Vfaba.Tiffany.R1.3g040320.1

Transcript Overview
NameVfaba.Tiffany.R1.3g040320.1
Unique NameVfaba.Tiffany.R1.3g040320.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length1599
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr3chromosomechr3:274988718..274991816 -Vicia faba cv. Tiffany genome v1.0n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g040320Vfaba.Tiffany.R1.3g040320_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g040320.1_tif_v1-exonVfaba.Tiffany.R1.3g040320.1_tif_v1-exon-chr3_tif_v1:274988718..274988726Vicia fabaexon
Vfaba.Tiffany.R1.3g040320.1_tif_v1-exonVfaba.Tiffany.R1.3g040320.1_tif_v1-exon-chr3_tif_v1:274989370..274989521Vicia fabaexon
Vfaba.Tiffany.R1.3g040320.1_tif_v1-exonVfaba.Tiffany.R1.3g040320.1_tif_v1-exon-chr3_tif_v1:274990308..274991512Vicia fabaexon
Vfaba.Tiffany.R1.3g040320.1_tif_v1-exonVfaba.Tiffany.R1.3g040320.1_tif_v1-exon-chr3_tif_v1:274991584..274991816Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g040320.1_tif_v1-cdsVfaba.Tiffany.R1.3g040320.1_tif_v1-cds-chr3_tif_v1:274988718..274988726Vicia fabaCDS
Vfaba.Tiffany.R1.3g040320.1_tif_v1-cdsVfaba.Tiffany.R1.3g040320.1_tif_v1-cds-chr3_tif_v1:274989370..274989521Vicia fabaCDS
Vfaba.Tiffany.R1.3g040320.1_tif_v1-cdsVfaba.Tiffany.R1.3g040320.1_tif_v1-cds-chr3_tif_v1:274990308..274991512Vicia fabaCDS
Vfaba.Tiffany.R1.3g040320.1_tif_v1-cdsVfaba.Tiffany.R1.3g040320.1_tif_v1-cds-chr3_tif_v1:274991584..274991816Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g040320.1_tif_v1Vfaba.Tiffany.R1.3g040320.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.3g040320.1_tif_v1Vfaba.Tiffany.R1.3g040320.1_tif_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MW90|A0A2K3MW90_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Trifolium pratense OX=57577 GN=L195_g018260 PE=4 SV=1)

HSP 1 Score: 727.243 bits (1876), Expect = 0.000e+0
Identity = 401/604 (66.39%), Postives = 437/604 (72.35%), Query Frame = 0
Query:    1 MEKTDIFKPITTTLTGP-NYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTTITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRV-----------------GRLFELQSLHLPKDHISA-ATINSPIHQWHLRLGHASASKIQPLIS--RGLLGSIKVEPFD----CLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELVPNV------ELNTRPPS------------------PAPTEPVSDVDIVSASRHSTRM 531
            MEK+DIFKPITTTLTG  NY+LW QGMKSFLIGRKLWRIVTGD+VK TQ+KDESA KFA+RLEDWDSKNHQIITWLRNT                        RYQTTGL HYYQLWTTLHNTKQE GQSVNDFLAQVQPIWHQ+SLAKISEDHLHLIQVLMALRPEYEAVRASLLH+NPLPSLDTAIQEIIFEETR NLDKTPQMD  LAT R SHQKSNH PCKNCNR+GH+FANCPTIECRY HGIGHILEHCPTRPPKQNRGFTKSKNV  SGSSSIS   TEGST ITMSDIEALIKQVMSSN ST+M ATHGNSRWFFDS CSNHMTTDIKSLP+ATLVSSLPPIHTASGNTMNITHTGHVST NLTLPDTYYIPNLKLNLISIG+LCEQGLNV FS SGVQVQDPQTK IIGTGRR+                    F +  L  P   +     I + + Q+ L    +S  ++Q      + L+  +  + ++    C+   +  Q          S  + ++++  P     P EL P+       ELNT PPS                  PAPTE V DVD V ASRHSTR+
Sbjct:    1 MEKSDIFKPITTTLTGSSNYDLWAQGMKSFLIGRKLWRIVTGDIVKPTQEKDESATKFAERLEDWDSKNHQIITWLRNTSVPSIHIQFNNYDTAKAIWDFLKNRYQTTGLAHYYQLWTTLHNTKQEHGQSVNDFLAQVQPIWHQMSLAKISEDHLHLIQVLMALRPEYEAVRASLLHRNPLPSLDTAIQEIIFEETRLNLDKTPQMDVALAT-RFSHQKSNH-PCKNCNRSGHVFANCPTIECRYCHGIGHILEHCPTRPPKQNRGFTKSKNVPKSGSSSISAAATEGSTAITMSDIEALIKQVMSSNTSTAMSATHGNSRWFFDSACSNHMTTDIKSLPSATLVSSLPPIHTASGNTMNITHTGHVSTSNLTLPDTYYIPNLKLNLISIGQLCEQGLNVNFSLSGVQVQDPQTKQIIGTGRRIMQWNIVNPPCFSFSVSKALWFNVHVLTPPNKMVGQNENIVTSLTQFVL---FSSQPRVQKDFGGKQLLMFLMSAQNYNRVLACVAFLVMAQNTKDIAVGIQSPTDYASHVMLPF-GKTPFELFPSSNADNSNELNTCPPSXTPTELVPDVELNTRPSAPAPTESVPDVDTVPASRHSTRV 598          
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PHL1|A0A2K3PHL1_TRIPR (Glutamate receptor-like protein OS=Trifolium pratense OX=57577 GN=L195_g011459 PE=4 SV=1)

HSP 1 Score: 571.237 bits (1471), Expect = 0.000e+0
Identity = 323/558 (57.89%), Postives = 360/558 (64.52%), Query Frame = 0
Query:    1 MEKTDIFKPITTTLTG-PNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNTRYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTTITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRV---GRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSIKVEPFD----CLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPN----------------ELVPNV---ELNTRPPSPAPTEPVSDVDIVSASRHSTRM 531
            MEKT+I KPITTTL G P+YN+WVQGMKSFLIGRKLWRIVT DV+K T++K+ES  KFA RLE+WDSKNHQIITWLRNT            LWTTL NTK  PGQSVNDFLAQVQPIWHQIS AKISEDHLHLIQ LMALRPEYEAVRASLLH+NPLPSLDTAIQEIIFEET+                                       NCP                   +PPKQN GF KSKNV  SGSSSIST  T+GST ITMSDIEALIKQVMSSN S  M ATHGNSRWFFDS C NH TTDIKSLP+ TLVSSLPPIHTA GNTMNITHTGHVST NLTLPDTYY+PNL LNLIS+G+LCEQGLNVYFSPSGVQVQDPQTK IIGTGRRV      F +  L  P   +    +N  I      L        QP + +   G +  + ++    C++  +             S    ++++  P      +                 L+P +   +LNTRPPSPAPTEPVSDVDIV ASRHSTR+
Sbjct:    1 MEKTEIVKPITTTLIGQPSYNIWVQGMKSFLIGRKLWRIVTRDVIKPTREKNESDTKFAKRLEEWDSKNHQIITWLRNT-----------SLWTTLLNTKLLPGQSVNDFLAQVQPIWHQISFAKISEDHLHLIQFLMALRPEYEAVRASLLHRNPLPSLDTAIQEIIFEETQ---------------------------------------NCP------------------RQPPKQNCGFNKSKNVPKSGSSSISTAATKGSTAITMSDIEALIKQVMSSNTSIVMSATHGNSRWFFDSACCNHTTTDIKSLPSVTLVSSLPPIHTAIGNTMNITHTGHVSTSNLTLPDTYYLPNLTLNLISVGQLCEQGLNVYFSPSGVQVQDPQTKQIIGTGRRVVSKALRFNVHVLTPPNKMVR---LNENIVT---SLTQIVLFSYQPRVQKSFGGLMSAQNYNRVLTCVYFLVMAHNTKDIVVGIQSPTYYASHVMLPFGKTPCSPLFLHFIILLALTHFISLIPQLSCFQLNTRPPSPAPTEPVSDVDIVPASRHSTRV 484          
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6N2LVZ3|A0A6N2LVZ3_SALVM (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS271979 PE=4 SV=1)

HSP 1 Score: 533.102 bits (1372), Expect = 0.000e+0
Identity = 267/401 (66.58%), Postives = 306/401 (76.31%), Query Frame = 0
Query:    1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLT-SGSSSISTTTTEGSTTITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVY 376
            MEK+ I +PI T L+G NYNLW+QGMKSFLIGRKLWRIVTGD+ K T+++DE+  KFADRLEDWDSKNHQIITW RNT                        RYQTTGL HYYQLWTTLH+ KQ  GQSVNDFLAQVQPIW+Q+S AKISEDHLHLIQVLMALRPEYE+VRASLLH+NPLPSL+TAIQEIIFEETR NLDK PQ D  LATTR SHQK  +  CKNC++ GH+FA CPTIECRY H +GHILEHCPTRPP+   GF+KSKN+   S SS+     T GST +TMSD+E ++KQV+SSN ST+M AT GNS WFFDS C NHMT DI  L   T  +SLP IHTA+G TM ITHTGHV+T NL++ DTY+IPNL LNLIS+G     G + +
Sbjct:    1 MEKSGISQPIATVLSGSNYNLWIQGMKSFLIGRKLWRIVTGDITKPTKEQDETDTKFADRLEDWDSKNHQIITWFRNTSVPAIHIQFADYDSAKEVWDFLATRYQTTGLAHYYQLWTTLHSLKQGSGQSVNDFLAQVQPIWNQLSQAKISEDHLHLIQVLMALRPEYESVRASLLHRNPLPSLNTAIQEIIFEETRLNLDKPPQFDIALATTRSSHQKFGNQTCKNCHQMGHVFATCPTIECRYCHVLGHILEHCPTRPPRSKGGFSKSKNMFKPSSSSATVAAATPGSTFVTMSDLEEMVKQVISSNPSTAMSATPGNSPWFFDSACCNHMTPDIDLLSDKTNATSLPLIHTANGTTMPITHTGHVTTSNLSMDDTYHIPNLTLNLISVGTGLTNGTDSW 401          
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5D3CT53|A0A5D3CT53_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G00560 PE=4 SV=1)

HSP 1 Score: 516.153 bits (1328), Expect = 1.405e-170
Identity = 270/525 (51.43%), Postives = 347/525 (66.10%), Query Frame = 0
Query:    1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTT--ITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSI-KVEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELV 498
            MEK++I +PI+T L G NY  W   MKSFLIGRKLWRIVT D+ K T+   E  +KF +RLE+WDSKNHQIITWL NT                        R+++ GL HYYQL  +L N  QE GQSVN++LA +QPIW Q+  A IS+DHL LI+VLM LRPEYE+VRA+LLH++PLPSLD AIQEI+FEE R  ++ +   D  LA+T      S+   CKNC  TGH F NCP IECRY H  GHIL++CP +PPK     T++KN     +SS +T   + STT    +SD+++L+ Q++SS  S+++  + GN RW  DS C NHMT+D   +   +   SLPPI+ A GN MNITH G ++T +L LP TY +PNL  NL+S+G+LC+ GL V FS +G QVQDPQT   IGTGR+VGRLFEL SL +P   ISA   +S  +QWHLRLGHAS  K++ LIS   L SI K  PF+CL+CKLAKQP +SF++S S  D   + +++ +  PAP   V
Sbjct:    1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTRDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFDNAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDVVLASTYSPPGASSTF-CKNCKLTGHKFINCPKIECRYCHKSGHILDNCPIKPPKPRNYSTRAKNFTKPNNSSAATVAPDNSTTPQFQISDLQSLLNQLISSP-SSALAVSPGN-RWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGLTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSKSTSICDKPFDLIHSDIWGPAPTTTV 522          
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5A7UGZ4|A0A5A7UGZ4_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G002020 PE=4 SV=1)

HSP 1 Score: 511.531 bits (1316), Expect = 7.980e-169
Identity = 268/525 (51.05%), Postives = 346/525 (65.90%), Query Frame = 0
Query:    1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTT--ITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSI-KVEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELV 498
            MEK++I +PI+T L G NY  W   MKSFLIGRKLWRIVT D+ K T+   E  +KF +RLE+WDSKNHQIITWL NT                        R+++ GL HYYQL  +L N  QE GQSVN++LA +QPIW Q+  A IS+DHL LI+VLM LRPEYE+V+A+LLH++PLPSLD AIQEI+FEE R  ++ +   D  LA+T      S+   CKNC  TGH F NCP IECRY H  GHIL++CP +PPK     T++KN     +SS +T   + STT    +SD+++L+ Q++SS  S ++  + GN RW  DS C NHMT++   +   +   SLPPI+ A GN MNITH G ++T +L LP TY +PNL  NL+S+G+LC+ GL V FS +G QVQDPQT   IGTGR+VGRLF+L SL +P   ISA   NS  +QWHLRLGHAS  K++ LIS   L SI K  PF+CL+CKLAKQP +SF++S S  D   + +++ +  PAP   V
Sbjct:    1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTRDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFDNAKELWDFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVKAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDVVLASTYSPPGASSTF-CKNCKLTGHKFINCPKIECRYCHKSGHILDNCPIKPPKPRNYSTRAKNFTKPNNSSAATVAPDNSTTPQFQISDLQSLLNQLISSPFS-ALAVSPGN-RWLLDSGCCNHMTSNYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGLTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFKLLSLQVPSPSISAPVTNSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSKSTSICDKPFDLIHSDIWGPAPTTTV 522          
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5D3D7V8|A0A5D3D7V8_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00480 PE=4 SV=1)

HSP 1 Score: 516.153 bits (1328), Expect = 1.297e-166
Identity = 269/525 (51.24%), Postives = 346/525 (65.90%), Query Frame = 0
Query:    1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTT--ITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSI-KVEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELV 498
            MEK++I +PI+T L G NY  W   MKSFLIGRKLWRIVTGD+ K T+   E  +KF +RLE+WDSKNHQIITWL NT                        R+++ GL HYYQL  +L N  QE GQSVN++LA +QPIW Q+  A IS+DHL LI+VLM LRPEYE+VRA+LLH++PLPSLD AIQEI+FEE R  ++ +   DA LA+T      S+   CKNC  TGH F NCP IECRY H  GHIL++CP +PP+     T++KN     +SS +T   + ST     +SD+++L+ Q++SS  S+++  + GN RW  DS C NHMT+D   +   +   SLPPI+ A GN MNITH G ++T +L LP TY +PNL  NL+S+G+LC+ G  V FS +G QVQDPQT   IGTGR+VGRLFEL SL +P   ISA   +S  +QWHLRLGHAS  K++ LIS   L SI K  PF+CL+CKLAKQP +SF+ S S  D   + +++ +  PAP   V
Sbjct:    1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTF-CKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSP-SSALAVSPGN-RWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTV 522          
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5D3DT06|A0A5D3DT06_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00190 PE=4 SV=1)

HSP 1 Score: 516.153 bits (1328), Expect = 1.427e-166
Identity = 269/525 (51.24%), Postives = 346/525 (65.90%), Query Frame = 0
Query:    1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTT--ITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSI-KVEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELV 498
            MEK++I +PI+T L G NY  W   MKSFLIGRKLWRIVTGD+ K T+   E  +KF +RLE+WDSKNHQIITWL NT                        R+++ GL HYYQL  +L N  QE GQSVN++LA +QPIW Q+  A IS+DHL LI+VLM LRPEYE+VRA+LLH++PLPSLD AIQEI+FEE R  ++ +   DA LA+T      S+   CKNC  TGH F NCP IECRY H  GHIL++CP +PP+     T++KN     +SS +T   + ST     +SD+++L+ Q++SS  S+++  + GN RW  DS C NHMT+D   +   +   SLPPI+ A GN MNITH G ++T +L LP TY +PNL  NL+S+G+LC+ G  V FS +G QVQDPQT   IGTGR+VGRLFEL SL +P   ISA   +S  +QWHLRLGHAS  K++ LIS   L SI K  PF+CL+CKLAKQP +SF+ S S  D   + +++ +  PAP   V
Sbjct:    1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTF-CKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSP-SSALAVSPGN-RWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTV 522          
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5A7UPX9|A0A5A7UPX9_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G00890 PE=4 SV=1)

HSP 1 Score: 515.768 bits (1327), Expect = 2.275e-166
Identity = 268/525 (51.05%), Postives = 346/525 (65.90%), Query Frame = 0
Query:    1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTT--ITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSI-KVEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELV 498
            MEK++I +PI+T L G NY  W   MKSFLIGRKLWRIVTGD+ K T+   E  +KF +RLE+WDSKNHQIITWL NT                        R+++ GL HYYQL  +L N  QE GQSVN++LA +QP+W Q+  A IS+DHL LI+VLM LRPEYE++RA+LLH++PLPSLD AIQEI+FEE R  ++ +   DA LA+T      S+   CKNC  TGH F NCP IECRY H  GHIL++CP +PP+     TK+KN     +SS +T   + ST     +SD+++L+ Q++SS  S+++  + GN RW  DS C NHMT+D   +   +   SLPPI+ A GN MNITH G ++T +L LP TY +PNL  NL+S+G+LC+ G  V FS +G QVQDPQT   IGTGR+VGRLFEL SL +P   ISA   +S  +QWHLRLGHAS  K++ LIS   L SI K  PF+CL+CKLAKQPV+SF+ S S  D   + +++ +  P P   V
Sbjct:    1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPMWTQLDQATISKDHLRLIKVLMGLRPEYESIRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTF-CKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTKAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSP-SSALAVSPGN-RWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPVLSFSTSTSICDKPFDLIHSDIWGPTPTSTV 522          
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5D3C0D7|A0A5D3C0D7_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00020 PE=4 SV=1)

HSP 1 Score: 516.153 bits (1328), Expect = 2.500e-166
Identity = 269/525 (51.24%), Postives = 346/525 (65.90%), Query Frame = 0
Query:    1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTT--ITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSI-KVEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELV 498
            MEK++I +PI+T L G NY  W   MKSFLIGRKLWRIVTGD+ K T+   E  +KF +RLE+WDSKNHQIITWL NT                        R+++ GL HYYQL  +L N  QE GQSVN++LA +QPIW Q+  A IS+DHL LI+VLM LRPEYE+VRA+LLH++PLPSLD AIQEI+FEE R  ++ +   DA LA+T      S+   CKNC  TGH F NCP IECRY H  GHIL++CP +PP+     T++KN     +SS +T   + ST     +SD+++L+ Q++SS  S+++  + GN RW  DS C NHMT+D   +   +   SLPPI+ A GN MNITH G ++T +L LP TY +PNL  NL+S+G+LC+ G  V FS +G QVQDPQT   IGTGR+VGRLFEL SL +P   ISA   +S  +QWHLRLGHAS  K++ LIS   L SI K  PF+CL+CKLAKQP +SF+ S S  D   + +++ +  PAP   V
Sbjct:    1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTF-CKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSP-SSALAVSPGN-RWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTV 522          
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5A7VIT8|A0A5A7VIT8_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 516.153 bits (1328), Expect = 2.553e-166
Identity = 269/525 (51.24%), Postives = 346/525 (65.90%), Query Frame = 0
Query:    1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTT--ITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSI-KVEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELV 498
            MEK++I +PI+T L G NY  W   MKSFLIGRKLWRIVTGD+ K T+   E  +KF +RLE+WDSKNHQIITWL NT                        R+++ GL HYYQL  +L N  QE GQSVN++LA +QPIW Q+  A IS+DHL LI+VLM LRPEYE+VRA+LLH++PLPSLD AIQEI+FEE R  ++ +   DA LA+T      S+   CKNC  TGH F NCP IECRY H  GHIL++CP +PP+     T++KN     +SS +T   + ST     +SD+++L+ Q++SS  S+++  + GN RW  DS C NHMT+D   +   +   SLPPI+ A GN MNITH G ++T +L LP TY +PNL  NL+S+G+LC+ G  V FS +G QVQDPQT   IGTGR+VGRLFEL SL +P   ISA   +S  +QWHLRLGHAS  K++ LIS   L SI K  PF+CL+CKLAKQP +SF+ S S  D   + +++ +  PAP   V
Sbjct:    1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTF-CKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSP-SSALAVSPGN-RWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTV 522          
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q94HW2|POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.919e-12
Identity = 58/195 (29.74%), Postives = 95/195 (48.72%), Query Frame = 0
Query:  292 HGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVS----TLNLTLPDTYYIPNLKLNLISIGKLCE-QGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFEL-----QSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSIKV--EPFDCLHCKLAKQPVISFNRS 474
            + ++ W  DS  ++H+T+D  +L      +    +  A G+T+ I+HTG  S    +  L L +  Y+PN+  NLIS+ +LC   G++V F P+  QV+D  T   +  G+    L+E      Q + L     S AT +S    WH RLGH + S +  +IS   L  +    +   C  C + K   + F++S
Sbjct:  326 YSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSS----WHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQS 516          
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/Swiss-Prot
Match: sp|P10978|POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.460e-11
Identity = 110/517 (21.28%), Postives = 194/517 (37.52%), Query Frame = 0
Query:   14 LTGPN-YNLWVQGMKSFLIGRKLWRIVTGDVVK-------STQDKDESAAKFADRLEDWDSKNHQII-------TWLR-NTRYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQIS-LAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIF-EETRQNLDKTPQMDATLATTRCSHQKSNHHP------------------CKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTTITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVST-----LNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSIK---VEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLN 486
              G N ++ W + M+  LI + L +++  D  K          D DE AA  A RL   D   + II        W R  + Y +  L +   L   L+      G +    L     +  Q++ L    E+    I +L +L   Y+ +  ++LH      L      ++  E+ R+  +   Q   T    R   + SN++                   C NCN+ GH   +CP                     P++ +G T             S    + +T   + + + ++  +  +     M+ +   S W  D+  S+H  T ++ L    +      +   + +   I   G +         L L D  ++P+L++NLIS   L   G   YF+    ++   +   +I  G   G L+   +  + +  ++AA     +  WH R+GH S   +Q L  + L+   K   V+P  C +C   KQ  +SF    +SS+ K N L+
Sbjct:   11 FNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAAS-AIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPN--------------------PRKGKGET-------------SGQKNDDNTAAMVQNNDNVV--LFINEEEECMHLSGPESEWVVDTAASHH-ATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRL--TKGSLVIAKGVARGTLYRTNA-EICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKP--CDYCLFGKQHRVSFQ---TSSERKLNILD 482          
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9ZT94|POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.277e-11
Identity = 57/190 (30.00%), Postives = 91/190 (47.89%), Query Frame = 0
Query:  297 WFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHV----STLNLTLPDTYYIPNLKLNLISIGKLCEQG-LNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFEL-----QSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSIKV--EPFDCLHCKLAKQPVISFNRS 474
            W  DS  ++H+T+D  +L      +    +  A G+T+ ITHTG      S+ +L L    Y+PN+  NLIS+ +LC    ++V F P+  QV+D  T   +  G+    L+E      Q++ +     S AT +S    WH RLGH S + +  +IS   L  +    +   C  C + K   + F+ S
Sbjct:  310 WLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSS----WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNS 495          
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A2K3MW90|A0A2K3MW90_TRIPR0.000e+066.39Retrovirus-related Pol polyprotein from transposon... [more]
tr|A0A2K3PHL1|A0A2K3PHL1_TRIPR0.000e+057.89Glutamate receptor-like protein OS=Trifolium prate... [more]
tr|A0A6N2LVZ3|A0A6N2LVZ3_SALVM0.000e+066.58Uncharacterized protein OS=Salix viminalis OX=4068... [more]
tr|A0A5D3CT53|A0A5D3CT53_CUCME1.405e-17051.43Retrovirus-related Pol polyprotein from transposon... [more]
tr|A0A5A7UGZ4|A0A5A7UGZ4_CUCME7.980e-16951.05Retrovirus-related Pol polyprotein from transposon... [more]
tr|A0A5D3D7V8|A0A5D3D7V8_CUCME1.297e-16651.24Retrovirus-related Pol polyprotein from transposon... [more]
tr|A0A5D3DT06|A0A5D3DT06_CUCME1.427e-16651.24Retrovirus-related Pol polyprotein from transposon... [more]
tr|A0A5A7UPX9|A0A5A7UPX9_CUCME2.275e-16651.05Retrovirus-related Pol polyprotein from transposon... [more]
tr|A0A5D3C0D7|A0A5D3C0D7_CUCME2.500e-16651.24Retrovirus-related Pol polyprotein from transposon... [more]
tr|A0A5A7VIT8|A0A5A7VIT8_CUCME2.553e-16651.24Retrovirus-related Pol polyprotein from transposon... [more]
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BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
sp|Q94HW2|POLR1_ARATH2.919e-1229.74Retrovirus-related Pol polyprotein from transposon... [more]
sp|P10978|POLX_TOBAC1.460e-1121.28Retrovirus-related Pol polyprotein from transposon... [more]
sp|Q9ZT94|POLR2_ARATH3.277e-1130.00Retrovirus-related Pol polyprotein from transposon... [more]
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BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 402..466
e-value: 4.4E-11
score: 42.5
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 78..174
e-value: 7.5E-7
score: 29.0
NoneNo IPR availableGENE3D4.10.60.10coord: 178..241
e-value: 8.2E-6
score: 27.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 480..519
NoneNo IPR availablePANTHERPTHR34222GAG_PRE-INTEGRS DOMAIN-CONTAINING PROTEINcoord: 75..291
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 200..214
score: 8.795613

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.3g040320.1_tif_v1 ID=Vfaba.Tiffany.R1.3g040320.1_tif_v1; Name=Vfaba.Tiffany.R1.3g040320.1; organism=Vicia faba; type=mRNA; length=1599bp
ATGGAGAAAACTGATATTTTTAAACCCATTACAACCACCTTAACCGGACC
AAACTACAATCTCTGGGTCCAAGGAATGAAGAGTTTTCTGATCGGACGCA
AGCTTTGGCGCATAGTCACCGGAGATGTCGTCAAGTCAACTCAAGACAAA
GATGAATCTGCTGCAAAATTTGCGGACCGCCTTGAAGATTGGGATAGTAA
AAATCACCAGATCATCACGTGGCTGCGCAACACCCGCTATCAAACCACTG
GCCTTGACCATTATTATCAGTTATGGACCACACTTCACAATACCAAGCAA
GAACCTGGTCAATCAGTGAATGATTTTCTCGCTCAAGTCCAACCAATTTG
GCATCAAATATCGCTTGCCAAAATCAGTGAAGATCACCTTCATCTCATTC
AAGTCCTTATGGCCCTTCGGCCCGAATATGAAGCCGTACGAGCCTCACTG
CTGCATCAAAATCCGCTTCCATCATTGGACACTGCTATTCAAGAAATCAT
TTTTGAAGAAACGCGTCAGAATCTAGACAAAACTCCTCAAATGGATGCTA
CTCTTGCAACTACTCGATGCTCACATCAAAAATCGAATCATCATCCATGT
AAGAATTGCAATCGCACTGGTCATATATTTGCTAACTGTCCTACTATAGA
GTGTAGGTACTCCCATGGTATCGGTCACATTCTTGAACATTGTCCCACGC
GACCTCCAAAACAAAATCGTGGCTTCACCAAATCCAAGAATGTTCTAACG
TCTGGATCTTCCTCCATCTCTACTACTACCACTGAAGGTTCGACGACCAT
CACTATGAGTGATATTGAAGCTTTAATCAAACAGGTTATGTCTTCCAACA
ACTCTACTTCCATGTATGCTACTCACGGTAATTCTCGTTGGTTTTTTGAT
TCTACATGTAGTAATCATATGACCACTGATATTAAATCATTACCTGCTGC
GACACTTGTTTCATCTTTGCCACCAATCCACACAGCCAGTGGAAATACAA
TGAATATCACTCATACTGGTCATGTATCCACCTTAAATCTCACCCTTCCT
GACACATATTACATTCCTAACTTGAAACTTAATCTTATTTCCATTGGTAA
ACTGTGTGAACAAGGACTGAATGTTTATTTTTCTCCCTCTGGTGTTCAGG
TACAGGATCCACAGACGAAGCATATCATTGGGACAGGTCGCAGGGTGGGT
CGTCTATTTGAGCTACAATCTCTTCACCTTCCTAAAGATCATATTTCTGC
TGCTACTATAAATTCTCCAATTCATCAATGGCATCTTCGTCTTGGTCATG
CCTCAGCAAGCAAAATTCAACCTCTAATATCTCGTGGGTTATTAGGATCC
ATAAAGGTTGAGCCTTTTGATTGTTTACATTGTAAACTTGCCAAACAGCC
TGTAATATCATTCAATCGTAGTTTTTCTAGTTCAGATAATAAATCTAATA
ACCTCAATACTCCTCTTCCCTCACCTGCTCCTAATGAACTTGTTCCAAAT
GTTGAGCTCAATACTCGTCCGCCCTCACCTGCTCCTACTGAACCTGTTTC
AGATGTTGATATTGTATCTGCATCTCGCCATTCCACCCGAATGATATGA
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protein sequence of Vfaba.Tiffany.R1.3g040320.1_tif_v1

>Vfaba.Tiffany.R1.3g040320.1_tif_v1 ID=Vfaba.Tiffany.R1.3g040320.1_tif_v1; Name=Vfaba.Tiffany.R1.3g040320.1_tif_v1; organism=Vicia faba; type=polypeptide; length=532bp
MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDK
DESAAKFADRLEDWDSKNHQIITWLRNTRYQTTGLDHYYQLWTTLHNTKQ
EPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASL
LHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPC
KNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLT
SGSSSISTTTTEGSTTITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFD
STCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLP
DTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVG
RLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGS
IKVEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELVPN
VELNTRPPSPAPTEPVSDVDIVSASRHSTRMI
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mRNA from alignment at chr3:274988718..274991816-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.3g040320.1_tif_v1 ID=Vfaba.Tiffany.R1.3g040320.1_tif_v1; Name=Vfaba.Tiffany.R1.3g040320.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:274988718..274991816- (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR025724GAG-pre-integrase_dom
IPR001878Znf_CCHC
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding