Vfaba.Hedin2.R1.2g126640.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.2g126640.1 vs. UniProtKB/TrEMBL
Match: tr|G7J684|G7J684_MEDTR (Myosin heavy chain-like protein OS=Medicago truncatula OX=3880 GN=11427828 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 7.447e-69 Identity = 113/165 (68.48%), Postives = 123/165 (74.55%), Query Frame = 0 Query: 16 QPADQEILTKRDYINFNSHPSLTKILHKQGDQEVLFADKLLKFTSSGKMKSRILLITDFAIYIVDPEIDSLKRRIALAAVDKICIT----------------------------------TRKASDYELEVVSSNRFEYNAQSDLVKEIEFEEVEGGVKTRILRK 146
Q D+ IL+KRDYIN +SHP+L KIL KQGDQEVLFADK+LKFTSSGKMKSRILLITDFAIYIVDPE+DSLKRRIALAAVDK+C++ T K+SDYELEVVSSNRFEYNA SDLVKEIEFEEVEGGVKTRILRK
Sbjct: 6 QINDEPILSKRDYINIHSHPNLIKILRKQGDQEVLFADKVLKFTSSGKMKSRILLITDFAIYIVDPELDSLKRRIALAAVDKLCLSKLNDNFLAVIVPSEYDLLLASARKMEIVIAFNEATMKSSDYELEVVSSNRFEYNAASDLVKEIEFEEVEGGVKTRILRK 170
BLAST of Vfaba.Hedin2.R1.2g126640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YD51|A0A1S2YD51_CICAR (myosin IB heavy chain OS=Cicer arietinum OX=3827 GN=LOC101497538 PE=4 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.382e-67 Identity = 119/181 (65.75%), Postives = 128/181 (70.72%), Query Frame = 0 Query: 3 TPDQIDGEQSSPVQPA---DQEILTKRDYINFNSHPSLTKILHKQGDQEVLFADKLLKFTSSGKMKSRILLITDFAIYIVDPEIDSLKRRIALAAVDKICIT----------------------------------TRKASDYELEVVSSNRFEYNAQSDLVKEIEFEEVEGGVKTRILRK 146
TP D ++SSPVQP DQ+ L K D+IN S+ L KI+ KQGDQEVLFADK+LKFTSSGKMK RILLITDFAIYIVDPEIDSLKRRIALAAVDKIC++ TRKASDYELEVVSSNRFEYNA SDLVKEIEFEEVEGGVKTRILRK
Sbjct: 11 TPKFDDDDESSPVQPHEPDDQKKLAKGDHINVPSYHFLNKIMQKQGDQEVLFADKVLKFTSSGKMKCRILLITDFAIYIVDPEIDSLKRRIALAAVDKICLSKLNDNFLAVIIPTEYDLLLASARKTEIVTAFVEATRKASDYELEVVSSNRFEYNAASDLVKEIEFEEVEGGVKTRILRK 191
BLAST of Vfaba.Hedin2.R1.2g126640.1 vs. UniProtKB/TrEMBL
Match: tr|I3SL25|I3SL25_LOTJA (TH1 domain-containing protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.392e-63 Identity = 112/186 (60.22%), Postives = 126/186 (67.74%), Query Frame = 0 Query: 2 PTP-----DQIDGEQSSPVQPAD--QEILTKRDYINFNSHPSLTKILHKQGDQEVLFADKLLKFTSSGKMKSRILLITDFAIYIVDPEIDSLKRRIALAAVDKICIT----------------------------------TRKASDYELEVVSSNRFEYNAQSDLVKEIEFEEVEGGVKTRILRK 146
PTP D + G P QP D ++ K D++N SHP LTKILHKQGDQ+VLFADK+LKFT SGKMK+RILLITDFA+YIVDPE DSLKRRIALAAV+KIC++ TRKASDYELEVV SNRFEYNA SDLVKEIEFEEVEGGVKTRI+R+
Sbjct: 11 PTPPTTQDDDVHG-GDDPSQPDDVQDKLPCKGDHLNVPSHPYLTKILHKQGDQQVLFADKVLKFTGSGKMKTRILLITDFAMYIVDPETDSLKRRIALAAVEKICLSKLSDNFLAVIIPTEYDLLIASARKSEIVAAFVEATRKASDYELEVVCSNRFEYNAASDLVKEIEFEEVEGGVKTRIIRQ 195
BLAST of Vfaba.Hedin2.R1.2g126640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371EYP1|A0A371EYP1_MUCPR (Myosin ID heavy chain (Fragment) OS=Mucuna pruriens OX=157652 GN=myoD PE=4 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 3.444e-62 Identity = 109/173 (63.01%), Postives = 119/173 (68.79%), Query Frame = 0 Query: 2 PTPDQIDGEQSSPVQPADQEILTKRDYINFNSHPSLTKILHKQGDQEVLFADKLLKFTSSGKMKSRILLITDFAIYIVDPEIDSLKRRIALAAVDKIC----------------------------ITTRKASDYELEVVSSNRFEYNAQSDLVKEIEFEEVEGGVKTRILRK 146
P D + E SSPVQP DQ+ KRDYI+ SHP L K+L+KQGDQ VLFADK+LKFT SGKMK+RILLITDFA+YI DPE SLKRRIALAAV+KIC I T YELEVVSSNRFEYNA SD+VKEIEFEEVEGGVKTRILRK
Sbjct: 52 PQNDDVPDEDSSPVQPDDQDKPRKRDYIHVPSHPHLMKLLNKQGDQIVLFADKVLKFTGSGKMKNRILLITDFAVYIADPESSSLKRRIALAAVEKICLSELTDNFLAIIIPTEYDLLIASARKNEIITAFYEAYELEVVSSNRFEYNAASDMVKEIEFEEVEGGVKTRILRK 224
BLAST of Vfaba.Hedin2.R1.2g126640.1 vs. UniProtKB/TrEMBL
Match: tr|G7J685|G7J685_MEDTR (Myosin heavy chain-like protein OS=Medicago truncatula OX=3880 GN=11427828 PE=4 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 4.432e-61 Identity = 104/156 (66.67%), Postives = 114/156 (73.08%), Query Frame = 0 Query: 16 QPADQEILTKRDYINFNSHPSLTKILHKQGDQEVLFADKLLKFTSSGKMKSRILLITDFAIYIVDPEIDSLKRRIALAAVDKICIT----------------------------------TRKASDYELEVVSSNRFEYNAQSDLVKEIEFEEVEG 137
Q D+ IL+KRDYIN +SHP+L KIL KQGDQEVLFADK+LKFTSSGKMKSRILLITDFAIYIVDPE+DSLKRRIALAAVDK+C++ T K+SDYELEVVSSNRFEYNA SDLVKEIEFEEVEG
Sbjct: 6 QINDEPILSKRDYINIHSHPNLIKILRKQGDQEVLFADKVLKFTSSGKMKSRILLITDFAIYIVDPELDSLKRRIALAAVDKLCLSKLNDNFLAVIVPSEYDLLLASARKMEIVIAFNEATMKSSDYELEVVSSNRFEYNAASDLVKEIEFEEVEG 161
BLAST of Vfaba.Hedin2.R1.2g126640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151TGV6|A0A151TGV6_CAJCA (Myosin IB heavy chain OS=Cajanus cajan OX=3821 GN=KK1_012555 PE=4 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.979e-59 Identity = 105/176 (59.66%), Postives = 117/176 (66.48%), Query Frame = 0 Query: 2 PTPDQIDGEQSSPV---QPADQEILTKRDYINFNSHPSLTKILHKQGDQEVLFADKLLKFTSSGKMKSRILLITDFAIYIVDPEIDSLKRRIALAAVDKIC----------------------------ITTRKASDYELEVVSSNRFEYNAQSDLVKEIEFEEVEGGVKTRILRK 146
P + + SSPV QP DQE + KRDYI+ SHP + KIL+KQGDQ VLFADK+ KFT SGKMK R +LITDFA+YIVDPE DSLKRRIALAAV+KIC I T YEL+VV SNRF+YNA SDLVKEIEFEEVEGGVKTRILRK
Sbjct: 15 PQNGDVPDDDSSPVSQDQPQDQEKIRKRDYIDLPSHPYIMKILNKQGDQIVLFADKVWKFTGSGKMKCRFMLITDFAVYIVDPETDSLKRRIALAAVEKICLSELSDNFLAVIVPTEYDLLIASARKNEIITAFVEAYELDVVPSNRFQYNAASDLVKEIEFEEVEGGVKTRILRK 190
BLAST of Vfaba.Hedin2.R1.2g126640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7H4Y8|A0A1J7H4Y8_LUPAN (TH1 domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_18256 PE=4 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 8.166e-59 Identity = 101/153 (66.01%), Postives = 113/153 (73.86%), Query Frame = 0 Query: 24 TKRDYINFNSHPSLTKILHKQGDQEVLFADKLLKFTSSGKMKSRILLITDFAIYIVDPEIDSLKRRIALAAVDKICI---------------------TTRK---------ASDYELEVVSSNRFEYNAQSDLVKEIEFEEVEGGVKTRILRK 146
+K D+IN SHPSL KI++KQGDQ VLFADK+LKFT SGK+K RILLITDFA+YIVDP+ SLKRRIALAA+DKIC+ +TRK ASDYELEVVSSNRFEYNA SDLVKEIEFEEVEGG+KTRILRK
Sbjct: 24 SKGDHINVLSHPSLMKIMNKQGDQLVLFADKVLKFTGSGKIKCRILLITDFAVYIVDPDTGSLKRRIALAALDKICVSELNDNFFAVVIPTEYDLLMASTRKNEILYAIKTASDYELEVVSSNRFEYNAASDLVKEIEFEEVEGGIKTRILRK 176
BLAST of Vfaba.Hedin2.R1.2g126640.1 vs. UniProtKB/TrEMBL
Match: tr|V7AVB2|V7AVB2_PHAVU (TH1 domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G135700g PE=4 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 9.458e-59 Identity = 104/171 (60.82%), Postives = 120/171 (70.18%), Query Frame = 0 Query: 5 DQIDGEQSSPVQPAD-QEILTKRDYINFNSHPSLTKILHKQGDQEVLFADKLLKFTSSGKMKSRILLITDFAIYIVDPEIDSLKRRIALAAVDKICIT----------------------------TRKASDYELEVVSSNRFEYNAQSDLVKEIEFEEVEGGVKTRILRK 146
D + ++SSPVQ + +E L KRDYI+ SHP+L ++L+KQGDQ VLFADK+LKFT SGKMK R L+ITDFAIYI+DPE DSLKRRIALAAV+KIC++ T YE EVVSSNRFEYNA SDLVKEIEFEEVEGGVKTRILRK
Sbjct: 13 DDVPKDESSPVQHDEPEEKLRKRDYIDIFSHPNLMRLLNKQGDQIVLFADKVLKFTGSGKMKYRFLMITDFAIYIIDPETDSLKRRIALAAVEKICVSELTDNFLAVIIPTEYDLLIASARKNEIITAFVEAYEPEVVSSNRFEYNAASDLVKEIEFEEVEGGVKTRILRK 183
BLAST of Vfaba.Hedin2.R1.2g126640.1 vs. UniProtKB/TrEMBL
Match: tr|T2DMM7|T2DMM7_PHAVU (Myosin ID heavy chain-like protein OS=Phaseolus vulgaris OX=3885 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.370e-58 Identity = 103/171 (60.23%), Postives = 120/171 (70.18%), Query Frame = 0 Query: 5 DQIDGEQSSPVQPAD-QEILTKRDYINFNSHPSLTKILHKQGDQEVLFADKLLKFTSSGKMKSRILLITDFAIYIVDPEIDSLKRRIALAAVDKICIT----------------------------TRKASDYELEVVSSNRFEYNAQSDLVKEIEFEEVEGGVKTRILRK 146
D + ++SSPVQ + +E L KRDY++ SHP+L ++L+KQGDQ VLFADK+LKFT SGKMK R L+ITDFAIYI+DPE DSLKRRIALAAV+KIC++ T YE EVVSSNRFEYNA SDLVKEIEFEEVEGGVKTRILRK
Sbjct: 13 DDVPKDESSPVQHDEPEEKLRKRDYMDIFSHPNLMRLLNKQGDQIVLFADKVLKFTGSGKMKYRFLMITDFAIYIIDPETDSLKRRIALAAVEKICVSELTDNFLAVIIPTEYDLLIASARKNEIITAFVEAYEPEVVSSNRFEYNAASDLVKEIEFEEVEGGVKTRILRK 183
BLAST of Vfaba.Hedin2.R1.2g126640.1 vs. UniProtKB/TrEMBL
Match: tr|I1KAM1|I1KAM1_SOYBN (TH1 domain-containing protein OS=Glycine max OX=3847 GN=100810423 PE=4 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.636e-58 Identity = 108/167 (64.67%), Postives = 117/167 (70.06%), Query Frame = 0 Query: 8 DGEQSSPVQPADQEILTKRDYINFNSHPSLTKILHKQGDQEVLFADKLLKFTSSGKMKSRILLITDFAIYIVDPEIDSLKRRIALAAVDKIC----------------------------ITTRKASDYELEVVSSNRFEYNAQSDLVKEIEFEEVEGGVKTRILRK 146
DG+ SSPV+P + L KRD+IN SHP L K+L+KQGDQ VLFADK+LKFT SGKMK RILLITDFAIYIVDPE DSLKRRIALAAV+KI I T YEL+VVSSNRFEYNA SDLVKEIEFEEVEGGVKTRILRK
Sbjct: 17 DGD-SSPVEP---DKLRKRDHINVPSHPFLMKLLNKQGDQIVLFADKVLKFTGSGKMKCRILLITDFAIYIVDPETDSLKRRIALAAVEKIYLSELSDNFLAVIIPTEYDLLIASARKNEIITAFVEAYELDVVSSNRFEYNAASDLVKEIEFEEVEGGVKTRILRK 179
BLAST of Vfaba.Hedin2.R1.2g126640.1 vs. Araport11
Match: AT5G53310.1 (| myosin heavy chain-like protein | Chr5:21634657-21636094 FORWARD LENGTH=210 | 201606) HSP 1 Score: 151.754 bits (382), Expect = 4.970e-47 Identity = 81/193 (41.97%), Postives = 113/193 (58.55%), Query Frame = 0 Query: 2 PTPD--------QIDGEQSSPV------QPADQEILTKRDYINFNSHPSLTKILHKQGDQEVLFADKLLKFTSSGKMKSRILLITDFAIYIVDPEIDSLKRRIALAAVDKICIT----------------------------------TRKASDYELEVVSSNRFEYNAQSDLVKEIEFEEVEGGVKTRILRK 146
P PD ++DG +P + A + + DY++ +S P L +IL KQGD +LFADK+LKFT SGKMK RI ++TDFAIY++DPE +++ RRIAL++V+K+C++ T+ ASDYELEV+ SNRFEYNA + LVKE+ FEE EGG+KT+ + K
Sbjct: 18 PPPDFDEDRSVGEVDGGDHTPFAGGKVRRKASRYREHRGDYLHVSSRPGLMRILEKQGDTSILFADKVLKFTGSGKMKRRIFILTDFAIYLIDPETEAMTRRIALSSVEKMCLSKLSDNFFAIIIPTEYDLFMASTRKTELVQVMVDVTKSASDYELEVLLSNRFEYNASASLVKEVSFEESEGGIKTKFVWK 210
BLAST of Vfaba.Hedin2.R1.2g126640.1 vs. Araport11
Match: AT5G53310.2 (| myosin heavy chain-like protein | Chr5:21634657-21635540 FORWARD LENGTH=187 | 201606) HSP 1 Score: 113.62 bits (283), Expect = 2.977e-32 Identity = 63/165 (38.18%), Postives = 91/165 (55.15%), Query Frame = 0 Query: 2 PTPD--------QIDGEQSSPV------QPADQEILTKRDYINFNSHPSLTKILHKQGDQEVLFADKLLKFTSSGKMKSRILLITDFAIYIVDPEIDSLKRRIALAAVDKICIT----------------------------------TRKASDYELEVVSSNRF 118
P PD ++DG +P + A + + DY++ +S P L +IL KQGD +LFADK+LKFT SGKMK RI ++TDFAIY++DPE +++ RRIAL++V+K+C++ T+ ASDYELEV+ SNR+
Sbjct: 18 PPPDFDEDRSVGEVDGGDHTPFAGGKVRRKASRYREHRGDYLHVSSRPGLMRILEKQGDTSILFADKVLKFTGSGKMKRRIFILTDFAIYLIDPETEAMTRRIALSSVEKMCLSKLSDNFFAIIIPTEYDLFMASTRKTELVQVMVDVTKSASDYELEVLLSNRY 182 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.2g126640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.2g126640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.2g126640.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.2g126640.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g126640.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g126640.1; organism=Vicia faba; type=mRNA; length=441bpback to top protein sequence of Vfaba.Hedin2.R1.2g126640.1_vfh_v1 >Vfaba.Hedin2.R1.2g126640.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g126640.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g126640.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=146bpback to top mRNA from alignment at chr2:766333177..766335940+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.2g126640.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g126640.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g126640.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:766333177..766335940+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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