Vfaba.Tiffany.R1.2g113200.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A392LYM3|A0A392LYM3_9FABA (Sister chromatid cohesion protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0000821 PE=4 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 9.235e-96 Identity = 153/217 (70.51%), Postives = 170/217 (78.34%), Query Frame = 0 Query: 53 IHCSANLPDSLRQASSSNSVLEIP--------------------------RLASVKTQDASELKSTMENLVTDLLTTLNLPEYPASASILEVLCAILIQNDGTSSKDFASRSMAIDILGTIVARLKHDAMICSQEKFWVLQDLLSKDVAPQNYPKDTCCVCLGGRAENLFPCSGCNRLFHTECLDIEEDEVLNQNWYCHMCICSKQLAAEGIICRTE 243 IHCSANLPD+LRQASS NSVLE+ RLASVK QDASELKS MENLVTDLLTTLNLPEYPASASILEVLCAILI N G++SKDFA+RSMAIDILGTI ARLK DA+ICS+EKFWVLQDLLS++ AP +YPKDTCC+CLGGR ENLF CSGCNRLFH +CLDI+E+EV N+NWYCHMCICSKQL C ++ Sbjct: 126 IHCSANLPDTLRQASSGNSVLEVSVDASYPTKCRNEVREACCLFWSRVLQRLASVKAQDASELKSIMENLVTDLLTTLNLPEYPASASILEVLCAILINNAGSNSKDFAARSMAIDILGTIAARLKRDAVICSREKFWVLQDLLSENAAP-HYPKDTCCICLGGRIENLFICSGCNRLFHADCLDIKENEVPNRNWYCHMCICSKQLLVLQSYCNSQ 341
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MZP1|A0A2Z6MZP1_TRISU (Sister chromatid cohesion protein OS=Trifolium subterraneum OX=3900 GN=TSUD_275740 PE=3 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 6.510e-94 Identity = 153/217 (70.51%), Postives = 171/217 (78.80%), Query Frame = 0 Query: 53 IHCSANLPDSLRQASSSNSVLEIP--------------------------RLASVKTQDASELKSTMENLVTDLLTTLNLPEYPASASILEVLCAILIQNDGTSSKDFASRSMAIDILGTIVARLKHDAMICSQEKFWVLQDLLSKDVAPQNYPKDTCCVCLGGRAENLFPCSGCNRLFHTECLDIEEDEVLNQNWYCHMCICSKQLAAEGIICRTE 243 IHCSANLPD+LRQASS NSVLE+ RLASVKTQDASELKS MENLVTDLLTTLNLPEYPASASILEVLCAILI N G++SKDFA+RSMAIDILGTI ARLK DA+ICS+EKFWVLQDLL ++ AP++YPKDTCC+CLGGR ENLF CSGCNRLFH +CLDI+E+EV N+NWYCHMCICSKQL C ++ Sbjct: 452 IHCSANLPDTLRQASSGNSVLEVSVDASYPTKCREAVREACCLFWSRVLQRLASVKTQDASELKSVMENLVTDLLTTLNLPEYPASASILEVLCAILINNAGSNSKDFAARSMAIDILGTIAARLKRDAVICSREKFWVLQDLLGENAAPRHYPKDTCCICLGGRIENLFICSGCNRLFHADCLDIKENEVPNRNWYCHMCICSKQLLVLQSYCNSQ 668
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. UniProtKB/TrEMBL
Match: tr|G7KMP7|G7KMP7_MEDTR (Sister chromatid cohesion protein OS=Medicago truncatula OX=3880 GN=11413944 PE=3 SV=2) HSP 1 Score: 310.457 bits (794), Expect = 2.409e-93 Identity = 154/217 (70.97%), Postives = 170/217 (78.34%), Query Frame = 0 Query: 53 IHCSANLPDSLRQASSSNSVLEIP--------------------------RLASVKTQDASELKSTMENLVTDLLTTLNLPEYPASASILEVLCAILIQNDGTSSKDFASRSMAIDILGTIVARLKHDAMICSQEKFWVLQDLLSKDVAPQNYPKDTCCVCLGGRAENLFPCSGCNRLFHTECLDIEEDEVLNQNWYCHMCICSKQLAAEGIICRTE 243 IHCSANLPD+LRQASS NSVLE+ RLASVKTQDASELKS MENLV DLL TLNLPEYPASASILEVLCAIL+QN G++SKDFASRSMAIDILGTI ARLK DA+ICSQEKFWVLQDLLS+D APQ+YPKDTCCVCLGGR ENLF CSGC+RLFH +CLD++E+EV N+NWYC MCICSKQL C ++ Sbjct: 506 IHCSANLPDNLRQASSGNSVLEVSFDASYPTKCRDAVTEACCLFWRSVLERLASVKTQDASELKSIMENLVMDLLNTLNLPEYPASASILEVLCAILLQNAGSNSKDFASRSMAIDILGTIAARLKRDAVICSQEKFWVLQDLLSEDAAPQHYPKDTCCVCLGGRVENLFKCSGCDRLFHADCLDVKENEVPNRNWYCLMCICSKQLLVLQSYCNSQ 722
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NYE9|A0A2K3NYE9_TRIPR (Nipped-B-like protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g004577 PE=4 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 3.841e-92 Identity = 150/217 (69.12%), Postives = 169/217 (77.88%), Query Frame = 0 Query: 53 IHCSANLPDSLRQASSSNSVLE--------------------------IPRLASVKTQDASELKSTMENLVTDLLTTLNLPEYPASASILEVLCAILIQNDGTSSKDFASRSMAIDILGTIVARLKHDAMICSQEKFWVLQDLLSKDVAPQNYPKDTCCVCLGGRAENLFPCSGCNRLFHTECLDIEEDEVLNQNWYCHMCICSKQLAAEGIICRTE 243 IHCSANLPD+LR ASS NSVLE I R+A+ KTQDASELKS MENLVTDLLTTLNLPEYPASASILEVLCAILI N G++SKDFA+RSMAIDILGTI ARLK DA+ICS+EKFWVLQDLLS++ AP +YPKDTCC+CLGGR ENLF CSGCNRLFH +CLDI+E+EV N+NWYCH+CICSKQL C ++ Sbjct: 506 IHCSANLPDTLRLASSGNSVLEVSVDVSYPTKCRDAVREACGLFWSRVIHRVANAKTQDASELKSIMENLVTDLLTTLNLPEYPASASILEVLCAILINNAGSNSKDFAARSMAIDILGTIAARLKRDAVICSREKFWVLQDLLSENAAPPHYPKDTCCICLGGRIENLFICSGCNRLFHADCLDIKENEVPNRNWYCHICICSKQLLVLQSYCNSQ 722
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3DZ31|A0A1S3DZ31_CICAR (Sister chromatid cohesion protein OS=Cicer arietinum OX=3827 GN=LOC101507646 PE=3 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 1.735e-87 Identity = 145/217 (66.82%), Postives = 162/217 (74.65%), Query Frame = 0 Query: 53 IHCSANLPDSLRQASSSNSVLEI--------------------------PRLASVKTQDASELKSTMENLVTDLLTTLNLPEYPASASILEVLCAILIQNDGTSSKDFASRSMAIDILGTIVARLKHDAMICSQEKFWVLQDLLSKDVAPQNYPKDTCCVCLGGRAENLFPCSGCNRLFHTECLDIEEDEVLNQNWYCHMCICSKQLAAEGIICRTE 243 IHCSANLPD+LR+ASS NSVLE+ RL S KTQD SELKS MENLVTDLLTTLNLPEYPASASILEVLC +LIQN GT+SKD +RSMAIDILGTI ARLK DAMICS+EKFW+L+DLLS+D A ++YPKDTCCVC GGR ENL C GCNR FH +CLDI+EDEV N+NWYCHMCICSKQL C ++ Sbjct: 391 IHCSANLPDTLREASSGNSVLEVLVDASYPTKCREAVTEACCLFWGRVLQRLTSAKTQDTSELKSIMENLVTDLLTTLNLPEYPASASILEVLCVLLIQNAGTNSKDITARSMAIDILGTIAARLKRDAMICSREKFWILRDLLSQDAATRHYPKDTCCVCSGGRVENLVICPGCNRPFHADCLDIKEDEVPNRNWYCHMCICSKQLLVLQSYCNSQ 607
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XHJ3|A0A1S2XHJ3_CICAR (Sister chromatid cohesion protein OS=Cicer arietinum OX=3827 GN=LOC101507646 PE=3 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 2.100e-87 Identity = 145/217 (66.82%), Postives = 162/217 (74.65%), Query Frame = 0 Query: 53 IHCSANLPDSLRQASSSNSVLEI--------------------------PRLASVKTQDASELKSTMENLVTDLLTTLNLPEYPASASILEVLCAILIQNDGTSSKDFASRSMAIDILGTIVARLKHDAMICSQEKFWVLQDLLSKDVAPQNYPKDTCCVCLGGRAENLFPCSGCNRLFHTECLDIEEDEVLNQNWYCHMCICSKQLAAEGIICRTE 243 IHCSANLPD+LR+ASS NSVLE+ RL S KTQD SELKS MENLVTDLLTTLNLPEYPASASILEVLC +LIQN GT+SKD +RSMAIDILGTI ARLK DAMICS+EKFW+L+DLLS+D A ++YPKDTCCVC GGR ENL C GCNR FH +CLDI+EDEV N+NWYCHMCICSKQL C ++ Sbjct: 505 IHCSANLPDTLREASSGNSVLEVLVDASYPTKCREAVTEACCLFWGRVLQRLTSAKTQDTSELKSIMENLVTDLLTTLNLPEYPASASILEVLCVLLIQNAGTNSKDITARSMAIDILGTIAARLKRDAMICSREKFWILRDLLSQDAATRHYPKDTCCVCSGGRVENLVICPGCNRPFHADCLDIKEDEVPNRNWYCHMCICSKQLLVLQSYCNSQ 721
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7HI86|A0A1J7HI86_LUPAN (Sister chromatid cohesion protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_32464 PE=3 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.404e-83 Identity = 139/217 (64.06%), Postives = 156/217 (71.89%), Query Frame = 0 Query: 53 IHCSANLPDSLRQASSSNSVLEIP--------------------------RLASVKTQDASELKSTMENLVTDLLTTLNLPEYPASASILEVLCAILIQNDGTSSKDFASRSMAIDILGTIVARLKHDAMICSQEKFWVLQDLLSKDVAPQNYPKDTCCVCLGGRAENLFPCSGCNRLFHTECLDIEEDEVLNQNWYCHMCICSKQLAAEGIICRTE 243 IHCSANLPD+LRQASS N+VLE+ R ASVKT DASELKS MENLVTDLLTTLNLPEYPAS ILEVLC +L+QN G SKD ++R MAIDILGTI ARLK DA+ICSQEKFW+LQDL S+D A Q+YPKDTCCVCLGGR ENLF C GC RLFH CL I+E EV ++NWYC +C CSKQL G C ++ Sbjct: 487 IHCSANLPDALRQASSGNAVLEVSVDGSYSTKCHEALTDACCLFWSRVLQRFASVKTHDASELKSIMENLVTDLLTTLNLPEYPASVPILEVLCVLLLQNAGPKSKDVSARCMAIDILGTIAARLKRDALICSQEKFWILQDLHSQDTATQHYPKDTCCVCLGGRLENLFMCHGCQRLFHANCLGIKEHEVSSRNWYCQICTCSKQLLVLGSYCNSQ 703
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371FA91|A0A371FA91_MUCPR (Sister chromatid cohesion protein (Fragment) OS=Mucuna pruriens OX=157652 GN=SCC2 PE=3 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 2.928e-82 Identity = 136/207 (65.70%), Postives = 155/207 (74.88%), Query Frame = 0 Query: 53 IHCSANLPDSLRQASSSNSVLE--------------------------IPRLASVKTQDASELKSTMENLVTDLLTTLNLPEYPASASILEVLCAILIQNDGTSSKDFASRSMAIDILGTIVARLKHDAMICSQEKFWVLQDLLSKDVAPQNYPKDTCCVCLGGRAENLFPCSGCNRLFHTECLDIEEDEVLNQNWYCHMCICSKQL 233 IHCSANLPD+LR+AS+ N+VLE + R ASVKTQDASELKS +ENLVTDLLTTLNLPEYPASA ILEVLC +L+QN G SKD ++RSMAIDILGTI ARLK DA++CSQEKFW+LQDLLS+D A Q+YPKDTCCVCLGGR ENLF C GC RLFH +CL I+E EV ++NW C CIC KQL Sbjct: 505 IHCSANLPDALRKASNGNAVLEASVDASYPIKCHEAATEACCLFWSRVLQRFASVKTQDASELKSIIENLVTDLLTTLNLPEYPASAPILEVLCVLLLQNAGPKSKDVSARSMAIDILGTIAARLKRDALVCSQEKFWILQDLLSQDAATQHYPKDTCCVCLGGRVENLFICHGCQRLFHADCLGIKEHEVSSRNWSCQTCICHKQL 711
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5N8J1|A0A6A5N8J1_LUPAL (Sister chromatid cohesion protein OS=Lupinus albus OX=3870 GN=Lal_00005918 PE=3 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 1.731e-81 Identity = 137/207 (66.18%), Postives = 153/207 (73.91%), Query Frame = 0 Query: 53 IHCSANLPDSLRQASSSNSVLEIP--------------------------RLASVKTQDASELKSTMENLVTDLLTTLNLPEYPASASILEVLCAILIQNDGTSSKDFASRSMAIDILGTIVARLKHDAMICSQEKFWVLQDLLSKDVAPQNYPKDTCCVCLGGRAENLFPCSGCNRLFHTECLDIEEDEVLNQNWYCHMCICSKQL 233 IHCSANLPD+LRQASS N+VLE+ RLASVKT DASELKS MENLVTDLLTTLNLPEYPAS ILEVLC +L+QN G SKD ++R MAIDILGTI ARLK DA+ICSQEKFW+LQDLLS+D + Q+ PKDTCCVCLGGR ENLF C GC RLFH CL I+E EV ++NWYC +CI SKQL Sbjct: 487 IHCSANLPDALRQASSGNAVLEVSVDGSYATKCHEALTDACCLFWSRVLQRLASVKTHDASELKSIMENLVTDLLTTLNLPEYPASVPILEVLCVLLLQNAGPKSKDVSARCMAIDILGTIAARLKRDALICSQEKFWILQDLLSQDTSKQHCPKDTCCVCLGGRVENLFMCHGCQRLFHANCLGIKEHEVSSRNWYCQICISSKQL 693
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4QFI2|A0A6A4QFI2_LUPAL (Sister chromatid cohesion protein OS=Lupinus albus OX=3870 GN=Lalb_Chr06g0175001 PE=3 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 1.785e-81 Identity = 137/207 (66.18%), Postives = 153/207 (73.91%), Query Frame = 0 Query: 53 IHCSANLPDSLRQASSSNSVLEIP--------------------------RLASVKTQDASELKSTMENLVTDLLTTLNLPEYPASASILEVLCAILIQNDGTSSKDFASRSMAIDILGTIVARLKHDAMICSQEKFWVLQDLLSKDVAPQNYPKDTCCVCLGGRAENLFPCSGCNRLFHTECLDIEEDEVLNQNWYCHMCICSKQL 233 IHCSANLPD+LRQASS N+VLE+ RLASVKT DASELKS MENLVTDLLTTLNLPEYPAS ILEVLC +L+QN G SKD ++R MAIDILGTI ARLK DA+ICSQEKFW+LQDLLS+D + Q+ PKDTCCVCLGGR ENLF C GC RLFH CL I+E EV ++NWYC +CI SKQL Sbjct: 505 IHCSANLPDALRQASSGNAVLEVSVDGSYATKCHEALTDACCLFWSRVLQRLASVKTHDASELKSIMENLVTDLLTTLNLPEYPASVPILEVLCVLLLQNAGPKSKDVSARCMAIDILGTIAARLKRDALICSQEKFWILQDLLSQDTSKQHCPKDTCCVCLGGRVENLFMCHGCQRLFHANCLGIKEHEVSSRNWYCQICISSKQL 711
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. UniProtKB/Swiss-Prot
Match: sp|A5HEI1|SCC2_ARATH (Sister chromatid cohesion protein SCC2 OS=Arabidopsis thaliana OX=3702 GN=SCC2 PE=1 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.423e-53 Identity = 106/262 (40.46%), Postives = 149/262 (56.87%), Query Frame = 0 Query: 17 RNFIIWAITTALASDSAQRKYLRAKTDPDD---------YCFTYSIHCSANLPDSLRQASSSNSVLE--------------------------IPRLASVKTQDASELKSTMENLVTDLLTTLNLPEYPASASILEVLCAILIQNDGTSSKDFASRSMAIDILGTIVARLKHDAMICSQEKFWVLQDLLSKDVAPQNYPKDTCCVCLGGRAENLFPCSGCNRLFHTECLDIEEDEVLNQNWYCHMCICSKQLAAEGIICRTE 243 R ++I I+ L + ++ LRA PD+ +H S +LP++ RQA+S NS+LE + R S K QDASE+K +ENLV DLLT LNLPEYP+ + ILEVLC IL+ N G SKD ++R MAI++LGTI ARLK DA++CS+++FW L + S+ Q KD C CLG RA NL C C R FH +CL ++E ++ ++NW+C +C+C +QL C+T+ Sbjct: 501 RTYVIDEISQLLWKLPSSKRALRAYLLPDEEQRQIQMVTALLIQLVHNSTSLPETSRQAASGNSILETSVDVGYLTKCHEAATETCCLFWTRVLERFTSFKGQDASEIKLIIENLVMDLLTALNLPEYPSVSPILEVLCVILLHNAGLKSKDVSARIMAIELLGTIAARLKRDAVLCSKDRFWTLLESDSEISVDQVCTKD-CTFCLGKRAGNLLVCQICQRRFHGDCLGLKELDISSRNWHCPLCVCKRQLLVLQSYCKTD 761
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. Araport11
Match: AT5G15540.1 (| PHD finger family protein | Chr5:5047887-5057411 REVERSE LENGTH=1846 | 201606) HSP 1 Score: 189.119 bits (479), Expect = 1.456e-54 Identity = 106/262 (40.46%), Postives = 149/262 (56.87%), Query Frame = 0 Query: 17 RNFIIWAITTALASDSAQRKYLRAKTDPDD---------YCFTYSIHCSANLPDSLRQASSSNSVLE--------------------------IPRLASVKTQDASELKSTMENLVTDLLTTLNLPEYPASASILEVLCAILIQNDGTSSKDFASRSMAIDILGTIVARLKHDAMICSQEKFWVLQDLLSKDVAPQNYPKDTCCVCLGGRAENLFPCSGCNRLFHTECLDIEEDEVLNQNWYCHMCICSKQLAAEGIICRTE 243 R ++I I+ L + ++ LRA PD+ +H S +LP++ RQA+S NS+LE + R S K QDASE+K +ENLV DLLT LNLPEYP+ + ILEVLC IL+ N G SKD ++R MAI++LGTI ARLK DA++CS+++FW L + S+ Q KD C CLG RA NL C C R FH +CL ++E ++ ++NW+C +C+C +QL C+T+ Sbjct: 501 RTYVIDEISQLLWKLPSSKRALRAYLLPDEEQRQIQMVTALLIQLVHNSTSLPETSRQAASGNSILETSVDVGYLTKCHEAATETCCLFWTRVLERFTSFKGQDASEIKLIIENLVMDLLTALNLPEYPSVSPILEVLCVILLHNAGLKSKDVSARIMAIELLGTIAARLKRDAVLCSKDRFWTLLESDSEISVDQVCTKD-CTFCLGKRAGNLLVCQICQRRFHGDCLGLKELDISSRNWHCPLCVCKRQLLVLQSYCKTD 761
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. Araport11
Match: AT5G15540.2 (| PHD finger family protein | Chr5:5047887-5057411 REVERSE LENGTH=1844 | 201606) HSP 1 Score: 189.119 bits (479), Expect = 1.498e-54 Identity = 106/262 (40.46%), Postives = 149/262 (56.87%), Query Frame = 0 Query: 17 RNFIIWAITTALASDSAQRKYLRAKTDPDD---------YCFTYSIHCSANLPDSLRQASSSNSVLE--------------------------IPRLASVKTQDASELKSTMENLVTDLLTTLNLPEYPASASILEVLCAILIQNDGTSSKDFASRSMAIDILGTIVARLKHDAMICSQEKFWVLQDLLSKDVAPQNYPKDTCCVCLGGRAENLFPCSGCNRLFHTECLDIEEDEVLNQNWYCHMCICSKQLAAEGIICRTE 243 R ++I I+ L + ++ LRA PD+ +H S +LP++ RQA+S NS+LE + R S K QDASE+K +ENLV DLLT LNLPEYP+ + ILEVLC IL+ N G SKD ++R MAI++LGTI ARLK DA++CS+++FW L + S+ Q KD C CLG RA NL C C R FH +CL ++E ++ ++NW+C +C+C +QL C+T+ Sbjct: 499 RTYVIDEISQLLWKLPSSKRALRAYLLPDEEQRQIQMVTALLIQLVHNSTSLPETSRQAASGNSILETSVDVGYLTKCHEAATETCCLFWTRVLERFTSFKGQDASEIKLIIENLVMDLLTALNLPEYPSVSPILEVLCVILLHNAGLKSKDVSARIMAIELLGTIAARLKRDAVLCSKDRFWTLLESDSEISVDQVCTKD-CTFCLGKRAGNLLVCQICQRRFHGDCLGLKELDISSRNWHCPLCVCKRQLLVLQSYCKTD 759 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 1
BLAST of Vfaba.Tiffany.R1.2g113200.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.2g113200.1_tif_v1 ID=Vfaba.Tiffany.R1.2g113200.1_tif_v1; Name=Vfaba.Tiffany.R1.2g113200.1; organism=Vicia faba; type=mRNA; length=735bpback to top protein sequence of Vfaba.Tiffany.R1.2g113200.1_tif_v1 >Vfaba.Tiffany.R1.2g113200.1_tif_v1 ID=Vfaba.Tiffany.R1.2g113200.1_tif_v1; Name=Vfaba.Tiffany.R1.2g113200.1_tif_v1; organism=Vicia faba; type=polypeptide; length=244bpback to top mRNA from alignment at chr2:863876652..863877671- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.2g113200.1_tif_v1 ID=Vfaba.Tiffany.R1.2g113200.1_tif_v1; Name=Vfaba.Tiffany.R1.2g113200.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:863876652..863877671- (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
|