Vfaba.Tiffany.R1.1g322880.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.1g322880.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YX70|A0A1S2YX70_CICAR (uncharacterized protein LOC101515179 OS=Cicer arietinum OX=3827 GN=LOC101515179 PE=4 SV=2) HSP 1 Score: 271.937 bits (694), Expect = 7.638e-91 Identity = 128/162 (79.01%), Postives = 143/162 (88.27%), Query Frame = 0 Query: 1 MAFNATKNLRSMVTRLGGAGTRSFTTSTIPKMKPMSTSIDSAHNSHSISRSSTLKAELTPVYIVCGMVGVAVMFASHTAYQQLARSPTVHVNKKRRESLPEVYDPDRTIDSADKFINGSFFRKITHIQDSNPTVHDPVHPNPFTRARTAETLKSVGIEPSRR 162 MAF A KNLRSMVT LGGAG RSF TST PK+KPMST+ID++HN+H+ SR STLKAELTPVYIVCGMVGVAV ASHTA+QQL RSPTVHVNKKRRESLPEV DPDRT++SADKFINGSF RK++ IQD+ TVHD VHPNPFTR RT ETLKSVG++P+RR Sbjct: 26 MAFKAVKNLRSMVTALGGAGKRSFATSTTPKLKPMSTTIDASHNAHNTSRISTLKAELTPVYIVCGMVGVAVAIASHTAFQQLTRSPTVHVNKKRRESLPEVSDPDRTVNSADKFINGSFLRKVSQIQDNKSTVHDSVHPNPFTRPRTTETLKSVGVDPARR 187
BLAST of Vfaba.Tiffany.R1.1g322880.1 vs. UniProtKB/TrEMBL
Match: tr|G7K3Q0|G7K3Q0_MEDTR (NADH-ubiquinone reductase complex 1 MLRQ subunit OS=Medicago truncatula OX=3880 GN=11440424 PE=4 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 2.886e-90 Identity = 124/161 (77.02%), Postives = 140/161 (86.96%), Query Frame = 0 Query: 1 MAFNATKNLRSMVTRLGGAGTRSFTTSTIPKMKPMSTSIDSAHNSHSISRSSTLKAELTPVYIVCGMVGVAVMFASHTAYQQLARSPTVHVNKKRRESLPEVYDPDRTIDSADKFINGSFFRKITHIQDSNPTVHDPVHPNPFTRARTAETLKSVGIEPSR 161 MAFNA KN+R M+ +LGGAG RSF TST PK+KPMST+ID+ H++HS SR STLKAEL PVYIVCGMVGVA+ A+HTAYQQLARSP VHV+KKRRES PE YDPDRTI+SADKFINGSF RK+ H+QD+ PTVHDPVHPNPFTR RTAETLKSVG+ P R Sbjct: 1 MAFNAAKNVRLMLAQLGGAGKRSFATSTTPKLKPMSTTIDATHDAHSTSRLSTLKAELAPVYIVCGMVGVALTIATHTAYQQLARSPNVHVSKKRRESFPEAYDPDRTINSADKFINGSFLRKMAHVQDTKPTVHDPVHPNPFTRPRTAETLKSVGVHPGR 161
BLAST of Vfaba.Tiffany.R1.1g322880.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5MQ94|A0A6A5MQ94_LUPAL (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00027438 PE=4 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 2.071e-73 Identity = 111/162 (68.52%), Postives = 129/162 (79.63%), Query Frame = 0 Query: 1 MAFNATKNLRSMVTRLGGAGTRSFTTSTIPKMKPMSTSIDSAHNSHSISRSSTLKAELTPVYIVCGMVGVAVMFASHTAYQQLARSPTVHVNKKRRESLPEVYDPDRTIDSADKFINGSFFRKITHIQDSNPTVHDPVHPNPFTRARTAETLKSVGIEPSRR 162 MA+ A KN R MV LGG G RS TST+PKMKPMS ++D AH+SHS R STLKA+L PVYIVCGMV VAV HTAYQQLARSP VHVNKKRRESLPE +PD TI S++ FINGSF RK++HIQ++ T++DP+HPNPFT R AETLKSVGI+PS+R Sbjct: 28 MAYRALKNWRMMVRELGG-GRRSIGTSTVPKMKPMSPTMDPAHDSHSTHRMSTLKADLAPVYIVCGMVVVAVTIGVHTAYQQLARSPAVHVNKKRRESLPEFSEPDHTIQSSNSFINGSFLRKLSHIQENKATLNDPLHPNPFTHPRPAETLKSVGIDPSKR 188
BLAST of Vfaba.Tiffany.R1.1g322880.1 vs. UniProtKB/TrEMBL
Match: tr|I3SGY9|I3SGY9_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 2.278e-70 Identity = 104/158 (65.82%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 4 NATKNLRSMVTRLGGAGTRSFTTSTIPKMKPMSTSIDSAHNSHSISRSSTLKAELTPVYIVCGMVGVAVMFASHTAYQQLARSPTVHVNKKRRESLPEVYDPDRTIDSADKFINGSFFRKITHIQDSNPTVHDPVHPNPFTRARTAETLKSVGIEPSR 161 NA K+ R +T+ G R TST PK+KPMS +ID AH+ HS SR + LKA+LTPVYIVCGMV +A+ +HTAYQQLARSP+V++NKKRRES+ EV DPDRTI+SADKFINGSF RK++ IQ++ T+HDPVHPNP+T RTAETLKSVGIEP R Sbjct: 5 NALKSWRWTLTQQLEEGRRLIATSTTPKLKPMSPAIDGAHHDHSNSRKNALKADLTPVYIVCGMVCMALTIGTHTAYQQLARSPSVNINKKRRESVQEVDDPDRTINSADKFINGSFLRKVSQIQENKSTLHDPVHPNPYTHPRTAETLKSVGIEPGR 162
BLAST of Vfaba.Tiffany.R1.1g322880.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371ICC4|A0A371ICC4_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_02450 PE=4 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 7.409e-69 Identity = 110/156 (70.51%), Postives = 129/156 (82.69%), Query Frame = 0 Query: 7 KNLRSMVTRLGGAGTRSFTTSTIPKMKPMSTSIDSAHNSHSISRSSTLKAELTPVYIVCGMVGVAVMFASHTAYQQLARSPTVHVNKKRRESLPEVYDPDRTIDSADKFINGSFFRKITHIQDSNPTVHDPVHPNPFTRARTAETLKSVGIEPSRR 162 KNL M ++GG G RSFT+ T PK+KPM+ ID+ +S S SR STLKAEL PVYIV GMV VA+ SHTA+QQLARSPTVHVNKKRRES+PEV DPDRTIDSA KFI+GSFFRK++ +Q++ T+HDPVHPNPFTR RTAETLK+VG+EPSRR Sbjct: 3 KNLGLM--KVGG-GRRSFTSPTSPKLKPMA--IDADGDSRSRSRVSTLKAELAPVYIVGGMVCVALAIGSHTAFQQLARSPTVHVNKKRRESVPEVSDPDRTIDSASKFIDGSFFRKLSLVQENKATLHDPVHPNPFTRPRTAETLKTVGVEPSRR 153
BLAST of Vfaba.Tiffany.R1.1g322880.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VN85|A0A1S3VN85_VIGRR (uncharacterized protein LOC106776575 OS=Vigna radiata var. radiata OX=3916 GN=LOC106776575 PE=4 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 9.483e-67 Identity = 103/162 (63.58%), Postives = 127/162 (78.40%), Query Frame = 0 Query: 1 MAFNATKNLRSMVTRLGGAGTRSFTTSTIPKMKPMSTSIDSAHNSHSISRSSTLKAELTPVYIVCGMVGVAVMFASHTAYQQLARSPTVHVNKKRRESLPEVYDPDRTIDSADKFINGSFFRKITHIQDSNPTVHDPVHPNPFTRARTAETLKSVGIEPSRR 162 MAF A KN + LG +G R+FT+ T PKMKP+S +D+ H H+ S ++KAEL PVYIV GMV VA+ ASHT YQQL RSP VHVNKKRRE++PEV DPDRT++SA KFI+GSF RK++HIQ+S T++DPVHPNPFTR RTAETLK+VG+EP+RR Sbjct: 1 MAFRAAKNFPLTLIELG-SGRRAFTSPTTPKMKPVSRVMDAEH--HNSSSGMSVKAELAPVYIVGGMVCVALAIASHTGYQQLVRSPQVHVNKKRRETVPEVSDPDRTMNSAAKFIDGSFLRKVSHIQESKATLNDPVHPNPFTRPRTAETLKTVGVEPARR 159
BLAST of Vfaba.Tiffany.R1.1g322880.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3T7C9|A0A0S3T7C9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.10G238800 PE=4 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.740e-64 Identity = 99/162 (61.11%), Postives = 126/162 (77.78%), Query Frame = 0 Query: 1 MAFNATKNLRSMVTRLGGAGTRSFTTSTIPKMKPMSTSIDSAHNSHSISRSSTLKAELTPVYIVCGMVGVAVMFASHTAYQQLARSPTVHVNKKRRESLPEVYDPDRTIDSADKFINGSFFRKITHIQDSNPTVHDPVHPNPFTRARTAETLKSVGIEPSRR 162 MAF A KN + LG +G R+FT+ T PKMKP+S +D+ H H+ + ++KAEL PVYIV GMV VA+ ASHT YQQL RSP VHVNKKRRE++PEV DPDRT++SA KFI+GSF RK++HIQ++ T++DP+HPNPFTR RT ETLK+VG+EP+RR Sbjct: 1 MAFRAAKNFPLTLVELG-SGRRAFTSPTTPKMKPVSRVMDADH--HNSNSGMSVKAELAPVYIVGGMVCVALAIASHTGYQQLVRSPQVHVNKKRRETVPEVSDPDRTMNSAAKFIDGSFLRKVSHIQENKTTLNDPIHPNPFTRPRTVETLKTVGVEPARR 159
BLAST of Vfaba.Tiffany.R1.1g322880.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TAL5|A0A0L9TAL5_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan442s002400 PE=4 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.740e-64 Identity = 99/162 (61.11%), Postives = 126/162 (77.78%), Query Frame = 0 Query: 1 MAFNATKNLRSMVTRLGGAGTRSFTTSTIPKMKPMSTSIDSAHNSHSISRSSTLKAELTPVYIVCGMVGVAVMFASHTAYQQLARSPTVHVNKKRRESLPEVYDPDRTIDSADKFINGSFFRKITHIQDSNPTVHDPVHPNPFTRARTAETLKSVGIEPSRR 162 MAF A KN + LG +G R+FT+ T PKMKP+S +D+ H H+ + ++KAEL PVYIV GMV VA+ ASHT YQQL RSP VHVNKKRRE++PEV DPDRT++SA KFI+GSF RK++HIQ++ T++DP+HPNPFTR RT ETLK+VG+EP+RR Sbjct: 1 MAFRAAKNFPLTLVELG-SGRRAFTSPTTPKMKPVSRVMDADH--HNSNSGMSVKAELAPVYIVGGMVCVALAIASHTGYQQLVRSPQVHVNKKRRETVPEVSDPDRTMNSAAKFIDGSFLRKVSHIQENKTTLNDPIHPNPFTRPRTVETLKTVGVEPARR 159
BLAST of Vfaba.Tiffany.R1.1g322880.1 vs. UniProtKB/TrEMBL
Match: tr|A0A392M965|A0A392M965_9FABA (Uncharacterized protein OS=Trifolium medium OX=97028 GN=A2U01_0004806 PE=4 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 6.232e-64 Identity = 91/110 (82.73%), Postives = 101/110 (91.82%), Query Frame = 0 Query: 53 TLKAELTPVYIVCGMVGVAVMFASHTAYQQLARSPTVHVNKKRRESLPEVYDPDRTIDSADKFINGSFFRKITHIQDSNPTVHDPVHPNPFTRARTAETLKSVGIEPSRR 162 TLKAEL PVYIVCGMVGVAV+ ASH+A+QQLARSP+VHVNKKRRES PE YDPDR+I+SADKFINGSF RK+ HIQDSNPTVHDPVHPNPFTR R+AETLKSVG+E +R Sbjct: 2 TLKAELAPVYIVCGMVGVAVVLASHSAFQQLARSPSVHVNKKRRESYPEAYDPDRSINSADKFINGSFLRKMAHIQDSNPTVHDPVHPNPFTRPRSAETLKSVGVESGKR 111
BLAST of Vfaba.Tiffany.R1.1g322880.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6LTM2|A0A4D6LTM2_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG4g2798 PE=4 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 2.997e-63 Identity = 99/162 (61.11%), Postives = 122/162 (75.31%), Query Frame = 0 Query: 1 MAFNATKNLRSMVTRLGGAGTRSFTTSTIPKMKPMSTSIDSAHNSHSISRSSTLKAELTPVYIVCGMVGVAVMFASHTAYQQLARSPTVHVNKKRRESLPEVYDPDRTIDSADKFINGSFFRKITHIQDSNPTVHDPVHPNPFTRARTAETLKSVGIEPSRR 162 MAF KN R + LG +G R+FT+ T PKMKP+S +D NS S ++KAEL PVYIV G V VA++ +HTA+QQL RSP VHVNKKRRE+LPEV DPDRT++SA KFI+GSF RK+ IQ++ T++DPVHPNPFTR RT ETLK+VG+EPSRR Sbjct: 1 MAFRIAKNFRLTLIELG-SGRRAFTSPTTPKMKPVSRVMDGDGNSRS---GMSVKAELAPVYIVGGFVCVALVIGTHTAFQQLVRSPQVHVNKKRRETLPEVSDPDRTVNSAGKFIDGSFLRKVGQIQENRATLNDPVHPNPFTRPRTPETLKTVGVEPSRR 158
BLAST of Vfaba.Tiffany.R1.1g322880.1 vs. Araport11
Match: AT5G07330.1 (| NFU1 iron-sulfur cluster protein | Chr5:2316064-2316641 FORWARD LENGTH=165 | 201606) HSP 1 Score: 120.168 bits (300), Expect = 7.098e-35 Identity = 62/162 (38.27%), Postives = 98/162 (60.49%), Query Frame = 0 Query: 1 MAFNATKNLRSMVTRLGGAGTRSFT-TSTIPKMKPMSTSIDSAHNSHSISRSSTLKAELTPVYIVCGMVGVAVMFASHTAYQQLARSPTVHVNKKRRESLPEVYDPDRTIDSADKFINGSFFRKITHIQ--DSNPTVHDPVHPNPFTRARTAETLKSVGIEP 159 MA +T +L+++V RL R++T +T+P+ K ST+ + + ++ K + TPVY+ G++ ++V F +TAY L +P V VNKK RE++PE+ DPDR ++ AD+F N S+FRKI H+Q D + DP+ + F A TLK VG++P Sbjct: 1 MAVRSTGHLKNVVQRL-----RTYTKATTVPRSKAYSTAATEYGGQRTATTAAATKGDFTPVYVSIGLISLSVTFGVYTAYLHLHENPGVRVNKKMRETVPEIEDPDRVLNEADRFANRSWFRKIAHVQEFDKQDVISDPIRKDQFAHKPRALTLKDVGVDP 157
BLAST of Vfaba.Tiffany.R1.1g322880.1 vs. Araport11
Match: AT1G63060.1 (| ribosome biogenesis NEP1-like protein | Chr1:23384105-23384887 FORWARD LENGTH=148 | 201606) HSP 1 Score: 118.627 bits (296), Expect = 1.592e-34 Identity = 66/160 (41.25%), Postives = 88/160 (55.00%), Query Frame = 0 Query: 1 MAFNATKNLRSMVTRLGGAGTRSFTTSTIPKMKPMSTSIDSAHNSHSISRSSTLKAELTPVYIVCGMVGVAVMFASHTAYQQLARSPTVHVNKKRRESLPEVYDPDRTIDSADKFINGSFFRKITHIQD-SNPTVHDPVHPNPFTRARTAETLKSVGIEP 159 MAF T LR + + GG +R F T T D A +++ ++ E PV I+ G VG+AV+ A H+ QQL +P + K RR ++ EV DP+ + SADKFIN S+ RK+ IQD S + DP PNPFT R AETL SVG+ P Sbjct: 1 MAFRITSQLRPVGNQFGG--SRRFAT----------TVADGAKQTYN---KFSIMGEFAPVAIIGGFVGLAVLMAGHSLKQQLMHAPAISTRKNRRAAVAEVDDPENCVSSADKFINKSWLRKVGQIQDKSKAILSDPTRPNPFTTPRNAETLNSVGVAP 145 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.1g322880.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.1g322880.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Tiffany.R1.1g322880.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.1g322880.1_tif_v1 ID=Vfaba.Tiffany.R1.1g322880.1_tif_v1; Name=Vfaba.Tiffany.R1.1g322880.1; organism=Vicia faba; type=mRNA; length=489bpback to top protein sequence of Vfaba.Tiffany.R1.1g322880.1_tif_v1 >Vfaba.Tiffany.R1.1g322880.1_tif_v1 ID=Vfaba.Tiffany.R1.1g322880.1_tif_v1; Name=Vfaba.Tiffany.R1.1g322880.1_tif_v1; organism=Vicia faba; type=polypeptide; length=162bpback to top mRNA from alignment at chr1L:1281525299..1281526170+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.1g322880.1_tif_v1 ID=Vfaba.Tiffany.R1.1g322880.1_tif_v1; Name=Vfaba.Tiffany.R1.1g322880.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1L:1281525299..1281526170+ (Vicia fababack to top |