Va10G024160.1

Transcript Overview
NameVa10G024160.1
Unique NameVa10G024160.1_Jingnong6
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length351
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr10chromosomeChr10:13627837..13628716 -Vigna angularis cv. Jingnong6 genome v1.7.1n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Va10G024160Va10G024160_Jingnong6Vigna angularisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va10G024160.1:exon_1_Jingnong6Va10G024160.1:exon_1_Jingnong6Vigna angularisexon
Va10G024160.1:exon_2_Jingnong6Va10G024160.1:exon_2_Jingnong6Vigna angularisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va10G024160.1_Jingnong6-cdsVa10G024160.1_Jingnong6-cds-Chr10_Jingnong6:13627837..13628057Vigna angularisCDS
Va10G024160.1_Jingnong6-cdsVa10G024160.1_Jingnong6-cds-Chr10_Jingnong6:13628587..13628716Vigna angularisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Va10G024160.1_Jingnong6Va10G024160.1_Jingnong6Vigna angularispolypeptide
Va10G024160.1_Jingnong6Va10G024160.1_Jingnong6-proteinVigna angularispolypeptide


Homology
[Close]
BLAST of Va10G024160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V5T5|A0A0L9V5T5_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g113900 PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.019e-30
Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 0 
Query:    8 FLSQISYSLSFPQHVHCFHWHFPTALAASYQSGASSGSDVIVLGADTLRGLYLVETISTVGKICAEVGTK 77
            F S   +SLSFPQH HCFH +FPTAL ASYQSGASSGSD IVLGADTLRGLY V+TISTVGKICAEVGTK
Sbjct:  115 FDSPRLHSLSFPQHGHCFHRNFPTALVASYQSGASSGSDAIVLGADTLRGLYPVKTISTVGKICAEVGTK 184
[Close]
BLAST of Va10G024160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RNK9|A0A0S3RNK9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G216700 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.454e-17
Identity = 42/52 (80.77%), Postives = 45/52 (86.54%), Query Frame = 0 
Query:    3 MASLPFLSQISYSLSFPQHVHCFHWHFPTALAASYQSGASSGSDVIVLGADT 54
            MASLPFLSQIS+SLSFPQH HCFH HFPTALAASYQSGASSG+   V  AD+
Sbjct:    1 MASLPFLSQISHSLSFPQHGHCFHRHFPTALAASYQSGASSGNSWGVDIADS 52
[Close]
BLAST of Va10G024160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U954|A0A1S3U954_VIGRR (D-amino-acid transaminase, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=LOC106762942 PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.391e-15
Identity = 37/43 (86.05%), Postives = 39/43 (90.70%), Query Frame = 0 
Query:    3 MASLPFLSQISYSLSFPQHVHCFHWHFPTALAASYQSGASSGS 45
            MASLPFLSQIS+ LSFPQH HCFH HFPTALAA YQSGASSG+
Sbjct:    1 MASLPFLSQISHPLSFPQHGHCFHRHFPTALAAPYQSGASSGN 43
[Close]
BLAST of Va10G024160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MFX7|A0A4D6MFX7_VIGUN (Branched-chain amino acid aminotransferase OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g987 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.030e-15
Identity = 38/47 (80.85%), Postives = 40/47 (85.11%), Query Frame = 0 
Query:    3 MASLPFLSQISYSLSFPQHVHCFHWHFPTALAASYQSGASSGSDVIV 49
            MASLPFLSQIS+SLSFP+H HCFH HFPTALAASYQSG SS S   V
Sbjct:    1 MASLPFLSQISHSLSFPRHGHCFHRHFPTALAASYQSGPSSDSKTQV 47
[Close]
BLAST of Va10G024160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A2X8X5|A0A6A2X8X5_HIBSY (pyruvate kinase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111881pilonHSYRG00026 PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 6.863e-8
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0 
Query:   30 PT-ALAASYQSGASSGSDVIVLGADTLRGLYLVETISTVGKICAEVGTKTKMYS 82
            PT A A    +    GSD I+LGA+TLRGLY VET+STVGKICAE+ +  K+++
Sbjct:  218 PTRAEATDVANAVLDGSDAILLGAETLRGLYPVETVSTVGKICAELSSAEKVFN 271
[Close]
BLAST of Va10G024160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8N4ETN2|A0A8N4ETN2_ELAGV (Pyruvate kinase OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105034683 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.535e-7
Identity = 32/54 (59.26%), Postives = 37/54 (68.52%), Query Frame = 0 
Query:   30 PT-ALAASYQSGASSGSDVIVLGADTLRGLYLVETISTVGKICAEVGTKTKMYS 82
            PT A A    +    GSD I+LGA+TLRGLY VETISTVGKICAEV    K+ +
Sbjct:  325 PTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGKICAEVRAAIKVRA 378
[Close]
BLAST of Va10G024160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A7J9GT48|A0A7J9GT48_9ROSI (Pyruvate kinase OS=Gossypium harknessii OX=34285 GN=Gohar_011100 PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.663e-7
Identity = 31/48 (64.58%), Postives = 35/48 (72.92%), Query Frame = 0 
Query:   30 PT-ALAASYQSGASSGSDVIVLGADTLRGLYLVETISTVGKICAEVGT 76
            PT A A    +    GSD I+LGA+TLRGLY VETISTVGKICAEV +
Sbjct:  236 PTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGKICAEVNS 283
[Close]
BLAST of Va10G024160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A830C6L3|A0A830C6L3_9LAMI (Pyruvate kinase OS=Phtheirospermum japonicum OX=374723 GN=PHJA_001242500 PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.697e-7
Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = 0 
Query:   30 PT-ALAASYQSGASSGSDVIVLGADTLRGLYLVETISTVGKICAEV 74
            PT A A    +    GSD I+LGA+TLRGLY V+TISTVGKICAEV
Sbjct:  101 PTRAEATDVANAVLDGSDAILLGAETLRGLYPVQTISTVGKICAEV 146
[Close]
BLAST of Va10G024160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0D2RX62|A0A0D2RX62_GOSRA (Pyruvate kinase OS=Gossypium raimondii OX=29730 GN=B456_006G158900 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.737e-7
Identity = 31/48 (64.58%), Postives = 35/48 (72.92%), Query Frame = 0 
Query:   30 PT-ALAASYQSGASSGSDVIVLGADTLRGLYLVETISTVGKICAEVGT 76
            PT A A    +    GSD I+LGA+TLRGLY VETISTVGKICAEV +
Sbjct:  325 PTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGKICAEVNS 372
[Close]
BLAST of Va10G024160.1 vs. UniProtKB/TrEMBL
Match: tr|K7K8T8|K7K8T8_SOYBN (Pyruvate kinase OS=Glycine max OX=3847 GN=GLYMA_02G165000 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.950e-7
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0 
Query:   44 GSDVIVLGADTLRGLYLVETISTVGKICAE 73
            GSD IVLGA+TLRGLY VETISTVGKICAE
Sbjct:    6 GSDAIVLGAETLRGLYPVETISTVGKICAE 35
[Close]
BLAST of Va10G024160.1 vs. UniProtKB/Swiss-Prot
Match: Pyruvate (kinase 2, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0145700 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.252e-8
Identity = 29/45 (64.44%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:   30 PT-ALAASYQSGASSGSDVIVLGADTLRGLYLVETISTVGKICAE 73
            PT A A    +    GSD I+LGA+TLRGLY VETIS VGKICAE
Sbjct:  325 PTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAE 369
[Close]
BLAST of Va10G024160.1 vs. UniProtKB/Swiss-Prot
Match: Pyruvate (kinase 2, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_37456 PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.252e-8
Identity = 29/45 (64.44%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:   30 PT-ALAASYQSGASSGSDVIVLGADTLRGLYLVETISTVGKICAE 73
            PT A A    +    GSD I+LGA+TLRGLY VETIS VGKICAE
Sbjct:  325 PTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAE 369
[Close]
BLAST of Va10G024160.1 vs. UniProtKB/Swiss-Prot
Match: Pyruvate (kinase 1, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0148500 PE=1 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.327e-8
Identity = 29/45 (64.44%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:   30 PT-ALAASYQSGASSGSDVIVLGADTLRGLYLVETISTVGKICAE 73
            PT A A    +    GSD I+LGA+TLRGLY VETIS VGKICAE
Sbjct:  325 PTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAE 369
[Close]
BLAST of Va10G024160.1 vs. UniProtKB/Swiss-Prot
Match: Pyruvate (kinase 1, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35105 PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.327e-8
Identity = 29/45 (64.44%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:   30 PT-ALAASYQSGASSGSDVIVLGADTLRGLYLVETISTVGKICAE 73
            PT A A    +    GSD I+LGA+TLRGLY VETIS VGKICAE
Sbjct:  325 PTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAE 369
[Close]
BLAST of Va10G024160.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:19649046-19652237 FORWARD LENGTH=527)

HSP 1 Score: 55.8398 bits (133), Expect = 4.525e-10
Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = 0 
Query:   30 PT-ALAASYQSGASSGSDVIVLGADTLRGLYLVETISTVGKICAE 73
            PT A A    +    GSD I+LGA+TLRGLY VETISTVG+ICAE
Sbjct:  325 PTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGRICAE 369
[Close]
BLAST of Va10G024160.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:19649336-19652237 FORWARD LENGTH=474)

HSP 1 Score: 55.8398 bits (133), Expect = 4.548e-10
Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = 0 
Query:   30 PT-ALAASYQSGASSGSDVIVLGADTLRGLYLVETISTVGKICAE 73
            PT A A    +    GSD I+LGA+TLRGLY VETISTVG+ICAE
Sbjct:  272 PTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGRICAE 316
[Close]
BLAST of Va10G024160.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:15339253-15342781 FORWARD LENGTH=527)

HSP 1 Score: 53.9138 bits (128), Expect = 2.017e-9
Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:   30 PT-ALAASYQSGASSGSDVIVLGADTLRGLYLVETISTVGKICAE 73
            PT A A    +    GSD I+LGA+TLRGLY VETISTVG+IC E
Sbjct:  325 PTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGRICCE 369
The following BLAST results are available for this feature:
BLAST of Va10G024160.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0L9V5T5|A0A0L9V5T5_PHAAN6.019e-3082.86Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A0S3RNK9|A0A0S3RNK9_PHAAN5.454e-1780.77Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A1S3U954|A0A1S3U954_VIGRR1.391e-1586.05D-amino-acid transaminase, chloroplastic OS=Vigna ... [more]
tr|A0A4D6MFX7|A0A4D6MFX7_VIGUN5.030e-1580.85Branched-chain amino acid aminotransferase OS=Vign... [more]
tr|A0A6A2X8X5|A0A6A2X8X5_HIBSY6.863e-855.56pyruvate kinase OS=Hibiscus syriacus OX=106335 GN=... [more]
tr|A0A8N4ETN2|A0A8N4ETN2_ELAGV1.535e-759.26Pyruvate kinase OS=Elaeis guineensis var. tenera O... [more]
tr|A0A7J9GT48|A0A7J9GT48_9ROSI1.663e-764.58Pyruvate kinase OS=Gossypium harknessii OX=34285 G... [more]
tr|A0A830C6L3|A0A830C6L3_9LAMI1.697e-765.22Pyruvate kinase OS=Phtheirospermum japonicum OX=37... [more]
tr|A0A0D2RX62|A0A0D2RX62_GOSRA1.737e-764.58Pyruvate kinase OS=Gossypium raimondii OX=29730 GN... [more]
tr|K7K8T8|K7K8T8_SOYBN1.950e-790.00Pyruvate kinase OS=Glycine max OX=3847 GN=GLYMA_02... [more]
back to top
BLAST of Va10G024160.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
Pyruvate1.252e-864.44kinase 2, cytosolic OS=Oryza sativa subsp. japonic... [more]
Pyruvate1.252e-864.44kinase 2, cytosolic OS=Oryza sativa subsp. indica ... [more]
Pyruvate1.327e-864.44kinase 1, cytosolic OS=Oryza sativa subsp. japonic... [more]
Pyruvate1.327e-864.44kinase 1, cytosolic OS=Oryza sativa subsp. indica ... [more]
back to top
BLAST of Va10G024160.1 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
|4.525e-1064.44Symbols: no symbol available | no full name availa... [more]
|4.548e-1064.44Symbols: no symbol available | no full name availa... [more]
|2.017e-962.22Symbols: no symbol available | no full name availa... [more]
back to top
Sequences
The following sequences are available for this feature:

mRNA sequence

>Va10G024160.1_Jingnong6 ID=Va10G024160.1_Jingnong6; Name=Va10G024160.1; organism=Vigna angularis; type=mRNA; length=351bp
ATGAACATGGCTTCTCTCCCATTCCTTTCTCAAATTTCCTACTCTCTTTC
CTTTCCGCAACATGTCCACTGCTTCCATTGGCACTTCCCCACCGCTCTCG
CTGCTTCCTACCAATCTGGAGCATCTTCTGGTAGTGATGTAATAGTTCTA
GGGGCAGACACTTTGCGGGGATTATATCTTGTGGAGACTATTTCCACTGT
TGGAAAAATTTGTGCCGAAGTAGGAACTAAAACTAAAATGTATTCTTTAA
ACCATACAGGCCTCTCAATCCTGTTGGCAATGGAACTTAAAATAAAAAAA
GACATACTACCTCGGTTCAGAGGAACCGAGGCATCTGTTGAAAAAAAATA
A
back to top

protein sequence of Va10G024160.1_Jingnong6

>Va10G024160.1_Jingnong6 ID=Va10G024160.1_Jingnong6; Name=Va10G024160.1_Jingnong6; organism=Vigna angularis; type=polypeptide; length=116bp
MNMASLPFLSQISYSLSFPQHVHCFHWHFPTALAASYQSGASSGSDVIVL
GADTLRGLYLVETISTVGKICAEVGTKTKMYSLNHTGLSILLAMELKIKK
DILPRFRGTEASVEKK
back to top

mRNA from alignment at Chr10:13627837..13628716-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Va10G024160.1_Jingnong6 ID=Va10G024160.1_Jingnong6; Name=Va10G024160.1; organism=Vigna angularis; type=mRNA; length=880bp; location=Sequence derived from: Chr10:13627837..13628716- (Vigna angularis
ATGAACATGGCTTCTCTCCCATTCCTTTCTCAAATTTCCTACTCTCTTTC
CTTTCCGCAACATGTCCACTGCTTCCATTGGCACTTCCCCACCGCTCTCG
CTGCTTCCTACCAATCTGGAGCATCTTCTGGTGCGTTTTCTGGACTGCCT
CTTAGATGGAGCTTTTCTTAGATGGGTGCTGGTTGGAAGCCTCTGTTGAT
GGATCTGACTTCTTGCCGCAAAGTCCTTCCTTTTCCAATCCCCTCTTTGA
CCCTTCATTCTCCTGGCCAGCCTCTGTTGATGGATCTGACCATGCTCAAG
AGTATGATGTGCGTGGGTCACTAGCAGTACCAGGATTACCATCGGTATTT
CTTCAATTCATCTTCAATTCAATCCATTTTAATGCAAACCGTTCAGCAAG
ATTAGAAGAAGATGAAGTTTCATAAAGTTGATTATTGGTGTGTGCTTTTG
AACTGCATCTTTTGTTTGTAAATTGTAAAGCCAAGATTGACTCATTTGGA
CGAGATATTGCGAGAAGCTGATGGTATCATCCTCTGTAAATTATCTAGTC
CATTAGATTCACTACTTTTTTCTGATTATTTGTTAATATTTCTTCCACCT
TCATGTTGTTTATTAATGGTTATATCTTACTTTGTTTGTTTTTCCATTTT
ACGATGTAGGTAGTGATGTAATAGTTCTAGGGGCAGACACTTTGCGGGGA
TTATATCTTGTGGAGACTATTTCCACTGTTGGAAAAATTTGTGCCGAAGT
AGGAACTAAAACTAAAATGTATTCTTTAAACCATACAGGCCTCTCAATCC
TGTTGGCAATGGAACTTAAAATAAAAAAAGACATACTACCTCGGTTCAGA
GGAACCGAGGCATCTGTTGAAAAAAAATAA
back to top

Coding sequence (CDS) from alignment at Chr10:13627837..13628716-

>Va10G024160.1_Jingnong6 ID=Va10G024160.1_Jingnong6; Name=Va10G024160.1; organism=Vigna angularis; type=CDS; length=351bp; location=Sequence derived from: Chr10:13627837..13628716- (Vigna angularis
ATGAACATGGCTTCTCTCCCATTCCTTTCTCAAATTTCCTACTCTCTTTC
CTTTCCGCAACATGTCCACTGCTTCCATTGGCACTTCCCCACCGCTCTCG
CTGCTTCCTACCAATCTGGAGCATCTTCTGGTAGTGATGTAATAGTTCTA
GGGGCAGACACTTTGCGGGGATTATATCTTGTGGAGACTATTTCCACTGT
TGGAAAAATTTGTGCCGAAGTAGGAACTAAAACTAAAATGTATTCTTTAA
ACCATACAGGCCTCTCAATCCTGTTGGCAATGGAACTTAAAATAAAAAAA
GACATACTACCTCGGTTCAGAGGAACCGAGGCATCTGTTGAAAAAAAATA
A
back to top