Vfaba.Tiffany.R1.1g301920.1

Transcript Overview
NameVfaba.Tiffany.R1.1g301920.1
Unique NameVfaba.Tiffany.R1.1g301920.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length699
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr1Lchromosomechr1L:1130207656..1130208493 -Vicia faba cv. Tiffany genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
tifzwsR010Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifzwsR045Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
astifL000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
astifL550Vigna angularis Jingnong 6 genome v1.1Vigna angularis
astifL700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
astifL753Vigna angularis Jingnong 6 genome v1.1Vigna angularis
crtifL009Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crtifL312Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cctifL0875Cajanus cajan Asha genome v1.0Cajanus cajan
crtifL735Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
tiftifR029Vicia faba cv. Tiffany genome v1.0Vicia faba
pstifL105Pisum sativum Cameor genome v1aPisum sativum
pvtifL233Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pstifL281Pisum sativum Cameor genome v1aPisum sativum
pvtifL327Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvtifL768Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvfhR001Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhR033Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caitifL486Cicer arietinum ICC 4958 genome v2Cicer arietinum
antifL0458Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caitifL796Cicer arietinum ICC 4958 genome v2Cicer arietinum
antifL0517Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caitifL929Cicer arietinum ICC 4958 genome v2Cicer arietinum
caitifL944Cicer arietinum ICC 4958 genome v2Cicer arietinum
antifL0711Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0912Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0917Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0924Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
tifvssR077Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvssR113Vicia sativa cv. Studenica genome v1.0Vicia sativa
cantifL312Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL523Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL602Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat02G0495900-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
jg18016.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan06g028700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cr_08849.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_22920.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
LR48_mrnaVigan01g194200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_004509032.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004511818.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_22762.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Psat2g169560.1Pisum sativum Cameor genome v1aPisum sativum
Phvul.002G014100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg3376.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_22744Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.4g128200.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.4g099120.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.1g301920Vfaba.Tiffany.R1.1g301920_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.1g301920.1_tif_v1-exonVfaba.Tiffany.R1.1g301920.1_tif_v1-exon-chr1L_tif_v1:1130207656..1130207730Vicia fabaexon
Vfaba.Tiffany.R1.1g301920.1_tif_v1-exonVfaba.Tiffany.R1.1g301920.1_tif_v1-exon-chr1L_tif_v1:1130207870..1130208493Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.1g301920.1_tif_v1-cdsVfaba.Tiffany.R1.1g301920.1_tif_v1-cds-chr1L_tif_v1:1130207656..1130207730Vicia fabaCDS
Vfaba.Tiffany.R1.1g301920.1_tif_v1-cdsVfaba.Tiffany.R1.1g301920.1_tif_v1-cds-chr1L_tif_v1:1130207870..1130208493Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.1g301920.1_tif_v1Vfaba.Tiffany.R1.1g301920.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.1g301920.1_tif_v1Vfaba.Tiffany.R1.1g301920.1_tif_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|G7K3Y3|G7K3Y3_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11407026 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 2.904e-40
Identity = 158/235 (67.23%), Postives = 177/235 (75.32%), Query Frame = 0
Query:    1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVATPSVSPVAAPSKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVPVSSPPTPAPAVTPTAEVPAQAPTKPKKKTKKGKKHSAPAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAES---LKKMMGGFALALAAIVFIF 232
            MD KNVLS+AL+CIVFAGVGGQSPSSAPTTSP TV TPS +PVAAP+KPKSPAPVASPK+S    + +  A TVTPA SPAAPVPVAKSPAA+ P VAPVS+PP      S P      S P      S P A  P         AVTP+AEVPA AP+K KKKTKKGKKHSAPAPSP+L GPPAPPVGAPGP LDASSPGPASAADESGAE+   L+K++G  AL LA++VF+F
Sbjct:    1 MDCKNVLSLALICIVFAGVGGQSPSSAPTTSPPTVTTPSAAPVAAPTKPKSPAPVASPKSSPPASSPT--AATVTPAVSPAAPVPVAKSPAASSPVVAPVSTPPKPAPVSSPPAPVPVSSPPTPVPVSSPPTASTP---------AVTPSAEVPAAAPSKSKKKTKKGKKHSAPAPSPALEGPPAPPVGAPGPSLDASSPGPASAADESGAETIRCLQKVIGSLALGLASLVFMF 224          
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A067K7D4|A0A067K7D4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12493 PE=4 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 7.534e-31
Identity = 125/240 (52.08%), Postives = 146/240 (60.83%), Query Frame = 0
Query:    1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVATPSVSPVAAPSKPKSPAPVASPKAS--ASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVPVSSPPT--PAPAVTPTAEVPAQAPTKPKKKTKKGKKHSA-PAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAESLK---KMMGGFALALAAIVFIF 232
            MDRK+V S+AL+CI+ AGVGGQ+P +APT +P+  A P  +P  AP+K KSPAPVA P +S  A TPA+SP    V    +           A  P A AP+SSPP   VPVSSPP   P  SP    P  +P  P   S P T   AP   PTAEVPA  PTK K K      H+A PAP P L  PPAPP  APGP LDASSPGPAS ADESG+ES++   KM+GG AL  AA+  IF
Sbjct:    1 MDRKSVFSVALMCIIVAGVGGQAPGAAPTATPLAPAAPVTAPAKAPAKSKSPAPVAVPVSSPPAKTPAASPTKQKVPAPAAAPV--------ATPPLAAAPISSPP-VAVPVSSPPAKTPAKSPAQSPPSPAPVTPPTSSPPETAPSAPVAAPTAEVPAPTPTKKKSKK-----HAASPAPGPELSSPPAPPTEAPGPSLDASSPGPASVADESGSESIRSVQKMLGGLALGWAAMTLIF 226          
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2C9UXL3|A0A2C9UXL3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G113000 PE=4 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.063e-28
Identity = 110/253 (43.48%), Postives = 140/253 (55.34%), Query Frame = 0
Query:    1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVATPSVSPVA----------APSKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVPVSSPPTPAPAVTPTA--------EVPAQAPTKPKKKTKKGKKHSAPAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAE---SLKKMMGGFALALAAIVFIF 232
            MDRK++L++AL+C+V A VGGQ+P+SAPT +PVT A P  SPV           AP KP++PAPV +P +S    + +   V          P PV            P+++PPP   PVSSPP  VPVSSPP      SP AP PV+ PPT +P              EVPA  P     K K  K ++APAP+P L  PPAPP  APGP  +A+SPGP+ + D+SGAE   SL KM G  AL  A +  +F
Sbjct:    1 MDRKSLLTVALMCLVVASVGGQAPTSAPTATPVTPAAPKASPVTPAGPVAAPAKAPVKPQTPAPVVTPVSSPPASSPTKQTV----------PAPVQT----------PLATPPPAVAPVSSPPAAVPVSSPP----AKSPSAPAPVT-PPTSSPTENAPPAPVAAPTAEVPAPTP----SKKKSKKHNAAPAPAPELSSPPAPPTEAPGPSAEANSPGPSVSDDQSGAETIKSLHKMAGILALGWAIVSLMF 224          
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6D2IYF2|A0A6D2IYF2_9BRAS (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS19798 PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.685e-24
Identity = 95/238 (39.92%), Postives = 120/238 (50.42%), Query Frame = 0
Query:    1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVATPSVSPVAAPSKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVP-VSSPPTPAPAVT---PTAEVPAQAPT-KPKKKTKKGKKHSAPAPSPSLLGPPAPPVGAPGPG-LDASSPGPASAADESGAESLKKMMGGFALALAAIVFIF 232
            MDRK +L++ L+CIVF+GV GQSP+ +PT SP T                                                    +K+PA  P   +P S+P  T  PV+SP    P SS P+P P  SPPAP P   SPP P+P      P+++VPA AP     KKTKK K  +APAP+P LL PPAPP+ APGPG  DAS+P    A D+SGAE    ++G  A+A A I   F
Sbjct:    1 MDRKFLLTVTLICIVFSGVNGQSPTPSPTISPST----------------------------------------------------SKAPAIKPYFPSPDSTP--TASPVTSPSIEAPKSSAPSPTPEISPPAPSPETDSPPAPSPETETPAPSSDVPAPAPAPSEHKKTKKHK--NAPAPAPELLSPPAPPMEAPGPGPSDASAPA---ADDQSGAERRNVLVGAVAIAWALIAMAF 179          
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A022R3M1|A0A022R3M1_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a013804mg PE=4 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.553e-24
Identity = 102/234 (43.59%), Postives = 128/234 (54.70%), Query Frame = 0
Query:    1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVATPSVSPVAAPSKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVPVSS--PPTPAPAVTPTAEVPAQAPTKPKKKTKKGKKHSAPAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAESLKKMMGGFALALAAIVFIF 232
            MDR+    +AL+C+V A VGGQSPS+AP  +P      +      P+KP SP PVA+P ++                       P A +P ++PPA APVSSPP    PVSSPP   PVSSPPT  PV SPP+P PV++  P   +P    +A       T P   TKK KKH AP+P+P+L  PPAPP  APGP  D+ SP P S  DESGAE L       A+ +A + F F
Sbjct:    1 MDRRTGFLLALICLVVATVGGQSPSAAPANAPAAAHVSTPPTATPPTKPASPVPVAAPVST-----------------------PPAAAPVSSPPASAPVSSPPTAAAPVSSPPAYEPVSSPPTVAPVLSPPSPAPVAATPPTESSPPSPASAPPTEPPATAPAPSTKKSKKHGAPSPAPALDSPPAPPTEAPGPSADSISPSPTSLNDESGAEKLMS-RASLAMGVALLCFFF 210          
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A7J9C108|A0A7J9C108_GOSGO (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_015160 PE=4 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.819e-23
Identity = 129/237 (54.43%), Postives = 149/237 (62.87%), Query Frame = 0
Query:    1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVATPSVSPVAAP-SKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVPVSSPPTPAPAVTPTAEVPAQAPTKPKKKTKKGKK-HSAPAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAE---SLKKMMGGFALALAAIVFIF 232
            MD ++  +IAL+CIV AGVGGQSPS+ PT  P     PS +P  AP SK KS AP   P AS  T  S P   T  P+KS A   P   +PA++PP  A VS+PP  PV +S PP   P +  PT  P SS       +SPPTP  A T TAEVPA AP+K K K+KK  K HSAPAPSP  LGPPAPP GAPGP LDASSPG + A DES AE   SL+K++GG AL  AAI  IF
Sbjct:    1 MDHRSAFAIALICIVVAGVGGQSPSATPTKVPPASIMPSTAPSTAPMSKSKSLAPTVPPTASLLT-FSPP---TTVPSKSAAVLAPSKSAPASSPPTAALVSTPP-APVSMSPPPAKSPPAVAPTTPPKSS-------ASPPTPVAAPT-TAEVPAPAPSKSKSKSKKKSKKHSAPAPSPDRLGPPAPPTGAPGPSLDASSPGHSVATDESRAESIKSLQKIIGGLALGWAAIGLIF 224          
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|G7JCS7|G7JCS7_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11409813 PE=4 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 9.343e-23
Identity = 123/236 (52.12%), Postives = 152/236 (64.41%), Query Frame = 0
Query:    1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVATPSVSPVAAPSKPKSPAPVASPKASASTPASSPVAVTVTPAKSP-AAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVPVSSPPTPAPAVTPTAEVPAQAPTKPKKKTKKGKKHSAPAPSPSLLGPPAPPVGAPGPGLDASSPGPASAA-DESGAESLK--KMMGGFALALAAIVFIF 232
            MDR N+ ++A +CI+ AGVGGQSPS+APTTSP T A  + +PV+  S   +P    +  A  ++P SSP      PA SP AA        A++PPAV PVS+PPP PVPV SPPTP PVS         SPPA  PV++P T       T  VPA AP+K KK  KK   H APAPSP+LLGPPAPP GAPGP  DASSPGPA+ A DESGAE+++  K++GG A++  A+V  F
Sbjct:    1 MDRNNLFTLAFICIIVAGVGGQSPSAAPTTSPSTPA--ATTPVS--SPVAAPPTTPTTPAPVASPKSSP------PATSPKAAAPTATPPAASSPPAVTPVSTPPPAPVPVKSPPTPAPVS---------SPPAVTPVAAPTT-------TPAVPAPAPSKGKKNKKK---HGAPAPSPALLGPPAPPAGAPGPSEDASSPGPATTANDESGAETIRSLKVLGGLAMSWMAVVLFF 207          
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A087GKG2|A0A087GKG2_ARAAL (Uncharacterized protein OS=Arabis alpina OX=50452 GN=AALP_AA7G251700 PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.282e-22
Identity = 107/247 (43.32%), Postives = 132/247 (53.44%), Query Frame = 0
Query:    1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVAT-----PSV-SPVAAPSKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVP-----VSSPPTPVPVSSPPAPVPVSSPPTPAPAVTPTAEVPAQAPTKPKKKTKKGKKHSAPAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAESLKKM----MGGFALALAAIVFIF 232
            MDR  +L   L+CIV AGVGGQSP S+PT SP    T     P+V SP+ AP+K    APV+SP  +  TPASSPV       ++P +P PV  +                      SPPTPVP       +P    PVSSPPAP P ++ PT      P A+VPA A     KK  K  K  APAP+P LLGPPAPP  +PGP  DA SPGP+ A D+SGAES + +    +G  A   A ++  F
Sbjct:    1 MDRNFILVATLICIVVAGVGGQSPMSSPTQSPSAPTTSPSKSPTVTSPMVAPAK----APVSSPVVTPKTPASSPV-------EAPKSPAPVIST----------------------SPPTPVPESSPPAPAPKATAPVSSPPAPTPEAATPT-----APVADVPAPA-PSKHKKAPKKSKKHAPAPAPELLGPPAPPTESPGPNSDAFSPGPSVADDQSGAESKRVLRNVAVGAVATVWAVLIMAF 208          
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5B7AJ75|A0A5B7AJ75_DAVIN (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_026293 PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.346e-21
Identity = 120/240 (50.00%), Postives = 146/240 (60.83%), Query Frame = 0
Query:    1 MDRKNVLSIALVCIVFAGVGGQSPSSAPT-TSPVTVATPSVSPVAA--PSKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVPVSSPPTPAPAVTPTAEVPAQAPTKPKKKTKKGKKHSA--PAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAESLK---KMMGGFALALAAIVFIF 232
            MD  N ++ A VCI+ AGVG QSP++AP+ T+P TVATP+ SP +A  PSKPKSP PV +P ++       P AV+                   TPPA AP S+ P      S+PP   PVSSPP  VPVSSPP+PVPV SPP+PAPA  P    PA     P K  KK KKH+A  PAP+P LLGPPAPP  APGP LD+ SP P S +DESGAE LK   K++G   L  A + ++F
Sbjct:   13 MDLNNAVAFAFVCIIVAGVGAQSPAAAPSITTPATVATPATSPTSATAPSKPKSPTPVTAPTSAP------PTAVS-------------------TPPATAPTSAVPAPA---SAPPAKTPVSSPPAQVPVSSPPSPVPVQSPPSPAPATAPAVPPPAVPAPAPSK--KKTKKHNAPSPAPTPELLGPPAPPSEAPGPSLDSVSPSP-SLSDESGAEKLKCVQKVVGSLVLGSAVLSWLF 221          
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5B7AN30|A0A5B7AN30_DAVIN (Putative Proline rich extensin signature (Fragment) OS=Davidia involucrata OX=16924 GN=Din_026292 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.890e-21
Identity = 117/246 (47.56%), Postives = 144/246 (58.54%), Query Frame = 0
Query:    1 MDRKNVLSIALVCIVFAGVGGQSPSSAPT-TSPVTVATPSVSPVAA--PSKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVP------VSSPPTPVPVSSPPTPVPVSSPPAPVPVSSPPTPAPAVTPTAEVPAQAPTKPKKKTKKGKKHSA--PAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAESLK---KMMGGFALALAAIVFIF 232
            MD  N ++ A VCI+ AGVG QSP++AP+ T+P TVATP+ SP +A  PSKPKSP PV +P ++       P AV+                   TPPA AP S+ P           VSSPP  VPVSSPP+PVPV SPP+P P ++P  P PA          AP   KKKT   KKH+A  PAP+P LLGPPAPP  APGP LD+ SP P S +DESGAE LK   K++G   L  A + ++F
Sbjct:   11 MDLNNAVAFAFVCIIVAGVGAQSPAAAPSITTPATVATPATSPTSATAPSKPKSPTPVTAPTSAP------PTAVS-------------------TPPATAPTSAVPAPASAPPAKTPVSSPPAQVPVSSPPSPVPVQSPPSPAPATAPAVPPPAPVSAPPAAVPAPAPSKKKT---KKHNAPSPAPTPELLGPPAPPSEAPGPSLDSVSPSP-SLSDESGAEKLKCVQKVVGSLVLGSAVLSWLF 227          
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|G7K3Y3|G7K3Y3_MEDTR2.904e-4067.23Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|A0A067K7D4|A0A067K7D4_JATCU7.534e-3152.08Uncharacterized protein OS=Jatropha curcas OX=1804... [more]
tr|A0A2C9UXL3|A0A2C9UXL3_MANES1.063e-2843.48Uncharacterized protein OS=Manihot esculenta OX=39... [more]
tr|A0A6D2IYF2|A0A6D2IYF2_9BRAS6.685e-2439.92Uncharacterized protein OS=Microthlaspi erraticum ... [more]
tr|A0A022R3M1|A0A022R3M1_ERYGU7.553e-2443.59Uncharacterized protein OS=Erythranthe guttata OX=... [more]
tr|A0A7J9C108|A0A7J9C108_GOSGO7.819e-2354.43Uncharacterized protein OS=Gossypium gossypioides ... [more]
tr|G7JCS7|G7JCS7_MEDTR9.343e-2352.12Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|A0A087GKG2|A0A087GKG2_ARAAL8.282e-2243.32Uncharacterized protein OS=Arabis alpina OX=50452 ... [more]
tr|A0A5B7AJ75|A0A5B7AJ75_DAVIN5.346e-2150.00Uncharacterized protein (Fragment) OS=Davidia invo... [more]
tr|A0A5B7AN30|A0A5B7AN30_DAVIN8.890e-2147.56Putative Proline rich extensin signature (Fragment... [more]
back to top
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 69..81
score: 36.92
coord: 46..62
score: 29.41
coord: 83..104
score: 39.09
coord: 105..121
score: 40.0
coord: 26..38
score: 35.38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..193
IPR044981Lysine-rich arabinogalactan protein AGP9/17/18PANTHERPTHR37209LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATEDcoord: 1..108

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.1g301920.1_tif_v1 ID=Vfaba.Tiffany.R1.1g301920.1_tif_v1; Name=Vfaba.Tiffany.R1.1g301920.1; organism=Vicia faba; type=mRNA; length=699bp
ATGGATCGCAAAAACGTTCTCTCCATCGCATTGGTCTGCATTGTCTTCGC
CGGCGTCGGAGGTCAATCTCCCTCCTCAGCTCCGACAACATCTCCGGTAA
CAGTCGCAACTCCCTCTGTTTCTCCAGTCGCAGCACCTTCCAAACCAAAA
TCACCAGCTCCGGTTGCTTCTCCAAAAGCATCAGCATCAACGCCAGCTTC
ATCTCCCGTTGCTGTAACCGTCACTCCAGCGAAATCTCCGGCTGCTCCAG
TTCCTGTAGCCAAATCTCCCGCAGCAACACCTCCAGCTGTTGCTCCAGTC
AGTTCTCCACCACCGACACCAGTTCCGGTATCTTCACCACCGACACCAGT
TCCTGTATCTTCACCACCGACACCCGTTCCAGTATCTTCACCACCAGCAC
CTGTTCCAGTAAGCTCTCCACCTACTCCCGCACCTGCCGTAACACCGACG
GCTGAAGTTCCCGCTCAAGCTCCAACAAAACCAAAGAAAAAGACAAAGAA
AGGTAAGAAACACAGTGCACCAGCACCTTCACCGTCATTGTTAGGTCCTC
CCGCTCCTCCGGTTGGTGCTCCCGGACCTGGTCTCGATGCGTCGTCTCCC
GGTCCAGCCTCTGCTGCCGATGAGAGTGGTGCAGAGAGCTTGAAGAAGAT
GATGGGAGGCTTTGCATTGGCCTTGGCTGCCATTGTTTTTATCTTCTAG
back to top

protein sequence of Vfaba.Tiffany.R1.1g301920.1_tif_v1

>Vfaba.Tiffany.R1.1g301920.1_tif_v1 ID=Vfaba.Tiffany.R1.1g301920.1_tif_v1; Name=Vfaba.Tiffany.R1.1g301920.1_tif_v1; organism=Vicia faba; type=polypeptide; length=232bp
MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVATPSVSPVAAPSKPK
SPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPV
SSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVPVSSPPTPAPAVTPT
AEVPAQAPTKPKKKTKKGKKHSAPAPSPSLLGPPAPPVGAPGPGLDASSP
GPASAADESGAESLKKMMGGFALALAAIVFIF
back to top

mRNA from alignment at chr1L:1130207656..1130208493-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.1g301920.1_tif_v1 ID=Vfaba.Tiffany.R1.1g301920.1_tif_v1; Name=Vfaba.Tiffany.R1.1g301920.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1L:1130207656..1130208493- (Vicia faba
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR044981AGP9/17/18
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane