swiss-Prot
Match: Protein (WUSCHEL OS=Antirrhinum majus OX=4151 GN=WUS PE=2 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 3.008e-8
Identity = 26/65 (40.00%), Postives = 40/65 (61.54%), Query Frame = 0

Query:    9 RYTSQRWRPTDDQVKMMTNIF-NYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRR 72
            R +S RW PT DQ++++ +++ N GV  P+  Q+  I+++LR YG     NV  WF NH  R R+
Sbjct:   35 RQSSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQ 99

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/Swiss-Prot
Match: WUSCHEL-related (homeobox 5 OS=Arabidopsis thaliana OX=3702 GN=WOX5 PE=2 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 3.932e-8
Identity = 24/64 (37.50%), Postives = 39/64 (60.94%), Query Frame = 0

Query:   14 RWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEI 77
            RW PT +Q+K++T++F  G+  P+  Q+ +I++ L  YG     NV  WF NH  R R+ + +I
Sbjct:   24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQKRRKI 87

[Close]

BLAST of Va03G076000.1 vs. UniProtKB/Swiss-Prot
Match: Protein (WUSCHEL OS=Arabidopsis thaliana OX=3702 GN=WUS PE=1 SV=2)

HSP 1 Score: 52.7582 bits (125), Expect = 1.200e-7
Identity = 26/65 (40.00%), Postives = 39/65 (60.00%), Query Frame = 0

Query:    9 RYTSQRWRPTDDQVKMMTNIF-NYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRR 72
            R TS RW PT +Q+K++  ++ N  +  P+  Q+ +IT+RLR +G     NV  WF NH  R R+
Sbjct:   33 RQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARERQ 97

[Close]

BLAST of Va03G076000.1 vs. Araport11
Match: | (Symbols: WOX2 | WUSCHEL related homeobox 2 | chr5:23933408-23934627 REVERSE LENGTH=260)

HSP 1 Score: 65.855 bits (159), Expect = 2.275e-13
Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0

Query:    1 MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAE 76
            M +E+     +S RW PT DQ+ ++ N++  G+  PS  Q+ +IT RLR YG     NV  WF NH  R R+ Q +
Sbjct:    1 MENEVNAGTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQKQKQ 76

[Close]

BLAST of Va03G076000.1 vs. Araport11
Match: | (Symbols: HB-4, ATWOX13, WOX13 | WUSCHEL related homeobox 13 | chr4:16875814-16877167 REVERSE LENGTH=268)

HSP 1 Score: 55.8398 bits (133), Expect = 1.046e-9
Identity = 27/74 (36.49%), Postives = 42/74 (56.76%), Query Frame = 0

Query:    1 MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQ 74
            MMS +  +    QRW PT  Q++++  IF+ G   PS+ ++ +IT  L  +G  +E NV+ WF N   R +R Q
Sbjct:   86 MMSSLGHKMTARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRKQ 159

[Close]

BLAST of Va03G076000.1 vs. Araport11
Match: | (Symbols: WOX5A, WOX7 | WUSCHEL related homeobox 7, WUSCHEL related homeobox 5A | chr5:1734487-1734855 FORWARD LENGTH=122)

HSP 1 Score: 53.5286 bits (127), Expect = 1.150e-9
Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 0

Query:   14 RWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVR 71
            RW PT +QVK++T++F  G+  PS  Q+ +I+  L  YG     NV  WF NH  R R
Sbjct:   29 RWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWFQNHKARER 86

[Close]

BLAST of Va03G076000.1 vs. Araport11
Match: | (Symbols: WOX5B, WOX5 | WUSCHEL related homeobox 5, WUSCHEL related homeobox 5B | chr3:3527606-3528263 FORWARD LENGTH=182)

HSP 1 Score: 53.1434 bits (126), Expect = 4.025e-9
Identity = 24/64 (37.50%), Postives = 39/64 (60.94%), Query Frame = 0

Query:   14 RWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEI 77
            RW PT +Q+K++T++F  G+  P+  Q+ +I++ L  YG     NV  WF NH  R R+ + +I
Sbjct:   24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQKRRKI 87

[Close]

BLAST of Va03G076000.1 vs. Araport11
Match: | (Symbols: WOX14, ATWOX14 | WUSCHEL RELATED HOMEOBOX 14, WUSCHEL related homeobox 14 | chr1:7183330-7183866 FORWARD LENGTH=149)

HSP 1 Score: 51.6026 bits (122), Expect = 1.015e-8
Identity = 25/83 (30.12%), Postives = 43/83 (51.81%), Query Frame = 0

Query:   11 TSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYE 93
            T  RW PT  Q++++ +I++ G   P+R ++ EI + L  +G  +E NV+ WF N   R +R Q +      Q   + +   E
Sbjct:   30 TRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRARSKRKQPQTTTANGQADDVAVTTEE 112

[Close]

BLAST of Va03G076000.1 vs. Araport11
Match: | (Symbols: WUS, WUS1, PGA6 | WUSCHEL 1, WUSCHEL | chr2:7809100-7810671 REVERSE LENGTH=292)

HSP 1 Score: 52.7582 bits (125), Expect = 1.217e-8
Identity = 26/65 (40.00%), Postives = 39/65 (60.00%), Query Frame = 0

Query:    9 RYTSQRWRPTDDQVKMMTNIF-NYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRR 72
            R TS RW PT +Q+K++  ++ N  +  P+  Q+ +IT+RLR +G     NV  WF NH  R R+
Sbjct:   33 RQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARERQ 97

[Close]

BLAST of Va03G076000.1 vs. Araport11
Match: | (Symbols: WOX1 | WUSCHEL related homeobox 1 | chr3:6161155-6163183 REVERSE LENGTH=350)

HSP 1 Score: 52.373 bits (124), Expect = 2.113e-8
Identity = 24/61 (39.34%), Postives = 35/61 (57.38%), Query Frame = 0

Query:   12 SQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRR 72
            S RW PT DQ++++  ++  G   PS   + +IT++LR YG     NV  WF NH  R R+
Sbjct:   74 SSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQ 134

[Close]

BLAST of Va03G076000.1 vs. Araport11
Match: | (Symbols: WOX14, ATWOX14 | WUSCHEL RELATED HOMEOBOX 14, WUSCHEL related homeobox 14 | chr1:7182558-7183752 FORWARD LENGTH=202)

HSP 1 Score: 51.6026 bits (122), Expect = 2.186e-8
Identity = 25/83 (30.12%), Postives = 43/83 (51.81%), Query Frame = 0

Query:   11 TSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYE 93
            T  RW PT  Q++++ +I++ G   P+R ++ EI + L  +G  +E NV+ WF N   R +R Q +      Q   + +   E
Sbjct:   92 TRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRARSKRKQPQTTTANGQADDVAVTTEE 174

[Close]

BLAST of Va03G076000.1 vs. Araport11
Match: | (Symbols: WOX14, ATWOX14 | WUSCHEL RELATED HOMEOBOX 14, WUSCHEL related homeobox 14 | chr1:7182558-7183866 FORWARD LENGTH=211)

HSP 1 Score: 51.2174 bits (121), Expect = 2.623e-8
Identity = 25/83 (30.12%), Postives = 43/83 (51.81%), Query Frame = 0

Query:   11 TSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYE 93
            T  RW PT  Q++++ +I++ G   P+R ++ EI + L  +G  +E NV+ WF N   R +R Q +      Q   + +   E
Sbjct:   92 TRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRARSKRKQPQTTTANGQADDVAVTTEE 174

[Close]

BLAST of Va03G076000.1 vs. Araport11
Match: | (Symbols: WOX9A, STIP, HB-3, WOX9 | STIMPY, WUSCHEL-RELATED HOMEOBOX 9, WUSCHEL related homeobox 9A, homeobox-3 | chr2:14342037-14343597 REVERSE LENGTH=388)

HSP 1 Score: 50.8322 bits (120), Expect = 6.292e-8
Identity = 20/59 (33.90%), Postives = 35/59 (59.32%), Query Frame = 0

Query:   14 RWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTYGDASEYNVHCWFNNHGNRVRR 72
            RW P  +Q++++  IFN G+ +P R ++  I ++L+ YG   + NV  WF N  +R + 
Sbjct:   55 RWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKH 113

The following BLAST results are available for this feature:

BLAST of Va03G076000.1 vs. UniProtKB/TrEMBL
BLAST of Va03G076000.1 vs. UniProtKB/Swiss-Prot
BLAST of Va03G076000.1 vs. Araport11

BLAST of Va03G076000.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A0L9TG16\|A0A0L9TG16_PHAAN	2.868e-106	98.68	Homeobox domain-containing protein OS=Phaseolus an...	[more]
tr\|A0A0L9VTM6\|A0A0L9VTM6_PHAAN	3.389e-105	97.35	Homeobox domain-containing protein OS=Phaseolus an...	[more]
tr\|A0A8T0L222\|A0A8T0L222_PHAAN	6.921e-104	94.27	Homeobox domain-containing protein OS=Phaseolus an...	[more]
tr\|A0A0L9UZ22\|A0A0L9UZ22_PHAAN	2.825e-103	96.03	Homeobox domain-containing protein OS=Phaseolus an...	[more]
tr\|A0A8T0KTS9\|A0A8T0KTS9_PHAAN	5.650e-102	91.77	Homeobox domain-containing protein OS=Phaseolus an...	[more]
tr\|A0A8T0L0U1\|A0A8T0L0U1_PHAAN	6.772e-102	97.28	Homeobox domain-containing protein OS=Phaseolus an...	[more]
tr\|A0A8T0K4B0\|A0A8T0K4B0_PHAAN	1.666e-101	96.60	Homeobox domain-containing protein OS=Phaseolus an...	[more]
tr\|A0A8T0JXW8\|A0A8T0JXW8_PHAAN	1.484e-100	91.67	Homeobox domain-containing protein OS=Phaseolus an...	[more]
tr\|A0A8T0JHG3\|A0A8T0JHG3_PHAAN	7.075e-98	93.24	Homeobox domain-containing protein OS=Phaseolus an...	[more]
tr\|A0A0L9T695\|A0A0L9T695_PHAAN	7.587e-98	88.74	Homeobox domain-containing protein OS=Phaseolus an...	[more]

BLAST of Va03G076000.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
WUSCHEL-related	2.229e-12	39.47	homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2...	[more]
Protein	4.040e-10	36.90	WUSCHEL OS=Petunia hybrida OX=4102 GN=WUS PE=2 SV=...	[more]
WUSCHEL-related	1.048e-9	41.54	homeobox 8 OS=Oryza sativa subsp. japonica OX=3994...	[more]
WUSCHEL-related	1.030e-8	36.49	homeobox 13 OS=Arabidopsis thaliana OX=3702 GN=WOX...	[more]
Protein	1.040e-8	40.00	WUSCHEL OS=Solanum lycopersicum OX=4081 GN=WUS PE=...	[more]
WUSCHEL-related	1.115e-8	43.10	homeobox 7 OS=Arabidopsis thaliana OX=3702 GN=WOX7...	[more]
WUSCHEL-related	2.925e-8	41.38	homeobox 9 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Protein	3.008e-8	40.00	WUSCHEL OS=Antirrhinum majus OX=4151 GN=WUS PE=2 S...	[more]
WUSCHEL-related	3.932e-8	37.50	homeobox 5 OS=Arabidopsis thaliana OX=3702 GN=WOX5...	[more]
Protein	1.200e-7	40.00	WUSCHEL OS=Arabidopsis thaliana OX=3702 GN=WUS PE=...	[more]

BLAST of Va03G076000.1 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11)
Total hits: 10


Match Name	E-value	Identity	Description
\|	2.275e-13	39.47	Symbols: WOX2 \| WUSCHEL related homeobox 2 \| chr5:...	[more]
\|	1.046e-9	36.49	Symbols: HB-4, ATWOX13, WOX13 \| WUSCHEL related ho...	[more]
\|	1.150e-9	43.10	Symbols: WOX5A, WOX7 \| WUSCHEL related homeobox 7,...	[more]
\|	4.025e-9	37.50	Symbols: WOX5B, WOX5 \| WUSCHEL related homeobox 5,...	[more]
\|	1.015e-8	30.12	Symbols: WOX14, ATWOX14 \| WUSCHEL RELATED HOMEOBOX...	[more]
\|	1.217e-8	40.00	Symbols: WUS, WUS1, PGA6 \| WUSCHEL 1, WUSCHEL \| ch...	[more]
\|	2.113e-8	39.34	Symbols: WOX1 \| WUSCHEL related homeobox 1 \| chr3:...	[more]
\|	2.186e-8	30.12	Symbols: WOX14, ATWOX14 \| WUSCHEL RELATED HOMEOBOX...	[more]
\|	2.623e-8	30.12	Symbols: WOX14, ATWOX14 \| WUSCHEL RELATED HOMEOBOX...	[more]
\|	6.292e-8	33.90	Symbols: WOX9A, STIP, HB-3, WOX9 \| STIMPY, WUSCHEL...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1
Date Performed: 2024-05-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 13..71 e-value: 0.0098 score: 27.0
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 8..73 score: 9.053596
None	No IPR available	GENE3D	1.10.10.60		coord: 12..77 e-value: 2.2E-5 score: 26.0
IPR044559	WUSCHEL-related homeobox 13-like	PANTHER	PTHR46777	WUSCHEL-RELATED HOMEOBOX 13	coord: 10..75
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 13..74

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr3:46693037..46693642-
coding sequence from alignment at Chr3:46693037..46693642-

mRNA sequence

>Va03G076000.1_Jingnong6 ID=Va03G076000.1_Jingnong6; Name=Va03G076000.1; organism=Vigna angularis; type=mRNA; length=456bp
ATGATGAGTGAGATGGAAATCGAGAGATACACGAGTCAGCGGTGGCGCCC
AACAGATGATCAGGTCAAGATGATGACCAACATCTTTAACTATGGGGTCA
CTCATCCAAGCCGAGCGCAAGTCGTCGAGATCACGTCTCGACTAAGGACC
TACGGAGATGCCAGCGAATACAACGTGCACTGCTGGTTCAACAACCACGG
CAATCGGGTCAGGCGCTGGCAAGCGGAGATAGACCCCACTGGCACTCAGT
TTTCACAACTGCCGCTGTATATGTACGAATATGGCTGGGTGGTAATGAGG
GCACCGAGGCTGTTGGACCTCTTCCCCATTCCTATCATAATCGATCCAGA
AACAGAGATTCCTCCGCCTCCGCTCGTGACTTTTCGTACCAGAGCTCCCT
CAACGGAGCTCTCCCTTAGACCACCACAACCATCTCGAGAATACTTCCAT
TTTTAA

protein sequence of Va03G076000.1_Jingnong6

>Va03G076000.1_Jingnong6 ID=Va03G076000.1_Jingnong6; Name=Va03G076000.1_Jingnong6; organism=Vigna angularis; type=polypeptide; length=151bp
MMSEMEIERYTSQRWRPTDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRT
YGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEYGWVVMR
APRLLDLFPIPIIIDPETEIPPPPLVTFRTRAPSTELSLRPPQPSREYFH
F

mRNA from alignment at Chr3:46693037..46693642-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Va03G076000.1_Jingnong6 ID=Va03G076000.1_Jingnong6; Name=Va03G076000.1; organism=Vigna angularis; type=mRNA; length=606bp; location=Sequence derived from: Chr3:46693037..46693642- (Vigna angularis
TTCTTTTTATTTTTATATATATTTTTTATTTAGAAAATATGATGAGTGAG
ATGGAAATCGAGAGATACACGAGTCAGCGGTGGCGCCCAACAGATGATCA
GGTCAAGATGATGACCAACATCTTTAACTATGGGGTCACTCATCCAAGCC
GAGCGCAAGTCGTCGAGATCACGTCTCGACTAAGGACCTACGGAGATGCC
AGCGAATACAACGTGCACTGCTGGTTCAACAACCACGGCAATCGGGTCAG
GCGCTGGCAAGCGGAGATAGACCCCACTGGCACTCAGTTTTCACAACTGC
CGCTGTATATGTACGGTAAGAACTCTCATCAGATCTCAATTTTATTGAAT
TTTTTTTTTTTTATTATTATTAACAAGATTTTTTTTTGTTTGAAAGAATA
TGGCTGGGTGGTAATGAGGGCACCGAGGCTGTTGGACCTCTTCCCCATTC
CTATCATAATCGATCCAGAAACAGAGATTCCTCCGCCTCCGCTCGTGACT
TTTCGTACCAGAGCTCCCTCAACGGAGCTCTCCCTTAGACCACCACAACC
ATCTCGAGAATACTTCCATTTTTAATGCTTTATTTATTTTTTTTTTATGT
TTTTAT

Coding sequence (CDS) from alignment at Chr3:46693037..46693642-

>Va03G076000.1_Jingnong6 ID=Va03G076000.1_Jingnong6; Name=Va03G076000.1; organism=Vigna angularis; type=CDS; length=456bp; location=Sequence derived from: Chr3:46693037..46693642- (Vigna angularis
ATGATGAGTGAGATGGAAATCGAGAGATACACGAGTCAGCGGTGGCGCCC
AACAGATGATCAGGTCAAGATGATGACCAACATCTTTAACTATGGGGTCA
CTCATCCAAGCCGAGCGCAAGTCGTCGAGATCACGTCTCGACTAAGGACC
TACGGAGATGCCAGCGAATACAACGTGCACTGCTGGTTCAACAACCACGG
CAATCGGGTCAGGCGCTGGCAAGCGGAGATAGACCCCACTGGCACTCAGT
TTTCACAACTGCCGCTGTATATGTACGAATATGGCTGGGTGGTAATGAGG
GCACCGAGGCTGTTGGACCTCTTCCCCATTCCTATCATAATCGATCCAGA
AACAGAGATTCCTCCGCCTCCGCTCGTGACTTTTCGTACCAGAGCTCCCT
CAACGGAGCTCTCCCTTAGACCACCACAACCATCTCGAGAATACTTCCAT
TTTTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001356	HD
IPR044559	WOX13-like
IPR009057	Homeodomain-like_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	DNA-binding transcription factor activity

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