Vfaba.Hedin2.R1.1g450920.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.1g450920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Z826|A0A1S2Z826_CICAR (uncharacterized protein LOC101503943 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101503943 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.079e-71 Identity = 122/179 (68.16%), Postives = 135/179 (75.42%), Query Frame = 0 Query: 1 MQQR-----RPSGTDGSDYSYRMVVDSRYQLVAKGKT---------------RVVFAVLPGKKDGTTNIVAISSVIASLVLLIIGDLGRRRSRSSLLRLYTILSSLAMLLFTASLANQYSLLKVIQYFSKRETSNFDVDYLALQTGLLVYILTLYLFKISVIKAVVFLLFNMTPPKKAS 159 MQQR RPSGTDGSD+SYRMVVDSRYQLVAKG+ V+FA LPG K T N VA+SSVIAS+VLLII D+GRRRS++SLLRLY +SS+A+LL ASLANQYSLLK IQYFS R T +DVD+ LQTGLLVYILTL LFKIS IKAV LLFNMTPPKKAS Sbjct: 1 MQQRKSSLGRPSGTDGSDFSYRMVVDSRYQLVAKGRKCLSLRFIIEALFLFIGVIFAFLPGTKGDTPNTVALSSVIASIVLLIIADIGRRRSQTSLLRLYAFVSSIAILLLVASLANQYSLLKAIQYFSHRGTRGYDVDFPILQTGLLVYILTLSLFKISNIKAVATLLFNMTPPKKAS 179
BLAST of Vfaba.Hedin2.R1.1g450920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XY59|A0A1S2XY59_CICAR (uncharacterized protein LOC101514563 OS=Cicer arietinum OX=3827 GN=LOC101514563 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 5.305e-62 Identity = 123/179 (68.72%), Postives = 132/179 (73.74%), Query Frame = 0 Query: 1 MQQR-----RPSGTDGSDYSYRMVVDSRYQLVAKGKTR---------------VVFAVLPGKKDGTTNIVAISSVIASLVLLIIGDLGRRRSRSSLLRLYTILSSLAMLLFTASLANQYSLLKVIQYFSKRETSNFDVDYLALQTGLLVYILTLYLFKISVIKAVVFLLFNMTPPKKAS 159 MQQR RPSGTDGSDYSYRMVVDSRYQLVAKGK R V+FA LPG K T N VA SSVIAS VLLII D+GRRRSRSSLLRLY LSS+ MLL AS A QYSLLK IQYFS + DVD+ +LQTGLL+YILTL +FKIS IKAV+FLLFNMTPPKKAS Sbjct: 1 MQQRNSTLGRPSGTDGSDYSYRMVVDSRYQLVAKGKKRLSLLFIIEALFLLIGVIFAFLPGTKGDTPNTVAFSSVIASGVLLIIADIGRRRSRSSLLRLYAFLSSIVMLLLVASFAKQYSLLKAIQYFSYHGLRDSDVDFPSLQTGLLLYILTLSIFKISTIKAVMFLLFNMTPPKKAS 179
BLAST of Vfaba.Hedin2.R1.1g450920.1 vs. UniProtKB/TrEMBL
Match: tr|G8A2G4|G8A2G4_MEDTR (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=25489516 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 2.223e-61 Identity = 134/179 (74.86%), Postives = 145/179 (81.01%), Query Frame = 0 Query: 1 MQQR-----RPSGTDGSDYSYRMVVDSRYQLVAKGKTR---------------VVFAVLPGKKDGTTNIVAISSVIASLVLLIIGDLGRRRSRSSLLRLYTILSSLAMLLFTASLANQYSLLKVIQYFSKRETSNFDVDYLALQTGLLVYILTLYLFKISVIKAVVFLLFNMTPPKKAS 159 MQQR RPSGTDGSDYSYRMVVDSRYQLVAKGK R V+FA LPG K+ T N VAISSVIAS+VLLII D+GRRRSRSSLLRLY +LSSLA+LLFTA+LAN+YSLLKVIQYFS R TS+FDVD+ +LQTGLLVYILT LFKIS IKAVVFLLFNMTPPKKAS Sbjct: 1 MQQRKSPLGRPSGTDGSDYSYRMVVDSRYQLVAKGKKRLSVLFTIEALFLLTGVIFAFLPGTKEDTPNRVAISSVIASVVLLIIADIGRRRSRSSLLRLYAVLSSLALLLFTATLANRYSLLKVIQYFSNRGTSSFDVDFPSLQTGLLVYILTFSLFKISTIKAVVFLLFNMTPPKKAS 179
BLAST of Vfaba.Hedin2.R1.1g450920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A396I2G0|A0A396I2G0_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr4g0018291 PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 1.575e-60 Identity = 131/179 (73.18%), Postives = 143/179 (79.89%), Query Frame = 0 Query: 1 MQQR-----RPSGTDGSDYSYRMVVDSRYQLVAKGKTR---------------VVFAVLPGKKDGTTNIVAISSVIASLVLLIIGDLGRRRSRSSLLRLYTILSSLAMLLFTASLANQYSLLKVIQYFSKRETSNFDVDYLALQTGLLVYILTLYLFKISVIKAVVFLLFNMTPPKKAS 159 MQQR RPSGTDGSDYSYRMVVDSRYQLVAKGK R V+FA LPG K+ T N VAISSVIAS+VLLII D+GRRRSRSSLLRLY +LSSLA+LLF A+LAN+YSLLKVIQYFS R TS+FD D+ +LQTGLLVYILT LFKI+ IKAVVFLLFNMTPPKKAS Sbjct: 1 MQQRKSALGRPSGTDGSDYSYRMVVDSRYQLVAKGKKRLSVLFIIEALFLLIGVIFAFLPGIKEDTPNTVAISSVIASVVLLIIADIGRRRSRSSLLRLYAVLSSLALLLFAATLANRYSLLKVIQYFSNRGTSSFDADFPSLQTGLLVYILTFSLFKITTIKAVVFLLFNMTPPKKAS 179
BLAST of Vfaba.Hedin2.R1.1g450920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VXP8|A0A1S3VXP8_VIGRR (uncharacterized protein LOC106779537 OS=Vigna radiata var. radiata OX=3916 GN=LOC106779537 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.156e-50 Identity = 97/180 (53.89%), Postives = 117/180 (65.00%), Query Frame = 0 Query: 1 MQQR-----RPSGTDGSDYSYRMVVDSRYQLVAKGKTRV---------------VFAVLPGKKDGTTNIVAISSVIASLVLLIIGDLGRRRSRSSLLRLYTILSSLAMLLFTASLANQYSLLKVIQYFSKRETSNFDVDYLA-LQTGLLVYILTLYLFKISVIKAVVFLLFNMTPPKKAS 159 MQ R RPSGTDGSDYS+RMVVDSRYQLVAKGK R+ +FA PG + T N VA SSV S+V LIIG++GRRRSR LLR Y I+SS+AMLL ASLA ++ LLK IQ +D + L+ Q GLL+Y++TL + K+ +KAVV LLFNM PPKK S Sbjct: 1 MQNRKLASGRPSGTDGSDYSFRMVVDSRYQLVAKGKKRLSLHFITEAALLLIGAIFAYFPGIEADTPNTVAYSSVFISVVSLIIGNIGRRRSRPGLLRFYAIVSSIAMLLLIASLAKKHLLLKAIQDSKLWRAGKYDANDLSHFQIGLLLYLVTLSVLKLCTVKAVVSLLFNMAPPKKTS 180
BLAST of Vfaba.Hedin2.R1.1g450920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A444X172|A0A444X172_ARAHY (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g102008 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.383e-50 Identity = 107/180 (59.44%), Postives = 123/180 (68.33%), Query Frame = 0 Query: 1 MQQR-----RPSGTDGSDYSYRMVVDSRYQLVAKGKTR---------------VVFAVLPGKKDGTTNIVAISSVIASLVLLIIGDLGRRRSRSSLLRLYTILSSLAMLLFTASLANQYSLLKVIQYFSKRETSNFDVD-YLALQTGLLVYILTLYLFKISVIKAVVFLLFNMTPPKKAS 159 MQQR RPSGTDGSDYSYRMVVDSRYQLVAKGK R V+FAVLP K T N VA+SS + S + L I ++GRRRSR+SLLR Y+++SSLA++ T SL QYSLLK IQ F + TS FD D + Q GLLVYI TL LFKI IKAV LL+NM+PPKKAS Sbjct: 1 MQQRKAGLGRPSGTDGSDYSYRMVVDSRYQLVAKGKQRLSRLFIFQGLFLLMGVIFAVLPAMKKDTPNRVALSSALVSFISLAIAEIGRRRSRASLLRFYSVISSLAVISLTMSLVKQYSLLKAIQDFGLKGTSMFDADNFPGFQVGLLVYIFTLLLFKIITIKAVTSLLYNMSPPKKAS 180
BLAST of Vfaba.Hedin2.R1.1g450920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4BL57|A0A6P4BL57_ARADU (uncharacterized protein LOC107469150 OS=Arachis duranensis OX=130453 GN=LOC107469150 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.253e-49 Identity = 106/180 (58.89%), Postives = 123/180 (68.33%), Query Frame = 0 Query: 1 MQQR-----RPSGTDGSDYSYRMVVDSRYQLVAKGKTR---------------VVFAVLPGKKDGTTNIVAISSVIASLVLLIIGDLGRRRSRSSLLRLYTILSSLAMLLFTASLANQYSLLKVIQYFSKRETSNFDVD-YLALQTGLLVYILTLYLFKISVIKAVVFLLFNMTPPKKAS 159 MQQR RPSGTDGSDYSYRMVVDSRYQLVAKGK R V+FAVLP K T N VA+SS + S + L I ++GRRRSR+SLLR Y+++SSLA++ T SL QYSLLK IQ F + TS FD D + Q GLLVYI +L LFKI IKAV LL+NM+PPKKAS Sbjct: 1 MQQRKTGLGRPSGTDGSDYSYRMVVDSRYQLVAKGKQRLSRLFIFQGLFLLMGVIFAVLPAMKKDTPNRVALSSALVSFISLAIAEIGRRRSRASLLRFYSVISSLAVVSLTMSLVKQYSLLKAIQDFGLKGTSMFDADNFPGFQVGLLVYIFSLLLFKIITIKAVTSLLYNMSPPKKAS 180
BLAST of Vfaba.Hedin2.R1.1g450920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4NWL5|A0A6A4NWL5_LUPAL (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00028973 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.481e-48 Identity = 86/171 (50.29%), Postives = 117/171 (68.42%), Query Frame = 0 Query: 5 RPSGTDGSDYSYRMVVDSRYQLVAKGKTR---------------VVFAVLPGKKDGTTNIVAISSVIASLVLLIIGDLGRRRSRSSLLRLYTILSSLAMLLFTASLANQYSLLKVIQYFSKRETSNFDVDYLA-LQTGLLVYILTLYLFKISVIKAVVFLLFNMTPPKKAS 159 RPSGTDGSDYSYRMVVDSRYQLVAK K V+ A++ ++ N +A SS+I + + L+I ++GRRRSR++LLR Y ++SS+A+ LF ASLA QYSL + I+ FS +T+ FD + + Q GLL+Y+ TL +F I ++AV+ LLFNM+PPKKAS Sbjct: 11 RPSGTDGSDYSYRMVVDSRYQLVAKWKKHLSLLFIIQGVFVLIGVIIAIVSATQNNNLNTIAFSSLIVTALSLLIAEIGRRRSRATLLRFYVVVSSIAIFLFIASLAMQYSLHQAIKDFSFGKTTKFDAAHFSGFQAGLLLYLFTLSVFNIYTVRAVLSLLFNMSPPKKAS 181
BLAST of Vfaba.Hedin2.R1.1g450920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SA76|A0A0S3SA76_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G081600 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.403e-46 Identity = 96/180 (53.33%), Postives = 117/180 (65.00%), Query Frame = 0 Query: 1 MQQR-----RPSGTDGSDYSYRMVVDSRYQLVAKGKTRV---------------VFAVLPGKKDGTTNIVAISSVIASLVLLIIGDLGRRRSRSSLLRLYTILSSLAMLLFTASLANQYSLLKVIQYFSKRETSNFDVDYLA-LQTGLLVYILTLYLFKISVIKAVVFLLFNMTPPKKAS 159 MQ R RPSGTDGSDYS+RMVVDSRYQLVAKGK R+ +FA PG + T N VA SSV S+V LIIG++GRRRSR LLR Y I+SS+AMLL SLA ++ LLK IQ +DV+ L+ Q GL++Y++TL + K+ +KAVV LLFNM PPKK S Sbjct: 1 MQNRKLASGRPSGTDGSDYSFRMVVDSRYQLVAKGKKRLSLHFIIEAALLFIGSIFAYFPGIEADTPNTVAYSSVFVSVVSLIIGNIGRRRSRPGLLRFYAIVSSIAMLLLVVSLAKKHLLLKAIQDSKLWRAGKYDVNDLSHFQIGLVLYLVTLSVLKLCTVKAVVSLLFNMAPPKKTS 180
BLAST of Vfaba.Hedin2.R1.1g450920.1 vs. UniProtKB/TrEMBL
Match: tr|C6T493|C6T493_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 5.304e-44 Identity = 100/180 (55.56%), Postives = 117/180 (65.00%), Query Frame = 0 Query: 1 MQQR-----RPSGTDGSDYSYRMVVDSRYQLVAKGK--------TRVVF-------AVLPGKKDGTTNIVAISSVIASLVLLIIGDLGRRRSRSSLLRLYTILSSLAMLLFTASLANQYSLLKVIQYFSKRETSNFDVDYLA-LQTGLLVYILTLYLFKISVIKAVVFLLFNMTPPKKAS 159 MQ R RPSGTDGSDYSYRMVVDSRYQLVAKGK T V A LPG + N VA SSVI S+V LIIG++GR RSRS LLR Y ++SS+ MLL ASLA Q+ LLK IQ T +DV+ L+ Q GLL+Y++TL + K+ +KAV FLLFNM PPKK S Sbjct: 1 MQHRKLTSGRPSGTDGSDYSYRMVVDSRYQLVAKGKKYLSLHFITEAVLLLIGATLAYLPGIEADAPNTVAYSSVIVSVVSLIIGNIGRGRSRSGLLRFYAVVSSIVMLLLIASLATQHLLLKAIQDSKLWRTGKYDVNDLSHFQIGLLLYMVTLSVLKLCTVKAVAFLLFNMVPPKKTS 180
BLAST of Vfaba.Hedin2.R1.1g450920.1 vs. Araport11
Match: AT5G51510.1 (| jagunal-like protein | Chr5:20921512-20922818 FORWARD LENGTH=170 | 201606) HSP 1 Score: 98.2117 bits (243), Expect = 2.587e-26 Identity = 70/180 (38.89%), Postives = 97/180 (53.89%), Query Frame = 0 Query: 1 MQQR-----RPSGTDGSDYSYRMVVDSRYQLVAKGKTR---VVF------------AVLPGKKDGTTNIVAISSVIASLVLLIIGDLGRRRSRSSLLRLYTILSSLAMLLFTASLANQYSLLKVIQYFSKRETSNFDV-DYLALQTGLLVYILTLYLFKISVIKAVVFLLFNMTPPKKAS 159 MQQR RPSGTDGSD+SYRMVVDSRY V K K R ++F A L K N +AI++ +A LV +IG+LG RRSR +LLRLYT S++ M+L + S L + + S T+ ++ ++ Q G +V IL + + L+ NM+PP KA+ Sbjct: 1 MQQRKPTAGRPSGTDGSDFSYRMVVDSRYTKVTKEKARLRPLIFVQAAIYVIGLSCAFLTTTKKDEKNTLAIAAAVAGLVCSLIGELGCRRSRVNLLRLYTAASTIVMVL--SVFCAVRSRLTMEERNSSGTTAKLELAGFICAQLGAVVQILAIIVTG--------SLVNNMSPPTKAA 170 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.1g450920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.1g450920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Hedin2.R1.1g450920.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.1g450920.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g450920.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g450920.1; organism=Vicia faba; type=mRNA; length=480bpback to top protein sequence of Vfaba.Hedin2.R1.1g450920.1_vfh_v1 >Vfaba.Hedin2.R1.1g450920.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g450920.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g450920.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=159bpback to top mRNA from alignment at chr1L:1587612876..1587613951+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.1g450920.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g450920.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g450920.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1L:1587612876..1587613951+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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