Vfaba.Tiffany.R1.2g153160.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.2g153160.1 vs. UniProtKB/TrEMBL
Match: tr|G7JCD3|G7JCD3_MEDTR (Putative Calmodulin-binding domain, plant OS=Medicago truncatula OX=3880 GN=11442281 PE=4 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 1.390e-91 Identity = 250/553 (45.21%), Postives = 320/553 (57.87%), Query Frame = 0 Query: 1 MATKPKDPNSIMRNKDKKPSSSNTPTTSTTKRLSRPSSSSSVENSTSQNPSEKQIPNYLKPTLSSQPRSQSFRVRNDDNVPNKSLLNRRRSFDKPPSLSKVQKQTQHSPLRQQHKPLGRNIIPSYKPVSERISSKTPKQDVIKKSNSKNVATKSSTKKETKEKNNVAGNGPEPEVKEAITNEENIGEVEKVENIGEHGQVENL---------------------------VPELNQC--------------QSQVQDIVPEINQSQ-------VQNIVPEINESQVQDIAHIHYDNENQGHDQNILQIESHNEKVEEIIPMAVLEEEAKEDQTKDEVKENENGNTNLECNINKSDEQETNHSTNEEEVVEVKEKEQEDIKNEEEFEKEEESSEVMEVKEKNEEEFEKEEESSEVMEVKDKNEEEFEKEEESSEVMEVKEKNEEEFKKEEESSEVMEVKEEKEEEFEKEEESSEVMEVKEENDDEKVENEVEEVSKVNSPKEKEEESSVVQGKKESGQVSNGVIEETASKLLEERRNKVRALAGAFQTVIDHQT 505 MATK KD + +K+KK +SS P +TTKR SRPSS+SSVE ST+ SEKQ+PNYLKPTLSSQPRSQSF++ +DN PNK L+RRRSFDKPPS S++ KQ Q SP R Q K RN PS KP+SER SSKTPKQ KKS+SKN+ATKSST +ET E NV EP+VKEAITN +N GEVE++ENI EH QVE++ +PE+NQ + QV D VPEINQS ++NI + QV+++ I NQ H + EK+E I +E K +Q+ D +G+ LE N N++ +V + Q D +NE+E V+ + EE KE+++ + E N+++ E + + E + E +++E EV+E KE+ E++ K EE E EVK ++EK E E +KV+SPKEKEEES VVQGKKES QVSN VIEETASKL EER+NKVRALAGAFQTVIDHQT Sbjct: 1 MATKTKDS---VGSKEKKSTSSKAPI-ATTKRTSRPSSASSVERSTTL--SEKQVPNYLKPTLSSQPRSQSFKISRNDNAPNKPNLDRRRSFDKPPSPSRLAKQIQQSPSRLQQKSTVRNTFPSSKPISERTSSKTPKQGTTKKSSSKNLATKSSTNEETTETINVVETKTEPKVKEAITNNDNAGEVEEIENIQEHDQVESVHEINQPHDQVVEVEKIENIQERDQVENIPEINQSHQAEEVEKIENIQERDQV-DNVPEINQSHEAGEVEKIENI---LERDQVENVPEI-----NQSHQVGEV------EKIENIQEHDQVENVPKINQSHD------HGDFELEQN-----------QGNDQNIVHI----QSDNENEKE---------VIPIVS---EEVAKEDQNKDEHE---DNQDQNENTDTNQEEGNINESDKKEMNDSTNEGEVIEAKEKVEDQ--KNEEELEKEEVKRATNEEKEE---IEEAKVDSPKEKEEESGVVQGKKESSQVSNDVIEETASKLREERKNKVRALAGAFQTVIDHQT 491
BLAST of Vfaba.Tiffany.R1.2g153160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y8X5|A0A1S2Y8X5_CICAR (probable inactive protein kinase DDB_G0270444 OS=Cicer arietinum OX=3827 GN=LOC101496548 PE=4 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.480e-37 Identity = 153/324 (47.22%), Postives = 188/324 (58.02%), Query Frame = 0 Query: 1 MATKPKDPNSIMRNKDKKPSSSNTPTTSTTKRLSRPSSSSSVENSTSQNPSEKQIPNYLKPTLSSQPRSQSFRV-RNDDNVPNKSLLNRRRSFDKPPSLSKVQKQTQ-HSPLRQQHKPLGRNIIPSYKPVSERISSKTPKQDVIKKSNS----KNVA-TKSSTKKETKEKNNVAGNGPEPEVKEAITNEENIGEVEKVENIGEHGQVENLVPELNQCQSQVQDIVPEINQSQVQNIVPEINESQVQDIAHIHYDNENQGHDQNILQIESHN-EKVEEIIPMAVLEEEAKEDQTKDEVKENENGNTNLECNINKSDEQETNHSTN 316 MATK KD S++ NK+KK +SSN P KR +RPS++SSVE+ST+Q+ SEK +PNYLKPTLSSQPRSQSF++ RND + NK NRRRSFDKP SLS+V KQT SP R QHKPL RN P S+ IS PK V KK+NS KNVA TKS+ +ET E NV N EPEVKEAI NEE + + + +I+P P++ QV ++ H G DQN+ IE H+ EKV+E IP+ VLEEE K+DQTK+E N EC D +E NHSTN Sbjct: 1 MATKTKDSTSVVGNKEKKTTSSNAP-----KRTTRPSTTSSVESSTTQS-SEKHVPNYLKPTLSSQPRSQSFKLPRNDAS--NKPYPNRRRSFDKPQSLSRVPKQTPVASPSRLQHKPLVRN---IIIPSSKSISKINPKGGVKKKTNSSVNTKNVATTKSTNNEETSEAINVVEN--EPEVKEAIINEE----------------------NVEEKVENLAEIIP-----------PQVENDQV-EVEQTH------GQDQNLEHIEYHDSEKVKEEIPI-VLEEEEKQDQTKEE----NITNYKEEC-----DNKEINHSTN 261 HSP 2 Score: 88.5817 bits (218), Expect = 3.304e-15 Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 0 Query: 450 SPKEKEEESSVVQGKKESGQVSNGVIEETASKLLEERRNKVRALAGAFQTVIDHQT 505 S KE E+ES VVQGKKES Q+SN VI+ETASKLLEER+NKVR LAGAFQTVIDHQT Sbjct: 337 SSKEDEDESCVVQGKKES-QISNDVIQETASKLLEERKNKVRQLAGAFQTVIDHQT 391
BLAST of Vfaba.Tiffany.R1.2g153160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6M7F3|A0A2Z6M7F3_TRISU (CaM_binding domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_313350 PE=4 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.194e-16 Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 0 Query: 446 SKVNSPKEK-EEESSVVQGKKESGQVSNGVIEETASKLLEERRNKVRALAGAFQTVIDHQ 504 +KV+S +EK EEESSVVQGKKES QVSN IEETA KL EER+NKVRALAGAFQTVIDHQ Sbjct: 424 TKVDSTEEKQEEESSVVQGKKESSQVSNDQIEETARKLREERKNKVRALAGAFQTVIDHQ 483
BLAST of Vfaba.Tiffany.R1.2g153160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NB07|A0A2K3NB07_TRIPR (CaM_binding domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g023498 PE=4 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.413e-15 Identity = 169/550 (30.73%), Postives = 260/550 (47.27%), Query Frame = 0 Query: 1 MATKPKDPNSIMRNKDKKPSSSNTPTTSTTKRLSRPSSSSSVEN-------------STSQNPSEKQIPNYLKPTLS-SQPRSQSFRVRNDDNVPNKSLLNRRRSFDKPPSLSKVQKQTQHSPLRQQHK----PLGRNIIPSYKPVSERISSKTPKQDVIKKSNSK------NVATKSSTKKETKEKNNVAGNGPEPEVKEAITNEENIGEVEKVENIGEHGQVENLVPELNQCQSQVQDIVPEINQSQVQNIVPEINESQVQDIAH--IHYDNE---NQGHDQNILQIESHNEKVEEIIPMAV------LEEEAKEDQTKDEVKENENGNTNLECNINKSDEQET----------NHSTNEEEVVEVKEKEQEDIKNEEEFEKEEESSEVMEVKEKNEEEFEKEEESSEVMEVKDKNEEEFEKEEESSEVMEVKEKNEEEFKKEEESSEVMEVKEEKEEEFEKEEESSEVMEVKEENDDEKVENEV-EEVSKVNSPKEKEEESSVVQGKKESGQVSNGVIEETASKLLEERRNKVRALAGAFQTVIDHQ 504 MATKPKD ++++ N+ KK SSN+P T T KR ++PS++++ S S PSEK KPT S +P+++S P K RRRS DKP S S + +T + HK P R KP+S++ S + V K++ K N+AT ++TKK + + A P + + + + V+ V+ V E+ +++V + + + S+V I P++N+ V + H + D++ NQG D+ ++ + EEI +E E K+ +++ E ++ E N+ +E E+ N+S N + V+ E E+E NE KEE S + V E + E E++ E K N E ++E + SEV N++E E ES V+E +K+ E EE E + E VE EV EEV + + + ++ +GK ES QVSN +IEETA+KLL R+NKV ALAGAFQTVIDHQ Sbjct: 1 MATKPKDSSTVVGNEKKKTPSSNSPLT-TAKRTTKPSTTAAAAAATTTTRTTPTTNKSNSTTPSEKN-----KPTTSIRKPKTES---------PIKPSPIRRRSLDKPLSSSNLTVKTTQPSTSRLHKALVSPGTRESTNPLKPISDKTPSDAKTKLVWKRATKKINTPNNNIATSNTTKKVANDHTSSAN----PAKTKTVITDSDSSNVKTVD-----------VKEVTNQEAEVIKVESKEHASKV--ISPDVNKEFVHEHEHDKVLKDSDQPQNQGDDEKVISTVT-----EEIAEKEPQEEKPEVEHEVKQTNSENHPGEVDHSEIEREVAANEKEENESGVVIEDQKSENNSENHRKEVDHSEVEREAAVNE----KEENKSGI--VLEDQKSENNNEDKPQVEHEQKQNNSENHQEEVDHSEVEREAAANDKE---ENESGIVIE---DKKSENNNEERGGE--------EKEAVEGEVSEEVKEAKAEVAQPKQQLAAKGKHES-QVSNDMIEETATKLL-GRKNKVLALAGAFQTVIDHQ 491
BLAST of Vfaba.Tiffany.R1.2g153160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151TZ71|A0A151TZ71_CAJCA (CaM_binding domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_004928 PE=4 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.556e-12 Identity = 123/371 (33.15%), Postives = 175/371 (47.17%), Query Frame = 0 Query: 1 MATKPKDPNSIMRNKDKKPSSSNTPTTSTTKRLSRPSSSSSVENSTSQNPSEKQIPNYLKPTLSSQPRSQSFRVRNDDNVPNKSLLNRRRSFDKPPSLSKVQKQTQHS------------------PLRQQHKPLGRNIIPSYKPVSERISSKTP-----KQDVIK-----------------KSNSKNVATKSSTK--KETKEKNNVAGNGPEPEVKEAITNEENIGEVEKVENIGEHGQVENLVPELNQCQSQVQDIVPEINQSQVQNIVPEINESQVQDIAHI-HYDN----ENQGHDQNILQIESHNEKVEEIIPMAVLEEEAKEDQTK---DEVKENENGNTNLECNINKSDEQETNHSTNEEEVV 321 MATK K N + K+KK SSN+ T TTKR+ +PS++++ N + S+K IPNYLKPTL+SQ S S + D+ NK LN+RRS DKP S S + KQ Q S P R + RN PS KP+S+ +SK P + VIK KSN+ +V+ S+ K KE K+ NV +VKE T E VE I +VEN +++Q + V DI P ++ DI H+ DN +NQ D+ I+ I S E++E LEE+AK+ + + D++ ++E NI++SD Q + +T E VV Sbjct: 1 MATKAKGSNFV--GKEKKGPSSNSHIT-TTKRIIKPSTTTNSTNKPNSTSSKKNIPNYLKPTLTSQLDSPSSKQIKSDSPNNKPSLNKRRSLDKPLSSSTLTKQIQPSNSTLHDALVSTGSRERSTPRRSSIGLVTRNTNPS-KPISD-TTSKIPSIRKTRPLVIKSTKKISLTTTTTLSAKKKSNTDHVSVNSTNKSAKEIKKTLNVETE----QVKEVATQE--------VEVI----KVENKERKVHQAE-HVTDISPNVDSE--------------HDIEHVLGVDNSDPFQNQVDDERIISIVSEAEEIEN----GPLEEKAKDYEHELEDDKINQDEG------RNISESDHQHKHFTTKEGFVV 325
BLAST of Vfaba.Tiffany.R1.2g153160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371DZL4|A0A371DZL4_MUCPR (CaM_binding domain-containing protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_62733 PE=4 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.381e-12 Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 0 Query: 435 DEKVENEVEEVS-KVNSPKEKEEESSVVQGKKES-GQVSNGVIEETASKLLEERRNKVRALAGAFQTVIDHQTT 506 DE+V++EV+EV ++ PK+ + S VV GKKES ++SN VIEETA KL+E R+NKVRALAGAFQ VIDHQ T Sbjct: 477 DEQVKSEVKEVKVELTEPKQVQT-SGVVHGKKESHSRISNDVIEETADKLMEARKNKVRALAGAFQNVIDHQKT 549
BLAST of Vfaba.Tiffany.R1.2g153160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7G7W0|A0A1J7G7W0_LUPAN (CaM_binding domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_07923 PE=4 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 3.756e-12 Identity = 78/184 (42.39%), Postives = 104/184 (56.52%), Query Frame = 0 Query: 1 MATKPKDPNSIMRNKDKKPSSSNTP----TTSTTKRLSRPSSSSSVENSTSQNPSEKQIPNYLKPTLSSQP-RSQSFRVRNDDNVPNKSLLNRRRSFDKPPSLSKVQKQTQHS-PLRQQHK------PLGRNI-IP-----SYKPVSERISSKTPKQD------VIKKSNSKNVATKSSTKKET 160 MATK K+ S + K+KK SSSN+P +T +R +S +TS +EKQ+PNYLKPT+SS+ S SF++ D V NK LNRRRSFDKPPS S++ KQT S P +QHK P R++ +P S KP+ +RI SKTPK+ + KS+ K+ ST T Sbjct: 1 MATKAKE--SSVVGKEKKASSSNSPITTTKKTTKPTTTRTTSPKDKTTTTSNPTTEKQVPNYLKPTISSRLVESNSFKLTRSD-VSNKPSLNRRRSFDKPPSPSRLPKQTHPSPPFSRQHKALVSPGPRERSLSLPLKGTNSSKPIPQRI-SKTPKEGKTNQPALFAKSDKKSRGPSPSTSTTT 180 HSP 2 Score: 77.7962 bits (190), Expect = 1.600e-11 Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 0 Query: 460 VVQGKKESGQVSNGVIEETASKLLEERRNKVRALAGAFQTVIDHQT 505 V GKKE+ QVSN VIEETASKLLEER+NKVRALAGAFQTVID+QT Sbjct: 405 VQHGKKEA-QVSNDVIEETASKLLEERKNKVRALAGAFQTVIDYQT 449
BLAST of Vfaba.Tiffany.R1.2g153160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P6G8J0|A0A6P6G8J0_ZIZJJ (DNA topoisomerase 1-like OS=Ziziphus jujuba OX=326968 GN=LOC112491969 PE=4 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.133e-11 Identity = 64/150 (42.67%), Postives = 87/150 (58.00%), Query Frame = 0 Query: 1 MATKPKDPNSIMRNKDKKPSSSN--TPTTSTTKRLSRPSSSSSVENSTSQNPSEKQIPNYLKPTLSSQPRSQSFRV---RNDDNVPN-KSLLNRRRSFDKPPSLSKVQKQTQHSPLRQQHKPLGRN------IIPSYKPVSERISSKTPK 138 MATKPK+ +S+ + K PSSS TPT S TK SS+ +STS EK +PNYLKPT+SS+ ++F+ D+ PN K+ LNRRRSFDKPPS S+VQ SP ++ + GR+ S KP+S+ ++PK Sbjct: 1 MATKPKESSSVGKEKKVPPSSSTHTTPTRSGTKLSPNSSSTPKPSSSTST---EKPLPNYLKPTISSR-HDEAFKPIKKHGSDHDPNHKATLNRRRSFDKPPSSSRVQSALV-SPGPKERRTAGRSSSFSCKTTTSSKPISDNKPLRSPK 145
BLAST of Vfaba.Tiffany.R1.2g153160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P6G8H0|A0A6P6G8H0_ZIZJJ (LOW QUALITY PROTEIN: DNA topoisomerase 1 OS=Ziziphus jujuba OX=326968 GN=LOC107420776 PE=4 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.158e-11 Identity = 64/150 (42.67%), Postives = 87/150 (58.00%), Query Frame = 0 Query: 1 MATKPKDPNSIMRNKDKKPSSSN--TPTTSTTKRLSRPSSSSSVENSTSQNPSEKQIPNYLKPTLSSQPRSQSFRV---RNDDNVPN-KSLLNRRRSFDKPPSLSKVQKQTQHSPLRQQHKPLGRN------IIPSYKPVSERISSKTPK 138 MATKPK+ +S+ + K PSSS TPT S TK SS+ +STS EK +PNYLKPT+SS+ ++F+ D+ PN K+ LNRRRSFDKPPS S+VQ SP ++ + GR+ S KP+S+ ++PK Sbjct: 1 MATKPKESSSVGKEKKVPPSSSTHTTPTRSGTKLSPNSSSTPKPSSSTST---EKPLPNYLKPTISSR-HDEAFKPIKKHGSDHDPNHKATLNRRRSFDKPPSSSRVQSALV-SPGPKERRTAGRSSSFSCKTTTSSKPISDNKPLRSPK 145
BLAST of Vfaba.Tiffany.R1.2g153160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4N742|A0A6A4N742_LUPAL (Putative Calmodulin-binding domain, plant OS=Lupinus albus OX=3870 GN=Lal_00004781 PE=4 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.326e-11 Identity = 38/46 (82.61%), Postives = 39/46 (84.78%), Query Frame = 0 Query: 460 VVQGKKESGQVSNGVIEETASKLLEERRNKVRALAGAFQTVIDHQT 505 V G KE QVSN VIEETASKLLE R+NKVRALAGAFQTVIDHQT Sbjct: 404 VEHGMKEESQVSNDVIEETASKLLEARKNKVRALAGAFQTVIDHQT 449 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.2g153160.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.2g153160.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Tiffany.R1.2g153160.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 0
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.2g153160.1_tif_v1 ID=Vfaba.Tiffany.R1.2g153160.1_tif_v1; Name=Vfaba.Tiffany.R1.2g153160.1; organism=Vicia faba; type=mRNA; length=1524bpback to top protein sequence of Vfaba.Tiffany.R1.2g153160.1_tif_v1 >Vfaba.Tiffany.R1.2g153160.1_tif_v1 ID=Vfaba.Tiffany.R1.2g153160.1_tif_v1; Name=Vfaba.Tiffany.R1.2g153160.1_tif_v1; organism=Vicia faba; type=polypeptide; length=507bpback to top mRNA from alignment at chr2:1204962008..1204963531+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.2g153160.1_tif_v1 ID=Vfaba.Tiffany.R1.2g153160.1_tif_v1; Name=Vfaba.Tiffany.R1.2g153160.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1204962008..1204963531+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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