Vfaba.Hedin2.R1.3g079120.1

Transcript Overview
NameVfaba.Hedin2.R1.3g079120.1
Unique NameVfaba.Hedin2.R1.3g079120.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length585
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr3chromosomechr3:492105223..492105900 +Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR275Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR302Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cavfhL207Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL286Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0612Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0773Cajanus cajan Asha genome v1.0Cajanus cajan
crvfhL260Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvfhL381Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvfhL555Pisum sativum Cameor genome v1aPisum sativum
psvfhL583Pisum sativum Cameor genome v1aPisum sativum
vfhvfhR183Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL220Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL238Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR365Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR390Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivfhL244Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL349Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0678Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0823Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1138Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR425Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvuaR325Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR327Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR370Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR402Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL176Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL239Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL159Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL386Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL174Cicer arietinum
carvfhL242Cicer arietinum
ccavfhL235Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL340Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR392Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR450Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR362Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR462Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL528Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL697Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR449Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR462Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL543Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL618Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR338Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR361Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
XM_058914622.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
jg3045.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.3g066600.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g079120Vfaba.Hedin2.R1.3g079120_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g079120.1_vfh_v1-exonVfaba.Hedin2.R1.3g079120.1_vfh_v1-exon-chr3_vfh_v1:492105223..492105542Vicia fabaexon
Vfaba.Hedin2.R1.3g079120.1_vfh_v1-exonVfaba.Hedin2.R1.3g079120.1_vfh_v1-exon-chr3_vfh_v1:492105636..492105900Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g079120.1_vfh_v1-cdsVfaba.Hedin2.R1.3g079120.1_vfh_v1-cds-chr3_vfh_v1:492105223..492105542Vicia fabaCDS
Vfaba.Hedin2.R1.3g079120.1_vfh_v1-cdsVfaba.Hedin2.R1.3g079120.1_vfh_v1-cds-chr3_vfh_v1:492105636..492105900Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g079120.1_vfh_v1Vfaba.Hedin2.R1.3g079120.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.3g079120.1_vfh_v1Vfaba.Hedin2.R1.3g079120.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.3g079120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XWD4|A0A1S2XWD4_CICAR (uncharacterized protein LOC101509595 OS=Cicer arietinum OX=3827 GN=LOC101509595 PE=4 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 8.921e-114
Identity = 170/200 (85.00%), Postives = 176/200 (88.00%), Query Frame = 0
Query:    2 QIKEAISNLPVATEEDDTEEAMSLKDITVTVDEGVQSLATNEENKGVEEADPFGLDALIPESTKKSAK----NDA---IRKEEEEETKRILKLQRKALITCLEIAARRYKTPWCQTVIDILVKHASDKVARFTAHQRDAVEKLWASIREQQTRRRQGKSVNGKLDVNAFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 194
            QIKEAISNLPVAT+EDDTEEAMSL+D  V VDEG Q+L TNE N GVEEADPFGLDALIPESTKK  K    ND    IRKE+EEETKR LKLQRKALI CLEIAARRYKTPWCQTVIDILVKHA D VARFTAHQRDAVEKLWASIREQQ RR+QGKSV GKLDVNAFEWLQQKY+TEKISIRHSVG SGDRRATQWLG
Sbjct:  200 QIKEAISNLPVATKEDDTEEAMSLEDRKVMVDEGGQTLPTNENN-GVEEADPFGLDALIPESTKKGEKYKEKNDPAMTIRKEDEEETKRFLKLQRKALIICLEIAARRYKTPWCQTVIDILVKHAFDNVARFTAHQRDAVEKLWASIREQQMRRKQGKSVTGKLDVNAFEWLQQKYATEKISIRHSVGASGDRRATQWLG 398          
BLAST of Vfaba.Hedin2.R1.3g079120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NXN8|A0A2K3NXN8_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g004301 PE=4 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 1.177e-113
Identity = 168/200 (84.00%), Postives = 178/200 (89.00%), Query Frame = 0
Query:    2 QIKEAISNLPVATEEDDTEEAMSLKDITVTVDEGVQSLATNEENKGVEEADPFGLDALIPESTKKS----AKNDA---IRKEEEEETKRILKLQRKALITCLEIAARRYKTPWCQTVIDILVKHASDKVARFTAHQRDAVEKLWASIREQQTRRRQGKSVNGKLDVNAFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 194
            QIKEAISNLPVATEEDDTEEA+SLKD TV VDEG Q+L  NE+N G EEADPFGLD+L+  STKK     AKND+   +RKE+EEETKR L+LQRKALITCLEIAARRYKTPWCQTVIDILVKHA D VARFTAHQRDAV KLWASI EQQTRR+QGKSVNGKLDVNAFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG
Sbjct:  191 QIKEAISNLPVATEEDDTEEAISLKDSTVMVDEGGQTLPPNEDNNGAEEADPFGLDSLL--STKKGEKFKAKNDSAMKLRKEDEEETKRFLQLQRKALITCLEIAARRYKTPWCQTVIDILVKHAFDNVARFTAHQRDAVGKLWASILEQQTRRKQGKSVNGKLDVNAFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 388          
BLAST of Vfaba.Hedin2.R1.3g079120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LTB3|A0A2Z6LTB3_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_33000 PE=4 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 5.435e-112
Identity = 169/200 (84.50%), Postives = 177/200 (88.50%), Query Frame = 0
Query:    2 QIKEAISNLPVATEEDDTEEAMSLKDITVTVDEGVQSLATNEENKGVEEADPFGLDALIPESTKK----SAKNDA---IRKEEEEETKRILKLQRKALITCLEIAARRYKTPWCQTVIDILVKHASDKVARFTAHQRDAVEKLWASIREQQTRRRQGKSVNGKLDVNAFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 194
            QIKEAISNLPVATEEDDTEEA+SLKD TV VDEG Q+L  NE+N GVEEADPFGLD L+  STKK     AKND+   IRKE+EEETKR L+LQRKALITCLEIAARRYKTPWCQTVIDILVKHA D VARFTAHQRDAV KLWASI EQQTRR+QGKSVNGKLDVNAFEWLQ KYSTEKISIRHSVGGSGDRRATQWLG
Sbjct:  246 QIKEAISNLPVATEEDDTEEAISLKDSTVMVDEGGQTLPPNEDNNGVEEADPFGLDTLL--STKKEEKFKAKNDSAMKIRKEDEEETKRFLQLQRKALITCLEIAARRYKTPWCQTVIDILVKHAFDNVARFTAHQRDAVGKLWASILEQQTRRKQGKSVNGKLDVNAFEWLQTKYSTEKISIRHSVGGSGDRRATQWLG 443          
BLAST of Vfaba.Hedin2.R1.3g079120.1 vs. UniProtKB/TrEMBL
Match: tr|G7I676|G7I676_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11425083 PE=4 SV=2)

HSP 1 Score: 327.02 bits (837), Expect = 4.907e-109
Identity = 168/200 (84.00%), Postives = 175/200 (87.50%), Query Frame = 0
Query:    2 QIKEAISNLPVATEEDDTEEAMSLKDITVTVDEGVQSLATNEENKGVEEADPFGLDALIPESTKKS----AKNDA---IRKEEEEETKRILKLQRKALITCLEIAARRYKTPWCQTVIDILVKHASDKVARFTAHQRDAVEKLWASIREQQTRRRQGKSVNGKLDVNAFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 194
            QIKEAISNLPVATEEDDTEEA+SL D TV  DEG Q+ + NEEN  +EEADPFGLD+LIP STKK      KNDA   IRKEEEEETKR L+LQRKALITCLEIAARRYKTPWCQTVIDILVKHA D VARFTAHQRDAV KLWASI EQQTRR+QGKSVNGKLDVN FEWLQQKYSTEKISIRHSVGGSGDRRATQWLG
Sbjct:  196 QIKEAISNLPVATEEDDTEEAISLNDGTVMADEGGQT-SPNEENNALEEADPFGLDSLIPGSTKKGEKFKGKNDAAMKIRKEEEEETKRFLQLQRKALITCLEIAARRYKTPWCQTVIDILVKHAVDNVARFTAHQRDAVRKLWASILEQQTRRKQGKSVNGKLDVNGFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 394          
BLAST of Vfaba.Hedin2.R1.3g079120.1 vs. UniProtKB/TrEMBL
Match: tr|I3S487|I3S487_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 5.015e-109
Identity = 168/200 (84.00%), Postives = 175/200 (87.50%), Query Frame = 0
Query:    2 QIKEAISNLPVATEEDDTEEAMSLKDITVTVDEGVQSLATNEENKGVEEADPFGLDALIPESTKKS----AKNDA---IRKEEEEETKRILKLQRKALITCLEIAARRYKTPWCQTVIDILVKHASDKVARFTAHQRDAVEKLWASIREQQTRRRQGKSVNGKLDVNAFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 194
            QIKEAISNLPVATEEDDTEEA+SL D TV  DEG Q+ + NEEN  +EEADPFGLD+LIP STKK      KNDA   IRKEEEEETKR L+LQRKALITCLEIAARRYKTPWCQTVIDILVKHA D VARFTAHQRDAV KLWASI EQQTRR+QGKSVNGKLDVN FEWLQQKYSTEKISIRHSVGGSGDRRATQWLG
Sbjct:  196 QIKEAISNLPVATEEDDTEEAISLNDGTVMADEGGQT-SPNEENNALEEADPFGLDSLIPGSTKKGEKFKGKNDAAMKIRKEEEEETKRFLQLQRKALITCLEIAARRYKTPWCQTVIDILVKHAVDNVARFTAHQRDAVRKLWASILEQQTRRKQGKSVNGKLDVNGFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 394          
BLAST of Vfaba.Hedin2.R1.3g079120.1 vs. UniProtKB/TrEMBL
Match: tr|G7I677|G7I677_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11425083 PE=4 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 6.671e-109
Identity = 168/200 (84.00%), Postives = 175/200 (87.50%), Query Frame = 0
Query:    2 QIKEAISNLPVATEEDDTEEAMSLKDITVTVDEGVQSLATNEENKGVEEADPFGLDALIPESTKKS----AKNDA---IRKEEEEETKRILKLQRKALITCLEIAARRYKTPWCQTVIDILVKHASDKVARFTAHQRDAVEKLWASIREQQTRRRQGKSVNGKLDVNAFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 194
            QIKEAISNLPVATEEDDTEEA+SL D TV  DEG Q+ + NEEN  +EEADPFGLD+LIP STKK      KNDA   IRKEEEEETKR L+LQRKALITCLEIAARRYKTPWCQTVIDILVKHA D VARFTAHQRDAV KLWASI EQQTRR+QGKSVNGKLDVN FEWLQQKYSTEKISIRHSVGGSGDRRATQWLG
Sbjct:  194 QIKEAISNLPVATEEDDTEEAISLNDGTVMADEGGQT-SPNEENNALEEADPFGLDSLIPGSTKKGEKFKGKNDAAMKIRKEEEEETKRFLQLQRKALITCLEIAARRYKTPWCQTVIDILVKHAVDNVARFTAHQRDAVRKLWASILEQQTRRKQGKSVNGKLDVNGFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 392          
BLAST of Vfaba.Hedin2.R1.3g079120.1 vs. UniProtKB/TrEMBL
Match: tr|I3SU89|I3SU89_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.857e-108
Identity = 167/200 (83.50%), Postives = 175/200 (87.50%), Query Frame = 0
Query:    2 QIKEAISNLPVATEEDDTEEAMSLKDITVTVDEGVQSLATNEENKGVEEADPFGLDALIPESTKKS----AKNDA---IRKEEEEETKRILKLQRKALITCLEIAARRYKTPWCQTVIDILVKHASDKVARFTAHQRDAVEKLWASIREQQTRRRQGKSVNGKLDVNAFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 194
            QIKEAISNLPVATEEDDTEEA+SL D TV  DEG Q+ + NEEN  +EEADPFGLD+LIP STKK      KNDA   IRKEEEEETKR L+LQRKALITCLEIAARRY+TPWCQTVIDILVKHA D VARFTAHQRDAV KLWASI EQQTRR+QGKSVNGKLDVN FEWLQQKYSTEKISIRHSVGGSGDRRATQWLG
Sbjct:   32 QIKEAISNLPVATEEDDTEEAISLNDGTVMADEGGQT-SPNEENNALEEADPFGLDSLIPGSTKKGEKFKGKNDAAMKIRKEEEEETKRFLQLQRKALITCLEIAARRYRTPWCQTVIDILVKHAVDNVARFTAHQRDAVRKLWASILEQQTRRKQGKSVNGKLDVNGFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 230          
BLAST of Vfaba.Hedin2.R1.3g079120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SPY7|A0A0S3SPY7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G157500 PE=4 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 2.721e-99
Identity = 153/199 (76.88%), Postives = 169/199 (84.92%), Query Frame = 0
Query:    2 QIKEAISNLPVATEEDDTEEAMSLKDITVTVDEGVQSLATNEENKGVEEADPFGLDALIPESTKK----SAKNDAIR--KEEEEETKRILKLQRKALITCLEIAARRYKTPWCQTVIDILVKHASDKVARFTAHQRDAVEKLWASIREQQTRRRQGKSVNGKLDVNAFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 194
            +IKE IS+LPVATE++D EE  SLKD TV  DEG ++ AT+ +N G +EADPFGLDALIP STKK     AKN+A    +E+EEETKR LK QR+ALITCLEIAARRYKTPWCQTVIDILVKHASD V+RFTA QRDAV KLWASIREQQTRR+QGKSVNGKLDVNAFEWLQQKY+ EKISIRHSVG SGDRRA QWLG
Sbjct:  199 KIKEIISSLPVATEQEDAEEEKSLKDGTVIADEGGKTPATDNDNDG-KEADPFGLDALIPNSTKKVEKLKAKNEATVEIREDEEETKRFLKSQREALITCLEIAARRYKTPWCQTVIDILVKHASDNVSRFTASQRDAVGKLWASIREQQTRRKQGKSVNGKLDVNAFEWLQQKYANEKISIRHSVGASGDRRAQQWLG 396          
BLAST of Vfaba.Hedin2.R1.3g079120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9THW3|A0A0L9THW3_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan845s003500 PE=4 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 2.721e-99
Identity = 153/199 (76.88%), Postives = 169/199 (84.92%), Query Frame = 0
Query:    2 QIKEAISNLPVATEEDDTEEAMSLKDITVTVDEGVQSLATNEENKGVEEADPFGLDALIPESTKK----SAKNDAIR--KEEEEETKRILKLQRKALITCLEIAARRYKTPWCQTVIDILVKHASDKVARFTAHQRDAVEKLWASIREQQTRRRQGKSVNGKLDVNAFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 194
            +IKE IS+LPVATE++D EE  SLKD TV  DEG ++ AT+ +N G +EADPFGLDALIP STKK     AKN+A    +E+EEETKR LK QR+ALITCLEIAARRYKTPWCQTVIDILVKHASD V+RFTA QRDAV KLWASIREQQTRR+QGKSVNGKLDVNAFEWLQQKY+ EKISIRHSVG SGDRRA QWLG
Sbjct:  199 KIKEIISSLPVATEQEDAEEEKSLKDGTVIADEGGKTPATDNDNDG-KEADPFGLDALIPNSTKKVEKLKAKNEATVEIREDEEETKRFLKSQREALITCLEIAARRYKTPWCQTVIDILVKHASDNVSRFTASQRDAVGKLWASIREQQTRRKQGKSVNGKLDVNAFEWLQQKYANEKISIRHSVGASGDRRAQQWLG 396          
BLAST of Vfaba.Hedin2.R1.3g079120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371E349|A0A371E349_MUCPR (Uncharacterized protein OS=Mucuna pruriens OX=157652 GN=CR513_61396 PE=4 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 9.304e-99
Identity = 162/200 (81.00%), Postives = 173/200 (86.50%), Query Frame = 0
Query:    2 QIKEAISNLPVATEEDDTEEAMSLKDITVTVDEGVQSLATNEENKGVEEADPFGLDALIPESTKKS----AKNDA---IRKEEEEETKRILKLQRKALITCLEIAARRYKTPWCQTVIDILVKHASDKVARFTAHQRDAVEKLWASIREQQTRRRQGKSVNGKLDVNAFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 194
            QIKEAISNLPVATEE+D EEA SL D TVT DEG Q+ AT+++N G EEADPFGLDALIP STKK     AKN+A   IRKE EEET+R LK QR+ALITCLEIAARRYKTPWCQTVIDILVKHA D VARFT  QRDAV KLWASIREQQTRR+QGKSVNGKLDVNAFEWLQQKY++EKISIRHSVGGSGDRRA QWLG
Sbjct:  199 QIKEAISNLPVATEEEDAEEAKSLIDSTVTADEGGQTPATDKDNDG-EEADPFGLDALIPRSTKKGEKLMAKNEAAVKIRKENEEETERFLKSQREALITCLEIAARRYKTPWCQTVIDILVKHAFDNVARFTTRQRDAVGKLWASIREQQTRRKQGKSVNGKLDVNAFEWLQQKYASEKISIRHSVGGSGDRRAQQWLG 397          
BLAST of Vfaba.Hedin2.R1.3g079120.1 vs. Araport11
Match: AT3G04560.1 (| nucleolar/coiled-body phosphoprotein | Chr3:1227506-1229338 REVERSE LENGTH=417 | 201606)

HSP 1 Score: 233.032 bits (593), Expect = 1.569e-75
Identity = 128/203 (63.05%), Postives = 151/203 (74.38%), Query Frame = 0
Query:    2 QIKEAISNLPVATEEDDTEEAMSLKDITVTVDEG-------VQSLATNEENKGVEEADPFGLDALIPESTKKSAKNDAIRKEEE---EETKRILKLQRKALITCLEIAARRYKTPWCQTVIDILVKHASDKVARFTAHQRDAVEKLWASIREQQTRRRQGKSVNGKLDVNAFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 194
            +IKEAIS+LPV+TEEDD EEA +L++  V  D G       V   A+  +N+ VE +DPFGLDA IP S KK+ K    R  E+   EE KR L+ +R+ALITCLEIAARRYK PWCQTVIDILVKHA + V+RFT+ QR AVEKLWAS+REQ  RR+QGKSV GKLDV AFE LQ KY+ EK+SIR SVG SG+RRA QWLG
Sbjct:  217 RIKEAISDLPVSTEEDDVEEAAALEEAAVK-DNGDGQTTQDVAEAASAGDNEAVE-SDPFGLDAWIPSSGKKNGKTKIKRTNEDPDAEENKRFLRSKREALITCLEIAARRYKVPWCQTVIDILVKHAFENVSRFTSQQRQAVEKLWASVREQHLRRKQGKSVTGKLDVTAFESLQDKYANEKMSIRSSVGASGERRAQQWLG 417          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.3g079120.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2XWD4|A0A1S2XWD4_CICAR8.921e-11485.00uncharacterized protein LOC101509595 OS=Cicer arie... [more]
tr|A0A2K3NXN8|A0A2K3NXN8_TRIPR1.177e-11384.00Uncharacterized protein OS=Trifolium pratense OX=5... [more]
tr|A0A2Z6LTB3|A0A2Z6LTB3_TRISU5.435e-11284.50Uncharacterized protein OS=Trifolium subterraneum ... [more]
tr|G7I676|G7I676_MEDTR4.907e-10984.00Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|I3S487|I3S487_MEDTR5.015e-10984.00Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|G7I677|G7I677_MEDTR6.671e-10984.00Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|I3SU89|I3SU89_MEDTR1.857e-10883.50Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|A0A0S3SPY7|A0A0S3SPY7_PHAAN2.721e-9976.88Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9THW3|A0A0L9THW3_PHAAN2.721e-9976.88Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A371E349|A0A371E349_MUCPR9.304e-9981.00Uncharacterized protein OS=Mucuna pruriens OX=1576... [more]
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BLAST of Vfaba.Hedin2.R1.3g079120.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Hedin2.R1.3g079120.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G04560.11.569e-7563.05| nucleolar/coiled-body phosphoprotein | Chr3:1227... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36749F7O18.3 PROTEINcoord: 2..194

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.3g079120.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g079120.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g079120.1; organism=Vicia faba; type=mRNA; length=585bp
ATGCAAATCAAGGAAGCTATATCTAACCTTCCTGTTGCGACAGAGGAGGA
TGACACAGAAGAAGCAATGTCTCTGAAAGATATTACAGTTACAGTAGATG
AAGGTGTTCAATCGCTTGCCACAAATGAGGAAAATAAAGGTGTGGAGGAA
GCTGACCCATTTGGACTTGATGCCCTGATTCCTGAATCCACAAAGAAAAG
TGCAAAGAATGACGCTATAAGAAAGGAAGAGGAGGAAGAAACTAAACGAA
TCCTTAAGTTACAAAGAAAAGCCCTCATAACCTGTCTAGAGATTGCTGCT
CGGCGGTATAAAACACCTTGGTGCCAAACCGTAATTGATATTTTAGTGAA
GCATGCCTCTGATAAAGTGGCAAGATTTACTGCTCATCAGAGGGATGCTG
TAGAGAAATTGTGGGCTTCCATACGGGAGCAACAGACTCGCAGGAGGCAA
GGAAAGTCAGTTAATGGAAAACTTGATGTAAATGCTTTTGAATGGCTTCA
ACAAAAATATTCTACTGAGAAGATTAGCATTAGGCATTCTGTTGGAGGTA
GTGGAGACCGACGTGCCACACAATGGCTTGGTTAG
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protein sequence of Vfaba.Hedin2.R1.3g079120.1_vfh_v1

>Vfaba.Hedin2.R1.3g079120.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g079120.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g079120.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=194bp
MQIKEAISNLPVATEEDDTEEAMSLKDITVTVDEGVQSLATNEENKGVEE
ADPFGLDALIPESTKKSAKNDAIRKEEEEETKRILKLQRKALITCLEIAA
RRYKTPWCQTVIDILVKHASDKVARFTAHQRDAVEKLWASIREQQTRRRQ
GKSVNGKLDVNAFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG
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mRNA from alignment at chr3:492105223..492105900+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.3g079120.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g079120.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g079120.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:492105223..492105900+ (Vicia faba
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