Va05G047940.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SGZ7|A0A0S3SGZ7_PHAAN (Transmembrane protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G073600 PE=4 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 4.298e-99 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 Query: 1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK Sbjct: 1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0JE88|A0A8T0JE88_PHAAN (Transmembrane protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0216860 PE=4 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 5.006e-97 Identity = 140/144 (97.22%), Postives = 140/144 (97.22%), Query Frame = 0 Query: 1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLV----MPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLV MPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK Sbjct: 1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVSNAVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 144
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0EWD2|A0A3Q0EWD2_VIGRR (Uncharacterized protein LOC106758629 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106758629 PE=4 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 7.562e-97 Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0 Query: 1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140 MQH DNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLW VSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPS+NENIQKSIK Sbjct: 1 MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 140
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0EUR3|A0A3Q0EUR3_VIGRR (Uncharacterized protein LOC106758629 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106758629 PE=4 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 9.931e-95 Identity = 137/144 (95.14%), Postives = 138/144 (95.83%), Query Frame = 0 Query: 1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLV----MPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140 MQH DNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLW VSPLIRDSFSMIGSAVGGTASAFYGFNLV MPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPS+NENIQKSIK Sbjct: 1 MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVSNAVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 144
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|V7BYF3|V7BYF3_PHAVU (Transmembrane protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G124000g PE=4 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 4.980e-85 Identity = 124/140 (88.57%), Postives = 127/140 (90.71%), Query Frame = 0 Query: 1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140 MQHSDN ME SKLSNS QNIRCHHCAGPLSNRMETS WTVSPLIRDSFSMIGSAVGGT SAFYGFNLVMPIVQRRIKGPMWLHF IGAPPVIVFSSACAGL GGA+PAAAQLVSSSYHAAY PPPS++E IQKSIK Sbjct: 1 MQHSDNEMEASKLSNSIQNIRCHHCAGPLSNRMETSHWTVSPLIRDSFSMIGSAVGGTTSAFYGFNLVMPIVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSSYHAAY-----PPPSKDEYIQKSIK 135
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|C6TB57|C6TB57_SOYBN (Transmembrane protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 1.682e-78 Identity = 114/136 (83.82%), Postives = 122/136 (89.71%), Query Frame = 0 Query: 5 DNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140 ++ ME SKLS+S QN+RCHHCAGPLS METS WTVSPLIRDSFSMIGSAVGG ASAFYGFNLVMPIVQRRIKGPMWLHF IGAPPVIVFSSACAGL GGA+PAAAQLVSS YHAAY PT PPPS++ENIQ+S K Sbjct: 3 NSAMEASKLSSSDQNVRCHHCAGPLSKDMETSHWTVSPLIRDSFSMIGSAVGGVASAFYGFNLVMPIVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSFYHAAYFFPTSPPPSKDENIQRSRK 138
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151RMW4|A0A151RMW4_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_034640 PE=4 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 2.986e-73 Identity = 106/122 (86.89%), Postives = 116/122 (95.08%), Query Frame = 0 Query: 19 NIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140 +IRCHHCAGPLSN+MET+ WTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMP+VQRRIKGPMWLHF IGAPPVIVFSSACAGL GGA+PAAAQLVSSSY+AAYS+ T+PPPS++ NIQKS K Sbjct: 14 DIRCHHCAGPLSNQMETTHWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPVVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSSYNAAYSTSTLPPPSKDGNIQKSRK 135
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8K979|A0A8B8K979_ABRPR (Uncharacterized protein LOC113853839 OS=Abrus precatorius OX=3816 GN=LOC113853839 PE=4 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.510e-72 Identity = 109/137 (79.56%), Postives = 117/137 (85.40%), Query Frame = 0 Query: 8 METSKLSNST----QNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140 M SK SNS QNIRCHHCAGPLS MET+ WTV P IRDSFSMIGSAVGGTASAFYGFN VMP+V+R +KGPMWLHF IGAPPVIVFSSACAGL GGA+PA AQLVSSSYHAA+SSPT+ PPSE+ENIQKS K Sbjct: 1 MGASKPSNSQSSPYQNIRCHHCAGPLSKDMETTQWTVPPFIRDSFSMIGSAVGGTASAFYGFNHVMPVVRRSVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAAFSSPTLAPPSEDENIQKSRK 137
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5N6RG49|A0A5N6RG49_9ROSI (Gb protein OS=Carpinus fangiana OX=176857 GN=FH972_016430 PE=4 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 9.566e-68 Identity = 98/125 (78.40%), Postives = 109/125 (87.20%), Query Frame = 0 Query: 14 SNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKS 138 S + N+RCHHCAGPLS METS WTV PLIRDSFSMIGSAVGGT SAFYGFN VMPIV+RR+KGPMWLHF IGAPPVIVFSSACAGL GGA+PA AQL SSSYHAA +SP++PPPS++E + KS Sbjct: 4 SKPSINMRCHHCAGPLSKEMETSRWTVPPLIRDSFSMIGSAVGGTTSAFYGFNHVMPIVRRRVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPALAQLASSSYHAAITSPSLPPPSQDEKMHKS 128
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Match: tr|A0A836DIM5|A0A836DIM5_9ROSI (MOB kinase activator OS=Salix suchowensis OX=1278906 GN=IMY05_016G0018800 PE=4 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 2.105e-67 Identity = 99/132 (75.00%), Postives = 114/132 (86.36%), Query Frame = 0 Query: 7 NMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKS 138 +M SK SN ++RCHHCAGPL+ METS WTV PLIRDSFSMIGSAVGGT SAFYGFN VMP+V+R +KGPMWLHFFIGAPPVIVFSSACAGL GGA+PA AQL SSSYHAA+S+P++PPPS+++ QKS Sbjct: 5 SMPESK-SNPQNSLRCHHCAGPLTKEMETSQWTVRPLIRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRWVKGPMWLHFFIGAPPVIVFSSACAGLAGGAVPALAQLASSSYHAAFSAPSLPPPSQDDKRQKS 135
BLAST of Va05G047940.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:6033797-6035216 FORWARD LENGTH=133) HSP 1 Score: 177.178 bits (448), Expect = 3.604e-58 Identity = 84/120 (70.00%), Postives = 93/120 (77.50%), Query Frame = 0 Query: 19 NIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKS 138 IRCHHCAGPL+ +ETS WTV P IRDSFSMIGSAVGGTASAF GFN MPIV++ IKGPMWLHF +GAPPVIV SSACAGL GG +PA AQL SSSY AA S P ++ +QKS Sbjct: 9 EIRCHHCAGPLTRNLETSKWTVDPFIRDSFSMIGSAVGGTASAFIGFNHAMPIVRKWIKGPMWLHFLVGAPPVIVLSSACAGLAGGTVPALAQLASSSYRAAVHSSQPPQAQKDNKMQKS 128
BLAST of Va05G047940.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:1047754-1049026 FORWARD LENGTH=138) HSP 1 Score: 175.252 bits (443), Expect = 2.334e-57 Identity = 85/127 (66.93%), Postives = 104/127 (81.89%), Query Frame = 0 Query: 10 TSKLSNSTQNI--RCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENEN 134 ++ +++S + I RCHHCAGPL+ +ET+ WTV+P IRDSFSMIGSAVGGTASAF GF+ VMPIV++ IKGPMWLHF +GAPPVIV SSACAGL GGA+PA AQL SSSYHAA S + PP +++N Sbjct: 2 SATMADSGKEIGSRCHHCAGPLTKNLETNEWTVAPFIRDSFSMIGSAVGGTASAFIGFHHVMPIVRKWIKGPMWLHFLVGAPPVIVVSSACAGLAGGAVPALAQLASSSYHAAVHS-SQPPQGQDKN 127
BLAST of Va05G047940.1 vs. Araport11
Match: | (Symbols: RED1 | Retarded Embryo Development 1 | chr2:17511071-17512898 REVERSE LENGTH=158) HSP 1 Score: 71.2478 bits (173), Expect = 2.895e-16 Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 0 Query: 21 RCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQL 112 RC C L+ E WT++P++ D+ ++ GS +GG SA + FN +P +Q R G L F +G P ++V+S A G A+P AQL Sbjct: 30 RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAFGGYALPKFAQL 121
BLAST of Va05G047940.1 vs. Araport11
Match: | (Symbols: RED1 | Retarded Embryo Development 1 | chr2:17509933-17512898 REVERSE LENGTH=166) HSP 1 Score: 70.8626 bits (172), Expect = 4.326e-16 Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 0 Query: 21 RCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQL 112 RC C L+ E WT++P++ D+ ++ GS +GG SA + FN +P +Q R G L F +G P ++V+S A G A+P AQL Sbjct: 30 RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAFGGYALPKFAQL 121
BLAST of Va05G047940.1 vs. Araport11
Match: | (Symbols: RED1 | Retarded Embryo Development 1 | chr2:17509933-17512898 REVERSE LENGTH=204) HSP 1 Score: 61.2326 bits (147), Expect = 4.430e-12 Identity = 31/89 (34.83%), Postives = 49/89 (55.06%), Query Frame = 0 Query: 21 RCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAA 109 RC C L+ E WT++P++ D+ ++ GS +GG SA + FN +P +Q R G L F +G P ++V+S A G ++ AA Sbjct: 30 RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAF-GESLQAA 117 The following BLAST results are available for this feature:
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Va05G047940.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Va05G047940.1 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11) Total hits: 5
InterPro
Analysis Name: InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1
Date Performed: 2024-05-23
Sequences
The
following sequences are available for this feature:
mRNA sequence >Va05G047940.1_Jingnong6 ID=Va05G047940.1_Jingnong6; Name=Va05G047940.1; organism=Vigna angularis; type=mRNA; length=423bpback to top protein sequence of Va05G047940.1_Jingnong6 >Va05G047940.1_Jingnong6 ID=Va05G047940.1_Jingnong6; Name=Va05G047940.1_Jingnong6; organism=Vigna angularis; type=polypeptide; length=140bpback to top mRNA from alignment at Chr5:28272364..28277818+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Va05G047940.1_Jingnong6 ID=Va05G047940.1_Jingnong6; Name=Va05G047940.1; organism=Vigna angularis; type=mRNA; length=5455bp; location=Sequence derived from: Chr5:28272364..28277818+ (Vigna angularisback to top Coding sequence (CDS) from alignment at Chr5:28272364..28277818+ >Va05G047940.1_Jingnong6 ID=Va05G047940.1_Jingnong6; Name=Va05G047940.1; organism=Vigna angularis; type=CDS; length=423bp; location=Sequence derived from: Chr5:28272364..28277818+ (Vigna angularisback to top |