Vfaba.Hedin2.R1.5g181040.1
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3KR12|A0A2K3KR12_TRIPR (Putative copia-type protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g056324 PE=4 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 5.089e-57 Identity = 87/134 (64.93%), Postives = 106/134 (79.10%), Query Frame = 0 Query: 1 MLAGNNFAEISFVKAFLHDSFKIKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPIYKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
+LAG++ AEI VK FL F+IKDLG LR+FLG+E+ RS GIL+NQRKYTL+LL +SG LA KP TPYD SLKL+ DSP+Y DE+ ++RLIGRLLYLTTTRPDI+F VQQLSQ VS+ Q +HF+ RVL
Sbjct: 66 VLAGDDLAEIQHVKTFLDHQFRIKDLGKLRFFLGLEIARSPSGILLNQRKYTLDLLSDSGHLAVKPCSTPYDSSLKLHDADSPLYHDESAFRRLIGRLLYLTTTRPDIAFAVQQLSQFVSRPQNIHFQAATRVL 199
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MSB5|A0A2K3MSB5_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Trifolium pratense OX=57577 GN=L195_g016769 PE=4 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 2.093e-52 Identity = 90/134 (67.16%), Postives = 109/134 (81.34%), Query Frame = 0 Query: 1 MLAGNNFAEISFVKAFLHDSFKIKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPIYKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
+LAGNN EI+ VK+FL F+IKDLGNLR+F+G+E+ RS KGIL+NQRKYTLELL++SG LA KPS TPYDPSLKL+ +SP Y D + Y+RLIGRLLYLTTTRPDI+F VQQLSQ VS + VHF+ +VL
Sbjct: 1111 VLAGNNSLEITSVKSFLDKRFQIKDLGNLRFFVGLEIARSKKGILLNQRKYTLELLQDSGNLAAKPSSTPYDPSLKLHDSESPPYNDPSGYRRLIGRLLYLTTTRPDITFAVQQLSQFVSSPREVHFQAATKVL 1244
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151TFA8|A0A151TFA8_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_011996 PE=4 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 3.546e-52 Identity = 90/134 (67.16%), Postives = 108/134 (80.60%), Query Frame = 0 Query: 1 MLAGNNFAEISFVKAFLHDSFKIKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPIYKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
+LAGN+ EI F+KA LH FKIKDLGNLRYFLG+E+ RS+KGIL+NQRKYTLE+LE+ G LA KPS TP++PSLKL+ Y DET Y+RLIGRLLYLTTTRPDIS+VVQQLSQ VSK +H++ R+L
Sbjct: 695 ILAGNDKPEIDFIKAQLHKCFKIKDLGNLRYFLGLEIARSNKGILLNQRKYTLEILEDVGFLAAKPSSTPFNPSLKLHSDHGSPYNDETAYRRLIGRLLYLTTTRPDISYVVQQLSQFVSKPLDIHYQAATRIL 828
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151QWB5|A0A151QWB5_CAJCA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_044482 PE=4 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 6.662e-48 Identity = 77/134 (57.46%), Postives = 102/134 (76.12%), Query Frame = 0 Query: 1 MLAGNNFAEISFVKAFLHDSFKIKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPIYKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
+L+GNNF+EI VK LH F+IKDLG L++FLG+EV RS KGI++NQRKY LEL++ESG L +KP+ TP DP++KL+ + D T ++RLIGRLLYLT TRPDISF VQQLSQ VS+ + H + +R++
Sbjct: 9 VLSGNNFSEIQIVKQHLHQKFQIKDLGPLKFFLGLEVARSKKGIILNQRKYCLELIDESGLLGSKPAPTPADPAIKLHADHGSLLNDPTSFRRLIGRLLYLTNTRPDISFSVQQLSQFVSQPREPHLQAALRIV 142
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3JQF8|A0A2K3JQF8_TRIPR (Putative copia-type protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g058127 PE=4 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.998e-46 Identity = 74/134 (55.22%), Postives = 98/134 (73.13%), Query Frame = 0 Query: 1 MLAGNNFAEISFVKAFLHDSFKIKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPIYKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
+LAG++ E + +K L D FKIKDLG L+YFLGIEV S++GI + QRKY L+LL+++G L KP+KTP DPS+KL+ SP Y D Y+RL+G+LLYLTTTRPDI+FV QQLSQ ++ VH+ RV+
Sbjct: 30 ILAGDSLDEFTHIKQLLDDLFKIKDLGQLKYFLGIEVAHSNQGITLCQRKYCLDLLQDTGLLGAKPAKTPLDPSVKLHQDTSPPYADIASYRRLVGKLLYLTTTRPDIAFVTQQLSQFLTSPTQVHYDTACRVI 163
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3L8G7|A0A2K3L8G7_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Trifolium pratense OX=57577 GN=L195_g030756 PE=4 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.585e-46 Identity = 82/134 (61.19%), Postives = 99/134 (73.88%), Query Frame = 0 Query: 1 MLAGNNFAEISFVKAFLHDSFKIKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPIYKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
+LAGN+ EI VK FL FKIKDLG LRYFLG E+ RS KGI +NQRKY LELL+++G LATKPSK P++P+ KL+ D + +D + Y+RLIGRLLYLT TRPDISF VQ LSQ VSK V H+ R+L
Sbjct: 300 ILAGNSSQEIQDVKHFLDQKFKIKDLGKLRYFLGFEIARSPKGIFVNQRKYALELLQDTGFLATKPSKIPFNPTTKLSSTDGALLEDPSSYRRLIGRLLYLTNTRPDISFSVQHLSQFVSKPLVPHYTAATRIL 433
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3L6W5|A0A2K3L6W5_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Trifolium pratense OX=57577 GN=L195_g030193 PE=4 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.848e-45 Identity = 82/134 (61.19%), Postives = 98/134 (73.13%), Query Frame = 0 Query: 1 MLAGNNFAEISFVKAFLHDSFKIKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPIYKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
+LAGN+ EI VK FL FKIKDLG LRYFLG E+ RS KGI +NQRKYTLELL+++G LATKPS P++P+ KL+ D KD + Y+RLIGRLLYLT TRPDISF VQ LSQ VSK + H+ R+L
Sbjct: 450 VLAGNSSKEIQAVKHFLDQKFKIKDLGKLRYFLGFEIARSPKGIFVNQRKYTLELLQDTGFLATKPSNIPFNPTTKLSSTDGAPLKDPSSYRRLIGRLLYLTNTRPDISFSVQHLSQFVSKPLIPHYTAATRIL 583
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q7YDX6|A0A3Q7YDX6_CICAR (uncharacterized protein LOC113785815 OS=Cicer arietinum OX=3827 GN=LOC113785815 PE=4 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.881e-45 Identity = 76/112 (67.86%), Postives = 87/112 (77.68%), Query Frame = 0 Query: 23 IKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPIYKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
IKDLG+LRYFLGIEV RS GIL++ RKYTL+LL + G LATKP TPYD SL LN DSP+Y+DE+Q RLIGRLLYLTTTR DI+F VQQLSQHVS + VHFK +
Sbjct: 7 IKDLGSLRYFLGIEVARSPSGILLDHRKYTLKLLNDIGILATKPPSTPYDSSLNLNYSDSPLYEDESQLMRLIGRLLYLTTTRLDIAFTVQQLSQHVSSPRQVHFKAAASIF 118
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A392NRH6|A0A392NRH6_9FABA (LTR retrotransposon-like protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.441e-45 Identity = 73/126 (57.94%), Postives = 93/126 (73.81%), Query Frame = 0 Query: 9 EISFVKAFLHDSFKIKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPIYKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
EI VK FL F+IKDLG+LR+FLG+E+ RSS GI +NQRKY LELLE++G L +KP+ P+DP +KL+ D + D + Y+RLIGRLLYLT TRPDISF VQ LSQ+VS V H++ R+L
Sbjct: 5 EIKSVKLFLDQQFRIKDLGHLRFFLGLEIARSSSGIFLNQRKYALELLEDTGFLGSKPAAVPFDPHIKLSATDGIPFDDPSAYRRLIGRLLYLTHTRPDISFSVQHLSQYVSNPLVPHYQAATRIL 130
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151RAD3|A0A151RAD3_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_039187 PE=4 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.096e-44 Identity = 77/134 (57.46%), Postives = 102/134 (76.12%), Query Frame = 0 Query: 1 MLAGNNFAEISFVKAFLHDSFKIKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPIYKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
+L+GNNF+EI VK LH F+IKDLG L++FLG+EV RS KGI++NQRKY LEL++ESG L +KP+ TP DP++KL+ + D T ++RLIGRLLYLT TRPDISF VQQLSQ VS+ + H + +R++
Sbjct: 1133 VLSGNNFSEIQIVKQHLHQKFQIKDLGPLKFFLGLEVARSKKGIILNQRKYCLELIDESGLLGSKPAPTPADPAIKLHADHGSLLNDPTSFRRLIGRLLYLTNTRPDISFSVQQLSQFVSQPREPHLQAALRIV 1266
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9ZT94|POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.491e-21 Identity = 49/134 (36.57%), Postives = 74/134 (55.22%), Query Frame = 0 Query: 1 MLAGNNFAEISFVKAFLHDSFKIKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPIYKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
++ GN+ + L F +K+ +L YFLGIE R +G+ ++QR+YTL+LL + L KP TP S KL D T+Y+ ++G L YL TRPD+S+ V +LSQ++ H+ + RVL
Sbjct: 1138 LITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVL 1271
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q94HW2|POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.965e-21 Identity = 49/134 (36.57%), Postives = 72/134 (53.73%), Query Frame = 0 Query: 1 MLAGNNFAEISFVKAFLHDSFKIKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPIYKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
++ GN+ + L F +KD L YFLGIE R G+ ++QR+Y L+LL + + KP TP PS KL+ D T+Y+ ++G L YL TRPDIS+ V +LSQ + H + + R+L
Sbjct: 1155 LITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRIL 1288
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/Swiss-Prot
Match: sp|P92519|M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.962e-20 Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 0 Query: 1 MLAGNNFAEISFVKAFLHDSFKIKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPI-YKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
+L G++ ++ + L +F +KDLG + YFLGI++ G+ ++Q KY ++L +G L KP TP LKLN S Y D + ++ ++G L YLT TRPDIS+ V + Q + + + F ++ RVL
Sbjct: 11 LLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPL--PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVL 143
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/Swiss-Prot
Match: sp|P25600|YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2) HSP 1 Score: 62.003 bits (149), Expect = 4.510e-11 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 0 Query: 13 VKAFLHDSFKIKDLGNLRYFLGIEVVRSSKG-ILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPIYKDETQYKRLIGRLLYLTTT-RPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
VK L + +KDLG + FLG+ + +SS G I ++ + Y + ES K ++TP S L SP KD T Y+ ++G+LL+ T RPDIS+ V LS+ + + + +H + RVL
Sbjct: 104 VKQELTKLYSMKDLGKVDKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVL 227
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/Swiss-Prot
Match: sp|P10978|POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 5.351e-11 Identity = 44/143 (30.77%), Postives = 72/143 (50.35%), Query Frame = 0 Query: 1 MLAGNNFAEISFVKAFLHDSFKIKDLGNLRYFLGIEVV--RSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLN---CPDSPIYKDETQ---YKRLIGRLLY-LTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
++ G + I+ +K L SF +KDLG + LG+++V R+S+ + ++Q KY +LE KP TP LKL+ CP + K Y +G L+Y + TRPDI+ V +S+ + H++ V +L
Sbjct: 1013 LIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWIL 1155
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. Araport11
Match: AT4G23160.3 (| cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606) HSP 1 Score: 126.716 bits (317), Expect = 1.683e-34 Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 0 Query: 1 MLAGNNFAEISFVKAFLHDSFKIKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPIYKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
++ NN A + +K+ L FK++DLG L+YFLG+E+ RS+ GI I QRKY L+LL+E+G L KPS P DPS+ + + D Y+RLIGRL+YL TR DISF V +LSQ ++ H + V+++L
Sbjct: 288 IICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKIL 421
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. Araport11
Match: AT4G23160.2 (| cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606) HSP 1 Score: 126.716 bits (317), Expect = 1.683e-34 Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 0 Query: 1 MLAGNNFAEISFVKAFLHDSFKIKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPIYKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
++ NN A + +K+ L FK++DLG L+YFLG+E+ RS+ GI I QRKY L+LL+E+G L KPS P DPS+ + + D Y+RLIGRL+YL TR DISF V +LSQ ++ H + V+++L
Sbjct: 288 IICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKIL 421
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. Araport11
Match: ATMG00810.1 (| DNA/RNA polymerases superfamily protein | ChrM:227709-228431 REVERSE LENGTH=240 | 201606) HSP 1 Score: 85.8853 bits (211), Expect = 3.030e-21 Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 0 Query: 1 MLAGNNFAEISFVKAFLHDSFKIKDLGNLRYFLGIEVVRSSKGILINQRKYTLELLEESGQLATKPSKTPYDPSLKLNCPDSPI-YKDETQYKRLIGRLLYLTTTRPDISFVVQQLSQHVSKSQVVHFKVVIRVL 134
+L G++ ++ + L +F +KDLG + YFLGI++ G+ ++Q KY ++L +G L KP TP LKLN S Y D + ++ ++G L YLT TRPDIS+ V + Q + + + F ++ RVL
Sbjct: 11 LLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPL--PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVL 143 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.5g181040.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.5g181040.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g181040.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g181040.1; organism=Vicia faba; type=mRNA; length=405bpback to top protein sequence of Vfaba.Hedin2.R1.5g181040.1_vfh_v1 >Vfaba.Hedin2.R1.5g181040.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g181040.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g181040.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=134bpback to top mRNA from alignment at chr5:1252965455..1252965859- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.5g181040.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g181040.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g181040.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:1252965455..1252965859- (Vicia fababack to top |