Vfaba.Hedin2.R1.5g170480.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y8Q7|A0A1S2Y8Q7_CICAR (uncharacterized protein LOC101512540 OS=Cicer arietinum OX=3827 GN=LOC101512540 PE=4 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.901e-36 Identity = 71/98 (72.45%), Postives = 83/98 (84.69%), Query Frame = 0 Query: 1 MAPSKLFVFALSVALIFVIGTFKADVSSDGSNSSSLKVQLDQLNTKIQFLDSQISEKSQELKKKDGIIAEQEKLFNDRSSVIQSLHNTVASLQACLSL 98
MAPSK F+F LSVALIF + T +ADVS + +SS+LK+QLDQLN+KIQFL+SQISEKSQ+LKKKD IIAE+EKLFND+SS IQSL N VASLQ SL
Sbjct: 1 MAPSKFFIFVLSVALIFFLVTSEADVSIEQPDSSALKIQLDQLNSKIQFLESQISEKSQDLKKKDEIIAEKEKLFNDKSSAIQSLQNEVASLQKKGSL 98
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. UniProtKB/TrEMBL
Match: tr|B7FKW9|B7FKW9_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.960e-33 Identity = 69/98 (70.41%), Postives = 81/98 (82.65%), Query Frame = 0 Query: 1 MAPSKLFVFALSVALIFVIGTFKADVSSDGSNSSSLKVQLDQLNTKIQFLDSQISEKSQELKKKDGIIAEQEKLFNDRSSVIQSLHNTVASLQACLSL 98
MAP KLFVFA+SVALIF T +ADVS + S+SS+LK+QLDQLN+KIQ L+SQISEK+QELKKKD +IAE+EKLF D+ S IQSL N VASLQ SL
Sbjct: 1 MAPPKLFVFAISVALIFSFVTSEADVSIEDSDSSALKIQLDQLNSKIQSLESQISEKTQELKKKDQVIAEKEKLFQDKLSSIQSLQNEVASLQKKGSL 98
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072V3N0|A0A072V3N0_MEDTR (Myosin heavy chain-like protein OS=Medicago truncatula OX=3880 GN=11437083 PE=4 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 4.891e-33 Identity = 69/98 (70.41%), Postives = 81/98 (82.65%), Query Frame = 0 Query: 1 MAPSKLFVFALSVALIFVIGTFKADVSSDGSNSSSLKVQLDQLNTKIQFLDSQISEKSQELKKKDGIIAEQEKLFNDRSSVIQSLHNTVASLQACLSL 98
MAP KLFVFA+SVALIF T +ADVS + S+SS+LK+QLDQLN+KIQ L+SQISEK+QELKKKD +IAE+EKLF D+ S IQSL N VASLQ SL
Sbjct: 1 MAPPKLFVFAISVALIFSFVTSEADVSIEDSDSSALKIQLDQLNSKIQSLESQISEKTQELKKKDQVIAEKEKLFQDKLSSIQSLQNEVASLQKKGSL 98
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. UniProtKB/TrEMBL
Match: tr|G7J2W4|G7J2W4_MEDTR (Myosin heavy chain-like protein OS=Medicago truncatula OX=3880 GN=11437083 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 5.944e-33 Identity = 69/98 (70.41%), Postives = 81/98 (82.65%), Query Frame = 0 Query: 1 MAPSKLFVFALSVALIFVIGTFKADVSSDGSNSSSLKVQLDQLNTKIQFLDSQISEKSQELKKKDGIIAEQEKLFNDRSSVIQSLHNTVASLQACLSL 98
MAP KLFVFA+SVALIF T +ADVS + S+SS+LK+QLDQLN+KIQ L+SQISEK+QELKKKD +IAE+EKLF D+ S IQSL N VASLQ SL
Sbjct: 1 MAPPKLFVFAISVALIFSFVTSEADVSIEDSDSSALKIQLDQLNSKIQSLESQISEKTQELKKKDQVIAEKEKLFQDKLSSIQSLQNEVASLQKKGSL 98
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LHY1|A0A2Z6LHY1_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_307200 PE=4 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.025e-30 Identity = 66/93 (70.97%), Postives = 74/93 (79.57%), Query Frame = 0 Query: 1 MAPSKLFVFALSVALIFVIGTFKADVSSDGSNSSSLKVQLDQLNTKIQFLDSQISEKSQELKKKDGIIAEQEKLFNDRSSVIQSLHNTVASLQ 93
MAPSKLF FALSVAL F I T +ADVS S+SSSLK+QLDQLN+KIQ L+SQISEKS ELKKKD IAE+EK+ D+ S IQSL N V SLQ
Sbjct: 1 MAPSKLFFFALSVALFFFIVTSEADVSIQDSDSSSLKIQLDQLNSKIQILESQISEKSNELKKKDETIAEKEKVLQDKLSSIQSLQNEVDSLQ 93
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PGW2|A0A2K3PGW2_TRIPR (Myosin heavy chain-related protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g011205 PE=4 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.881e-29 Identity = 67/98 (68.37%), Postives = 76/98 (77.55%), Query Frame = 0 Query: 1 MAPSKLFVFALSVALIFVIGTFKADVSSDGSNSSSLKVQLDQLNTKIQFLDSQISEKSQELKKKDGIIAEQEKLFNDRSSVIQSLHNTVASLQACLSL 98
MAPSKLF FALSVAL F I T + DVS S+SSSLK+QLDQLN+KIQ L+SQIS+KSQELKKKD IAE+EKL D+ S IQSL + V SLQ SL
Sbjct: 1 MAPSKLFFFALSVALFFFIVTSEPDVSIADSDSSSLKIQLDQLNSKIQSLESQISDKSQELKKKDETIAEKEKLLQDKLSSIQSLQSEVDSLQKKGSL 98
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. UniProtKB/TrEMBL
Match: tr|C6TI54|C6TI54_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.842e-25 Identity = 62/104 (59.62%), Postives = 79/104 (75.96%), Query Frame = 0 Query: 1 MAPSKLFVFALSVALIFVIGTFKADVSSDGS----NSSSLKVQLDQLNTKIQFLDSQISEKSQELKKKDGIIAEQEKLFNDRSSVIQSLHNTVASLQACLSLTS 100
MAP KLFVFALSV LIF I +AD+S +GS ++S++++QLDQLN+KIQ L+SQISEK +E+KKKD IIAE+EK D+S IQSL N +ASLQ SL +
Sbjct: 1 MAPPKLFVFALSVTLIFAIVGAEADISIEGSTPEPDTSAIRIQLDQLNSKIQILESQISEKLEEVKKKDEIIAEKEKSIEDKSITIQSLQNEIASLQKKGSLDA 104
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. UniProtKB/TrEMBL
Match: tr|I1K974|I1K974_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_06G080100 PE=4 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.019e-25 Identity = 62/104 (59.62%), Postives = 79/104 (75.96%), Query Frame = 0 Query: 1 MAPSKLFVFALSVALIFVIGTFKADVSSDGS----NSSSLKVQLDQLNTKIQFLDSQISEKSQELKKKDGIIAEQEKLFNDRSSVIQSLHNTVASLQACLSLTS 100
MAP KLFVFALSV LIF I +AD+S +GS ++S++++QLDQLN+KIQ L+SQISEK +E+KKKD IIAE+EK D+S IQSL N +ASLQ SL +
Sbjct: 1 MAPPKLFVFALSVTLIFAIVGAEADISIEGSTPEPDTSAIRIQLDQLNSKIQILESQISEKLEEVKKKDEIIAEKEKSIEDKSITIQSLQNEIASLQKKGSLDA 104
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QEN2|A0A0B2QEN2_GLYSO (Laminin subunit beta-1 OS=Glycine soja OX=3848 GN=D0Y65_014068 PE=4 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.019e-25 Identity = 62/104 (59.62%), Postives = 79/104 (75.96%), Query Frame = 0 Query: 1 MAPSKLFVFALSVALIFVIGTFKADVSSDGS----NSSSLKVQLDQLNTKIQFLDSQISEKSQELKKKDGIIAEQEKLFNDRSSVIQSLHNTVASLQACLSLTS 100
MAP KLFVFALSV LIF I +AD+S +GS ++S++++QLDQLN+KIQ L+SQISEK +E+KKKD IIAE+EK D+S IQSL N +ASLQ SL +
Sbjct: 1 MAPPKLFVFALSVTLIFAIVGAEADISIEGSTPEPDTSAIRIQLDQLNSKIQILESQISEKLEEVKKKDEIIAEKEKSIEDKSITIQSLQNEIASLQKKGSLDA 104
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TEV0|A0A0L9TEV0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan561s007400 PE=4 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.845e-25 Identity = 58/102 (56.86%), Postives = 76/102 (74.51%), Query Frame = 0 Query: 1 MAPSKLFVFALSVALIFVIGTFKADVSSDGS----NSSSLKVQLDQLNTKIQFLDSQISEKSQELKKKDGIIAEQEKLFNDRSSVIQSLHNTVASLQACLSL 98
MAP+KLF FA SVALIF I +ADVS +GS +SS+ K+QLDQLN+KI+ L+S+I EKS+E+K+KD I+A +EK+ D+ IQSL N +ASLQ SL
Sbjct: 1 MAPTKLFFFAFSVALIFAIVGAEADVSVEGSVAEPDSSAFKIQLDQLNSKIRILESEIREKSEEVKRKDEIVAGKEKIIQDKLVTIQSLQNDIASLQKKGSL 102
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. Araport11
Match: AT4G31340.1 (| myosin heavy chain-like protein | Chr4:15205662-15208950 FORWARD LENGTH=437 | 201606) HSP 1 Score: 64.6994 bits (156), Expect = 5.762e-13 Identity = 33/69 (47.83%), Postives = 47/69 (68.12%), Query Frame = 0 Query: 25 DVSSDGSNSSSLKVQLDQLNTKIQFLDSQISEKSQELKKKDGIIAEQEKLFNDRSSVIQSLHNTVASLQ 93
+VS + S K+ LDQLN KI+ L+SQI EK++E++ KD ++AE+EKL +R I SL V+SLQ
Sbjct: 28 EVSEAAGSDGSSKIHLDQLNAKIRALESQIDEKTREVQGKDEVVAEKEKLLKEREDKIASLQTEVSSLQ 96
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. Araport11
Match: AT4G31340.2 (| myosin heavy chain-like protein | Chr4:15205662-15208895 FORWARD LENGTH=420 | 201606) HSP 1 Score: 64.3142 bits (155), Expect = 8.386e-13 Identity = 33/69 (47.83%), Postives = 47/69 (68.12%), Query Frame = 0 Query: 25 DVSSDGSNSSSLKVQLDQLNTKIQFLDSQISEKSQELKKKDGIIAEQEKLFNDRSSVIQSLHNTVASLQ 93
+VS + S K+ LDQLN KI+ L+SQI EK++E++ KD ++AE+EKL +R I SL V+SLQ
Sbjct: 28 EVSEAAGSDGSSKIHLDQLNAKIRALESQIDEKTREVQGKDEVVAEKEKLLKEREDKIASLQTEVSSLQ 96
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. Araport11
Match: AT2G24420.2 (| DNA repair ATPase-like protein | Chr2:10380147-10382624 FORWARD LENGTH=440 | 201606) HSP 1 Score: 57.7658 bits (138), Expect = 1.429e-10 Identity = 30/75 (40.00%), Postives = 48/75 (64.00%), Query Frame = 0 Query: 24 ADVSSDGSNSSSLK-----VQLDQLNTKIQFLDSQISEKSQELKKKDGIIAEQEKLFNDRSSVIQSLHNTVASLQ 93
AD DG + L+ ++LDQLN KI+ L+SQI +K++ELK ++ ++ E+EKL +R + SL V+SL+
Sbjct: 25 ADAGIDGGDEPKLRSDGGDIELDQLNAKIRALESQIDDKTKELKGREELVTEKEKLLQERQDKVASLETEVSSLR 99
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. Araport11
Match: AT2G24420.1 (| DNA repair ATPase-like protein | Chr2:10380147-10382624 FORWARD LENGTH=440 | 201606) HSP 1 Score: 57.7658 bits (138), Expect = 1.429e-10 Identity = 30/75 (40.00%), Postives = 48/75 (64.00%), Query Frame = 0 Query: 24 ADVSSDGSNSSSLK-----VQLDQLNTKIQFLDSQISEKSQELKKKDGIIAEQEKLFNDRSSVIQSLHNTVASLQ 93
AD DG + L+ ++LDQLN KI+ L+SQI +K++ELK ++ ++ E+EKL +R + SL V+SL+
Sbjct: 25 ADAGIDGGDEPKLRSDGGDIELDQLNAKIRALESQIDDKTKELKGREELVTEKEKLLQERQDKVASLETEVSSLR 99 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.5g170480.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 4 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.5g170480.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g170480.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g170480.1; organism=Vicia faba; type=mRNA; length=396bpback to top protein sequence of Vfaba.Hedin2.R1.5g170480.1_vfh_v1 >Vfaba.Hedin2.R1.5g170480.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g170480.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g170480.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=131bpback to top mRNA from alignment at chr5:1183240024..1183241929- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.5g170480.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g170480.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g170480.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:1183240024..1183241929- (Vicia fababack to top |