Vfaba.Hedin2.R1.2g126920.1

Transcript Overview
NameVfaba.Hedin2.R1.2g126920.1
Unique NameVfaba.Hedin2.R1.2g126920.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length570
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr2chromosomechr2:769933788..769934603 -Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR207Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR248Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL570Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL285Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL404Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL1007Cajanus cajan Asha genome v1.0Cajanus cajan
crvfhL520Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL812Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL425Pisum sativum Cameor genome v1aPisum sativum
psvfhL463Pisum sativum Cameor genome v1aPisum sativum
psvfhL496Pisum sativum Cameor genome v1aPisum sativum
vfhvfhR125Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL144Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL214Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR290Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvfhL0322Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivfhL557Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0368Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0748Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvssR233Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR275Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR279Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvfhL235Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL355Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL577Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL745Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL239Cicer arietinum
carvfhL337Cicer arietinum
ccavfhL298Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL479Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR290Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR221Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR293Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL252Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR239Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR262Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL795Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR272Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_004502542.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-TanjilR_14080Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
LR48_mrnaVigan04g163700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
jg54439.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat5g080400.1Pisum sativum Cameor genome v1aPisum sativum
Cc_v2.0_06401.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Phvul.009G136500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_02G01221.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Va04G052050.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cr_12227.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigun09g154300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun09g154300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_012548Cajanus cajan Asha genome v1.0Cajanus cajan
XM_058930843.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigan.02G150400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Ca_03943Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigst.02G111500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Psat05G0245500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_13983.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
PvulFLAVERTChr09.929Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-TanjilR_19897Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr09.2133Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.2g103320.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g126920Vfaba.Hedin2.R1.2g126920_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g126920.1_vfh_v1-exonVfaba.Hedin2.R1.2g126920.1_vfh_v1-exon-chr2_vfh_v1:769933788..769934097Vicia fabaexon
Vfaba.Hedin2.R1.2g126920.1_vfh_v1-exonVfaba.Hedin2.R1.2g126920.1_vfh_v1-exon-chr2_vfh_v1:769934220..769934278Vicia fabaexon
Vfaba.Hedin2.R1.2g126920.1_vfh_v1-exonVfaba.Hedin2.R1.2g126920.1_vfh_v1-exon-chr2_vfh_v1:769934403..769934603Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g126920.1_vfh_v1-cdsVfaba.Hedin2.R1.2g126920.1_vfh_v1-cds-chr2_vfh_v1:769933788..769934097Vicia fabaCDS
Vfaba.Hedin2.R1.2g126920.1_vfh_v1-cdsVfaba.Hedin2.R1.2g126920.1_vfh_v1-cds-chr2_vfh_v1:769934220..769934278Vicia fabaCDS
Vfaba.Hedin2.R1.2g126920.1_vfh_v1-cdsVfaba.Hedin2.R1.2g126920.1_vfh_v1-cds-chr2_vfh_v1:769934403..769934603Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g126920.1_vfh_v1Vfaba.Hedin2.R1.2g126920.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.2g126920.1_vfh_v1Vfaba.Hedin2.R1.2g126920.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.2g126920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YDJ0|A0A1S2YDJ0_CICAR (protein MKS1 OS=Cicer arietinum OX=3827 GN=LOC101495243 PE=4 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 4.289e-64
Identity = 138/241 (57.26%), Postives = 156/241 (64.73%), Query Frame = 0
Query:    1 MDQFPYIPSGRSPKRELQGPRPTPLRIHKDSRKINKPPLAPPQLQQQQKQHHQPPRQPIIIYTVSPKILSI-------------------------------------LFTVTEQYHP-------RRVMPRTS---DV----VSDMEGIELMNHGV-ERGNMMFQGILSPGPASLSPIPANFFSPPSSDPNMFSNLLQDFSPALLSSRNFMEPGANFFLPSPSNFVSPQTPSIDLFNYFLD 189
            M+  P I +GRSP+RELQGPRPTPLRIHKDS KI+K P  PP  QQQQ+     PRQPIIIYTVSPK++                                         TV +   P       +RV+P TS   DV    V ++E ++LMNHG+ ERGNMMFQGILSPGPASLSPIP+NFFSPPSSDPNM +N L DFSP L SSRNFME GANFFLPSPSNFVSP TP+IDLFNYFLD
Sbjct:    1 MNHLPDISTGRSPRRELQGPRPTPLRIHKDSHKISKKPPLPPPQQQQQQP----PRQPIIIYTVSPKVIHTTPGDFMNLVQRLTGSTSSSSSNIDPFNGDGTISPAARYATVEKAMSPLGKKQVQQRVVPITSTNHDVIMNDVHELEQVQLMNHGILERGNMMFQGILSPGPASLSPIPSNFFSPPSSDPNMVNNFLHDFSPVLHSSRNFMEGGANFFLPSPSNFVSPHTPTIDLFNYFLD 237          
BLAST of Vfaba.Hedin2.R1.2g126920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NUI6|A0A2Z6NUI6_TRISU (VQ domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_404310 PE=4 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.518e-54
Identity = 95/106 (89.62%), Postives = 98/106 (92.45%), Query Frame = 0
Query:   88 TSDVVSDMEGIE---LMNHGVERGNMMFQGILSPGPASLSPIPANFFSPPSSDPNMFSNLLQDFSPALLSSRNFMEPGANFFLPSPSNFVSP-QTPSIDLFNYFLD 189
            TSDV+SDMEGIE   LMNHGVERGNMMFQGILSPGPASLSPIP+NFFSPPSSDPNMFSNLLQD SPALLSSR+FME G NFFLPSPSNFVSP  TPSIDLFNYFLD
Sbjct:  148 TSDVISDMEGIEQVQLMNHGVERGNMMFQGILSPGPASLSPIPSNFFSPPSSDPNMFSNLLQDLSPALLSSRHFMEGGPNFFLPSPSNFVSPAHTPSIDLFNYFLD 253          

HSP 2 Score: 71.2478 bits (173), Expect = 1.673e-11
Identity = 50/70 (71.43%), Postives = 56/70 (80.00%), Query Frame = 0
Query:    1 MDQFPYIPSGRSPKRELQGPRPTPLRIHKDSRKINK-PPLAPPQLQQQQKQHHQPPRQPIIIYTVSPKIL 69
            M+QFP IP+GRSP+RELQGPRPTPLRIHKDS KI K P     Q QQ Q+Q   PPRQPIIIYTVSPK++
Sbjct:    1 MNQFPDIPTGRSPRRELQGPRPTPLRIHKDSHKIKKPPLAPQQQQQQPQQQQQLPPRQPIIIYTVSPKVI 70          
BLAST of Vfaba.Hedin2.R1.2g126920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PEA4|A0A2K3PEA4_TRIPR (Protein MKS1 OS=Trifolium pratense OX=57577 GN=L195_g010284 PE=4 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.040e-53
Identity = 93/105 (88.57%), Postives = 97/105 (92.38%), Query Frame = 0
Query:   90 DVVSDMEGIE---LMNHGVERGNMMFQGILSPGPASLSPIPANFFSPPSSDPNMFSNLLQDFSPALLSSRNFMEPGANFFLPSPSNFVSPQ--TPSIDLFNYFLD 189
            DV+SDMEGIE    MNHGVERGNMMFQGILSPGPASLSPIP+NFFSPPSSDPNMFSNLLQDFSPALLSSR+FME G NFFLPSPSNF+SPQ  TPSIDLFNYFLD
Sbjct:  150 DVISDMEGIEQVQYMNHGVERGNMMFQGILSPGPASLSPIPSNFFSPPSSDPNMFSNLLQDFSPALLSSRHFMEGGPNFFLPSPSNFISPQAHTPSIDLFNYFLD 254          

HSP 2 Score: 70.8626 bits (172), Expect = 3.181e-11
Identity = 50/70 (71.43%), Postives = 56/70 (80.00%), Query Frame = 0
Query:    1 MDQFPYIPSGRSPKRELQGPRPTPLRIHKDSRKINK-PPLAPPQLQQQQKQHHQPPRQPIIIYTVSPKIL 69
            M+QFP IP+GRSP+RELQGPRPTPLRIHKDS KI K P     Q QQQ +Q   PPRQPIIIYTVSPK++
Sbjct:    1 MNQFPDIPTGRSPRRELQGPRPTPLRIHKDSHKIKKPPLAPQQQQQQQHQQQLPPPRQPIIIYTVSPKVI 70          
BLAST of Vfaba.Hedin2.R1.2g126920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A396IY47|A0A396IY47_MEDTR (VQ domain-containing protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr3g0126211 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 3.905e-52
Identity = 90/104 (86.54%), Postives = 93/104 (89.42%), Query Frame = 0
Query:   88 TSDVVSDMEGIE---LMNHGVERGNMMFQGILSPGPASLSPIPANFFSPPSSDPNMFSNLLQDFSPALLSSRNFMEPGANFFLPSPSNFVSPQTPSIDLFNYFL 188
            TSDV+SDMEGIE   LMNHGVERGNMMFQGILSPGPASLSPIP+NFFSPPSSDPNMF+N L D SPAL S RNFME GANF LPSPSNFVSP TPSIDLFNYFL
Sbjct:  144 TSDVISDMEGIEQTQLMNHGVERGNMMFQGILSPGPASLSPIPSNFFSPPSSDPNMFNNFLHDLSPALHSGRNFMEGGANFLLPSPSNFVSPITPSIDLFNYFL 247          

HSP 2 Score: 72.4034 bits (176), Expect = 6.804e-12
Identity = 49/69 (71.01%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    1 MDQFPYIPSGRSPKRELQGPRPTPLRIHKDSRKINKPPLAPPQLQQQQKQHHQPPRQPIIIYTVSPKIL 69
            M+QFP IP+GRSP+RELQGPRPTPLRIHKDS KI K        QQQQ+Q +Q PRQPIIIYTVSPK++
Sbjct:    1 MNQFPDIPTGRSPRRELQGPRPTPLRIHKDSHKIKK--PPLAPQQQQQQQQYQQPRQPIIIYTVSPKVI 67          
BLAST of Vfaba.Hedin2.R1.2g126920.1 vs. UniProtKB/TrEMBL
Match: tr|G7J659|G7J659_MEDTR (MKS1-like protein OS=Medicago truncatula OX=3880 GN=11414826 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 3.905e-52
Identity = 90/104 (86.54%), Postives = 93/104 (89.42%), Query Frame = 0
Query:   88 TSDVVSDMEGIE---LMNHGVERGNMMFQGILSPGPASLSPIPANFFSPPSSDPNMFSNLLQDFSPALLSSRNFMEPGANFFLPSPSNFVSPQTPSIDLFNYFL 188
            TSDV+SDMEGIE   LMNHGVERGNMMFQGILSPGPASLSPIP+NFFSPPSSDPNMF+N L D SPAL S RNFME GANF LPSPSNFVSP TPSIDLFNYFL
Sbjct:  144 TSDVISDMEGIEQTQLMNHGVERGNMMFQGILSPGPASLSPIPSNFFSPPSSDPNMFNNFLHDLSPALHSGRNFMEGGANFLLPSPSNFVSPITPSIDLFNYFL 247          

HSP 2 Score: 72.4034 bits (176), Expect = 6.804e-12
Identity = 49/69 (71.01%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    1 MDQFPYIPSGRSPKRELQGPRPTPLRIHKDSRKINKPPLAPPQLQQQQKQHHQPPRQPIIIYTVSPKIL 69
            M+QFP IP+GRSP+RELQGPRPTPLRIHKDS KI K        QQQQ+Q +Q PRQPIIIYTVSPK++
Sbjct:    1 MNQFPDIPTGRSPRRELQGPRPTPLRIHKDSHKIKK--PPLAPQQQQQQQQYQQPRQPIIIYTVSPKVI 67          
BLAST of Vfaba.Hedin2.R1.2g126920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2SIY5|A0A0B2SIY5_GLYSO (Protein MKS1 OS=Glycine soja OX=3848 GN=glysoja_024462 PE=4 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.170e-46
Identity = 119/247 (48.18%), Postives = 144/247 (58.30%), Query Frame = 0
Query:    1 MDQFPYI-PSGRSPKRELQ--GPRPTPLRIHKDSRKINKPPLAPPQLQQQQKQHHQPPRQPIIIYTVSPKILSI----------------------------------------------LFTVTEQYHP---RRVMPRTSDVVSDMEGIEL-MNHGV-ERGNM-MFQGILSPGPASLSPIPANFFSPPSSDPNMFSNLLQDFSPALLSSRNFMEPGANFFLPSPS---NFVSPQTPSIDLFNYFLD 189
            MDQF +I P+ RSP+RELQ  GPRPTPLRI+KDS KI KPPLAP Q     +   +   QPIIIYTVSPK++                                                  T+ +   P   + V+P   +++SD++GIE+ +  GV ER    MFQGILSPGPASLSPIP+NFFSPPSSDP+M S  L D SP   S RNFME G++F LPSPS   +FVSP TPS+DLFNYFLD
Sbjct:    1 MDQFSHIIPTERSPRRELQLQGPRPTPLRINKDSHKIKKPPLAPQQPSHPHQPPPR---QPIIIYTVSPKVIHTTPSDFMNLVQRLTGSSSSSSVVVPNNNNTHVDPFNNGAGMLSPAARYATIEKAMSPMGKKHVLPSGDNIISDVQGIEINIGDGVLERSQQNMFQGILSPGPASLSPIPSNFFSPPSSDPSMVS-FLHDLSPMFQSGRNFME-GSSFVLPSPSSNFSFVSPHTPSMDLFNYFLD 242          
BLAST of Vfaba.Hedin2.R1.2g126920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445L4F4|A0A445L4F4_GLYSO (Protein MKS1 OS=Glycine soja OX=3848 GN=D0Y65_010657 PE=4 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.881e-45
Identity = 119/247 (48.18%), Postives = 144/247 (58.30%), Query Frame = 0
Query:    1 MDQFPYI-PSGRSPKRELQ--GPRPTPLRIHKDSRKINKPPLAPPQLQQQQKQHHQPPRQPIIIYTVSPKILSI----------------------------------------------LFTVTEQYHP---RRVMPRTSDVVSDMEGIEL-MNHGV-ERGNM-MFQGILSPGPASLSPIPANFFSPPSSDPNMFSNLLQDFSPALLSSRNFMEPGANFFLPSPS---NFVSPQTPSIDLFNYFLD 189
            MDQF +I P+ RSP+RELQ  GPRPTPLRI+KDS KI KPPLAP Q     +   +   QPIIIYTVSPK++                                                  T+ +   P   + V+P   +++SD++GIE+ +  GV ER    MFQGILSPGPASLSPIP+NFFSPPSSDP+M S  L D SP   S RNFME G++F LPSPS   +FVSP TPS+DLFNYFLD
Sbjct:   20 MDQFSHIIPTERSPRRELQLQGPRPTPLRINKDSHKIKKPPLAPQQPSHPHQPPPR---QPIIIYTVSPKVIHTTPSDFMNLVQRLTGSSSSSSVVVPNNNNTHVDPFNNGAGMLSPAARYATIEKAMSPMGKKHVLPSGDNIISDVQGIEINIGDGVLERSQQNMFQGILSPGPASLSPIPSNFFSPPSSDPSMVS-FLHDLSPMFQSGRNFME-GSSFVLPSPSSNFSFVSPHTPSMDLFNYFLD 261          
BLAST of Vfaba.Hedin2.R1.2g126920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7H8C9|A0A1J7H8C9_LUPAN (VQ domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_14080 PE=4 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 7.216e-44
Identity = 109/236 (46.19%), Postives = 133/236 (56.36%), Query Frame = 0
Query:    3 QFPYIPSGRSPKRELQGPRPTPLRIHKDSRKINKPPLAPPQLQQQQKQHHQPPRQPIIIYTVSPKIL---------------------------------------------SILFTVTEQYHP----RRVMPRTSDVVSDMEGIELMNHGVERGNMMFQGILSPGPASLSPIPANFFSPPSSDPNMFSNLLQDFSPALLSSRNFMEPGANFFLPSPSNFVSPQTPSIDLFNYFLD 189
             F  I +GRSP+RELQGPRPTPLRI+KDS KI KPPLAP      ++         IIIYTVSPK++                                             +  +   E+  P    ++V P   D +S + G+E++NHGVERG+M  QGILSPGPASLSPIP++FFSPPS DPNM  N L + SPA   +RN M+    F LPSP+NFVSP TP IDLFNYFLD
Sbjct:    2 DFQDISTGRSPRRELQGPRPTPLRINKDSHKIKKPPLAPAPQPPPRQP--------IIIYTVSPKVIHTTPDDFMNLVQRLTGSSSSSSSSSLSDMTSSNHPFNSGGGMISPAARYATIEKARPPMGKKQVQP-IGDDISHVGGLEMVNHGVERGSMC-QGILSPGPASLSPIPSSFFSPPSLDPNMV-NFLHELSPA-FQNRNVMDQYGGFILPSPTNFVSPYTPPIDLFNYFLD 225          
BLAST of Vfaba.Hedin2.R1.2g126920.1 vs. UniProtKB/TrEMBL
Match: tr|V7B5A9|V7B5A9_PHAVU (VQ domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G159700g PE=4 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 9.548e-43
Identity = 104/237 (43.88%), Postives = 127/237 (53.59%), Query Frame = 0
Query:    7 IPSGRSPKRELQGPRPTPLRIHKDSRKINKPPLAPPQLQQQQKQHHQPPRQPIIIYTVSP----------------------------KIL-------------------------SILFTVTEQYHPRRVM---PRTSDVVSDMEGIELMNHGVERGNMMFQGILSPGPASLSPIPANFFSPPSSDPNMFSNLLQDFSPALLSSRNFMEPGANFFLPSPSNFVSPQTPSIDLFNYF 187
            IPSGRS KR+LQGPRP+PLR++K+S KI KPP+ P   Q        PPRQP+IIYTVSP                            K+L                         +  +   E   P + +   P  S V  D+ G ++++ GV     MF+GILSPGPA LSPIP+NF SPPS+DPNM S   QD SP L S+RNFME    F + SPSNFVSP+TPSIDLFN F
Sbjct:    6 IPSGRSSKRQLQGPRPSPLRVNKESHKIKKPPVVPLPCQLPA-----PPRQPVIIYTVSPKVIHTTPSEFMSLVQRLTGSSSSSSSSNKVLIDPLNDNKDHGGDNNDLSGNLVPSTTAWYAGIEMVRPSQSIKEQPSESRVDVDVGGSDIVSDGVLERPSMFRGILSPGPALLSPIPSNFVSPPSTDPNMVS-FFQDLSPVLHSNRNFME--GTFIMSSPSNFVSPRTPSIDLFNNF 234          
BLAST of Vfaba.Hedin2.R1.2g126920.1 vs. UniProtKB/TrEMBL
Match: tr|I3T6T4|I3T6T4_LOTJA (VQ domain-containing protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.464e-42
Identity = 120/245 (48.98%), Postives = 137/245 (55.92%), Query Frame = 0
Query:    3 QFPY-IPSGRSPKRELQGPRPTPLRIHKDSRKINKPPLAPPQLQQQQKQHHQPPRQPIIIYTVSPKIL-----------------------------------------------SILFTVTEQYHPRRVMPRTSDVVSDMEGI-----ELMNHGV--ERGNMMFQGILSPGPASLSPIPANFFSPP--SSDPNMFSNLLQDFSPALLSSRNFME-PGANFFLPSPSNFVSPQTPSIDLFNYFLD 189
            +FP  IP GRSP+RELQGPRPTPLRI+KDS KI KPPLAP    Q  +   +PPRQPIIIYTVSPK++                                               +  +   E+        + +   +DM  +     +LMNHGV  ER   MFQGILSPGPASLSPIPA+FFSPP  SSDP M S+  QD SPA    RNFME  G  F LPSPSNFVSP T SIDLFNYFLD
Sbjct:    2 EFPADIPMGRSPRRELQGPRPTPLRINKDSHKIKKPPLAP----QASQPPQRPPRQPIIIYTVSPKVIHTTPNDFMNLVQRLTGSTASSSSSSSSFTQVPPANDPFQGNTGMVSPAARYATMEKAMSPMGKKQVTTTDADMSDVGLGGVQLMNHGVVLER-QGMFQGILSPGPASLSPIPASFFSPPAASSDPGMASS-FQDLSPAF--HRNFMEGGGGGFILPSPSNFVSPHTQSIDLFNYFLD 238          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.2g126920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2YDJ0|A0A1S2YDJ0_CICAR4.289e-6457.26protein MKS1 OS=Cicer arietinum OX=3827 GN=LOC1014... [more]
tr|A0A2Z6NUI6|A0A2Z6NUI6_TRISU3.518e-5489.62VQ domain-containing protein OS=Trifolium subterra... [more]
tr|A0A2K3PEA4|A0A2K3PEA4_TRIPR6.040e-5388.57Protein MKS1 OS=Trifolium pratense OX=57577 GN=L19... [more]
tr|A0A396IY47|A0A396IY47_MEDTR3.905e-5286.54VQ domain-containing protein OS=Medicago truncatul... [more]
tr|G7J659|G7J659_MEDTR3.905e-5286.54MKS1-like protein OS=Medicago truncatula OX=3880 G... [more]
tr|A0A0B2SIY5|A0A0B2SIY5_GLYSO7.170e-4648.18Protein MKS1 OS=Glycine soja OX=3848 GN=glysoja_02... [more]
tr|A0A445L4F4|A0A445L4F4_GLYSO1.881e-4548.18Protein MKS1 OS=Glycine soja OX=3848 GN=D0Y65_0106... [more]
tr|A0A1J7H8C9|A0A1J7H8C9_LUPAN7.216e-4446.19VQ domain-containing protein OS=Lupinus angustifol... [more]
tr|V7B5A9|V7B5A9_PHAVU9.548e-4343.88VQ domain-containing protein OS=Phaseolus vulgaris... [more]
tr|I3T6T4|I3T6T4_LOTJA2.464e-4248.98VQ domain-containing protein OS=Lotus japonicus OX... [more]
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BLAST of Vfaba.Hedin2.R1.2g126920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Hedin2.R1.2g126920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..54
IPR039607VQ motif-containing protein 8/17/18/20/21/25PANTHERPTHR33143F16F4.1 PROTEIN-RELATEDcoord: 13..68

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.2g126920.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g126920.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g126920.1; organism=Vicia faba; type=mRNA; length=570bp
ATGGATCAATTCCCTTACATTCCCTCCGGAAGATCACCAAAACGAGAACT
CCAAGGTCCTCGTCCTACACCTCTTAGAATACACAAAGACTCTCGGAAAA
TCAACAAACCACCGTTGGCGCCGCCACAGTTACAACAACAGCAGAAACAG
CATCATCAACCACCGCGTCAACCGATTATAATATACACCGTCTCCCCTAA
GATCCTTTCAATCCTTTTCACGGTGACGGAACAATATCACCCGCGGCGCG
TTATGCCACGTACTAGTGATGTAGTAAGCGACATGGAAGGGATAGAATTG
ATGAACCATGGAGTTGAGAGAGGAAACATGATGTTTCAAGGGATTTTGTC
TCCGGGACCGGCTTCACTATCTCCGATTCCGGCTAACTTTTTCTCGCCAC
CGTCTTCGGATCCGAACATGTTTAGCAACTTACTTCAAGATTTCAGTCCT
GCACTTCTTAGTAGTAGAAATTTTATGGAGCCTGGTGCTAATTTCTTTTT
ACCTAGTCCTTCTAATTTTGTTTCACCTCAAACTCCTTCTATTGATTTAT
TTAACTATTTCTTAGACTAA
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protein sequence of Vfaba.Hedin2.R1.2g126920.1_vfh_v1

>Vfaba.Hedin2.R1.2g126920.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g126920.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g126920.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=189bp
MDQFPYIPSGRSPKRELQGPRPTPLRIHKDSRKINKPPLAPPQLQQQQKQ
HHQPPRQPIIIYTVSPKILSILFTVTEQYHPRRVMPRTSDVVSDMEGIEL
MNHGVERGNMMFQGILSPGPASLSPIPANFFSPPSSDPNMFSNLLQDFSP
ALLSSRNFMEPGANFFLPSPSNFVSPQTPSIDLFNYFLD
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mRNA from alignment at chr2:769933788..769934603-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.2g126920.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g126920.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g126920.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:769933788..769934603- (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR039607VQ_8/17/18/20/21/25