Vfaba.Tiffany.R1.2g134760.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NGI6|A0A2Z6NGI6_TRISU (Uncharacterized protein (Fragment) OS=Trifolium subterraneum OX=3900 GN=TSUD_155510 PE=3 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 1.931e-92 Identity = 134/176 (76.14%), Postives = 153/176 (86.93%), Query Frame = 0 Query: 6 KIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKGTWFWDYGEEIDSSFNINYTDKIKFQVQSVSYPPIPVEQPKESKPFAPMLVS 181 KIEHKLTLPP LLALPI EAI +ELERLFLDKVIA LGLC+SVYDIIS++GGS+FP DGAPTYL VFNLIMFRPF GEIIT KL+ SDADGLRLS+ FFDDIYIP HH+PNP+ YEP +N KGTW+WD+GEE +F I+ + +IKF VQSVSYPPIPVEQPK+SKPFAPM+V+ Sbjct: 1 KIEHKLTLPPYLLALPIREAILSELERLFLDKVIAKLGLCISVYDIISIKGGSVFPSDGAPTYLAVFNLIMFRPFNGEIITAKLIGSDADGLRLSVGFFDDIYIPKHHMPNPSHYEPATTNSKKGTWYWDFGEE---AFPIDDSVEIKFAVQSVSYPPIPVEQPKDSKPFAPMVVN 173
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151SJW3|A0A151SJW3_CAJCA (DNA-directed RNA polymerase III subunit rpc8 OS=Cajanus cajan OX=3821 GN=KK1_001235 PE=3 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 4.077e-89 Identity = 132/181 (72.93%), Postives = 150/181 (82.87%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKGTWFWDYGEEIDSSFNINYTDKIKFQVQSVSYPPIPVEQPKESKPFAPMLVS 181 MFYLS+IEHKL+LPP+ L LPI EAIH ELE+LFLDKVIANLGLC+SVYDI S++GG IF GDGAPT+ VVFNLIMFRPF GEIIT KL SSDADGLRL++ FFDDIY+P HH+P PN + E N KG WFWD+ D S+ I TD IKF+VQ+VSYPPIPVEQPKESKPFAPMLV+ Sbjct: 1 MFYLSRIEHKLSLPPTRLVLPIREAIHMELEKLFLDKVIANLGLCISVYDIRSIDGGFIFAGDGAPTFTVVFNLIMFRPFVGEIITAKLFSSDADGLRLTLGFFDDIYVPAHHLPYPNHFVAEQVNSKKGVWFWDFN---DQSYPIEDTDVIKFRVQNVSYPPIPVEQPKESKPFAPMLVT 178
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P5N8B5|A0A6P5N8B5_ARADU (DNA-directed RNA polymerase III subunit RPC8 isoform X2 OS=Arachis duranensis OX=130453 GN=LOC107475699 PE=3 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 3.858e-87 Identity = 128/181 (70.72%), Postives = 152/181 (83.98%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKGTWFWDYGEEIDSSFNINYTDKIKFQVQSVSYPPIPVEQPKESKPFAPMLVS 181 MFYLSKIEH L LP L+ PI EAIHTELE+LFLDKVIANLGLCVSVYDI S+EGG I+PGDGAPTY VVFNLIMFRPF GEI+T KL+SSDADGLRLS+ FFDDIY+P H+P+PN ++ E+ N KGTW+W Y E+ S+ ++ +D IKF++Q+V+YP IPVEQPKESKPFAPMLV+ Sbjct: 30 MFYLSKIEHTLPLPAPQLSRPIREAIHTELEKLFLDKVIANLGLCVSVYDIKSIEGGFIYPGDGAPTYTVVFNLIMFRPFVGEIMTAKLLSSDADGLRLSLGFFDDIYVPLQHLPSPNEFKAESKNSTKGTWYWKYEEQ---SYPVDDSDMIKFRIQNVTYPSIPVEQPKESKPFAPMLVT 207
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4CG12|A0A6P4CG12_ARADU (DNA-directed RNA polymerase III subunit RPC8 isoform X4 OS=Arachis duranensis OX=130453 GN=LOC107475699 PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 1.465e-86 Identity = 128/181 (70.72%), Postives = 152/181 (83.98%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKGTWFWDYGEEIDSSFNINYTDKIKFQVQSVSYPPIPVEQPKESKPFAPMLVS 181 MFYLSKIEH L LP L+ PI EAIHTELE+LFLDKVIANLGLCVSVYDI S+EGG I+PGDGAPTY VVFNLIMFRPF GEI+T KL+SSDADGLRLS+ FFDDIY+P H+P+PN ++ E+ N KGTW+W Y E+ S+ ++ +D IKF++Q+V+YP IPVEQPKESKPFAPMLV+ Sbjct: 1 MFYLSKIEHTLPLPAPQLSRPIREAIHTELEKLFLDKVIANLGLCVSVYDIKSIEGGFIYPGDGAPTYTVVFNLIMFRPFVGEIMTAKLLSSDADGLRLSLGFFDDIYVPLQHLPSPNEFKAESKNSTKGTWYWKYEEQ---SYPVDDSDMIKFRIQNVTYPSIPVEQPKESKPFAPMLVT 178
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4CHF4|A0A6P4CHF4_ARADU (DNA-directed RNA polymerase III subunit RPC8 isoform X3 OS=Arachis duranensis OX=130453 GN=LOC107475699 PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 1.780e-86 Identity = 128/181 (70.72%), Postives = 152/181 (83.98%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKGTWFWDYGEEIDSSFNINYTDKIKFQVQSVSYPPIPVEQPKESKPFAPMLVS 181 MFYLSKIEH L LP L+ PI EAIHTELE+LFLDKVIANLGLCVSVYDI S+EGG I+PGDGAPTY VVFNLIMFRPF GEI+T KL+SSDADGLRLS+ FFDDIY+P H+P+PN ++ E+ N KGTW+W Y E+ S+ ++ +D IKF++Q+V+YP IPVEQPKESKPFAPMLV+ Sbjct: 12 MFYLSKIEHTLPLPAPQLSRPIREAIHTELEKLFLDKVIANLGLCVSVYDIKSIEGGFIYPGDGAPTYTVVFNLIMFRPFVGEIMTAKLLSSDADGLRLSLGFFDDIYVPLQHLPSPNEFKAESKNSTKGTWYWKYEEQ---SYPVDDSDMIKFRIQNVTYPSIPVEQPKESKPFAPMLVT 189
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P5N663|A0A6P5N663_ARADU (DNA-directed RNA polymerase III subunit RPC8 isoform X1 OS=Arachis duranensis OX=130453 GN=LOC107475699 PE=3 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 2.339e-86 Identity = 128/181 (70.72%), Postives = 152/181 (83.98%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKGTWFWDYGEEIDSSFNINYTDKIKFQVQSVSYPPIPVEQPKESKPFAPMLVS 181 MFYLSKIEH L LP L+ PI EAIHTELE+LFLDKVIANLGLCVSVYDI S+EGG I+PGDGAPTY VVFNLIMFRPF GEI+T KL+SSDADGLRLS+ FFDDIY+P H+P+PN ++ E+ N KGTW+W Y E+ S+ ++ +D IKF++Q+V+YP IPVEQPKESKPFAPMLV+ Sbjct: 30 MFYLSKIEHTLPLPAPQLSRPIREAIHTELEKLFLDKVIANLGLCVSVYDIKSIEGGFIYPGDGAPTYTVVFNLIMFRPFVGEIMTAKLLSSDADGLRLSLGFFDDIYVPLQHLPSPNEFKAESKNSTKGTWYWKYEEQ---SYPVDDSDMIKFRIQNVTYPSIPVEQPKESKPFAPMLVT 207
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q7XJ48|A0A3Q7XJ48_CICAR (DNA-directed RNA polymerase III subunit RPC8-like OS=Cicer arietinum OX=3827 GN=LOC101506945 PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 6.672e-85 Identity = 140/181 (77.35%), Postives = 155/181 (85.64%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKG-TWFWDYGEEIDSSFNINYTDKIKFQVQSVSYPPIPVEQPKESKPFAPMLV 180 MFYLS+IEHKL LPPSLL+LPI +AIHTELE+LFLDKVIANLGLC VYDIIS+EGG IFPGDGAPTY VVFNLIMFRP GEIIT KL SSDADGLRLS+ FFDDIYIPTHH+PNP+ ++P NK WFWDY +E S+ I+ +D+IKFQVQSVSYPPIPVEQPKESKPFAPMLV Sbjct: 1 MFYLSRIEHKLRLPPSLLSLPIRDAIHTELEKLFLDKVIANLGLCTCVYDIISIEGGFIFPGDGAPTYTVVFNLIMFRPIMGEIITAKLHSSDADGLRLSLGFFDDIYIPTHHMPNPSHFDPIPGKSNKSVVWFWDYKKEEGLSYPIDSSDEIKFQVQSVSYPPIPVEQPKESKPFAPMLV 181
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/TrEMBL
Match: tr|G7L7Y4|G7L7Y4_MEDTR (DNA-directed RNA polymerase III protein OS=Medicago truncatula OX=3880 GN=11417037 PE=3 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 1.614e-84 Identity = 128/181 (70.72%), Postives = 149/181 (82.32%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKGTWFWDYGEEIDSSFNINYTDKIKFQVQSVSYPPIPVEQPKESKPFAPMLVS 181 MFYLSKIEHK LPP LLA PI EAI +ELERLFLDKVI LGLC+SVYDI S+EGGSIFPG GAPTY VVFNLIMFRPFPGEII+ K++S DADG+RLS+ FF+DIYIPTHH+P P+ Y +N+ + W W+YGEE D FNI +++I+FQV SVSYP IPVEQ KESKPFAPM+V+ Sbjct: 1 MFYLSKIEHKFALPPHLLARPIREAIQSELERLFLDKVIQKLGLCISVYDITSIEGGSIFPGAGAPTYQVVFNLIMFRPFPGEIISAKVMSLDADGVRLSLGFFEDIYIPTHHMPYPSYYISKNNTRK---WTWEYGEETD-EFNIEISNEIRFQVLSVSYPTIPVEQAKESKPFAPMVVN 177
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/TrEMBL
Match: tr|V7AKM7|V7AKM7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_010G020200g PE=3 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.478e-83 Identity = 128/194 (65.98%), Postives = 150/194 (77.32%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNK-------------NKGTWFWDYGEEIDSSFNINYTDKIKFQVQSVSYPPIPVEQPKESKPFAPMLVS 181 MFYLSKIEHKL LPPS L LPI EAIH ELE+LFLDKVIAN+GLC+SVYDI S++GG IFPGDGAPTY VVFNLIMFRPF GEIIT +L+SSD+DGLRL++ FF+DIY+P HH+P PN + + K KG W+WD+ E+ + I TD IKF+VQ+VSYP IPVEQPKESKPFAPMLV+ Sbjct: 1 MFYLSKIEHKLPLPPSRLVLPIREAIHMELEKLFLDKVIANVGLCISVYDIRSIDGGFIFPGDGAPTYTVVFNLIMFRPFVGEIITARLISSDSDGLRLTLGFFEDIYVPAHHMPYPNHFVEDEQGKRVSSSEESTTNSVRKGVWYWDFNEQ---EYPIQETDVIKFRVQNVSYPQIPVEQPKESKPFAPMLVT 191
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Z517|A0A1S2Z517_CICAR (DNA-directed RNA polymerase III subunit RPC8-like OS=Cicer arietinum OX=3827 GN=LOC101505320 PE=3 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 7.147e-83 Identity = 137/181 (75.69%), Postives = 153/181 (84.53%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKG-TWFWDYGEEIDSSFNINYTDKIKFQVQSVSYPPIPVEQPKESKPFAPMLV 180 MFYLS+IEHKL LPPSLL+LPI +AIH ELE+LFLDKVIANLGLC VYDIIS+EGG IF GDGAPTY VVFNLIMFRP GEIIT KL SSDADGLRLS+ FFDDIYIPTHH+PNP+ ++P NK WFWD+ +E S+ I+ +D+IKFQVQSVSYPPIPVEQPKESKPFAPMLV Sbjct: 1 MFYLSRIEHKLRLPPSLLSLPIRDAIHMELEKLFLDKVIANLGLCTCVYDIISIEGGFIFAGDGAPTYTVVFNLIMFRPIMGEIITAKLHSSDADGLRLSLGFFDDIYIPTHHMPNPSHFDPMPGKSNKSVVWFWDFKKEEGLSYPIDSSDEIKFQVQSVSYPPIPVEQPKESKPFAPMLV 181
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/Swiss-Prot
Match: sp|P35718|RPC8_YEAST (DNA-directed RNA polymerase III subunit RPC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPC25 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 3.233e-30 Identity = 61/174 (35.06%), Postives = 100/174 (57.47%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLS-IEFFDDIYIPTHHVPNPNRYEPENSNKNKGTWFWDYGEEIDSSFNINYTDKIKFQVQSVSYPPIPVEQPKESK 173 MF LSKI + +PP AI +L F +K+I N+GLC+++YD++++E G + PGDG+ V F ++F+PF GEI+TG + A+G+++S + FDDI+IP + + Y PE S W W EE F++N +KI+F+++ + + + PKE + Sbjct: 1 MFILSKIADLVRIPPDQFHRDTISAITHQLNNKFANKIIPNVGLCITIYDLLTVEEGQLKPGDGSSYINVTFRAVVFKPFLGEIVTGWISKCTAEGIKVSLLGIFDDIFIPQNMLFEGCYYTPEES-----AWIWPMDEETKLYFDVN--EKIRFRIEREVFVDVKPKSPKERE 167
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/Swiss-Prot
Match: sp|O94285|RPC8_SCHPO (DNA-directed RNA polymerase III subunit rpc8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpc25 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.379e-29 Identity = 64/178 (35.96%), Postives = 101/178 (56.74%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKGTWFW-----DYGEEIDSSFNINYTDKIKFQVQSVSYPPIPVEQPKESK 173 MF LS+ +++ PS P EA+ E+ + + +KVI N+GL + VYD + + G I GDG+ VVF LI+FRPF GE++ GK+ S +G+R++I FFDDI+IP + +P + P+ W W D E + F+I+ ++I+FQ++S + I PK +K Sbjct: 1 MFLLSRFSDIISIHPSNFWKPTKEALAEEIHKKYANKVIQNIGLAICVYDFLKIGEGIIKYGDGSSYMNVVFRLIIFRPFRGEVMLGKIKSCSEEGIRVTISFFDDIFIPKDMLFDPCVFRPDER-----AWVWKIEGEDGSEGTELYFDID--EEIRFQIESEDFVDI---SPKRNK 168
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9Y535|RPC8_HUMAN (DNA-directed RNA polymerase III subunit RPC8 OS=Homo sapiens OX=9606 GN=POLR3H PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.781e-25 Identity = 51/162 (31.48%), Postives = 89/162 (54.94%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKGTWFWDY-GEEIDSSFNINYTDKIKFQVQSVSY 161 MF L ++ + +PP + ++I EL + +KV+ N+GLC+ ++DI +E +FPGDGA V F ++F PF EI+ GK+ +G+ +S+ FFDDI IP + P ++ ++ + W W+Y EE ++ ++I+F+V S+ Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRCVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKF-----DEAEQVWVWEYETEEGAHDLYMDTGEEIRFRVVDESF 157
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q557J3|RPC8_DICDI (DNA-directed RNA polymerase III subunit rpc8 OS=Dictyostelium discoideum OX=44689 GN=polr3h-1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.751e-25 Identity = 56/193 (29.02%), Postives = 100/193 (51.81%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKGTWFWDYGEEIDSSFNINYTDKIKFQVQSVSYPPIPVEQPKESKPFAPMLVSDK---RNFRRKQ 190 MF+L IE K+ + PS + + I E+E+ + KV+ N GL V++YDI+ + GDG +V F +++F+PF GE++ G + S +++S+ FF +IY+ +PNP+ Y N+ +G W+W++ E + +++F++ V + P + QP S D R ++ KQ Sbjct: 1 MFHLITIEDKVRIAPSQFNNEV-QTIEDEIEKKYTSKVVLNAGLFVALYDILGTGDSYVHSGDGGAHLMVRFRMVVFKPFKGEVLEGVIKKSSRQSIQISLGFFHEIYLNPIELPNPSNY-----NQEEGLWYWEWNE---NQLFFEDGGRVRFKIDQVEFNP-EISQPAPSPKNVNTEAMDSYSLREYKEKQ 183
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9D2C6|RPC8_MOUSE (DNA-directed RNA polymerase III subunit RPC8 OS=Mus musculus OX=10090 GN=Polr3h PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 6.523e-25 Identity = 51/162 (31.48%), Postives = 89/162 (54.94%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKGTWFWDY-GEEIDSSFNINYTDKIKFQVQSVSY 161 MF L ++ + +PP + ++I EL + +KV+ N+GLC+ ++DI +E +FPGDGA V F ++F PF EI+ GK+ +G+ +S+ FFDDI IP + P ++ ++ + W W+Y EE ++ ++I+F+V S+ Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKF-----DEAEQVWVWEYETEEGAHDLYMDTGEEIRFRVVDESF 157
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q2T9X1|RPC8_BOVIN (DNA-directed RNA polymerase III subunit RPC8 OS=Bos taurus OX=9913 GN=POLR3H PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.346e-24 Identity = 50/162 (30.86%), Postives = 89/162 (54.94%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKGTWFWDY-GEEIDSSFNINYTDKIKFQVQSVSY 161 MF L ++ + +PP + ++I EL + +KV+ N+GLC+ ++DI +E +FPGDGA V F ++F PF EI+ GK+ +G+ +S+ FFDDI IP + P ++ ++ + W W+Y EE ++ ++++F+V S+ Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIDEELNKKLANKVMYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKF-----DEAEQVWVWEYETEEGAHDLYMDIGEEVRFRVVDESF 157
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. Araport11
Match: AT1G06790.2 (| RNA polymerase Rpb7 N-terminal domain-containing protein | Chr1:2087645-2089039 FORWARD LENGTH=189 | 201606) HSP 1 Score: 206.838 bits (525), Expect = 4.294e-68 Identity = 95/181 (52.49%), Postives = 135/181 (74.59%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKGTWFWDYGEEIDSSFNINYTDKIKFQVQSVSYPPIPVEQPKESKPFAPMLVS 181 MFYLS++EH L +PP LL LP+ +AI + L+ +FLDKV+A+LGLCVS+YDI S+EGG + PGDGA TY V +++FRPF GE+I K SDA+GLRL++ FFDDIY+P +P PNR EP+ N+ + W W+YGE + ++ +IKF+V+S+SYP +P E+ +++KPFAPM+V+ Sbjct: 1 MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSIYDIKSVEGGFVLPGDGAATYKVGLRIVVFRPFVGEVIAAKFKESDANGLRLTLGFFDDIYVPAPLMPKPNRCEPDPYNRKQMIWVWEYGEP-KEDYIVDDACQIKFRVESISYPSVPTERAEDAKPFAPMVVT 180
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. Araport11
Match: AT1G06790.1 (| RNA polymerase Rpb7 N-terminal domain-containing protein | Chr1:2087645-2089287 FORWARD LENGTH=204 | 201606) HSP 1 Score: 206.068 bits (523), Expect = 1.545e-67 Identity = 95/181 (52.49%), Postives = 135/181 (74.59%), Query Frame = 0 Query: 1 MFYLSKIEHKLTLPPSLLALPIGEAIHTELERLFLDKVIANLGLCVSVYDIISMEGGSIFPGDGAPTYLVVFNLIMFRPFPGEIITGKLVSSDADGLRLSIEFFDDIYIPTHHVPNPNRYEPENSNKNKGTWFWDYGEEIDSSFNINYTDKIKFQVQSVSYPPIPVEQPKESKPFAPMLVS 181 MFYLS++EH L +PP LL LP+ +AI + L+ +FLDKV+A+LGLCVS+YDI S+EGG + PGDGA TY V +++FRPF GE+I K SDA+GLRL++ FFDDIY+P +P PNR EP+ N+ + W W+YGE + ++ +IKF+V+S+SYP +P E+ +++KPFAPM+V+ Sbjct: 1 MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSIYDIKSVEGGFVLPGDGAATYKVGLRIVVFRPFVGEVIAAKFKESDANGLRLTLGFFDDIYVPAPLMPKPNRCEPDPYNRKQMIWVWEYGEP-KEDYIVDDACQIKFRVESISYPSVPTERAEDAKPFAPMVVT 180 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 6
BLAST of Vfaba.Tiffany.R1.2g134760.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.2g134760.1_tif_v1 ID=Vfaba.Tiffany.R1.2g134760.1_tif_v1; Name=Vfaba.Tiffany.R1.2g134760.1; organism=Vicia faba; type=mRNA; length=597bpback to top protein sequence of Vfaba.Tiffany.R1.2g134760.1_tif_v1 >Vfaba.Tiffany.R1.2g134760.1_tif_v1 ID=Vfaba.Tiffany.R1.2g134760.1_tif_v1; Name=Vfaba.Tiffany.R1.2g134760.1_tif_v1; organism=Vicia faba; type=polypeptide; length=198bpback to top mRNA from alignment at chr2:1055517232..1055517828- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.2g134760.1_tif_v1 ID=Vfaba.Tiffany.R1.2g134760.1_tif_v1; Name=Vfaba.Tiffany.R1.2g134760.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1055517232..1055517828- (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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