Va04G047320.1

Transcript Overview


Name	Va04G047320.1
Unique Name	Va04G047320.1_Jingnong6
Type	mRNA
Organism	Vigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length	540

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr4	chromosome	Chr4:30035032..30035812 -	Vigna angularis cv. Jingnong6 genome v1.7.1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna angularis cv. Jingnong6 genome v1.7.1	2024-05-08
InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1	2024-05-23
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL	2024-05-23
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot	2024-05-23
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11	2024-05-23

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
avjavjL131	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anavjL0198	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anavjL0396	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjcanR473	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjcanR497	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjcaR535	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
avjcanR528	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjcaR559	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
avjcaR592	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
avjccR0956	Cajanus cajan Asha genome v1.0	Cajanus cajan
anavjL0800	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anavjL1304	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjpsR555	Pisum sativum Cameor genome v1a	Pisum sativum
avjpvR569	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
avjpvR620	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
avjvfhR597	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjvfhR638	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjvfhR644	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjvrvR415	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
avjvuR426	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvuR478	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvssR591	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvssR602	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvssR686	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjcarR514		Cicer arietinum
avjcarR537		Cicer arietinum
avjcarR577		Cicer arietinum
avjccaR515	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjvumR478	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjccaR528	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjvumR494	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjccaR548	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjvvaR566	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
avjvvaR645	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
avjvvaR651	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
avjvasR473	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvasR511	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvstR502	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvstR539	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvunR356	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
avjvunR405	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
avjpvfR566	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
avjpvfR624	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Vigan.02G166900.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Va04G047320	Va04G047320_Jingnong6	Vigna angularis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va04G047320.1:exon_1_Jingnong6	Va04G047320.1:exon_1_Jingnong6	Vigna angularis	exon
Va04G047320.1:exon_2_Jingnong6	Va04G047320.1:exon_2_Jingnong6	Vigna angularis	exon
Va04G047320.1:exon_3_Jingnong6	Va04G047320.1:exon_3_Jingnong6	Vigna angularis	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va04G047320.1_Jingnong6-cds	Va04G047320.1_Jingnong6-cds-Chr4_Jingnong6:30035032..30035211	Vigna angularis	CDS
Va04G047320.1_Jingnong6-cds	Va04G047320.1_Jingnong6-cds-Chr4_Jingnong6:30035297..30035545	Vigna angularis	CDS
Va04G047320.1_Jingnong6-cds	Va04G047320.1_Jingnong6-cds-Chr4_Jingnong6:30035702..30035812	Vigna angularis	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Va04G047320.1_Jingnong6	Va04G047320.1_Jingnong6	Vigna angularis	polypeptide
Va04G047320.1_Jingnong6	Va04G047320.1_Jingnong6-protein	Vigna angularis	polypeptide

Homology

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UEF7|A0A0L9UEF7_PHAAN (MPN domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g112000 PE=4 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 2.264e-129
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQKRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSSENLSIRHGYFKAESSL 179
            MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQKRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSSENLSIRHGYFKAESSL
Sbjct:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQKRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSSENLSIRHGYFKAESSL 179

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UPX1|A0A0L9UPX1_PHAAN (MPN domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g217900 PE=3 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 7.856e-120
Identity = 177/196 (90.31%), Postives = 177/196 (90.31%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQ-----------------KRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSSENLSIRHGYFKAESSL 179
            MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQ                 KRSDRRKDRVETDPELLAAA ALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSSENLSIR GYFKAESSL
Sbjct:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQHSKNGNVTALIWGASPQKRSDRRKDRVETDPELLAAATALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSSENLSIRPGYFKAESSL 196

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SFI7|A0A0S3SFI7_PHAAN (MPN domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G015000 PE=3 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 1.055e-119
Identity = 177/196 (90.31%), Postives = 177/196 (90.31%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQ-----------------KRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSSENLSIRHGYFKAESSL 179
            MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQ                 KRSDRRKDRVETDPELLAAA ALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSSENLSIR GYFKAESSL
Sbjct:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQHSKNGNVTALIWGASPQKRSDRRKDRVETDPELLAAATALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSSENLSIRPGYFKAESSL 196

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0K5T7|A0A8T0K5T7_PHAAN (MPN domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0180630 PE=4 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 1.594e-103
Identity = 152/172 (88.37%), Postives = 153/172 (88.95%), Query Frame = 0

Query:    8 MSEEVWLSCLTHALSTETEEIMGLLFGDIQ-----------------KRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSS 162
            MSEEVWLSCLTHALSTETEEIMGLLFGDIQ                 KRSDRRKDRVETDP+LLAAA ALAERMTIATGTTTRVIGWYHSH HITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSS
Sbjct:    1 MSEEVWLSCLTHALSTETEEIMGLLFGDIQHSKNGNVIALIWGASPQKRSDRRKDRVETDPKLLAAATALAERMTIATGTTTRVIGWYHSHLHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSS 172

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445IFE8|A0A445IFE8_GLYSO (Lys-63-specific deubiquitinase BRCC36 isoform B OS=Glycine soja OX=3848 GN=D0Y65_032828 PE=4 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 2.286e-98
Identity = 151/195 (77.44%), Postives = 164/195 (84.10%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQK-----------------RSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSSENLSIRHGYFKAESS 178
            MSLTSVKMSEEVWLSC+THALSTETEEIMGLL GDIQ                  RSDRRKDRVET+PE LAAA ALA+RMT +TG TTRVIGWYHSHPHITVLPSHVDV+TQA YQLLDSGFIGLIFSC+SEDVNKVGRIQVIAFQS DG+ N +S P+PLS VNRSP+IDIDSSPSSSEN+S R GYFKAE++
Sbjct:    1 MSLTSVKMSEEVWLSCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRRKDRVETNPEQLAAASALADRMTTSTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKHNHMSRPVPLSPVNRSPVIDIDSSPSSSENVSTRPGYFKAENA 195

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8KFD0|A0A8B8KFD0_ABRPR (Lys-63-specific deubiquitinase BRCC36-like isoform X1 OS=Abrus precatorius OX=3816 GN=LOC113854849 PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 9.225e-98
Identity = 154/194 (79.38%), Postives = 165/194 (85.05%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQK-----------------RSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSSENLSIRHGYFKAES 177
            MSLTSVKMSEEVWL+C+THALSTETEEIMGLL GDIQ                  RSDRRKDRVET+PE LAAA ALA+RMT +TG TTRVIGWYHSHPHITVLPSHVDV+TQA YQLLDSGFIGLIFSC+SEDVNKVGRIQVIAFQS DG+QNQLS PIPLS VNR+ +IDIDSSPSSSEN+SIR GYFKAES
Sbjct:    1 MSLTSVKMSEEVWLTCVTHALSTETEEIMGLLLGDIQHSKNGAVTALIWGASPQTRSDRRKDRVETNPEQLAAASALADRMTASTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKQNQLSRPIPLSPVNRTSVIDIDSSPSSSENVSIRSGYFKAES 194

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445GM92|A0A445GM92_GLYSO (Lys-63-specific deubiquitinase BRCC36 isoform E OS=Glycine soja OX=3848 GN=D0Y65_039624 PE=4 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 3.365e-97
Identity = 150/195 (76.92%), Postives = 163/195 (83.59%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDI-----------------QKRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSSENLSIRHGYFKAESS 178
            MSLTSV MSEEVWLSC+THALSTETEEIMGLL GDI                 Q RSDRRKDRVET+PE LAAA ALA+RMT +TG TTRVIGWYHSHPHITVLPSHVDV+TQA YQLLDSGFIGLIFSC+SEDVNKVGRIQVIAFQS DG+QN  S PIPLS VNRSP+IDIDSSPSSSEN+S + GYF+AE++
Sbjct:    1 MSLTSVTMSEEVWLSCVTHALSTETEEIMGLLLGDIKHSKNGSVTALIWGASPQTRSDRRKDRVETNPEQLAAASALADRMTTSTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKQNHRSRPIPLSPVNRSPVIDIDSSPSSSENVSTKPGYFEAENA 195

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0FUR5|A0A0R0FUR5_SOYBN (MPN domain-containing protein OS=Glycine max OX=3847 GN=100784991 PE=4 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 3.365e-97
Identity = 150/195 (76.92%), Postives = 163/195 (83.59%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDI-----------------QKRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSSENLSIRHGYFKAESS 178
            MSLTSV MSEEVWLSC+THALSTETEEIMGLL GDI                 Q RSDRRKDRVET+PE LAAA ALA+RMT +TG TTRVIGWYHSHPHITVLPSHVDV+TQA YQLLDSGFIGLIFSC+SEDVNKVGRIQVIAFQS DG+QN  S PIPLS VNRSP+IDIDSSPSSSEN+S + GYF+AE++
Sbjct:    1 MSLTSVTMSEEVWLSCVTHALSTETEEIMGLLLGDIKHSKNGSVTALIWGASPQTRSDRRKDRVETNPEQLAAASALADRMTTSTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKQNHRSRPIPLSPVNRSPVIDIDSSPSSSENVSTKPGYFEAENA 195

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/TrEMBL
Match: tr|I1M5R8|I1M5R8_SOYBN (MPN domain-containing protein OS=Glycine max OX=3847 GN=100781761 PE=3 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 7.465e-97
Identity = 151/195 (77.44%), Postives = 164/195 (84.10%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQK-----------------RSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSSENLSIRHGYFKAESS 178
            MSLTSVKMSEEVWLSC+THALSTETEEIMGLL GDIQ                  RSDRRKDRVET+PE LAAA ALA+RMT +TG TTRVIGWYHSHPHITVLPSHVDV+TQA YQLLDSGFIGLIFSC+SEDVNKVGRIQVIAFQS DG+ N +S P+PLS VNRSP+IDIDSSPSSSEN+S R GYFKAE++
Sbjct:    1 MSLTSVKMSEEVWLSCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRRKDRVETNPEQLAAASALADRMTTSTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKHNHMSRPVPLSPVNRSPVIDIDSSPSSSENVSTRPGYFKAENA 195

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2SGM0|A0A0B2SGM0_GLYSO (Lys-63-specific deubiquitinase BRCC36 OS=Glycine soja OX=3848 GN=D0Y65_032828 PE=3 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 7.465e-97
Identity = 151/195 (77.44%), Postives = 164/195 (84.10%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQK-----------------RSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSSENLSIRHGYFKAESS 178
            MSLTSVKMSEEVWLSC+THALSTETEEIMGLL GDIQ                  RSDRRKDRVET+PE LAAA ALA+RMT +TG TTRVIGWYHSHPHITVLPSHVDV+TQA YQLLDSGFIGLIFSC+SEDVNKVGRIQVIAFQS DG+ N +S P+PLS VNRSP+IDIDSSPSSSEN+S R GYFKAE++
Sbjct:    1 MSLTSVKMSEEVWLSCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRRKDRVETNPEQLAAASALADRMTTSTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKHNHMSRPVPLSPVNRSPVIDIDSSPSSSENVSTRPGYFKAENA 195

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/Swiss-Prot
Match: Lys-63-specific (deubiquitinase BRCC36 OS=Salmo salar OX=8030 GN=brcc3 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.120e-49
Identity = 77/150 (51.33%), Postives = 101/150 (67.33%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQ-------------KRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVN-KVGRIQVIAFQSYDGRQ 136
            M++++V +  + +L C+ HALSTE EE+MGL  G++              +RSD+RKDRVE  PE L++A   AER+   TG   RV+GWYHSHPHITV PSHVDV+TQA YQ++D GF+GLIFSCF ED N K GR+    FQS   ++
Sbjct:    1 MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRVEISPEQLSSAATEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQK 150

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/Swiss-Prot
Match: Lys-63-specific (deubiquitinase OS=Danio rerio OX=7955 GN=brcc3 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.504e-49
Identity = 78/150 (52.00%), Postives = 100/150 (66.67%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQ-------------KRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVN-KVGRIQVIAFQSYDGRQ 136
            M++ +V +  + +L C+ HALSTE EE+MGL  G++              +RSD+RKDRVE  PE L+AA   AER+   TG   RV+GWYHSHPHITV PSHVDV+TQA YQ++D GF+GLIFSCF ED N K GR+    FQS   ++
Sbjct:   28 MAVNAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQK 177

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/Swiss-Prot
Match: Lys-63-specific (deubiquitinase BRCC36 OS=Xenopus tropicalis OX=8364 GN=brcc3 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 9.220e-49
Identity = 78/151 (51.66%), Postives = 102/151 (67.55%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQ-------------KRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVN-KVGRIQVIAFQSYDGRQN 137
            M++ +V +  + +L C+TH+LSTE EE+MGL  G++              +RSD+RKDRVE  PE L+AA   A+R+   TG   RV+GWYHSHPHITV PSHVDV+TQA YQ++D GF+GLIFSCF ED N K GRI    FQS   +++
Sbjct:    1 MAVQAVHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKVVHIHSVIILRRSDKRKDRVEISPEQLSAATTEADRLAEITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDVGFVGLIFSCFIEDKNTKTGRILYTCFQSVQAQKS 151

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/Swiss-Prot
Match: Lys-63-specific (deubiquitinase BRCC36 OS=Xenopus laevis OX=8355 GN=brcc3 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.551e-48
Identity = 78/151 (51.66%), Postives = 102/151 (67.55%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQ-------------KRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVN-KVGRIQVIAFQSYDGRQN 137
            M++ +V +  + +L C+TH+LSTE EE+MGL  G++              +RSD+RKDRVE  PE L+AA   A+R+   TG   RV+GWYHSHPHITV PSHVDV+TQA YQ++D GF+GLIFSCF ED N K GRI    FQS   +++
Sbjct:    1 MAVQAVHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKLVHIHSVIILRRSDKRKDRVEISPEQLSAATIEADRLADITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDVGFVGLIFSCFIEDKNTKTGRILYTCFQSVQAQKS 151

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/Swiss-Prot
Match: Lys-63-specific (deubiquitinase BRCC36 OS=Pongo abelii OX=9601 GN=BRCC3 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.994e-45
Identity = 77/168 (45.83%), Postives = 96/168 (57.14%), Query Frame = 0

Query:    8 MSEEVWLSCLTHALSTETEEIMGLLFGDIQ-------------------------------------KRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVN-KVGRIQVIAFQSYDGRQN 137
            +  + +L CL HALSTE EE+MGL  G++                                      +RSD+RKDRVE  PE L+AA   AER+   TG   RV+GWYHSHPHITV PSHVDV+TQA YQ++D GF+GLIFSCF ED N K GR+    FQS   +++
Sbjct:   14 LESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/Swiss-Prot
Match: Lys-63-specific (deubiquitinase BRCC36 OS=Callithrix jacchus OX=9483 GN=BRCC3 PE=3 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 1.357e-44
Identity = 80/175 (45.71%), Postives = 99/175 (56.57%), Query Frame = 0

Query:    8 MSEEVWLSCLTHALSTETEEIMGLLFGDIQ-------------------------------------KRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVN-KVGRIQVIAFQSYDGRQN--QLSGP 142
            +  + +L CL HALSTE EE+MGL  G++                                      +RSD+RKDRVE  PE L+AA   AER+   TG   RV+GWYHSHPHITV PSHVDV+TQA YQ++D GF+GLIFSCF ED N K GR+    FQS   +++   L GP
Sbjct:   14 LESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESLHGP 188

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/Swiss-Prot
Match: Lys-63-specific (deubiquitinase BRCC36 OS=Homo sapiens OX=9606 GN=BRCC3 PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 1.612e-44
Identity = 80/175 (45.71%), Postives = 99/175 (56.57%), Query Frame = 0

Query:    8 MSEEVWLSCLTHALSTETEEIMGLLFGDIQ-------------------------------------KRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVN-KVGRIQVIAFQSYDGRQN--QLSGP 142
            +  + +L CL HALSTE EE+MGL  G++                                      +RSD+RKDRVE  PE L+AA   AER+   TG   RV+GWYHSHPHITV PSHVDV+TQA YQ++D GF+GLIFSCF ED N K GR+    FQS   +++   L GP
Sbjct:   14 LESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESLHGP 188

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/Swiss-Prot
Match: Lys-63-specific (deubiquitinase BRCC36 OS=Bos taurus OX=9913 GN=BRCC3 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.586e-44
Identity = 82/188 (43.62%), Postives = 103/188 (54.79%), Query Frame = 0

Query:    8 MSEEVWLSCLTHALSTETEEIMGLLFGDIQ-------------------------------------KRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVN-KVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDID 157
            +  + +L CL HALSTE EE+MGL  G++                                      +RSD+RKDRVE  PE L+AA   AER+   TG   RV+GWYHSHPHITV PSHVDV+TQA YQ++D GF+GLIFSCF ED N K GR+    FQS   +++  S   P    + S  I I+
Sbjct:   14 LESDAFLVCLNHALSTEKEEVMGLCIGELNDDLRNDPKFTYTGTEMRTVAEKVDTVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESPRGPRDFWSSSQHISIE 201

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/Swiss-Prot
Match: Lys-63-specific (deubiquitinase BRCC36 OS=Rattus norvegicus OX=10116 GN=Brcc3 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.601e-44
Identity = 77/168 (45.83%), Postives = 96/168 (57.14%), Query Frame = 0

Query:    8 MSEEVWLSCLTHALSTETEEIMGLLFGDIQ-------------------------------------KRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVN-KVGRIQVIAFQSYDGRQN 137
            +  + +L CL HALSTE EE+MGL  G++                                      +RSD+RKDRVE  PE L+AA   AER+   TG   RV+GWYHSHPHITV PSHVDV+TQA YQ++D GF+GLIFSCF ED N K GR+    FQS   +++
Sbjct:   14 LESDAFLVCLNHALSTEKEEVMGLCIGELNDDVRSESKFAHAGSDVCTVPEKVDSIRVVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQKS 181

[Close]

BLAST of Va04G047320.1 vs. UniProtKB/Swiss-Prot
Match: Lys-63-specific (deubiquitinase BRCC36 OS=Mus musculus OX=10090 GN=Brcc3 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.555e-44
Identity = 78/168 (46.43%), Postives = 96/168 (57.14%), Query Frame = 0

Query:    8 MSEEVWLSCLTHALSTETEEIMGLLFGD-------------------------------------IQKRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVN-KVGRIQVIAFQSYDGRQN 137
            +  + +L CL HALSTE EE+MGL  G+                                     I +RSD+RKDRVE  PE L+AA   AER+   TG   RV+GWYHSHPHITV PSHVDV+TQA YQ++D GF+GLIFSCF ED N K GR+    FQS   +++
Sbjct:   14 LESDAFLVCLNHALSTEKEEVMGLCIGELNDDIRSDSKFTYTGTEMRTVQEKMDTIRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181

[Close]

BLAST of Va04G047320.1 vs. Araport11
Match: | (Symbols: BRCC36A, AtBRCC36A | BRCA1/BRCA2-containing complex 36 homolog A | chr1:30163546-30165628 REVERSE LENGTH=371)

HSP 1 Score: 249.98 bits (637), Expect = 7.332e-83
Identity = 122/175 (69.71%), Postives = 136/175 (77.71%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDI------------------QKRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDID 157
            MSLT V MSE+VWL+CLTHALSTETEEIMGLL GDI                  Q RSDR+KDRVET+PE LAAA A A+RMTI+TG TTRVIGWYHSHPHITVLPSHVDV+TQA YQLLDSGFIGLIFSCFSED NKVGRIQVIAFQS DG+ N +   + L L N+  +ID++
Sbjct:    1 MSLTCVNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKDGGSATAMIWGASPQSRSDRQKDRVETNPEQLAAASAQADRMTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDLE 175

[Close]

BLAST of Va04G047320.1 vs. Araport11
Match: | (Symbols: BRCC36A, AtBRCC36A | BRCA1/BRCA2-containing complex 36 homolog A | chr1:30163357-30165628 REVERSE LENGTH=406)

HSP 1 Score: 250.366 bits (638), Expect = 1.306e-82
Identity = 122/175 (69.71%), Postives = 136/175 (77.71%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDI------------------QKRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDID 157
            MSLT V MSE+VWL+CLTHALSTETEEIMGLL GDI                  Q RSDR+KDRVET+PE LAAA A A+RMTI+TG TTRVIGWYHSHPHITVLPSHVDV+TQA YQLLDSGFIGLIFSCFSED NKVGRIQVIAFQS DG+ N +   + L L N+  +ID++
Sbjct:    1 MSLTCVNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKDGGSATAMIWGASPQSRSDRQKDRVETNPEQLAAASAQADRMTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDLE 175

[Close]

BLAST of Va04G047320.1 vs. Araport11
Match: | (Symbols: AtBRCC36B, BRCC36B | BRCA1/BRCA2-containing complex 36 homolog B | chr3:2151027-2153264 REVERSE LENGTH=405)

HSP 1 Score: 243.432 bits (620), Expect = 6.767e-80
Identity = 120/168 (71.43%), Postives = 131/168 (77.98%), Query Frame = 0

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDI------------------QKRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNR 150
            MSLT V MSE+VWL+CLTHALSTETEEIMGLL GDI                  Q RSDR+KDRVET+PE LAAA A A+RMTI+TG TTRVIGWYHSHPHITVLPSHVDV+TQA YQLLDSGFIGLIFSCFSED NKVGRIQVIAFQS DG+ N +   + L L N+
Sbjct:    1 MSLTCVNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKNGESATAMIWGASPQPRSDRQKDRVETNPEQLAAASAQADRMTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANK 168

[Close]

Query:    1 MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDI------------------QKRSDRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNR 150
            MSLT V MSE+VWL+CLTHALSTETEEIMGLL GDI                  Q RSDR+KDRVET+PE LAAA A A+RMTI+TG TTRVIGWYHSHPHITVLPSHVDV+TQA YQLLDSGFIGLIFSCFSED NKVGRIQVIAFQS DG+ N +   + L L N+
Sbjct:    1 MSLTCVNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKNGESATAMIWGASPQPRSDRQKDRVETNPEQLAAASAQADRMTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANK 168

[Close]

BLAST of Va04G047320.1 vs. Araport11
Match: | (Symbols: AtBRCC36B, BRCC36B | BRCA1/BRCA2-containing complex 36 homolog B | chr3:2151027-2152659 REVERSE LENGTH=324)

HSP 1 Score: 152.14 bits (383), Expect = 2.700e-45
Identity = 69/87 (79.31%), Postives = 75/87 (86.21%), Query Frame = 0

Query:   64 MTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNR 150
            MTI+TG TTRVIGWYHSHPHITVLPSHVDV+TQA YQLLDSGFIGLIFSCFSED NKVGRIQVIAFQS DG+ N +   + L L N+
Sbjct:    1 MTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANK 87

[Close]

BLAST of Va04G047320.1 vs. Araport11
Match: | (Symbols: CSN5B, CSN5, AJH2 | COP9-signalosome 5B | chr1:26852560-26854255 FORWARD LENGTH=358)

HSP 1 Score: 48.521 bits (114), Expect = 7.091e-7
Identity = 37/138 (26.81%), Postives = 59/138 (42.75%), Query Frame = 0

Query:    6 VKMSEEVWLSCLTHALSTETEEIMGLLFGDIQKRS-----------DRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSY 132
            VK+S    L  + HA S  T EIMGL+ G     +           +  + RV    +     +  ++   +A G    V+GWYHSHP      S +DV TQ   Q     F+ ++           G++++ AF++Y
Sbjct:   59 VKISALALLKMVVHARSGGTIEIMGLMQGKTDGDTIIVMDAFALPVEGTETRVNAQDDAYEYMVEYSQTNKLA-GRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVIDPTR--TVSAGKVEIGAFRTY 193

[Close]

BLAST of Va04G047320.1 vs. Araport11
Match: | (Symbols: CSN5A, AJH1 | ARABIDOPSIS JAB1 HOMOLOG 1, COP9 signalosome 5A | chr1:8109998-8111895 REVERSE LENGTH=351)

HSP 1 Score: 48.521 bits (114), Expect = 7.952e-7
Identity = 36/138 (26.09%), Postives = 59/138 (42.75%), Query Frame = 0

Query:    6 VKMSEEVWLSCLTHALSTETEEIMGLLFGDIQKRS-----------DRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSY 132
            V +S    L  + HA S  T EIMGL+ G  +  +           +  + RV    +     +  ++   +A G    V+GWYHSHP      S +DV TQ   Q     F+ ++           G++++ AF++Y
Sbjct:   59 VHISALALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLA-GRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVID--PTRTVSAGKVEIGAFRTY 193

[Close]

BLAST of Va04G047320.1 vs. Araport11
Match: | (Symbols: CSN5A, AJH1 | ARABIDOPSIS JAB1 HOMOLOG 1, COP9 signalosome 5A | chr1:8109882-8111895 REVERSE LENGTH=357)

HSP 1 Score: 48.1358 bits (113), Expect = 9.230e-7
Identity = 34/130 (26.15%), Postives = 56/130 (43.08%), Query Frame = 0

Query:   14 LSCLTHALSTETEEIMGLLFGDIQKRS-----------DRRKDRVETDPELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSY 132
            L  + HA S  T EIMGL+ G  +  +           +  + RV    +     +  ++   +A G    V+GWYHSHP      S +DV TQ   Q     F+ ++           G++++ AF++Y
Sbjct:   67 LKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLA-GRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTR--TVSAGKVEIGAFRTY 193

The following BLAST results are available for this feature:

BLAST of Va04G047320.1 vs. UniProtKB/TrEMBL
BLAST of Va04G047320.1 vs. UniProtKB/Swiss-Prot
BLAST of Va04G047320.1 vs. Araport11

BLAST of Va04G047320.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A0L9UEF7\|A0A0L9UEF7_PHAAN	2.264e-129	100.00	MPN domain-containing protein OS=Phaseolus angular...	[more]
tr\|A0A0L9UPX1\|A0A0L9UPX1_PHAAN	7.856e-120	90.31	MPN domain-containing protein OS=Phaseolus angular...	[more]
tr\|A0A0S3SFI7\|A0A0S3SFI7_PHAAN	1.055e-119	90.31	MPN domain-containing protein OS=Vigna angularis v...	[more]
tr\|A0A8T0K5T7\|A0A8T0K5T7_PHAAN	1.594e-103	88.37	MPN domain-containing protein OS=Phaseolus angular...	[more]
tr\|A0A445IFE8\|A0A445IFE8_GLYSO	2.286e-98	77.44	Lys-63-specific deubiquitinase BRCC36 isoform B OS...	[more]
tr\|A0A8B8KFD0\|A0A8B8KFD0_ABRPR	9.225e-98	79.38	Lys-63-specific deubiquitinase BRCC36-like isoform...	[more]
tr\|A0A445GM92\|A0A445GM92_GLYSO	3.365e-97	76.92	Lys-63-specific deubiquitinase BRCC36 isoform E OS...	[more]
tr\|A0A0R0FUR5\|A0A0R0FUR5_SOYBN	3.365e-97	76.92	MPN domain-containing protein OS=Glycine max OX=38...	[more]
tr\|I1M5R8\|I1M5R8_SOYBN	7.465e-97	77.44	MPN domain-containing protein OS=Glycine max OX=38...	[more]
tr\|A0A0B2SGM0\|A0A0B2SGM0_GLYSO	7.465e-97	77.44	Lys-63-specific deubiquitinase BRCC36 OS=Glycine s...	[more]

BLAST of Va04G047320.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
Lys-63-specific	1.120e-49	51.33	deubiquitinase BRCC36 OS=Salmo salar OX=8030 GN=br...	[more]
Lys-63-specific	1.504e-49	52.00	deubiquitinase OS=Danio rerio OX=7955 GN=brcc3 PE=...	[more]
Lys-63-specific	9.220e-49	51.66	deubiquitinase BRCC36 OS=Xenopus tropicalis OX=836...	[more]
Lys-63-specific	1.551e-48	51.66	deubiquitinase BRCC36 OS=Xenopus laevis OX=8355 GN...	[more]
Lys-63-specific	8.994e-45	45.83	deubiquitinase BRCC36 OS=Pongo abelii OX=9601 GN=B...	[more]
Lys-63-specific	1.357e-44	45.71	deubiquitinase BRCC36 OS=Callithrix jacchus OX=948...	[more]
Lys-63-specific	1.612e-44	45.71	deubiquitinase BRCC36 OS=Homo sapiens OX=9606 GN=B...	[more]
Lys-63-specific	2.586e-44	43.62	deubiquitinase BRCC36 OS=Bos taurus OX=9913 GN=BRC...	[more]
Lys-63-specific	2.601e-44	45.83	deubiquitinase BRCC36 OS=Rattus norvegicus OX=1011...	[more]
Lys-63-specific	3.555e-44	46.43	deubiquitinase BRCC36 OS=Mus musculus OX=10090 GN=...	[more]

BLAST of Va04G047320.1 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11)
Total hits: 8


Match Name	E-value	Identity	Description
\|	7.332e-83	69.71	Symbols: BRCC36A, AtBRCC36A \| BRCA1/BRCA2-containi...	[more]
\|	1.306e-82	69.71	Symbols: BRCC36A, AtBRCC36A \| BRCA1/BRCA2-containi...	[more]
\|	6.767e-80	71.43	Symbols: AtBRCC36B, BRCC36B \| BRCA1/BRCA2-containi...	[more]
\|	6.767e-80	71.43	Symbols: AtBRCC36B, BRCC36B \| BRCA1/BRCA2-containi...	[more]
\|	2.700e-45	79.31	Symbols: AtBRCC36B, BRCC36B \| BRCA1/BRCA2-containi...	[more]
\|	7.091e-7	26.81	Symbols: CSN5B, CSN5, AJH2 \| COP9-signalosome 5B \|...	[more]
\|	7.952e-7	26.09	Symbols: CSN5A, AJH1 \| ARABIDOPSIS JAB1 HOMOLOG 1,...	[more]
\|	9.230e-7	26.15	Symbols: CSN5A, AJH1 \| ARABIDOPSIS JAB1 HOMOLOG 1,...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1
Date Performed: 2024-05-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	PFAM	PF01398	JAB	coord: 3..101 e-value: 4.1E-11 score: 54.1
None	No IPR available	GENE3D	3.40.140.10	Cytidine Deaminase, domain 2	coord: 1..148 e-value: 1.1E-42 score: 147.2
None	No IPR available	SUPERFAMILY	102712	JAB1/MPN domain	coord: 5..117
IPR050242	JAMM/MPN+ metalloenzymes, peptidase M67A	PANTHER	PTHR10410	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED	coord: 4..147
IPR037518	MPN domain	PROSITE	PS50249	MPN	coord: 6..135 score: 23.185814

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr4:30035032..30035812-
coding sequence from alignment at Chr4:30035032..30035812-

mRNA sequence

>Va04G047320.1_Jingnong6 ID=Va04G047320.1_Jingnong6; Name=Va04G047320.1; organism=Vigna angularis; type=mRNA; length=540bp
ATGTCGCTAACGAGCGTGAAAATGTCGGAAGAAGTGTGGTTAAGTTGCCT
CACTCATGCATTGTCCACTGAAACCGAAGAGATTATGGGTCTTCTTTTTG
GGGACATTCAGAAGAGGTCTGATCGGCGAAAGGATCGAGTGGAAACCGAC
CCTGAGCTCTTGGCCGCTGCAATTGCCCTCGCTGAGCGAATGACCATAGC
CACTGGAACTACGACAAGGGTAATTGGTTGGTACCATTCACACCCGCACA
TTACAGTTCTCCCTTCCCATGTTGATGTAAAAACCCAGGCAACGTACCAG
CTTCTTGACTCTGGATTTATTGGCTTGATTTTTTCTTGTTTCAGTGAAGA
TGTAAACAAGGTTGGAAGAATTCAAGTAATTGCTTTCCAGTCATATGATG
GGAGGCAGAATCAGTTATCAGGACCTATACCTTTATCTCTTGTAAATAGA
AGCCCTATTATCGATATCGATTCATCGCCAAGTTCTTCAGAGAATTTATC
AATAAGACATGGTTACTTCAAGGCAGAGAGCTCTTTGTAG

protein sequence of Va04G047320.1_Jingnong6

>Va04G047320.1_Jingnong6 ID=Va04G047320.1_Jingnong6; Name=Va04G047320.1_Jingnong6; organism=Vigna angularis; type=polypeptide; length=179bp
MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQKRSDRRKDRVETD
PELLAAAIALAERMTIATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQ
LLDSGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNR
SPIIDIDSSPSSSENLSIRHGYFKAESSL

mRNA from alignment at Chr4:30035032..30035812-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Va04G047320.1_Jingnong6 ID=Va04G047320.1_Jingnong6; Name=Va04G047320.1; organism=Vigna angularis; type=mRNA; length=781bp; location=Sequence derived from: Chr4:30035032..30035812- (Vigna angularis
ATGTCGCTAACGAGCGTGAAAATGTCGGAAGAAGTGTGGTTAAGTTGCCT
CACTCATGCATTGTCCACTGAAACCGAAGAGATTATGGGTCTTCTTTTTG
GGGACATTCAGGTAATCTGACCTAACATTTCTTTCTATGTTATCGAGTCA
ATTGAAGAAACGCATAGACACAATACCAGGTTCGATTAATGATTTTTATG
GGTTGGGTTGATTCAACATTCGAAAAACGGGAACGTGATTGCATTGATAT
GGGGGGCGTCTCCTTAGAAGAGGTCTGATCGGCGAAAGGATCGAGTGGAA
ACCGACCCTGAGCTCTTGGCCGCTGCAATTGCCCTCGCTGAGCGAATGAC
CATAGCCACTGGAACTACGACAAGGGTAATTGGTTGGTACCATTCACACC
CGCACATTACAGTTCTCCCTTCCCATGTTGATGTAAAAACCCAGGCAACG
TACCAGCTTCTTGACTCTGGATTTATTGGCTTGATTTTTTCTTGTTTCAG
TGAAGATGTAAACAAGGTTTGTCTTCAATGCATGGCCAAAAGATTCTTCA
ATTGTAAATTTTCTTTAAGTTTATCGTCAAATACCTCTGGGTTGTGTTCA
GGTTGGAAGAATTCAAGTAATTGCTTTCCAGTCATATGATGGGAGGCAGA
ATCAGTTATCAGGACCTATACCTTTATCTCTTGTAAATAGAAGCCCTATT
ATCGATATCGATTCATCGCCAAGTTCTTCAGAGAATTTATCAATAAGACA
TGGTTACTTCAAGGCAGAGAGCTCTTTGTAG

Coding sequence (CDS) from alignment at Chr4:30035032..30035812-

>Va04G047320.1_Jingnong6 ID=Va04G047320.1_Jingnong6; Name=Va04G047320.1; organism=Vigna angularis; type=CDS; length=540bp; location=Sequence derived from: Chr4:30035032..30035812- (Vigna angularis
ATGTCGCTAACGAGCGTGAAAATGTCGGAAGAAGTGTGGTTAAGTTGCCT
CACTCATGCATTGTCCACTGAAACCGAAGAGATTATGGGTCTTCTTTTTG
GGGACATTCAGAAGAGGTCTGATCGGCGAAAGGATCGAGTGGAAACCGAC
CCTGAGCTCTTGGCCGCTGCAATTGCCCTCGCTGAGCGAATGACCATAGC
CACTGGAACTACGACAAGGGTAATTGGTTGGTACCATTCACACCCGCACA
TTACAGTTCTCCCTTCCCATGTTGATGTAAAAACCCAGGCAACGTACCAG
CTTCTTGACTCTGGATTTATTGGCTTGATTTTTTCTTGTTTCAGTGAAGA
TGTAAACAAGGTTGGAAGAATTCAAGTAATTGCTTTCCAGTCATATGATG
GGAGGCAGAATCAGTTATCAGGACCTATACCTTTATCTCTTGTAAATAGA
AGCCCTATTATCGATATCGATTCATCGCCAAGTTCTTCAGAGAATTTATC
AATAAGACATGGTTACTTCAAGGCAGAGAGCTCTTTGTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000555	JAMM/MPN+_dom
IPR050242	JAMM_MPN+_peptidase_M67A
IPR037518	MPN

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008233	peptidase activity
GO:0008237	metallopeptidase activity

Search form