Vfaba.Tiffany.R1.1g301920.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|G7K3Y3|G7K3Y3_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11407026 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.904e-40 Identity = 158/235 (67.23%), Postives = 177/235 (75.32%), Query Frame = 0 Query: 1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVATPSVSPVAAPSKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVPVSSPPTPAPAVTPTAEVPAQAPTKPKKKTKKGKKHSAPAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAES---LKKMMGGFALALAAIVFIF 232 MD KNVLS+AL+CIVFAGVGGQSPSSAPTTSP TV TPS +PVAAP+KPKSPAPVASPK+S + + A TVTPA SPAAPVPVAKSPAA+ P VAPVS+PP S P S P S P A P AVTP+AEVPA AP+K KKKTKKGKKHSAPAPSP+L GPPAPPVGAPGP LDASSPGPASAADESGAE+ L+K++G AL LA++VF+F Sbjct: 1 MDCKNVLSLALICIVFAGVGGQSPSSAPTTSPPTVTTPSAAPVAAPTKPKSPAPVASPKSSPPASSPT--AATVTPAVSPAAPVPVAKSPAASSPVVAPVSTPPKPAPVSSPPAPVPVSSPPTPVPVSSPPTASTP---------AVTPSAEVPAAAPSKSKKKTKKGKKHSAPAPSPALEGPPAPPVGAPGPSLDASSPGPASAADESGAETIRCLQKVIGSLALGLASLVFMF 224
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A067K7D4|A0A067K7D4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12493 PE=4 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.534e-31 Identity = 125/240 (52.08%), Postives = 146/240 (60.83%), Query Frame = 0 Query: 1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVATPSVSPVAAPSKPKSPAPVASPKAS--ASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVPVSSPPT--PAPAVTPTAEVPAQAPTKPKKKTKKGKKHSA-PAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAESLK---KMMGGFALALAAIVFIF 232 MDRK+V S+AL+CI+ AGVGGQ+P +APT +P+ A P +P AP+K KSPAPVA P +S A TPA+SP V + A P A AP+SSPP VPVSSPP P SP P +P P S P T AP PTAEVPA PTK K K H+A PAP P L PPAPP APGP LDASSPGPAS ADESG+ES++ KM+GG AL AA+ IF Sbjct: 1 MDRKSVFSVALMCIIVAGVGGQAPGAAPTATPLAPAAPVTAPAKAPAKSKSPAPVAVPVSSPPAKTPAASPTKQKVPAPAAAPV--------ATPPLAAAPISSPP-VAVPVSSPPAKTPAKSPAQSPPSPAPVTPPTSSPPETAPSAPVAAPTAEVPAPTPTKKKSKK-----HAASPAPGPELSSPPAPPTEAPGPSLDASSPGPASVADESGSESIRSVQKMLGGLALGWAAMTLIF 226
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2C9UXL3|A0A2C9UXL3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G113000 PE=4 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.063e-28 Identity = 110/253 (43.48%), Postives = 140/253 (55.34%), Query Frame = 0 Query: 1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVATPSVSPVA----------APSKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVPVSSPPTPAPAVTPTA--------EVPAQAPTKPKKKTKKGKKHSAPAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAE---SLKKMMGGFALALAAIVFIF 232 MDRK++L++AL+C+V A VGGQ+P+SAPT +PVT A P SPV AP KP++PAPV +P +S + + V P PV P+++PPP PVSSPP VPVSSPP SP AP PV+ PPT +P EVPA P K K K ++APAP+P L PPAPP APGP +A+SPGP+ + D+SGAE SL KM G AL A + +F Sbjct: 1 MDRKSLLTVALMCLVVASVGGQAPTSAPTATPVTPAAPKASPVTPAGPVAAPAKAPVKPQTPAPVVTPVSSPPASSPTKQTV----------PAPVQT----------PLATPPPAVAPVSSPPAAVPVSSPP----AKSPSAPAPVT-PPTSSPTENAPPAPVAAPTAEVPAPTP----SKKKSKKHNAAPAPAPELSSPPAPPTEAPGPSAEANSPGPSVSDDQSGAETIKSLHKMAGILALGWAIVSLMF 224
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6D2IYF2|A0A6D2IYF2_9BRAS (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS19798 PE=4 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.685e-24 Identity = 95/238 (39.92%), Postives = 120/238 (50.42%), Query Frame = 0 Query: 1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVATPSVSPVAAPSKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVP-VSSPPTPAPAVT---PTAEVPAQAPT-KPKKKTKKGKKHSAPAPSPSLLGPPAPPVGAPGPG-LDASSPGPASAADESGAESLKKMMGGFALALAAIVFIF 232 MDRK +L++ L+CIVF+GV GQSP+ +PT SP T +K+PA P +P S+P T PV+SP P SS P+P P SPPAP P SPP P+P P+++VPA AP KKTKK K +APAP+P LL PPAPP+ APGPG DAS+P A D+SGAE ++G A+A A I F Sbjct: 1 MDRKFLLTVTLICIVFSGVNGQSPTPSPTISPST----------------------------------------------------SKAPAIKPYFPSPDSTP--TASPVTSPSIEAPKSSAPSPTPEISPPAPSPETDSPPAPSPETETPAPSSDVPAPAPAPSEHKKTKKHK--NAPAPAPELLSPPAPPMEAPGPGPSDASAPA---ADDQSGAERRNVLVGAVAIAWALIAMAF 179
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A022R3M1|A0A022R3M1_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a013804mg PE=4 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.553e-24 Identity = 102/234 (43.59%), Postives = 128/234 (54.70%), Query Frame = 0 Query: 1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVATPSVSPVAAPSKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVPVSS--PPTPAPAVTPTAEVPAQAPTKPKKKTKKGKKHSAPAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAESLKKMMGGFALALAAIVFIF 232 MDR+ +AL+C+V A VGGQSPS+AP +P + P+KP SP PVA+P ++ P A +P ++PPA APVSSPP PVSSPP PVSSPPT PV SPP+P PV++ P +P +A T P TKK KKH AP+P+P+L PPAPP APGP D+ SP P S DESGAE L A+ +A + F F Sbjct: 1 MDRRTGFLLALICLVVATVGGQSPSAAPANAPAAAHVSTPPTATPPTKPASPVPVAAPVST-----------------------PPAAAPVSSPPASAPVSSPPTAAAPVSSPPAYEPVSSPPTVAPVLSPPSPAPVAATPPTESSPPSPASAPPTEPPATAPAPSTKKSKKHGAPSPAPALDSPPAPPTEAPGPSADSISPSPTSLNDESGAEKLMS-RASLAMGVALLCFFF 210
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A7J9C108|A0A7J9C108_GOSGO (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_015160 PE=4 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.819e-23 Identity = 129/237 (54.43%), Postives = 149/237 (62.87%), Query Frame = 0 Query: 1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVATPSVSPVAAP-SKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVPVSSPPTPAPAVTPTAEVPAQAPTKPKKKTKKGKK-HSAPAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAE---SLKKMMGGFALALAAIVFIF 232 MD ++ +IAL+CIV AGVGGQSPS+ PT P PS +P AP SK KS AP P AS T S P T P+KS A P +PA++PP A VS+PP PV +S PP P + PT P SS +SPPTP A T TAEVPA AP+K K K+KK K HSAPAPSP LGPPAPP GAPGP LDASSPG + A DES AE SL+K++GG AL AAI IF Sbjct: 1 MDHRSAFAIALICIVVAGVGGQSPSATPTKVPPASIMPSTAPSTAPMSKSKSLAPTVPPTASLLT-FSPP---TTVPSKSAAVLAPSKSAPASSPPTAALVSTPP-APVSMSPPPAKSPPAVAPTTPPKSS-------ASPPTPVAAPT-TAEVPAPAPSKSKSKSKKKSKKHSAPAPSPDRLGPPAPPTGAPGPSLDASSPGHSVATDESRAESIKSLQKIIGGLALGWAAIGLIF 224
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|G7JCS7|G7JCS7_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11409813 PE=4 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 9.343e-23 Identity = 123/236 (52.12%), Postives = 152/236 (64.41%), Query Frame = 0 Query: 1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVATPSVSPVAAPSKPKSPAPVASPKASASTPASSPVAVTVTPAKSP-AAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVPVSSPPTPAPAVTPTAEVPAQAPTKPKKKTKKGKKHSAPAPSPSLLGPPAPPVGAPGPGLDASSPGPASAA-DESGAESLK--KMMGGFALALAAIVFIF 232 MDR N+ ++A +CI+ AGVGGQSPS+APTTSP T A + +PV+ S +P + A ++P SSP PA SP AA A++PPAV PVS+PPP PVPV SPPTP PVS SPPA PV++P T T VPA AP+K KK KK H APAPSP+LLGPPAPP GAPGP DASSPGPA+ A DESGAE+++ K++GG A++ A+V F Sbjct: 1 MDRNNLFTLAFICIIVAGVGGQSPSAAPTTSPSTPA--ATTPVS--SPVAAPPTTPTTPAPVASPKSSP------PATSPKAAAPTATPPAASSPPAVTPVSTPPPAPVPVKSPPTPAPVS---------SPPAVTPVAAPTT-------TPAVPAPAPSKGKKNKKK---HGAPAPSPALLGPPAPPAGAPGPSEDASSPGPATTANDESGAETIRSLKVLGGLAMSWMAVVLFF 207
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A087GKG2|A0A087GKG2_ARAAL (Uncharacterized protein OS=Arabis alpina OX=50452 GN=AALP_AA7G251700 PE=4 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.282e-22 Identity = 107/247 (43.32%), Postives = 132/247 (53.44%), Query Frame = 0 Query: 1 MDRKNVLSIALVCIVFAGVGGQSPSSAPTTSPVTVAT-----PSV-SPVAAPSKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVP-----VSSPPTPVPVSSPPAPVPVSSPPTPAPAVTPTAEVPAQAPTKPKKKTKKGKKHSAPAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAESLKKM----MGGFALALAAIVFIF 232 MDR +L L+CIV AGVGGQSP S+PT SP T P+V SP+ AP+K APV+SP + TPASSPV ++P +P PV + SPPTPVP +P PVSSPPAP P ++ PT P A+VPA A KK K K APAP+P LLGPPAPP +PGP DA SPGP+ A D+SGAES + + +G A A ++ F Sbjct: 1 MDRNFILVATLICIVVAGVGGQSPMSSPTQSPSAPTTSPSKSPTVTSPMVAPAK----APVSSPVVTPKTPASSPV-------EAPKSPAPVIST----------------------SPPTPVPESSPPAPAPKATAPVSSPPAPTPEAATPT-----APVADVPAPA-PSKHKKAPKKSKKHAPAPAPELLGPPAPPTESPGPNSDAFSPGPSVADDQSGAESKRVLRNVAVGAVATVWAVLIMAF 208
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5B7AJ75|A0A5B7AJ75_DAVIN (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_026293 PE=4 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.346e-21 Identity = 120/240 (50.00%), Postives = 146/240 (60.83%), Query Frame = 0 Query: 1 MDRKNVLSIALVCIVFAGVGGQSPSSAPT-TSPVTVATPSVSPVAA--PSKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVPVSSPPTPVPVSSPPTPVPVSSPPAPVPVSSPPTPAPAVTPTAEVPAQAPTKPKKKTKKGKKHSA--PAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAESLK---KMMGGFALALAAIVFIF 232 MD N ++ A VCI+ AGVG QSP++AP+ T+P TVATP+ SP +A PSKPKSP PV +P ++ P AV+ TPPA AP S+ P S+PP PVSSPP VPVSSPP+PVPV SPP+PAPA P PA P K KK KKH+A PAP+P LLGPPAPP APGP LD+ SP P S +DESGAE LK K++G L A + ++F Sbjct: 13 MDLNNAVAFAFVCIIVAGVGAQSPAAAPSITTPATVATPATSPTSATAPSKPKSPTPVTAPTSAP------PTAVS-------------------TPPATAPTSAVPAPA---SAPPAKTPVSSPPAQVPVSSPPSPVPVQSPPSPAPATAPAVPPPAVPAPAPSK--KKTKKHNAPSPAPTPELLGPPAPPSEAPGPSLDSVSPSP-SLSDESGAEKLKCVQKVVGSLVLGSAVLSWLF 221
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5B7AN30|A0A5B7AN30_DAVIN (Putative Proline rich extensin signature (Fragment) OS=Davidia involucrata OX=16924 GN=Din_026292 PE=4 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.890e-21 Identity = 117/246 (47.56%), Postives = 144/246 (58.54%), Query Frame = 0 Query: 1 MDRKNVLSIALVCIVFAGVGGQSPSSAPT-TSPVTVATPSVSPVAA--PSKPKSPAPVASPKASASTPASSPVAVTVTPAKSPAAPVPVAKSPAATPPAVAPVSSPPPTPVP------VSSPPTPVPVSSPPTPVPVSSPPAPVPVSSPPTPAPAVTPTAEVPAQAPTKPKKKTKKGKKHSA--PAPSPSLLGPPAPPVGAPGPGLDASSPGPASAADESGAESLK---KMMGGFALALAAIVFIF 232 MD N ++ A VCI+ AGVG QSP++AP+ T+P TVATP+ SP +A PSKPKSP PV +P ++ P AV+ TPPA AP S+ P VSSPP VPVSSPP+PVPV SPP+P P ++P P PA AP KKKT KKH+A PAP+P LLGPPAPP APGP LD+ SP P S +DESGAE LK K++G L A + ++F Sbjct: 11 MDLNNAVAFAFVCIIVAGVGAQSPAAAPSITTPATVATPATSPTSATAPSKPKSPTPVTAPTSAP------PTAVS-------------------TPPATAPTSAVPAPASAPPAKTPVSSPPAQVPVSSPPSPVPVQSPPSPAPATAPAVPPPAPVSAPPAAVPAPAPSKKKT---KKHNAPSPAPTPELLGPPAPPSEAPGPSLDSVSPSP-SLSDESGAEKLKCVQKVVGSLVLGSAVLSWLF 227 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Tiffany.R1.1g301920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 0
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.1g301920.1_tif_v1 ID=Vfaba.Tiffany.R1.1g301920.1_tif_v1; Name=Vfaba.Tiffany.R1.1g301920.1; organism=Vicia faba; type=mRNA; length=699bpback to top protein sequence of Vfaba.Tiffany.R1.1g301920.1_tif_v1 >Vfaba.Tiffany.R1.1g301920.1_tif_v1 ID=Vfaba.Tiffany.R1.1g301920.1_tif_v1; Name=Vfaba.Tiffany.R1.1g301920.1_tif_v1; organism=Vicia faba; type=polypeptide; length=232bpback to top mRNA from alignment at chr1L:1130207656..1130208493- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.1g301920.1_tif_v1 ID=Vfaba.Tiffany.R1.1g301920.1_tif_v1; Name=Vfaba.Tiffany.R1.1g301920.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1L:1130207656..1130208493- (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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