Vfaba.Tiffany.R1.1g103480.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.1g103480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NVH5|A0A2K3NVH5_TRIPR (LINES_C domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g003496 PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 5.531e-14 Identity = 35/51 (68.63%), Postives = 45/51 (88.24%), Query Frame = 0 Query: 102 LARKVNLLAVENQFVQHVAVNAVVLISKFMFTSGKNWDEFVHLLCCSLEMA 152 L + VNLL V+++FVQHVAVNA+VLIS+F+FT+G NWD+F+H LC SLEMA Sbjct: 96 LTKLVNLLTVKSEFVQHVAVNALVLISEFVFTTGNNWDDFIHFLCVSLEMA 146
BLAST of Vfaba.Tiffany.R1.1g103480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3ECX6|A0A1S3ECX6_CICAR (uncharacterized protein LOC101515375 OS=Cicer arietinum OX=3827 GN=LOC101515375 PE=4 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.990e-13 Identity = 34/51 (66.67%), Postives = 43/51 (84.31%), Query Frame = 0 Query: 102 LARKVNLLAVENQFVQHVAVNAVVLISKFMFTSGKNWDEFVHLLCCSLEMA 152 + + V LL +++FVQHVAVNA+VL SKF+ T+G NWDEF+HLLCCSLEMA Sbjct: 82 VTKMVILLTFKSEFVQHVAVNALVLTSKFVSTTGNNWDEFIHLLCCSLEMA 132
BLAST of Vfaba.Tiffany.R1.1g103480.1 vs. UniProtKB/TrEMBL
Match: tr|K7K6S1|K7K6S1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100812484 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.352e-12 Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 0 Query: 108 LLAVENQFVQHVAVNAVVLISKFMFTSGKNWDEFVHLLCCSLEMA 152 LL V+++FVQHV VNA+VL+SKF++T G NWD F+HLLCCSLEMA Sbjct: 94 LLTVKSEFVQHVVVNALVLVSKFLYTMGNNWDGFIHLLCCSLEMA 138
BLAST of Vfaba.Tiffany.R1.1g103480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0KTB3|A0A0R0KTB3_SOYBN (LINES_N domain-containing protein OS=Glycine max OX=3847 GN=100812484 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.416e-12 Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 0 Query: 108 LLAVENQFVQHVAVNAVVLISKFMFTSGKNWDEFVHLLCCSLEMA 152 LL V+++FVQHV VNA+VL+SKF++T G NWD F+HLLCCSLEMA Sbjct: 94 LLTVKSEFVQHVVVNALVLVSKFLYTMGNNWDGFIHLLCCSLEMA 138
BLAST of Vfaba.Tiffany.R1.1g103480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LKK8|A0A445LKK8_GLYSO (LINES_N domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_003132 PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.746e-12 Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 0 Query: 108 LLAVENQFVQHVAVNAVVLISKFMFTSGKNWDEFVHLLCCSLEMA 152 LL V+++FVQHV VNA+VL+SKF++T G NWD F+HLLCCSLEMA Sbjct: 94 LLTVKSEFVQHVVVNALVLVSKFVYTMGNNWDGFIHLLCCSLEMA 138
BLAST of Vfaba.Tiffany.R1.1g103480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LK88|A0A445LK88_GLYSO (LINES_C domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_003132 PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.762e-12 Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 0 Query: 108 LLAVENQFVQHVAVNAVVLISKFMFTSGKNWDEFVHLLCCSLEMA 152 LL V+++FVQHV VNA+VL+SKF++T G NWD F+HLLCCSLEMA Sbjct: 94 LLTVKSEFVQHVVVNALVLVSKFVYTMGNNWDGFIHLLCCSLEMA 138
BLAST of Vfaba.Tiffany.R1.1g103480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LK90|A0A445LK90_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_003132 PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.914e-12 Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 0 Query: 108 LLAVENQFVQHVAVNAVVLISKFMFTSGKNWDEFVHLLCCSLEMA 152 LL V+++FVQHV VNA+VL+SKF++T G NWD F+HLLCCSLEMA Sbjct: 94 LLTVKSEFVQHVVVNALVLVSKFVYTMGNNWDGFIHLLCCSLEMA 138
BLAST of Vfaba.Tiffany.R1.1g103480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LKC1|A0A445LKC1_GLYSO (LINES_N domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_003132 PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.996e-12 Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 0 Query: 108 LLAVENQFVQHVAVNAVVLISKFMFTSGKNWDEFVHLLCCSLEMA 152 LL V+++FVQHV VNA+VL+SKF++T G NWD F+HLLCCSLEMA Sbjct: 94 LLTVKSEFVQHVVVNALVLVSKFVYTMGNNWDGFIHLLCCSLEMA 138
BLAST of Vfaba.Tiffany.R1.1g103480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LK87|A0A445LK87_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_003132 PE=4 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.247e-12 Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 0 Query: 108 LLAVENQFVQHVAVNAVVLISKFMFTSGKNWDEFVHLLCCSLEMA 152 LL V+++FVQHV VNA+VL+SKF++T G NWD F+HLLCCSLEMA Sbjct: 3 LLTVKSEFVQHVVVNALVLVSKFVYTMGNNWDGFIHLLCCSLEMA 47
BLAST of Vfaba.Tiffany.R1.1g103480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072TUH7|A0A072TUH7_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=25501673 PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.731e-12 Identity = 32/51 (62.75%), Postives = 43/51 (84.31%), Query Frame = 0 Query: 102 LARKVNLLAVENQFVQHVAVNAVVLISKFMFTSGKNWDEFVHLLCCSLEMA 152 + + VNLL V+++FVQHVAVNA+VL S+F+ T+G +W EF+HLLCCSLE A Sbjct: 79 VTKMVNLLTVKSEFVQHVAVNALVLTSEFLSTTGNSWAEFIHLLCCSLETA 129 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.1g103480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.1g103480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Tiffany.R1.1g103480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 0
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.1g103480.1_tif_v1 ID=Vfaba.Tiffany.R1.1g103480.1_tif_v1; Name=Vfaba.Tiffany.R1.1g103480.1; organism=Vicia faba; type=mRNA; length=459bpback to top protein sequence of Vfaba.Tiffany.R1.1g103480.1_tif_v1 >Vfaba.Tiffany.R1.1g103480.1_tif_v1 ID=Vfaba.Tiffany.R1.1g103480.1_tif_v1; Name=Vfaba.Tiffany.R1.1g103480.1_tif_v1; organism=Vicia faba; type=polypeptide; length=152bpback to top mRNA from alignment at chr1S:900839909..900840939- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.1g103480.1_tif_v1 ID=Vfaba.Tiffany.R1.1g103480.1_tif_v1; Name=Vfaba.Tiffany.R1.1g103480.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:900839909..900840939- (Vicia fababack to top |