Vfaba.Tiffany.R1.2g157920.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.2g157920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y450|A0A1S2Y450_CICAR (uncharacterized protein LOC101504376 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101504376 PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.876e-54 Identity = 90/101 (89.11%), Postives = 93/101 (92.08%), Query Frame = 0 Query: 12 GHYFDGGGFMSASPFSAAVNASSVGFTNSSGGNGGVLPARTDPCMARSVSVHGCSQMQGQSSVPAREEKFDSFKDAGTNVSPAVSRRDMATQMSPEGSSCS 112 G +FDGG FM ASPFSAAVN S+ GFTNSSGGNGGVLP R DPCMARSVSVHGCSQMQGQSS+PAREEKFD FKDAGTNVSPAVSRRDMATQMSPEGSSCS Sbjct: 332 GPFFDGGNFMGASPFSAAVNVSADGFTNSSGGNGGVLPTRMDPCMARSVSVHGCSQMQGQSSIPAREEKFDGFKDAGTNVSPAVSRRDMATQMSPEGSSCS 432
BLAST of Vfaba.Tiffany.R1.2g157920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6PAG3|A0A2Z6PAG3_TRISU (Remorin_C domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_05090 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.309e-47 Identity = 90/102 (88.24%), Postives = 95/102 (93.14%), Query Frame = 0 Query: 12 GHYFDGGGFMSASPFSAAVNASSVGFTNSSGGNGG-VLPARTDPCMARSVSVHGCSQMQGQSSVPAREEKFDSFKDAGTNVSPAVSRRDMATQMSPEGSSCS 112 GH+FDGG FM+ASPFSAAVNAS+ GFTNSSGGNGG LP RTDPCMARSVSVHGCSQ QGQSS+P REEKFD+FKDAGTNVSPAVSRRDMATQMSPEGSSCS Sbjct: 305 GHFFDGGSFMTASPFSAAVNASADGFTNSSGGNGGGALPTRTDPCMARSVSVHGCSQTQGQSSIPTREEKFDAFKDAGTNVSPAVSRRDMATQMSPEGSSCS 406
BLAST of Vfaba.Tiffany.R1.2g157920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072VDZ7|A0A072VDZ7_MEDTR (Carboxy-terminal region remorin OS=Medicago truncatula OX=3880 GN=11428035 PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 7.354e-47 Identity = 91/103 (88.35%), Postives = 97/103 (94.17%), Query Frame = 0 Query: 12 GHYFDGGGFMSA-SPFSAAVNASSVGFTNSSGGNGGV-LPARTDPCMARSVSVHGCSQMQGQSSVPAREEKFDSFKDAGTNVSPAVSRRDMATQMSPEGSSCS 112 GH+FDGG FM+A SPFSAAVNAS+ GFTNSSGGNGG LP RTDPCMARSVSVHGCSQMQGQSS+P+REEKFD+FKDAGTNVSPAVSRRDMATQMSPEGSSCS Sbjct: 274 GHFFDGGNFMTAASPFSAAVNASADGFTNSSGGNGGGGLPTRTDPCMARSVSVHGCSQMQGQSSIPSREEKFDAFKDAGTNVSPAVSRRDMATQMSPEGSSCS 376
BLAST of Vfaba.Tiffany.R1.2g157920.1 vs. UniProtKB/TrEMBL
Match: tr|G7I3I9|G7I3I9_MEDTR (Carboxy-terminal region remorin OS=Medicago truncatula OX=3880 GN=11428035 PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 2.213e-46 Identity = 91/103 (88.35%), Postives = 97/103 (94.17%), Query Frame = 0 Query: 12 GHYFDGGGFMSA-SPFSAAVNASSVGFTNSSGGNGGV-LPARTDPCMARSVSVHGCSQMQGQSSVPAREEKFDSFKDAGTNVSPAVSRRDMATQMSPEGSSCS 112 GH+FDGG FM+A SPFSAAVNAS+ GFTNSSGGNGG LP RTDPCMARSVSVHGCSQMQGQSS+P+REEKFD+FKDAGTNVSPAVSRRDMATQMSPEGSSCS Sbjct: 336 GHFFDGGNFMTAASPFSAAVNASADGFTNSSGGNGGGGLPTRTDPCMARSVSVHGCSQMQGQSSIPSREEKFDAFKDAGTNVSPAVSRRDMATQMSPEGSSCS 438
BLAST of Vfaba.Tiffany.R1.2g157920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3E4W0|A0A1S3E4W0_CICAR (uncharacterized protein LOC101504376 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101504376 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.114e-46 Identity = 83/101 (82.18%), Postives = 85/101 (84.16%), Query Frame = 0 Query: 12 GHYFDGGGFMSASPFSAAVNASSVGFTNSSGGNGGVLPARTDPCMARSVSVHGCSQMQGQSSVPAREEKFDSFKDAGTNVSPAVSRRDMATQMSPEGSSCS 112 G +FDGG FM ASPFSAAVN S+ GFTNSSGGNGGVLP R DPCMARSVSVHGCSQMQ EEKFD FKDAGTNVSPAVSRRDMATQMSPEGSSCS Sbjct: 332 GPFFDGGNFMGASPFSAAVNVSADGFTNSSGGNGGVLPTRMDPCMARSVSVHGCSQMQ--------EEKFDGFKDAGTNVSPAVSRRDMATQMSPEGSSCS 424
BLAST of Vfaba.Tiffany.R1.2g157920.1 vs. UniProtKB/TrEMBL
Match: tr|V7CTZ3|V7CTZ3_PHAVU (Remorin_C domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G022700g PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.149e-37 Identity = 79/104 (75.96%), Postives = 86/104 (82.69%), Query Frame = 0 Query: 14 YFDGGG---FMSASPFSAAVNASSV--GFTNSSGGNGGVLPARTDPCMARSVSVHGCSQMQGQSSVPAREEKFDSFKDAGTNVSPAVSRRDMATQMSPEGSSCS 112 FDGG FMSASPFSAAV+ S+ G SSGG+ G +P RTDPCMARSVSVHGCSQMQ QSS+PA+ EKFD FKDAGTNVSPA+SRRDMATQMSPEGSSCS Sbjct: 328 LFDGGNSGSFMSASPFSAAVSVSAAADGLMASSGGSCGAVPTRTDPCMARSVSVHGCSQMQSQSSLPAQGEKFDGFKDAGTNVSPAISRRDMATQMSPEGSSCS 431
BLAST of Vfaba.Tiffany.R1.2g157920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MET2|A0A4D6MET2_VIGUN (Remorin OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g249 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.509e-37 Identity = 78/104 (75.00%), Postives = 86/104 (82.69%), Query Frame = 0 Query: 14 YFDGGG---FMSASPFSAAVNASSV--GFTNSSGGNGGVLPARTDPCMARSVSVHGCSQMQGQSSVPAREEKFDSFKDAGTNVSPAVSRRDMATQMSPEGSSCS 112 FDGG FM+ASPFSAAV+ S+ G SSGG+ G +P RTDPCMARSVSVHGCSQMQ QSS+PA+ EKFD FKDAGTNVSPA+SRRDMATQMSPEGSSCS Sbjct: 328 LFDGGNSGSFMTASPFSAAVSVSAAADGLMASSGGSCGAVPTRTDPCMARSVSVHGCSQMQSQSSLPAQGEKFDGFKDAGTNVSPAISRRDMATQMSPEGSSCS 431
BLAST of Vfaba.Tiffany.R1.2g157920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371GSV3|A0A371GSV3_MUCPR (Remorin 4.1 (Fragment) OS=Mucuna pruriens OX=157652 GN=REM4.1 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.974e-37 Identity = 79/104 (75.96%), Postives = 86/104 (82.69%), Query Frame = 0 Query: 14 YFDGGG---FMSASPFSAAVNASSV--GFTNSSGGNGGVLPARTDPCMARSVSVHGCSQMQGQSSVPAREEKFDSFKDAGTNVSPAVSRRDMATQMSPEGSSCS 112 F+GG FM+ASPFSAAV+ S+ G T SGG+ GV P RTDPCMARSVSVHGCSQMQ QSS+PA+ EKFD FKDAGTNVSPAVSRRDMATQMSPEGSSCS Sbjct: 336 LFEGGNSGSFMAASPFSAAVSVSAAADGLTAGSGGSCGVPPTRTDPCMARSVSVHGCSQMQSQSSLPAQGEKFDGFKDAGTNVSPAVSRRDMATQMSPEGSSCS 439
BLAST of Vfaba.Tiffany.R1.2g157920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7IAP4|A0A1J7IAP4_LUPAN (Remorin_C domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_08226 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.803e-36 Identity = 72/104 (69.23%), Postives = 80/104 (76.92%), Query Frame = 0 Query: 12 GHYFDGGG---FMSASPFSAAVNASSVGFTNSSGGNGGVLPARTDPCMARSVSVHGCSQMQGQSSVPAREEKFDSFKDAGTNVSPAVSRRDMATQMSPEGSSCS 112 G F+GG FM+ASPFSA V S+ G T S G G VLP R DPCM+RSVS HGCS M QSS+PA++EKFD FKDA TNVSPAVSRRDMATQMSP+GSSCS Sbjct: 270 GPLFEGGNAGNFMAASPFSAGV-ISADGLTVGSSGRGRVLPMRADPCMSRSVSAHGCSDMHSQSSMPAQDEKFDDFKDADTNVSPAVSRRDMATQMSPDGSSCS 372
BLAST of Vfaba.Tiffany.R1.2g157920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5NGF7|A0A6A5NGF7_LUPAL (Remorin_C domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00046072 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 7.592e-36 Identity = 73/104 (70.19%), Postives = 83/104 (79.81%), Query Frame = 0 Query: 12 GHYFDGGG---FMSASPFSAAVNASSVGFTNSSGGNGGVLPARTDPCMARSVSVHGCSQMQGQSSVPAREEKFDSFKDAGTNVSPAVSRRDMATQMSPEGSSCS 112 G F+GG FM AS FSA V ++ G + SGG+GGV+P RTDPCMARSVSVHGCS MQ QSS+PA+E+KFD FKDAGTNVS AVS +DMATQMSPEGSSCS Sbjct: 280 GPMFEGGNAGNFMEASTFSAGV-ITADGLSIGSGGHGGVVPMRTDPCMARSVSVHGCSAMQSQSSMPAQEQKFDGFKDAGTNVSAAVSMKDMATQMSPEGSSCS 382
BLAST of Vfaba.Tiffany.R1.2g157920.1 vs. Araport11
Match: AT1G45207.3 (| Remorin family protein | Chr1:17130703-17133548 REVERSE LENGTH=549 | 201606) HSP 1 Score: 82.0333 bits (201), Expect = 2.722e-19 Identity = 48/92 (52.17%), Postives = 59/92 (64.13%), Query Frame = 0 Query: 18 GGFMSASPFSAAVNASSVGFTNSSGGNGGVLPARTDPCMARSVSVHGCSQMQGQSSVPAREEKFDSFKDAGTNVSPAVSRRDMATQMSPEGS 109 GG ++SPFSA V +V +S G P R DP MARSVS+HGCS+ SS +++ +S KDA T+ AVSRRDMATQMSPEGS Sbjct: 292 GGLTASSPFSAGVLPETV---SSRGSTTAAFPQRIDPSMARSVSIHGCSETLASSS---QDDIHESMKDAATDAQ-AVSRRDMATQMSPEGS 376
BLAST of Vfaba.Tiffany.R1.2g157920.1 vs. Araport11
Match: AT1G45207.2 (| Remorin family protein | Chr1:17130703-17133548 REVERSE LENGTH=555 | 201606) HSP 1 Score: 82.0333 bits (201), Expect = 2.893e-19 Identity = 48/92 (52.17%), Postives = 59/92 (64.13%), Query Frame = 0 Query: 18 GGFMSASPFSAAVNASSVGFTNSSGGNGGVLPARTDPCMARSVSVHGCSQMQGQSSVPAREEKFDSFKDAGTNVSPAVSRRDMATQMSPEGS 109 GG ++SPFSA V +V +S G P R DP MARSVS+HGCS+ SS +++ +S KDA T+ AVSRRDMATQMSPEGS Sbjct: 293 GGLTASSPFSAGVLPETV---SSRGSTTAAFPQRIDPSMARSVSIHGCSETLASSS---QDDIHESMKDAATDAQ-AVSRRDMATQMSPEGS 377 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.2g157920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.2g157920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Tiffany.R1.2g157920.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.2g157920.1_tif_v1 ID=Vfaba.Tiffany.R1.2g157920.1_tif_v1; Name=Vfaba.Tiffany.R1.2g157920.1; organism=Vicia faba; type=mRNA; length=342bpback to top protein sequence of Vfaba.Tiffany.R1.2g157920.1_tif_v1 >Vfaba.Tiffany.R1.2g157920.1_tif_v1 ID=Vfaba.Tiffany.R1.2g157920.1_tif_v1; Name=Vfaba.Tiffany.R1.2g157920.1_tif_v1; organism=Vicia faba; type=polypeptide; length=113bpback to top mRNA from alignment at chr2:1248834684..1248835992- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.2g157920.1_tif_v1 ID=Vfaba.Tiffany.R1.2g157920.1_tif_v1; Name=Vfaba.Tiffany.R1.2g157920.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1248834684..1248835992- (Vicia fababack to top |