Vfaba.Hedin2.R1.1g056800.1

Transcript Overview


Name	Vfaba.Hedin2.R1.1g056800.1
Unique Name	Vfaba.Hedin2.R1.1g056800.1_vfh_v1
Type	mRNA
Organism	Vicia faba (Faba bean)
Sequence length	453

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr1S	chromosome	chr1S:360059446..360060009 +	Vicia faba inbred line Hedin/2 genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vicia faba inbred line Hedin/2 genome v1.0	2023-05-02
InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins	2023-05-12
Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL	2023-05-12
Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot	2023-05-12
Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11	2023-05-12

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
vfhzwsR147	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
vfhzwsR157	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
psvfhL414	Pisum sativum Cameor genome v1a	Pisum sativum
vfhvfhR102	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
tifvfhL071	Vicia faba cv. Tiffany genome v1.0	Vicia faba
vfhvuR119	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vfhvuR161	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
tifvfhL387	Vicia faba cv. Tiffany genome v1.0	Vicia faba
vfhvrvR159	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vfhvrvR180	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vfhvssR123	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vfhvuaR108	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vfhvuaR150	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vfhvssR175	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vfhvumR204	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vfhvumR221	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vfhvvaR141	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vfhvvaR174	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vfhvstR183	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vfhvstR201	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vfhvunR103	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
vfhvunR143	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Orthologs


Gene/Transcript	Assembly	Species
Psat05G0737200-T11	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
jg44011.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
XM_058917846.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Vfaba.Tiffany.R1.1g038400.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vfaba.Hedin2.R1.1g056800	Vfaba.Hedin2.R1.1g056800_vfh_v1	Vicia faba	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Hedin2.R1.1g056800.1_vfh_v1-exon	Vfaba.Hedin2.R1.1g056800.1_vfh_v1-exon-chr1S_vfh_v1:360059446..360059655	Vicia faba	exon
Vfaba.Hedin2.R1.1g056800.1_vfh_v1-exon	Vfaba.Hedin2.R1.1g056800.1_vfh_v1-exon-chr1S_vfh_v1:360059767..360060009	Vicia faba	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Hedin2.R1.1g056800.1_vfh_v1-cds	Vfaba.Hedin2.R1.1g056800.1_vfh_v1-cds-chr1S_vfh_v1:360059446..360059655	Vicia faba	CDS
Vfaba.Hedin2.R1.1g056800.1_vfh_v1-cds	Vfaba.Hedin2.R1.1g056800.1_vfh_v1-cds-chr1S_vfh_v1:360059767..360060009	Vicia faba	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Hedin2.R1.1g056800.1_vfh_v1	Vfaba.Hedin2.R1.1g056800.1_vfh_v1	Vicia faba	polypeptide
Vfaba.Hedin2.R1.1g056800.1_vfh_v1	Vfaba.Hedin2.R1.1g056800.1_vfh_v1-protein	Vicia faba	polypeptide

Homology

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A251U753|A0A251U753_HELAN (Histone H2A OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0227831 PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 3.836e-84
Identity = 129/150 (86.00%), Postives = 139/150 (92.67%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKSPSKARKSPKKA 150
            M+++ KVKKGA GRK GGPRKK+VTRSVKAGLQFPVGRIGRFLKKGRYAQRVG+GAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRH+LLAIRND+ELGKLLAGVTIAHGGVLPNINP+LLPK+    AA  PKSPSKA KSPKKA
Sbjct:    1 MESTGKVKKGAAGRKAGGPRKKAVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPILLPKK---TAAKEPKSPSKATKSPKKA 147

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2J6LEZ7|A0A2J6LEZ7_LACSA (Histone H2A OS=Lactuca sativa OX=4236 GN=LSAT_2X110521 PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 5.227e-83
Identity = 125/150 (83.33%), Postives = 138/150 (92.00%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKSPSKARKSPKKA 150
            MDA TKVKKGA GRK GGP+KK V+RSVKAGLQFPVGR+GRFLKKG+YA+RVG+GAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+LLA+RND+ELGKLL+GVTIAHGGVLPNINPVLLPK+A + A   PKSPSKA KSPKKA
Sbjct:    1 MDAGTKVKKGAAGRKAGGPKKKPVSRSVKAGLQFPVGRLGRFLKKGQYAKRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKALDKATKEPKSPSKATKSPKKA 150

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A164WHA7|A0A164WHA7_DAUCS (Histone H2A OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_020857 PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 9.159e-83
Identity = 126/150 (84.00%), Postives = 137/150 (91.33%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKSPSKARKSPKKA 150
            M+   KVKKGA GRK GGP+KK V+RSVKAGL FPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK+R+ PRHLLLAIRND+ELGKLLAGVTIAHGGVLPNINPVLLPK++E A+  + KSPSKA KSP+KA
Sbjct:    1 MEGGGKVKKGAAGRKAGGPKKKPVSRSVKAGLTFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSEKASQESTKSPSKATKSPRKA 150

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/TrEMBL
Match: tr|V4LCQ3|V4LCQ3_EUTSA (Histone H2A OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10014920mg PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.178e-82
Identity = 125/152 (82.24%), Postives = 139/152 (91.45%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAA--ASTPKSPSKARKSPKKA 150
            MD+ TKVKKGA GR+ GGP+KK V+RSVKAGLQFPVGRIGR+LKKGRY++RVGTGAPVYLAAVLEYL AEVLELAGNAARDNKKNR+ PRH+LLA+RND+ELGKLL GVTIAHGGVLPNINP+LLPK++E AA  A  PKSPSKA KSPKKA
Sbjct:    1 MDSGTKVKKGASGRRSGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLVAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLKGVTIAHGGVLPNINPILLPKKSEKAASPAKVPKSPSKAAKSPKKA 152

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2U1LCN7|A0A2U1LCN7_ARTAN (Histone H2A OS=Artemisia annua OX=35608 GN=CTI12_AA317410 PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.927e-82
Identity = 127/150 (84.67%), Postives = 137/150 (91.33%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKSPSKARKSPKKA 150
            M+ + K+KKGA GRK GGPRKKSVTRSVKAGLQFPVGRIGR+LKKGRYA+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+LLAIRND+ELGKLL+GVTIAHGGVLPNINPVLLPK+   A  STPKSPSK  KSPKKA
Sbjct:    1 MEGTGKIKKGAAGRKAGGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKTA-AKESTPKSPSKVGKSPKKA 149

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6L2P3X2|A0A6L2P3X2_TANCI (Histone H2A OS=Tanacetum cinerariifolium OX=118510 GN=Tci_065186 PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.297e-82
Identity = 129/150 (86.00%), Postives = 137/150 (91.33%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKSPSKARKSPKKA 150
            M+ + KVKKGA GRK GGPRKKSVTRSVKAGLQFPVG IGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRH+LLAIRND +LGKLL+GVTIAHGGVLPNINPVLLPK+   A  STPKSPSKA KSPKKA
Sbjct:    1 MEGTGKVKKGAAGRKAGGPRKKSVTRSVKAGLQFPVGIIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDTKLGKLLSGVTIAHGGVLPNINPVLLPKKTA-AKESTPKSPSKAGKSPKKA 149

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2U1LYV8|A0A2U1LYV8_ARTAN (Histone H2A OS=Artemisia annua OX=35608 GN=CTI12_AA438060 PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.342e-82
Identity = 127/150 (84.67%), Postives = 137/150 (91.33%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKSPSKARKSPKKA 150
            M+ + K+KKGA GRK GGPRKKSVTRSVKAGLQFPVGRIGR+LKKGRYA+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+LLAIRND+ELGKLL+GVTIAHGGVLPNINPVLLPK+   A   TPKSPSKA KSPKKA
Sbjct:    1 MEGTGKIKKGAAGRKAGGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKTA-AKEPTPKSPSKAAKSPKKA 149

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6S7MC25|A0A6S7MC25_LACSI (Histone H2A OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS13518 PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 7.934e-82
Identity = 123/150 (82.00%), Postives = 137/150 (91.33%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKSPSKARKSPKKA 150
            M+  TKVKKGA GRK GGP+KK V+RSVKAGLQFPVGR+GRFLKKG+YA+RVG+GAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+LLA+RND+ELGKLL+GVTIAHGGVLPNINPVLLPK+A + A   PKSPSKA KSPKKA
Sbjct:    1 METGTKVKKGAAGRKAGGPKKKPVSRSVKAGLQFPVGRLGRFLKKGQYAKRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKALDKATKEPKSPSKATKSPKKA 150

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2U1KNS1|A0A2U1KNS1_ARTAN (Histone H2A OS=Artemisia annua OX=35608 GN=CTI12_AA581510 PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.027e-82
Identity = 126/149 (84.56%), Postives = 136/149 (91.28%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKSPSKARKSPKK 149
            M+ + K+KKGA GRK GGPRKKSVTRSVKAGLQFPVGRIGR+LKKGRYA+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+LLAIRND+ELGKLL+GVTIAHGGVLPNINPVLLPK+   A  STPKSPSK  KSPKK
Sbjct:    1 MEGTGKIKKGAAGRKAGGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKTA-AKESTPKSPSKVGKSPKK 148

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A022QLV9|A0A022QLV9_ERYGU (Histone H2A OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a015602mg PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.116e-81
Identity = 123/152 (80.92%), Postives = 141/152 (92.76%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAAS--TPKSPSKARKSPKKA 150
            M+   K+KKGA GRKG GP+KK V+RS+KAGLQFPVGRIGR+LKKGRY+QRVG+GAPVY+AAVLEYLAAEVLELAGNAARDNKKNR+ PRHLLLA+RND+ELGKLLAGVTIAHGGV+PNINPVLLPK++E AAA+  +PKSP+KA KSPKKA
Sbjct:    1 METGGKMKKGAAGRKGTGPKKKPVSRSMKAGLQFPVGRIGRYLKKGRYSQRVGSGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVIPNINPVLLPKKSEKAAAAEKSPKSPAKATKSPKKA 152

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/Swiss-Prot
Match: sp|P40281|H2A2_PEA (Histone H2A.2 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 7.754e-79
Identity = 138/150 (92.00%), Postives = 146/150 (97.33%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKSPSKARKSPKKA 150
            MDASTKVKKGAGGRKGGGPRKK+VTRSV+AGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+SPRHLLLA+RND ELGKLLAGVTIA+GGVLPNINPVLLPKR E+ AAS PKSPSKA+K+PKKA
Sbjct:    1 MDASTKVKKGAGGRKGGGPRKKAVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAYGGVLPNINPVLLPKRTES-AASAPKSPSKAKKTPKKA 149

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q2HU68|H2A1_MEDTR (Probable histone H2A.1 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.215e-78
Identity = 132/150 (88.00%), Postives = 141/150 (94.00%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKSPSKARKSPKKA 150
            MDASTK KKGAGGRKGG PRKKSVTRS +AGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRH+LLA+RND+ELGKLLAGVTIAHGGVLPNINP+LLPK+ E AA +T KSPSKA KSPKKA
Sbjct:    1 MDASTKTKKGAGGRKGG-PRKKSVTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNEKAATTT-KSPSKATKSPKKA 148

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/Swiss-Prot
Match: sp|P19177|H2A_PETCR (Histone H2A OS=Petroselinum crispum OX=4043 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.229e-78
Identity = 117/132 (88.64%), Postives = 122/132 (92.42%), Query Frame = 0

Query:   19 PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKSPSKARKSPKKA 150
            PRKKSVTRSVKAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRHLLLA+RND+ELGKLLAGVT AHGGVLPNINPVLLPK+    AA  PKSPSKA KSPKKA
Sbjct:   18 PRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTFAHGGVLPNINPVLLPKKTAEKAAKEPKSPSKAGKSPKKA 149

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M531|H2A_EUPES (Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.807e-78
Identity = 126/153 (82.35%), Postives = 137/153 (89.54%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLL---PKRAENAAASTPKSPSKARKSPKKA 150
            MD   K+KKGAG RKGGGP+KK V+RSVKAGLQFPVGRIGRFLKKGRYAQRVG+GAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRH+LLA+RND+ELGKLLAGVTIAHGGVLPNINPVLL    ++A  AA   PKSP+KA KSPKKA
Sbjct:    1 MDTGAKLKKGAGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKAEKAAAAATKEPKSPAKATKSPKKA 153

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/Swiss-Prot
Match: sp|P25469|H2A1_SOLLC (Histone H2A.1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.793e-78
Identity = 122/150 (81.33%), Postives = 136/150 (90.67%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKSPSKARKSPKKA 150
            MDA TK  KGAGGRKGG PRKKSVT+S+KAGLQFPVGRIGR+LKKGRYAQRVG+GAP+YLAAVLEYLAAEVLELAGNAARDNKK+R+ PRH+LLA+RND+ELGKLLAGVTIA GGVLPNINPVLLPK++  A   +PK  +KA KSPKKA
Sbjct:    1 MDA-TKTTKGAGGRKGG-PRKKSVTKSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPIYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPKKSAVAEEKSPK--AKAGKSPKKA 146

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LZ46|H2A4_ARATH (Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.655e-77
Identity = 123/153 (80.39%), Postives = 141/153 (92.16%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGG-PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAAS--TPKSPSKARKSPKKA 150
            MD+ TKVKKGA GR+ GG P+KK V+RSVK+GLQFPVGRIGR+LKKGRY++RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRH+LLA+RND+ELG LL GVTIAHGGVLPNINP+LLPK++E AA++  TPKSPSKA KSPKK+
Sbjct:    1 MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSKATKSPKKS 153

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/Swiss-Prot
Match: sp|P02277|H2A3_WHEAT (Histone H2A.2.2 OS=Triticum aestivum OX=4565 PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 3.020e-76
Identity = 124/153 (81.05%), Postives = 137/153 (89.54%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAA---STPKSPSKARKSPKKA 150
            MDAS K+KK AG +K GGPRKKSVTRS+KAGLQFPVGRIGR+LKKGRYAQRVG+GAPVYLAAVLEYLAAEVLELAGNAA+DNKK+R+ PRHLLLA+RNDQELG+LLAGVTIAHGGV+PNINPVLLPK+A   A    +  KSP KA KSPKKA
Sbjct:    1 MDAS-KLKKVAG-KKFGGPRKKSVTRSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNKKSRIVPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINPVLLPKKAAEKAEKAGTKAKSPKKATKSPKKA 151

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/Swiss-Prot
Match: sp|P25470|H2A1_PEA (Histone H2A.1 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.184e-74
Identity = 128/136 (94.12%), Postives = 134/136 (98.53%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAAST 136
            MDASTK KKGAGGRKGGGPRKKSVTRSV+AGLQFPVGR+GRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+SPRHLLLA+RND+ELGKLLAGVTIA+GGVLPNINPVLLPKR ENAAAST
Sbjct:    1 MDASTKTKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRVGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDEELGKLLAGVTIAYGGVLPNINPVLLPKRKENAAAST 136

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q2HU65|H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.030e-73
Identity = 132/153 (86.27%), Postives = 141/153 (92.16%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAE--NAAASTPKSPS-KARKSPKKA 150
            MDASTK KKGAGGRKGGGPRKKSVTRS++AGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRH+LLA+RND+ELGKLLAGVTIAHGGVLPNINPVLLPK+ E  N  +  PKSP  KA KSPKKA
Sbjct:    1 MDASTKTKKGAGGRKGGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTERSNTVSKEPKSPKPKAGKSPKKA 153

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q94F49|H2A5_ARATH (Probable histone H2A.5 OS=Arabidopsis thaliana OX=3702 GN=At5g27670 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 1.086e-72
Identity = 114/149 (76.51%), Postives = 129/149 (86.58%), Query Frame = 0

Query:    2 DASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKSPSKARKSPKKA 150
             A+TK  +GAGGRKGG  RKKSV++SVKAGLQFPVGRI R+LKKGRYA R G+GAPVYLAAVLEYLAAEVLELAGNAARDNKKNR++PRHL LAIRND+ELG+LL GVTIA GGVLPNINPVLLPK++   A+S+    + A KSPKKA
Sbjct:    5 QATTKPTRGAGGRKGGD-RKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKS--TASSSQAEKASATKSPKKA 150

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. Araport11
Match: AT5G02560.1 (| histone H2A 12 | Chr5:575437-576456 FORWARD LENGTH=153 | 201606)

HSP 1 Score: 229.95 bits (585), Expect = 1.693e-78
Identity = 123/153 (80.39%), Postives = 141/153 (92.16%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGG-PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAAS--TPKSPSKARKSPKKA 150
            MD+ TKVKKGA GR+ GG P+KK V+RSVK+GLQFPVGRIGR+LKKGRY++RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRH+LLA+RND+ELG LL GVTIAHGGVLPNINP+LLPK++E AA++  TPKSPSKA KSPKK+
Sbjct:    1 MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSKATKSPKKS 153

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. Araport11
Match: AT5G27670.1 (| histone H2A 7 | Chr5:9792807-9793365 REVERSE LENGTH=150 | 201606)

HSP 1 Score: 217.624 bits (553), Expect = 1.111e-73
Identity = 114/149 (76.51%), Postives = 129/149 (86.58%), Query Frame = 0

Query:    2 DASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKSPSKARKSPKKA 150
             A+TK  +GAGGRKGG  RKKSV++SVKAGLQFPVGRI R+LKKGRYA R G+GAPVYLAAVLEYLAAEVLELAGNAARDNKKNR++PRHL LAIRND+ELG+LL GVTIA GGVLPNINPVLLPK++   A+S+    + A KSPKKA
Sbjct:    5 QATTKPTRGAGGRKGGD-RKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKS--TASSSQAEKASATKSPKKA 150

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. Araport11
Match: AT5G02560.2 (| histone H2A 12 | Chr5:575437-576456 FORWARD LENGTH=177 | 201606)

HSP 1 Score: 217.624 bits (553), Expect = 2.859e-73
Identity = 123/177 (69.49%), Postives = 141/177 (79.66%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKGGG-PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAE------------------------VLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAAS--TPKSPSKARKSPKKA 150
            MD+ TKVKKGA GR+ GG P+KK V+RSVK+GLQFPVGRIGR+LKKGRY++RVGTGAPVYLAAVLEYLAAE                        VLELAGNAARDNKKNR+ PRH+LLA+RND+ELG LL GVTIAHGGVLPNINP+LLPK++E AA++  TPKSPSKA KSPKK+
Sbjct:    1 MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAENSCGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSKATKSPKKS 177

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. Araport11
Match: AT5G59870.1 (| histone H2A 6 | Chr5:24115605-24116144 REVERSE LENGTH=150 | 201606)

HSP 1 Score: 213.001 bits (541), Expect = 6.767e-72
Identity = 113/150 (75.33%), Postives = 128/150 (85.33%), Query Frame = 0

Query:    1 MDASTKVKKGAGGRKG-GGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKR-----AENAAASTP-KSPSKA 143
            M+++ KVKK  GGRK  G P+ KSV++S+KAGLQFPVGRI RFLKKGRYAQR+G GAPVY+AAVLEYLAAEVLELAGNAARDNKK+R+ PRHLLLAIRND+ELGKLL+GVTIAHGGVLPNIN VLLPK+     AE  A  +P KSP KA
Sbjct:    1 MESTGKVKKAFGGRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKSATKPAEEKATKSPVKSPKKA 150

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. Araport11
Match: AT1G51060.1 (| histone H2A 10 | Chr1:18926948-18927443 FORWARD LENGTH=132 | 201606)

HSP 1 Score: 180.259 bits (456), Expect = 3.965e-59
Identity = 89/119 (74.79%), Postives = 101/119 (84.87%), Query Frame = 0

Query:   10 GAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKR 128
            G G   G G  KK+ TRS KAGLQFPVGRI RFLKKG+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+ LA+RND+EL KLL  VTIA+GGV+PNI+ +LLPK+
Sbjct:    3 GRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. Araport11
Match: AT4G27230.2 (| histone H2A 2 | Chr4:13637515-13638325 REVERSE LENGTH=131 | 201606)

HSP 1 Score: 179.489 bits (454), Expect = 5.697e-59
Identity = 89/120 (74.17%), Postives = 102/120 (85.00%), Query Frame = 0

Query:   10 GAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRA 129
            G G + G G  KKS +RS KAGLQFPVGRI RFLK G+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+ LA+RND+EL KLL  VTIA+GGV+PNI+ +LLPK+A
Sbjct:    3 GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. Araport11
Match: AT4G27230.1 (| histone H2A 2 | Chr4:13637515-13638325 REVERSE LENGTH=131 | 201606)

HSP 1 Score: 179.489 bits (454), Expect = 5.697e-59
Identity = 89/120 (74.17%), Postives = 102/120 (85.00%), Query Frame = 0

Query:   10 GAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRA 129
            G G + G G  KKS +RS KAGLQFPVGRI RFLK G+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+ LA+RND+EL KLL  VTIA+GGV+PNI+ +LLPK+A
Sbjct:    3 GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. Araport11
Match: AT3G20670.1 (| histone H2A 13 | Chr3:7229472-7229963 FORWARD LENGTH=132 | 201606)

HSP 1 Score: 178.333 bits (451), Expect = 1.817e-58
Identity = 89/120 (74.17%), Postives = 100/120 (83.33%), Query Frame = 0

Query:   10 GAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRA 129
            G G   G G  KKS +RS KAGLQFPVGRI RFLK G+YA RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+ LA+RND+EL KLL  VTIA+GGV+PNI+ +LLPK+A
Sbjct:    3 GRGKTLGSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKA 122

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. Araport11
Match: AT5G54640.1 (| Histone superfamily protein | Chr5:22196540-22197279 FORWARD LENGTH=130 | 201606)

HSP 1 Score: 176.407 bits (446), Expect = 1.061e-57
Identity = 91/130 (70.00%), Postives = 105/130 (80.77%), Query Frame = 0

Query:   10 GAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKS 139
            G G   G G  KK+ +RS KAGLQFPVGRI RFLK G+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+ LA+RND+EL KLL  VTIA+GGV+PNI+ +LLPK+   A AS P+ 
Sbjct:    3 GRGKTLGSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK---AGASKPQE 129

[Close]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. Araport11
Match: AT1G08880.1 (| Histone superfamily protein | Chr1:2847144-2847676 REVERSE LENGTH=142 | 201606)

HSP 1 Score: 174.866 bits (442), Expect = 6.671e-57
Identity = 88/122 (72.13%), Postives = 101/122 (82.79%), Query Frame = 0

Query:   10 GAGGRKGGGPR---KKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQELGKLLAGVTIAHGGVLPNINPVLLPKR 128
            G+G  KGG  +    KSV+RS KAGLQFPVGRI RFLK G+YA+RVG GAPVYL+AVLEYLAAEVLELAGNAARDNKK R+ PRH+ LA+RND+EL KLL  VTIA+GGVLPNI+  LLP +
Sbjct:    6 GSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSK 127

The following BLAST results are available for this feature:

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/TrEMBL
BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/Swiss-Prot
BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. Araport11

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A251U753\|A0A251U753_HELAN	3.836e-84	86.00	Histone H2A OS=Helianthus annuus OX=4232 GN=HannXR...	[more]
tr\|A0A2J6LEZ7\|A0A2J6LEZ7_LACSA	5.227e-83	83.33	Histone H2A OS=Lactuca sativa OX=4236 GN=LSAT_2X11...	[more]
tr\|A0A164WHA7\|A0A164WHA7_DAUCS	9.159e-83	84.00	Histone H2A OS=Daucus carota subsp. sativus OX=792...	[more]
tr\|V4LCQ3\|V4LCQ3_EUTSA	2.178e-82	82.24	Histone H2A OS=Eutrema salsugineum OX=72664 GN=EUT...	[more]
tr\|A0A2U1LCN7\|A0A2U1LCN7_ARTAN	2.927e-82	84.67	Histone H2A OS=Artemisia annua OX=35608 GN=CTI12_A...	[more]
tr\|A0A6L2P3X2\|A0A6L2P3X2_TANCI	3.297e-82	86.00	Histone H2A OS=Tanacetum cinerariifolium OX=118510...	[more]
tr\|A0A2U1LYV8\|A0A2U1LYV8_ARTAN	5.342e-82	84.67	Histone H2A OS=Artemisia annua OX=35608 GN=CTI12_A...	[more]
tr\|A0A6S7MC25\|A0A6S7MC25_LACSI	7.934e-82	82.00	Histone H2A OS=Lactuca saligna OX=75948 GN=LSAL_LO...	[more]
tr\|A0A2U1KNS1\|A0A2U1KNS1_ARTAN	8.027e-82	84.56	Histone H2A OS=Artemisia annua OX=35608 GN=CTI12_A...	[more]
tr\|A0A022QLV9\|A0A022QLV9_ERYGU	1.116e-81	80.92	Histone H2A OS=Erythranthe guttata OX=4155 GN=MIMG...	[more]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
sp\|P40281\|H2A2_PEA	7.754e-79	92.00	Histone H2A.2 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
sp\|Q2HU68\|H2A1_MEDTR	1.215e-78	88.00	Probable histone H2A.1 OS=Medicago truncatula OX=3...	[more]
sp\|P19177\|H2A_PETCR	1.229e-78	88.64	Histone H2A OS=Petroselinum crispum OX=4043 PE=2 S...	[more]
sp\|Q9M531\|H2A_EUPES	1.807e-78	82.35	Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1	[more]
sp\|P25469\|H2A1_SOLLC	2.793e-78	81.33	Histone H2A.1 OS=Solanum lycopersicum OX=4081 PE=2...	[more]
sp\|Q9LZ46\|H2A4_ARATH	1.655e-77	80.39	Probable histone H2A.4 OS=Arabidopsis thaliana OX=...	[more]
sp\|P02277\|H2A3_WHEAT	3.020e-76	81.05	Histone H2A.2.2 OS=Triticum aestivum OX=4565 PE=1 ...	[more]
sp\|P25470\|H2A1_PEA	3.184e-74	94.12	Histone H2A.1 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
sp\|Q2HU65\|H2A2_MEDTR	1.030e-73	86.27	Probable histone H2A.2 OS=Medicago truncatula OX=3...	[more]
sp\|Q94F49\|H2A5_ARATH	1.086e-72	76.51	Probable histone H2A.5 OS=Arabidopsis thaliana OX=...	[more]

BLAST of Vfaba.Hedin2.R1.1g056800.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 10


Match Name	E-value	Identity	Description
AT5G02560.1	1.693e-78	80.39	\| histone H2A 12 \| Chr5:575437-576456 FORWARD LENG...	[more]
AT5G27670.1	1.111e-73	76.51	\| histone H2A 7 \| Chr5:9792807-9793365 REVERSE LEN...	[more]
AT5G02560.2	2.859e-73	69.49	\| histone H2A 12 \| Chr5:575437-576456 FORWARD LENG...	[more]
AT5G59870.1	6.767e-72	75.33	\| histone H2A 6 \| Chr5:24115605-24116144 REVERSE L...	[more]
AT1G51060.1	3.965e-59	74.79	\| histone H2A 10 \| Chr1:18926948-18927443 FORWARD ...	[more]
AT4G27230.2	5.697e-59	74.17	\| histone H2A 2 \| Chr4:13637515-13638325 REVERSE L...	[more]
AT4G27230.1	5.697e-59	74.17	\| histone H2A 2 \| Chr4:13637515-13638325 REVERSE L...	[more]
AT3G20670.1	1.817e-58	74.17	\| histone H2A 13 \| Chr3:7229472-7229963 FORWARD LE...	[more]
AT5G54640.1	1.061e-57	70.00	\| Histone superfamily protein \| Chr5:22196540-2219...	[more]
AT1G08880.1	6.671e-57	72.13	\| Histone superfamily protein \| Chr1:2847144-28476...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 51..66 score: 86.43 coord: 80..94 score: 69.46 coord: 22..44 score: 68.74 coord: 66..79 score: 89.46 coord: 108..126 score: 75.79
IPR002119	Histone H2A	PANTHER	PTHR23430	HISTONE H2A	coord: 17..128
IPR002119	Histone H2A	CDD	cd00074	H2A	coord: 23..127 e-value: 6.40151E-64 score: 189.468
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 9..138 e-value: 2.0E-62 score: 210.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 25..127
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 21..97 e-value: 9.9E-11 score: 42.0
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 101..133 e-value: 2.6E-16 score: 59.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..150

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1S:360059446..360060009+

mRNA sequence

>Vfaba.Hedin2.R1.1g056800.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g056800.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g056800.1; organism=Vicia faba; type=mRNA; length=453bp
ATGGACGCAAGCACAAAGGTGAAGAAAGGTGCCGGAGGAAGGAAAGGAGG
AGGACCAAGGAAGAAGTCCGTCACCAGATCTGTCAAAGCCGGACTTCAGT
TTCCCGTCGGAAGAATCGGCCGTTTCTTGAAGAAAGGTAGATATGCTCAG
CGTGTTGGTACCGGTGCTCCTGTTTACCTTGCTGCTGTTCTCGAGTATCT
TGCCGCTGAGGTTCTTGAGTTGGCTGGAAATGCAGCACGTGACAACAAAA
AGAATAGAGTTAGTCCAAGGCATTTGTTGTTGGCTATTAGGAATGATCAA
GAGCTTGGAAAATTGCTTGCCGGTGTTACTATTGCTCACGGTGGTGTTCT
TCCTAATATTAACCCTGTCCTTTTGCCTAAGAGGGCTGAAAATGCTGCTG
CTAGTACTCCCAAATCTCCATCAAAGGCCAGGAAATCTCCTAAGAAAGCC
TAG

protein sequence of Vfaba.Hedin2.R1.1g056800.1_vfh_v1

>Vfaba.Hedin2.R1.1g056800.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g056800.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g056800.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=150bp
MDASTKVKKGAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQ
RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAIRNDQ
ELGKLLAGVTIAHGGVLPNINPVLLPKRAENAAASTPKSPSKARKSPKKA

mRNA from alignment at chr1S:360059446..360060009+

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>Vfaba.Hedin2.R1.1g056800.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g056800.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g056800.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:360059446..360060009+ (Vicia faba

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002119	Histone_H2A
IPR009072	Histone-fold
IPR007125	Histone_H2A/H2B/H3
IPR032454	Histone_H2A_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0030527	structural constituent of chromatin
GO:0003677	DNA binding
GO:0046982	protein heterodimerization activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0000786	nucleosome

Search form

Vfaba.Hedin2.R1.1g056800.1