Va05G047940.1

Transcript Overview
NameVa05G047940.1
Unique NameVa05G047940.1_Jingnong6
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length423
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr5chromosomeChr5:28272364..28277818 +Vigna angularis cv. Jingnong6 genome v1.7.1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjavjL049Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjavjL264Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjL0130Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anavjL0326Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjcanR544Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcanR586Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaR611Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anavjL0633Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjcaR632Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
avjcaR652Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
avjccR1085Cajanus cajan Asha genome v1.0Cajanus cajan
avjccR1087Cajanus cajan Asha genome v1.0Cajanus cajan
avjccR1097Cajanus cajan Asha genome v1.0Cajanus cajan
anavjL0761Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anavjL0995Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anavjL1084Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anavjL1169Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anavjL1247Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjpsR640Pisum sativum Cameor genome v1aPisum sativum
avjpsR644Pisum sativum Cameor genome v1aPisum sativum
avjpsR660Pisum sativum Cameor genome v1aPisum sativum
avjpvR650Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
avjpvR661Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
avjvfhR665Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjpvR669Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
avjvfhR687Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjvfhR702Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjvfhR712Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjvrvR504Vigna radiata cv. VC1973A genome v6.0Vigna radiata
avjvrvR515Vigna radiata cv. VC1973A genome v6.0Vigna radiata
avjvuR500Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvuR505Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvuR515Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvssR698Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvssR719Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvssR746Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvssR767Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjcarR595Cicer arietinum
avjcarR624Cicer arietinum
avjccaR610Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjvumR539Vigna umbellata FF25 genome v1.0Vigna umbellata
avjvumR546Vigna umbellata FF25 genome v1.0Vigna umbellata
avjvumR555Vigna umbellata FF25 genome v1.0Vigna umbellata
avjccaR620Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjccaR622Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjccaR626Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjvvaR657Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvvaR696Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvasR520Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvasR527Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvasR539Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvstR547Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvstR555Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvstR569Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvunR432Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
avjvunR443Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
avjpvfR655Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
avjpvfR664Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
avjpvfR673Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.005G124000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_022373Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun11g126900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vfaba.Hedin2.R1.6g019400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun05g236300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-KK1_034640Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_022779738.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vum_06G01085.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun05g236300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigst.07G055800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigst.06G148700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
jg7748.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Ca_16488Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_004506121.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vum_07G00595.1Vigna umbellata FF25 genome v1.0Vigna umbellata
PvulFLAVERTChr05.815Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_09556.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun11g126900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.011G094200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr11.1000595Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-TanjilR_01310Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigan.07G073600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va08G059030.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.06G166000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Va05G047940Va05G047940_Jingnong6Vigna angularisgene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va05G047940.1:five_prime_UTR_1_Jingnong6Va05G047940.1:five_prime_UTR_1_Jingnong6Vigna angularisfive_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va05G047940.1:exon_1_Jingnong6Va05G047940.1:exon_1_Jingnong6Vigna angularisexon
Va05G047940.1:exon_2_Jingnong6Va05G047940.1:exon_2_Jingnong6Vigna angularisexon
Va05G047940.1:exon_3_Jingnong6Va05G047940.1:exon_3_Jingnong6Vigna angularisexon
Va05G047940.1:exon_4_Jingnong6Va05G047940.1:exon_4_Jingnong6Vigna angularisexon
Va05G047940.1:exon_5_Jingnong6Va05G047940.1:exon_5_Jingnong6Vigna angularisexon
Va05G047940.1:exon_6_Jingnong6Va05G047940.1:exon_6_Jingnong6Vigna angularisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va05G047940.1_Jingnong6-cdsVa05G047940.1_Jingnong6-cds-Chr5_Jingnong6:28272600..28272698Vigna angularisCDS
Va05G047940.1_Jingnong6-cdsVa05G047940.1_Jingnong6-cds-Chr5_Jingnong6:28272773..28272823Vigna angularisCDS
Va05G047940.1_Jingnong6-cdsVa05G047940.1_Jingnong6-cds-Chr5_Jingnong6:28272917..28272968Vigna angularisCDS
Va05G047940.1_Jingnong6-cdsVa05G047940.1_Jingnong6-cds-Chr5_Jingnong6:28273699..28273757Vigna angularisCDS
Va05G047940.1_Jingnong6-cdsVa05G047940.1_Jingnong6-cds-Chr5_Jingnong6:28276937..28276982Vigna angularisCDS
Va05G047940.1_Jingnong6-cdsVa05G047940.1_Jingnong6-cds-Chr5_Jingnong6:28277392..28277507Vigna angularisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va05G047940.1:three_prime_UTR_1_Jingnong6Va05G047940.1:three_prime_UTR_1_Jingnong6Vigna angularisthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Va05G047940.1_Jingnong6Va05G047940.1_Jingnong6Vigna angularispolypeptide
Va05G047940.1_Jingnong6Va05G047940.1_Jingnong6-proteinVigna angularispolypeptide


Homology
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SGZ7|A0A0S3SGZ7_PHAAN (Transmembrane protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G073600 PE=4 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 4.298e-99
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140
            MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK
Sbjct:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140          
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0JE88|A0A8T0JE88_PHAAN (Transmembrane protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0216860 PE=4 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 5.006e-97
Identity = 140/144 (97.22%), Postives = 140/144 (97.22%), Query Frame = 0
Query:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLV----MPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140
            MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLV    MPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK
Sbjct:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVSNAVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 144          
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0EWD2|A0A3Q0EWD2_VIGRR (Uncharacterized protein LOC106758629 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106758629 PE=4 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 7.562e-97
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0
Query:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140
            MQH DNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLW VSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPS+NENIQKSIK
Sbjct:    1 MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 140          
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0EUR3|A0A3Q0EUR3_VIGRR (Uncharacterized protein LOC106758629 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106758629 PE=4 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 9.931e-95
Identity = 137/144 (95.14%), Postives = 138/144 (95.83%), Query Frame = 0
Query:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLV----MPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140
            MQH DNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLW VSPLIRDSFSMIGSAVGGTASAFYGFNLV    MPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPS+NENIQKSIK
Sbjct:    1 MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVSNAVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 144          
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|V7BYF3|V7BYF3_PHAVU (Transmembrane protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G124000g PE=4 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 4.980e-85
Identity = 124/140 (88.57%), Postives = 127/140 (90.71%), Query Frame = 0
Query:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140
            MQHSDN ME SKLSNS QNIRCHHCAGPLSNRMETS WTVSPLIRDSFSMIGSAVGGT SAFYGFNLVMPIVQRRIKGPMWLHF IGAPPVIVFSSACAGL GGA+PAAAQLVSSSYHAAY     PPPS++E IQKSIK
Sbjct:    1 MQHSDNEMEASKLSNSIQNIRCHHCAGPLSNRMETSHWTVSPLIRDSFSMIGSAVGGTTSAFYGFNLVMPIVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSSYHAAY-----PPPSKDEYIQKSIK 135          
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|C6TB57|C6TB57_SOYBN (Transmembrane protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 1.682e-78
Identity = 114/136 (83.82%), Postives = 122/136 (89.71%), Query Frame = 0
Query:    5 DNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140
            ++ ME SKLS+S QN+RCHHCAGPLS  METS WTVSPLIRDSFSMIGSAVGG ASAFYGFNLVMPIVQRRIKGPMWLHF IGAPPVIVFSSACAGL GGA+PAAAQLVSS YHAAY  PT PPPS++ENIQ+S K
Sbjct:    3 NSAMEASKLSSSDQNVRCHHCAGPLSKDMETSHWTVSPLIRDSFSMIGSAVGGVASAFYGFNLVMPIVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSFYHAAYFFPTSPPPSKDENIQRSRK 138          
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151RMW4|A0A151RMW4_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_034640 PE=4 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.986e-73
Identity = 106/122 (86.89%), Postives = 116/122 (95.08%), Query Frame = 0
Query:   19 NIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140
            +IRCHHCAGPLSN+MET+ WTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMP+VQRRIKGPMWLHF IGAPPVIVFSSACAGL GGA+PAAAQLVSSSY+AAYS+ T+PPPS++ NIQKS K
Sbjct:   14 DIRCHHCAGPLSNQMETTHWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPVVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSSYNAAYSTSTLPPPSKDGNIQKSRK 135          
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8K979|A0A8B8K979_ABRPR (Uncharacterized protein LOC113853839 OS=Abrus precatorius OX=3816 GN=LOC113853839 PE=4 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.510e-72
Identity = 109/137 (79.56%), Postives = 117/137 (85.40%), Query Frame = 0
Query:    8 METSKLSNST----QNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140
            M  SK SNS     QNIRCHHCAGPLS  MET+ WTV P IRDSFSMIGSAVGGTASAFYGFN VMP+V+R +KGPMWLHF IGAPPVIVFSSACAGL GGA+PA AQLVSSSYHAA+SSPT+ PPSE+ENIQKS K
Sbjct:    1 MGASKPSNSQSSPYQNIRCHHCAGPLSKDMETTQWTVPPFIRDSFSMIGSAVGGTASAFYGFNHVMPVVRRSVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAAFSSPTLAPPSEDENIQKSRK 137          
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5N6RG49|A0A5N6RG49_9ROSI (Gb protein OS=Carpinus fangiana OX=176857 GN=FH972_016430 PE=4 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.566e-68
Identity = 98/125 (78.40%), Postives = 109/125 (87.20%), Query Frame = 0
Query:   14 SNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKS 138
            S  + N+RCHHCAGPLS  METS WTV PLIRDSFSMIGSAVGGT SAFYGFN VMPIV+RR+KGPMWLHF IGAPPVIVFSSACAGL GGA+PA AQL SSSYHAA +SP++PPPS++E + KS
Sbjct:    4 SKPSINMRCHHCAGPLSKEMETSRWTVPPLIRDSFSMIGSAVGGTTSAFYGFNHVMPIVRRRVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPALAQLASSSYHAAITSPSLPPPSQDEKMHKS 128          
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A836DIM5|A0A836DIM5_9ROSI (MOB kinase activator OS=Salix suchowensis OX=1278906 GN=IMY05_016G0018800 PE=4 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 2.105e-67
Identity = 99/132 (75.00%), Postives = 114/132 (86.36%), Query Frame = 0
Query:    7 NMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKS 138
            +M  SK SN   ++RCHHCAGPL+  METS WTV PLIRDSFSMIGSAVGGT SAFYGFN VMP+V+R +KGPMWLHFFIGAPPVIVFSSACAGL GGA+PA AQL SSSYHAA+S+P++PPPS+++  QKS
Sbjct:    5 SMPESK-SNPQNSLRCHHCAGPLTKEMETSQWTVRPLIRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRWVKGPMWLHFFIGAPPVIVFSSACAGLAGGAVPALAQLASSSYHAAFSAPSLPPPSQDDKRQKS 135          
BLAST of Va05G047940.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:6033797-6035216 FORWARD LENGTH=133)

HSP 1 Score: 177.178 bits (448), Expect = 3.604e-58
Identity = 84/120 (70.00%), Postives = 93/120 (77.50%), Query Frame = 0
Query:   19 NIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKS 138
             IRCHHCAGPL+  +ETS WTV P IRDSFSMIGSAVGGTASAF GFN  MPIV++ IKGPMWLHF +GAPPVIV SSACAGL GG +PA AQL SSSY AA  S   P   ++  +QKS
Sbjct:    9 EIRCHHCAGPLTRNLETSKWTVDPFIRDSFSMIGSAVGGTASAFIGFNHAMPIVRKWIKGPMWLHFLVGAPPVIVLSSACAGLAGGTVPALAQLASSSYRAAVHSSQPPQAQKDNKMQKS 128          
BLAST of Va05G047940.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:1047754-1049026 FORWARD LENGTH=138)

HSP 1 Score: 175.252 bits (443), Expect = 2.334e-57
Identity = 85/127 (66.93%), Postives = 104/127 (81.89%), Query Frame = 0
Query:   10 TSKLSNSTQNI--RCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENEN 134
            ++ +++S + I  RCHHCAGPL+  +ET+ WTV+P IRDSFSMIGSAVGGTASAF GF+ VMPIV++ IKGPMWLHF +GAPPVIV SSACAGL GGA+PA AQL SSSYHAA  S + PP  +++N
Sbjct:    2 SATMADSGKEIGSRCHHCAGPLTKNLETNEWTVAPFIRDSFSMIGSAVGGTASAFIGFHHVMPIVRKWIKGPMWLHFLVGAPPVIVVSSACAGLAGGAVPALAQLASSSYHAAVHS-SQPPQGQDKN 127          
BLAST of Va05G047940.1 vs. Araport11
Match: | (Symbols: RED1 | Retarded Embryo Development 1 | chr2:17511071-17512898 REVERSE LENGTH=158)

HSP 1 Score: 71.2478 bits (173), Expect = 2.895e-16
Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   21 RCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQL 112
            RC  C   L+   E   WT++P++ D+ ++ GS +GG  SA + FN  +P +Q R  G   L F +G P ++V+S   A   G A+P  AQL
Sbjct:   30 RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAFGGYALPKFAQL 121          
BLAST of Va05G047940.1 vs. Araport11
Match: | (Symbols: RED1 | Retarded Embryo Development 1 | chr2:17509933-17512898 REVERSE LENGTH=166)

HSP 1 Score: 70.8626 bits (172), Expect = 4.326e-16
Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   21 RCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQL 112
            RC  C   L+   E   WT++P++ D+ ++ GS +GG  SA + FN  +P +Q R  G   L F +G P ++V+S   A   G A+P  AQL
Sbjct:   30 RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAFGGYALPKFAQL 121          
BLAST of Va05G047940.1 vs. Araport11
Match: | (Symbols: RED1 | Retarded Embryo Development 1 | chr2:17509933-17512898 REVERSE LENGTH=204)

HSP 1 Score: 61.2326 bits (147), Expect = 4.430e-12
Identity = 31/89 (34.83%), Postives = 49/89 (55.06%), Query Frame = 0
Query:   21 RCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAA 109
            RC  C   L+   E   WT++P++ D+ ++ GS +GG  SA + FN  +P +Q R  G   L F +G P ++V+S   A   G ++ AA
Sbjct:   30 RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAF-GESLQAA 117          
The following BLAST results are available for this feature:
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3SGZ7|A0A0S3SGZ7_PHAAN4.298e-99100.00Transmembrane protein OS=Vigna angularis var. angu... [more]
tr|A0A8T0JE88|A0A8T0JE88_PHAAN5.006e-9797.22Transmembrane protein OS=Phaseolus angularis OX=39... [more]
tr|A0A3Q0EWD2|A0A3Q0EWD2_VIGRR7.562e-9797.86Uncharacterized protein LOC106758629 isoform X2 OS... [more]
tr|A0A3Q0EUR3|A0A3Q0EUR3_VIGRR9.931e-9595.14Uncharacterized protein LOC106758629 isoform X1 OS... [more]
tr|V7BYF3|V7BYF3_PHAVU4.980e-8588.57Transmembrane protein OS=Phaseolus vulgaris OX=388... [more]
tr|C6TB57|C6TB57_SOYBN1.682e-7883.82Transmembrane protein OS=Glycine max OX=3847 PE=2 ... [more]
tr|A0A151RMW4|A0A151RMW4_CAJCA2.986e-7386.89Uncharacterized protein OS=Cajanus cajan OX=3821 G... [more]
tr|A0A8B8K979|A0A8B8K979_ABRPR2.510e-7279.56Uncharacterized protein LOC113853839 OS=Abrus prec... [more]
tr|A0A5N6RG49|A0A5N6RG49_9ROSI9.566e-6878.40Gb protein OS=Carpinus fangiana OX=176857 GN=FH972... [more]
tr|A0A836DIM5|A0A836DIM5_9ROSI2.105e-6775.00MOB kinase activator OS=Salix suchowensis OX=12789... [more]
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BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Va05G047940.1 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
|3.604e-5870.00Symbols: no symbol available | no full name availa... [more]
|2.334e-5766.93Symbols: no symbol available | no full name availa... [more]
|2.895e-1636.96Symbols: RED1 | Retarded Embryo Development 1 | ch... [more]
|4.326e-1636.96Symbols: RED1 | Retarded Embryo Development 1 | ch... [more]
|4.430e-1234.83Symbols: RED1 | Retarded Embryo Development 1 | ch... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1
Date Performed: 2024-05-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34459OS01G0264500 PROTEINcoord: 6..138

Sequences
The following sequences are available for this feature:

mRNA sequence

>Va05G047940.1_Jingnong6 ID=Va05G047940.1_Jingnong6; Name=Va05G047940.1; organism=Vigna angularis; type=mRNA; length=423bp
ATGCAGCACAGTGATAATAACATGGAAACCTCCAAACTCAGTAACAGTAC
TCAAAATATTCGATGCCATCACTGCGCAGGACCCCTTTCAAACCGCATGG
AAACTAGTCTCTGGACCGTTTCGCCTCTCATCAGGGATAGCTTCTCTATG
ATTGGTTCTGCCGTTGGCGGCACGGCGAGTGCATTTTATGGATTCAATCT
TGTTATGCCAATTGTCCAGAGAAGAATAAAAGGACCCATGTGGTTGCATT
TTTTCATTGGTGCACCCCCTGTGATAGTATTCTCTTCAGCATGCGCAGGA
CTGACAGGTGGTGCTATTCCTGCTGCGGCACAACTTGTTTCCTCCTCTTA
TCATGCAGCATACTCATCTCCTACCGTACCTCCGCCATCAGAGAATGAAA
ATATTCAAAAGTCAATAAAATGA
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protein sequence of Va05G047940.1_Jingnong6

>Va05G047940.1_Jingnong6 ID=Va05G047940.1_Jingnong6; Name=Va05G047940.1_Jingnong6; organism=Vigna angularis; type=polypeptide; length=140bp
MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSM
IGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAG
LTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK
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mRNA from alignment at Chr5:28272364..28277818+

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Va05G047940.1_Jingnong6 ID=Va05G047940.1_Jingnong6; Name=Va05G047940.1; organism=Vigna angularis; type=mRNA; length=5455bp; location=Sequence derived from: Chr5:28272364..28277818+ (Vigna angularis
CTAAATAATAAAATTAAAAGATTTCTTTTTTCAAATTTTTCCTTTTCACT TTATAAATAATTTCTGTTATCTCTTCTAGCCCTGTTTACCTTTTTCGTTC TATTCTCTGCTTCGAATTTTTGCAGTCGATTTGTATAGTTTGTTTCTTTG CACAACCAAGACCACGTGTGCGTTCCTGGTCTAGTAGTAGTACGAATCAG AGAGAGGGTTCTTCTGTGCTGATTAGGTTAAGCTGTATGCAGCACAGTGA TAATAACATGGAAACCTCCAAACTCAGTAACAGTACTCAAAATATTCGAT GCCATCACTGCGCAGGACCCCTTTCAAACCGCATGGTATATTTCTTCCCA ATAATTGTTATTATTCTTTTATCTCTTTCTCTCTTACCAATTTCATTCCT TTGATTCAGGAAACTAGTCTCTGGACCGTTTCGCCTCTCATCAGGGATAG CTTCTCTATGGTGAATTATTCTCACCCATTTAGTTTATTTCTTCGATATC TATGTGGGTGTGCGAAATTTCTGATCTTTGTTTTTGGGGTTGAACATTTT CAGATTGGTTCTGCCGTTGGCGGCACGGCGAGTGCATTTTATGGATTCAA TCTTGGTATACACTCTTGCTTCTCATTTTTTGGTTATTTTTTGAAAAAGC TTGCTAAGATTCTCTGAAATTAAAGGGGGTAATGCATGGTGATCAGTTGC AGACTGTTATTTGGAAATAGGAACACTATGTATGTATAGAAGTGCTTTGT CCATCATGTCTATGTTAAATATCCATTTAACTGGTGTTGAATGTGTTTCC ATACACAGCTGAAGTTTGAGTGGTTTGCAAACTTTATTTGTGGTAACTGT TTACCTTCCAAACTGTAGAATGTTAATTTTTCATAGGTTTAATTAATCAT TTGTTCCTACATAACCTTTTGTATTTGTTCCTATATCTAAAAGCTCTATA TTTTAGTCTTATACAAGCATTTGTTTTTGTTTTAACCCTTGTTAGCTTTC TGACAGTATAAAATTGTCTCAAAATGTGGTATAAAGACTAAAATTTAAGA GAAGAATCGCCGTGTGTAGGTACTGAAACATAGAATTTTAGATATAGGGA CTAAAACGAAAACTTGGCACAAATGTTAGGATCAAATGATTAATGAAACC TTTTTAATATTTAGAAACTAAACTATTTTGTTTTTTACTTAGCATGAAAC TCTATACGTATATATTTTTGCTTACTTTCTTAGATGATTGCAACATTACA CTGAATCTTTTGTCCGTGAAGACTGCTTGTTTTATGTATTTAACATATTC AGATTTCCGAAGTAATTTTTTGTTGTCCAATGCAGTTATGCCAATTGTCC AGAGAAGAATAAAAGGACCCATGTGGTTGCATTTTTTCATTGGTGTAAGT TCATTGTTTATATATATATATATATATATATATATATATATATATATATA TATATATATATATATATCTGTTGCTTTTAGTTTTTGTTCGTTGTTTTTTT TGCTTTTCATAACACTAGTTCATGGTTTTTCCCCGTATTCAATGCTTAGG AGATGTAAATCTTTGAATAGTTAACTCTGAGTATAACTTCAGCTCGTCAT ATTATGTTCTTTTAAATAGTTATGAACTTTGACATTTCCTTTCTTCTTTA ATAAGAAATCAGGGAAAGATTATTAACCAAGAGACTGCACTTCTTTCTTG TTAACCTTCTAATAAACTGACGCTGTACTGTAGTTGGCAAAGTTATGTAA ATTCTTAAATGTACAAAGTTAAACCATTTGTCCCCTAACTAATTCTCGCT AGCTATTGAAATTATTCTATATCTGTGACATCATGAGACAGTTAACTGAT ACTATAACCCTGTAACTTTCATACACTGGTAAAGGTACAGCCCTCGTGAC CCAGACTCCTTTGCTTTCTCTGATGATCTGAACACATTTTGTCATTTTAA ATAGAAGTGAGATGACTTATATCATTTTATTATCTGCAAAAGAATCATAA AGTATAAATAGAACTTAAAACAGGAGAATTCACTGATTATTAGTTAATTC TGGTTGTGTTTTCTACTTACAGAATTCTTTGATGGCTAAGTTTTGAACCA GATAGATAGTTTATTTTCAGTAAACAAAAGGGGAAACAATATTGTTGGGA AGAGTTATGGGAGGGTTTGGCTTTTGTTATGTTCTTGAAGCGGCTTCTAA AAGTTACCTTTCTCCATCCACTTTGAACTCTTTTTTATGAAAAATTTTGT TCACAATTTCTAAAACTGCTGGTGTTGTTTGTCTGCACCATCTTGGATCA TCATTGTTTTCCATTTTGTATCAGTCTTGTTTTGGTGCATACATCATTGG TTGGTTTCCAGGTAAACAAGATTAGTATTTTTCTATTACCTGTAAATTCA GCTGGACCCATTCTTCTCCGTCTAATTGTGTAATTTGTGCCATTGGGGGC ATTCATAGTATATTTTGCAATATCATCGGGAAAGAATTAAGCTTCTTAGA TGATGAAGCATCTTAGAGTTTTTCACTAATAAGTTGTGTTGAATATAGTG AAAAACTATATTTAGATTAATCTCCCTTGTGTAAAATACACACATAGGGT TCTCTATTTATAATAGAAGAAATATGGACTAAGCCCAAAATACAAATGAG AAATAATAACAAACCAACTAAAAGATAAAAGATAATATATCTAACACTCC CCCTCAAGCTGGAGCATACAAATTGTATGAACTAAGCTTGGAATAGATGA ACTCAGTGTTAAACTAGATGATTTGTCTTCAAGAGTGTGAGGCAAACATA GATGAACTAACAGCAGCTTGTGAAACTTCAACTTCAAAAGTGGATGAAGG AAAGCAGTGGTGGACAATGACAATCTGCAAGGACTGATTCCCAATCAATG ATGGATGAGTGACGGGATCAACAGTGGTAGCTGAAAGCTAAGAGCTACAA AACTGCAGGGACTACACTAAATTCTCATCAATGATGGATGGGTGACGGGA TCAACAGTAGTAGCTGAAATCTACAAAACTGCAGGGACTACACCCATATA TATGTGACTTGACTTGCAGTGTCTTGGAAACGTACTCCCCCTCAGTGTGA CGGCGGAAATGTGGAATATCACAGTTGCTGGACCACTAAAACAAAACAAA ATATTAAGCTACAATGCTGAAACAAAGACATCAAAGATCCAAAGATACGT TGGAGGTCCAAAATTCTTTGCTGGACAACTCCCAAGTGGTGATACTTAGC CGTGTATCACAAGAAGATCGGGCTAAACTCTAGCCCAAGAAGAACTGACG CAATTGCGTCTGTCTGAGGCGATAGCGACTGTAGCGGCGGTTGACTGCTA TAAAACTGTAGGGACTAAATTGCCATCACTGACTGATGGGGCCTGTAGTG GCGGGAAGCGACAAAACTACAGGGACTGCCATCACTAACTGACGAGGTGA TGGGGGCCTACCGTGGTTGGAAGCATACGGTGCTTGGACAGCGGCAAACG GCGCGGGACAGCGGGAAACGGCGCGGGACAGCGGGAAACGGCGCGGGACA GCGGGAAACGGCGCGGGACAGCGGGAAACGGTGCGGGACAGCGGGAAACG GCGCGGGACAGCGGCAAACGGCGCGGGACAGCGGCAAACGATGCCTGTAC AATGGAAAACGGTGCTGGAACGACATCAGCAGCTGAGACGAAGCACACAA CGCAGAAAGGAAGGTCCGACAATGCGGAACGTGCGGCGAGATGAAGATGC TTTGAAGACAGACGAAGATGGCAGCAATGGCTGCTCTGGAAGGTCTGAAC AGAGAGAGGGAGGTCCGGCGAGACAACCGGAAGCGTCGCGGTTTGATGCC GATGCTGGGAAGGCGGCGCGTGACGGAGCGTGGGAAAGAGTCAGACGCCG GCACCGGTGGGGTTGGTCGTCGCGTGAAGAGGCGAACCAGATGCAGTGGT CGCCGGACGGAATTGTGACGGTGGCCGGCGACAAGGCGGCGGCGGACTGG CCGGAAAGAAGCGCTGCGTGGCGGCGCGTGACTGATAGGTGGCTCTCGAA ACCGGCGTGGTTGGCCGTCGCTCGAAGAGACGGTCCAGATCCGCAGGTCA CCCGTCGAATCTGTGACGGTGGCCGGCGGTAGCGGCGGCGACGGTGGCCG GAGTTAGCAGTGACGGCAGCGGAAAGTGGCGGCGACAGCAGTGGCACACT GGGTCTGGACTGGTGCTGACTGTGGCAAAGATTTAAGAAGAAAAGTGGAC TGCCCACTAAGATTTTAGGGGCTGCCGGCAGACAGCAGAGACCACCAAAA GAGGATCAGAGAACTTGCTCTGATACCATGTTGAATATAGTGAAAAACTA TATTTAGATTAATCTCCCTTGTGTAAAATACACACATAGGGTTCTCTATT TATAATAGAAGAAATATGGGCTAAGCCCAAAATACAAATGAGAAATAATA ACAAACCAACTAAAAGATAAAAGATAATATATCTAACAAGTTGTACGTTT GAATACTGTGTTCCTTCTTAATGCAGTCAAAACATTTTTACCATCTTATT GACATAACTTCTCTGTAATTCAGGCACCCCCTGTGATAGTATTCTCTTCA GCATGCGCAGGACTGACAGGTGAGTTCTGAATTTGATGTTTTTTGCTGGC ATGTGTATAATACTCCTTCTGTGTTCTGTTTTCTGAATTCGTAACTCTGT AGGGAAAGTTTTGGGAAAACAAAAAACACCTACAAGACTTAGTTGCGTTG AGAACTAAAAAACTTTTATGACAACACCTACTTAAAATGTTTTCTGTTTC TATGGAGTGCTAGCCATTCTATTTGTACATTTGAATAGTCTAGATTCTTG ATTGAAACCGTGAACTTATTATTTTTTATTGCGTTAATTATTGAAGAATC ATAACCTGTGTTTATCATGTTATCATCTGACAATTCAATTCAATTCAAGT ATTGGAAGTCTTCATTTATAGCAGGACAAAGGGTGAAGTTTGTTTCATGC TGATAAAAGTTTCATTGACATAATGCAGGTGGTGCTATTCCTGCTGCGGC ACAACTTGTTTCCTCCTCTTATCATGCAGCATACTCATCTCCTACCGTAC CTCCGCCATCAGAGAATGAAAATATTCAAAAGTCAATAAAATGAGATAAT TGCTTTCATCATAATGTGTGTGCTGATGAGAGTTTTGTTTTTTTACCTGT GTAAATACTGCTCCATGATTTCTGTGATTTCTTTTTATCTTACAACACAT AGGTAGTGTTTCACAATGTAATTTCAGTTCATATGAACCAGTTGCTTAGA TTAGAGAGATATACCGGGAATTCACTTTGGTAATAACTTAATTAGAGGGA AGTATATAATGTAATCACGCCGTTGTCTTACATTTCCATTCGAGTACCAT AAGATTTTAATAAAGACTTTTCTAGAAAAAATAAATAAAAATTAAGATTA GTTTA
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Coding sequence (CDS) from alignment at Chr5:28272364..28277818+

>Va05G047940.1_Jingnong6 ID=Va05G047940.1_Jingnong6; Name=Va05G047940.1; organism=Vigna angularis; type=CDS; length=423bp; location=Sequence derived from: Chr5:28272364..28277818+ (Vigna angularis
ATGCAGCACAGTGATAATAACATGGAAACCTCCAAACTCAGTAACAGTAC
TCAAAATATTCGATGCCATCACTGCGCAGGACCCCTTTCAAACCGCATGG
AAACTAGTCTCTGGACCGTTTCGCCTCTCATCAGGGATAGCTTCTCTATG
ATTGGTTCTGCCGTTGGCGGCACGGCGAGTGCATTTTATGGATTCAATCT
TGTTATGCCAATTGTCCAGAGAAGAATAAAAGGACCCATGTGGTTGCATT
TTTTCATTGGTGCACCCCCTGTGATAGTATTCTCTTCAGCATGCGCAGGA
CTGACAGGTGGTGCTATTCCTGCTGCGGCACAACTTGTTTCCTCCTCTTA
TCATGCAGCATACTCATCTCCTACCGTACCTCCGCCATCAGAGAATGAAA
ATATTCAAAAGTCAATAAAATGA
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