Vfaba.Tiffany.R1.3g040320.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MW90|A0A2K3MW90_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Trifolium pratense OX=57577 GN=L195_g018260 PE=4 SV=1) HSP 1 Score: 727.243 bits (1876), Expect = 0.000e+0 Identity = 401/604 (66.39%), Postives = 437/604 (72.35%), Query Frame = 0 Query: 1 MEKTDIFKPITTTLTGP-NYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTTITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRV-----------------GRLFELQSLHLPKDHISA-ATINSPIHQWHLRLGHASASKIQPLIS--RGLLGSIKVEPFD----CLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELVPNV------ELNTRPPS------------------PAPTEPVSDVDIVSASRHSTRM 531 MEK+DIFKPITTTLTG NY+LW QGMKSFLIGRKLWRIVTGD+VK TQ+KDESA KFA+RLEDWDSKNHQIITWLRNT RYQTTGL HYYQLWTTLHNTKQE GQSVNDFLAQVQPIWHQ+SLAKISEDHLHLIQVLMALRPEYEAVRASLLH+NPLPSLDTAIQEIIFEETR NLDKTPQMD LAT R SHQKSNH PCKNCNR+GH+FANCPTIECRY HGIGHILEHCPTRPPKQNRGFTKSKNV SGSSSIS TEGST ITMSDIEALIKQVMSSN ST+M ATHGNSRWFFDS CSNHMTTDIKSLP+ATLVSSLPPIHTASGNTMNITHTGHVST NLTLPDTYYIPNLKLNLISIG+LCEQGLNV FS SGVQVQDPQTK IIGTGRR+ F + L P + I + + Q+ L +S ++Q + L+ + + ++ C+ + Q S + ++++ P P EL P+ ELNT PPS PAPTE V DVD V ASRHSTR+ Sbjct: 1 MEKSDIFKPITTTLTGSSNYDLWAQGMKSFLIGRKLWRIVTGDIVKPTQEKDESATKFAERLEDWDSKNHQIITWLRNTSVPSIHIQFNNYDTAKAIWDFLKNRYQTTGLAHYYQLWTTLHNTKQEHGQSVNDFLAQVQPIWHQMSLAKISEDHLHLIQVLMALRPEYEAVRASLLHRNPLPSLDTAIQEIIFEETRLNLDKTPQMDVALAT-RFSHQKSNH-PCKNCNRSGHVFANCPTIECRYCHGIGHILEHCPTRPPKQNRGFTKSKNVPKSGSSSISAAATEGSTAITMSDIEALIKQVMSSNTSTAMSATHGNSRWFFDSACSNHMTTDIKSLPSATLVSSLPPIHTASGNTMNITHTGHVSTSNLTLPDTYYIPNLKLNLISIGQLCEQGLNVNFSLSGVQVQDPQTKQIIGTGRRIMQWNIVNPPCFSFSVSKALWFNVHVLTPPNKMVGQNENIVTSLTQFVL---FSSQPRVQKDFGGKQLLMFLMSAQNYNRVLACVAFLVMAQNTKDIAVGIQSPTDYASHVMLPF-GKTPFELFPSSNADNSNELNTCPPSXTPTELVPDVELNTRPSAPAPTESVPDVDTVPASRHSTRV 598
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PHL1|A0A2K3PHL1_TRIPR (Glutamate receptor-like protein OS=Trifolium pratense OX=57577 GN=L195_g011459 PE=4 SV=1) HSP 1 Score: 571.237 bits (1471), Expect = 0.000e+0 Identity = 323/558 (57.89%), Postives = 360/558 (64.52%), Query Frame = 0 Query: 1 MEKTDIFKPITTTLTG-PNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNTRYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTTITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRV---GRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSIKVEPFD----CLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPN----------------ELVPNV---ELNTRPPSPAPTEPVSDVDIVSASRHSTRM 531 MEKT+I KPITTTL G P+YN+WVQGMKSFLIGRKLWRIVT DV+K T++K+ES KFA RLE+WDSKNHQIITWLRNT LWTTL NTK PGQSVNDFLAQVQPIWHQIS AKISEDHLHLIQ LMALRPEYEAVRASLLH+NPLPSLDTAIQEIIFEET+ NCP +PPKQN GF KSKNV SGSSSIST T+GST ITMSDIEALIKQVMSSN S M ATHGNSRWFFDS C NH TTDIKSLP+ TLVSSLPPIHTA GNTMNITHTGHVST NLTLPDTYY+PNL LNLIS+G+LCEQGLNVYFSPSGVQVQDPQTK IIGTGRRV F + L P + +N I L QP + + G + + ++ C++ + S ++++ P + L+P + +LNTRPPSPAPTEPVSDVDIV ASRHSTR+ Sbjct: 1 MEKTEIVKPITTTLIGQPSYNIWVQGMKSFLIGRKLWRIVTRDVIKPTREKNESDTKFAKRLEEWDSKNHQIITWLRNT-----------SLWTTLLNTKLLPGQSVNDFLAQVQPIWHQISFAKISEDHLHLIQFLMALRPEYEAVRASLLHRNPLPSLDTAIQEIIFEETQ---------------------------------------NCP------------------RQPPKQNCGFNKSKNVPKSGSSSISTAATKGSTAITMSDIEALIKQVMSSNTSIVMSATHGNSRWFFDSACCNHTTTDIKSLPSVTLVSSLPPIHTAIGNTMNITHTGHVSTSNLTLPDTYYLPNLTLNLISVGQLCEQGLNVYFSPSGVQVQDPQTKQIIGTGRRVVSKALRFNVHVLTPPNKMVR---LNENIVT---SLTQIVLFSYQPRVQKSFGGLMSAQNYNRVLTCVYFLVMAHNTKDIVVGIQSPTYYASHVMLPFGKTPCSPLFLHFIILLALTHFISLIPQLSCFQLNTRPPSPAPTEPVSDVDIVPASRHSTRV 484
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6N2LVZ3|A0A6N2LVZ3_SALVM (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS271979 PE=4 SV=1) HSP 1 Score: 533.102 bits (1372), Expect = 0.000e+0 Identity = 267/401 (66.58%), Postives = 306/401 (76.31%), Query Frame = 0 Query: 1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLT-SGSSSISTTTTEGSTTITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVY 376 MEK+ I +PI T L+G NYNLW+QGMKSFLIGRKLWRIVTGD+ K T+++DE+ KFADRLEDWDSKNHQIITW RNT RYQTTGL HYYQLWTTLH+ KQ GQSVNDFLAQVQPIW+Q+S AKISEDHLHLIQVLMALRPEYE+VRASLLH+NPLPSL+TAIQEIIFEETR NLDK PQ D LATTR SHQK + CKNC++ GH+FA CPTIECRY H +GHILEHCPTRPP+ GF+KSKN+ S SS+ T GST +TMSD+E ++KQV+SSN ST+M AT GNS WFFDS C NHMT DI L T +SLP IHTA+G TM ITHTGHV+T NL++ DTY+IPNL LNLIS+G G + + Sbjct: 1 MEKSGISQPIATVLSGSNYNLWIQGMKSFLIGRKLWRIVTGDITKPTKEQDETDTKFADRLEDWDSKNHQIITWFRNTSVPAIHIQFADYDSAKEVWDFLATRYQTTGLAHYYQLWTTLHSLKQGSGQSVNDFLAQVQPIWNQLSQAKISEDHLHLIQVLMALRPEYESVRASLLHRNPLPSLNTAIQEIIFEETRLNLDKPPQFDIALATTRSSHQKFGNQTCKNCHQMGHVFATCPTIECRYCHVLGHILEHCPTRPPRSKGGFSKSKNMFKPSSSSATVAAATPGSTFVTMSDLEEMVKQVISSNPSTAMSATPGNSPWFFDSACCNHMTPDIDLLSDKTNATSLPLIHTANGTTMPITHTGHVTTSNLSMDDTYHIPNLTLNLISVGTGLTNGTDSW 401
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5D3CT53|A0A5D3CT53_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G00560 PE=4 SV=1) HSP 1 Score: 516.153 bits (1328), Expect = 1.405e-170 Identity = 270/525 (51.43%), Postives = 347/525 (66.10%), Query Frame = 0 Query: 1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTT--ITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSI-KVEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELV 498 MEK++I +PI+T L G NY W MKSFLIGRKLWRIVT D+ K T+ E +KF +RLE+WDSKNHQIITWL NT R+++ GL HYYQL +L N QE GQSVN++LA +QPIW Q+ A IS+DHL LI+VLM LRPEYE+VRA+LLH++PLPSLD AIQEI+FEE R ++ + D LA+T S+ CKNC TGH F NCP IECRY H GHIL++CP +PPK T++KN +SS +T + STT +SD+++L+ Q++SS S+++ + GN RW DS C NHMT+D + + SLPPI+ A GN MNITH G ++T +L LP TY +PNL NL+S+G+LC+ GL V FS +G QVQDPQT IGTGR+VGRLFEL SL +P ISA +S +QWHLRLGHAS K++ LIS L SI K PF+CL+CKLAKQP +SF++S S D + +++ + PAP V Sbjct: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTRDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFDNAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDVVLASTYSPPGASSTF-CKNCKLTGHKFINCPKIECRYCHKSGHILDNCPIKPPKPRNYSTRAKNFTKPNNSSAATVAPDNSTTPQFQISDLQSLLNQLISSP-SSALAVSPGN-RWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGLTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSKSTSICDKPFDLIHSDIWGPAPTTTV 522
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5A7UGZ4|A0A5A7UGZ4_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G002020 PE=4 SV=1) HSP 1 Score: 511.531 bits (1316), Expect = 7.980e-169 Identity = 268/525 (51.05%), Postives = 346/525 (65.90%), Query Frame = 0 Query: 1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTT--ITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSI-KVEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELV 498 MEK++I +PI+T L G NY W MKSFLIGRKLWRIVT D+ K T+ E +KF +RLE+WDSKNHQIITWL NT R+++ GL HYYQL +L N QE GQSVN++LA +QPIW Q+ A IS+DHL LI+VLM LRPEYE+V+A+LLH++PLPSLD AIQEI+FEE R ++ + D LA+T S+ CKNC TGH F NCP IECRY H GHIL++CP +PPK T++KN +SS +T + STT +SD+++L+ Q++SS S ++ + GN RW DS C NHMT++ + + SLPPI+ A GN MNITH G ++T +L LP TY +PNL NL+S+G+LC+ GL V FS +G QVQDPQT IGTGR+VGRLF+L SL +P ISA NS +QWHLRLGHAS K++ LIS L SI K PF+CL+CKLAKQP +SF++S S D + +++ + PAP V Sbjct: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTRDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFDNAKELWDFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVKAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDVVLASTYSPPGASSTF-CKNCKLTGHKFINCPKIECRYCHKSGHILDNCPIKPPKPRNYSTRAKNFTKPNNSSAATVAPDNSTTPQFQISDLQSLLNQLISSPFS-ALAVSPGN-RWLLDSGCCNHMTSNYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGLTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFKLLSLQVPSPSISAPVTNSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSKSTSICDKPFDLIHSDIWGPAPTTTV 522
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5D3D7V8|A0A5D3D7V8_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00480 PE=4 SV=1) HSP 1 Score: 516.153 bits (1328), Expect = 1.297e-166 Identity = 269/525 (51.24%), Postives = 346/525 (65.90%), Query Frame = 0 Query: 1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTT--ITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSI-KVEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELV 498 MEK++I +PI+T L G NY W MKSFLIGRKLWRIVTGD+ K T+ E +KF +RLE+WDSKNHQIITWL NT R+++ GL HYYQL +L N QE GQSVN++LA +QPIW Q+ A IS+DHL LI+VLM LRPEYE+VRA+LLH++PLPSLD AIQEI+FEE R ++ + DA LA+T S+ CKNC TGH F NCP IECRY H GHIL++CP +PP+ T++KN +SS +T + ST +SD+++L+ Q++SS S+++ + GN RW DS C NHMT+D + + SLPPI+ A GN MNITH G ++T +L LP TY +PNL NL+S+G+LC+ G V FS +G QVQDPQT IGTGR+VGRLFEL SL +P ISA +S +QWHLRLGHAS K++ LIS L SI K PF+CL+CKLAKQP +SF+ S S D + +++ + PAP V Sbjct: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTF-CKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSP-SSALAVSPGN-RWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTV 522
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5D3DT06|A0A5D3DT06_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00190 PE=4 SV=1) HSP 1 Score: 516.153 bits (1328), Expect = 1.427e-166 Identity = 269/525 (51.24%), Postives = 346/525 (65.90%), Query Frame = 0 Query: 1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTT--ITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSI-KVEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELV 498 MEK++I +PI+T L G NY W MKSFLIGRKLWRIVTGD+ K T+ E +KF +RLE+WDSKNHQIITWL NT R+++ GL HYYQL +L N QE GQSVN++LA +QPIW Q+ A IS+DHL LI+VLM LRPEYE+VRA+LLH++PLPSLD AIQEI+FEE R ++ + DA LA+T S+ CKNC TGH F NCP IECRY H GHIL++CP +PP+ T++KN +SS +T + ST +SD+++L+ Q++SS S+++ + GN RW DS C NHMT+D + + SLPPI+ A GN MNITH G ++T +L LP TY +PNL NL+S+G+LC+ G V FS +G QVQDPQT IGTGR+VGRLFEL SL +P ISA +S +QWHLRLGHAS K++ LIS L SI K PF+CL+CKLAKQP +SF+ S S D + +++ + PAP V Sbjct: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTF-CKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSP-SSALAVSPGN-RWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTV 522
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5A7UPX9|A0A5A7UPX9_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G00890 PE=4 SV=1) HSP 1 Score: 515.768 bits (1327), Expect = 2.275e-166 Identity = 268/525 (51.05%), Postives = 346/525 (65.90%), Query Frame = 0 Query: 1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTT--ITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSI-KVEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELV 498 MEK++I +PI+T L G NY W MKSFLIGRKLWRIVTGD+ K T+ E +KF +RLE+WDSKNHQIITWL NT R+++ GL HYYQL +L N QE GQSVN++LA +QP+W Q+ A IS+DHL LI+VLM LRPEYE++RA+LLH++PLPSLD AIQEI+FEE R ++ + DA LA+T S+ CKNC TGH F NCP IECRY H GHIL++CP +PP+ TK+KN +SS +T + ST +SD+++L+ Q++SS S+++ + GN RW DS C NHMT+D + + SLPPI+ A GN MNITH G ++T +L LP TY +PNL NL+S+G+LC+ G V FS +G QVQDPQT IGTGR+VGRLFEL SL +P ISA +S +QWHLRLGHAS K++ LIS L SI K PF+CL+CKLAKQPV+SF+ S S D + +++ + P P V Sbjct: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPMWTQLDQATISKDHLRLIKVLMGLRPEYESIRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTF-CKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTKAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSP-SSALAVSPGN-RWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPVLSFSTSTSICDKPFDLIHSDIWGPTPTSTV 522
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5D3C0D7|A0A5D3C0D7_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00020 PE=4 SV=1) HSP 1 Score: 516.153 bits (1328), Expect = 2.500e-166 Identity = 269/525 (51.24%), Postives = 346/525 (65.90%), Query Frame = 0 Query: 1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTT--ITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSI-KVEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELV 498 MEK++I +PI+T L G NY W MKSFLIGRKLWRIVTGD+ K T+ E +KF +RLE+WDSKNHQIITWL NT R+++ GL HYYQL +L N QE GQSVN++LA +QPIW Q+ A IS+DHL LI+VLM LRPEYE+VRA+LLH++PLPSLD AIQEI+FEE R ++ + DA LA+T S+ CKNC TGH F NCP IECRY H GHIL++CP +PP+ T++KN +SS +T + ST +SD+++L+ Q++SS S+++ + GN RW DS C NHMT+D + + SLPPI+ A GN MNITH G ++T +L LP TY +PNL NL+S+G+LC+ G V FS +G QVQDPQT IGTGR+VGRLFEL SL +P ISA +S +QWHLRLGHAS K++ LIS L SI K PF+CL+CKLAKQP +SF+ S S D + +++ + PAP V Sbjct: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTF-CKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSP-SSALAVSPGN-RWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTV 522
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5A7VIT8|A0A5A7VIT8_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1) HSP 1 Score: 516.153 bits (1328), Expect = 2.553e-166 Identity = 269/525 (51.24%), Postives = 346/525 (65.90%), Query Frame = 0 Query: 1 MEKTDIFKPITTTLTGPNYNLWVQGMKSFLIGRKLWRIVTGDVVKSTQDKDESAAKFADRLEDWDSKNHQIITWLRNT------------------------RYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQISLAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIFEETRQNLDKTPQMDATLATTRCSHQKSNHHPCKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTT--ITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVSTLNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSI-KVEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLNTPLPSPAPNELV 498 MEK++I +PI+T L G NY W MKSFLIGRKLWRIVTGD+ K T+ E +KF +RLE+WDSKNHQIITWL NT R+++ GL HYYQL +L N QE GQSVN++LA +QPIW Q+ A IS+DHL LI+VLM LRPEYE+VRA+LLH++PLPSLD AIQEI+FEE R ++ + DA LA+T S+ CKNC TGH F NCP IECRY H GHIL++CP +PP+ T++KN +SS +T + ST +SD+++L+ Q++SS S+++ + GN RW DS C NHMT+D + + SLPPI+ A GN MNITH G ++T +L LP TY +PNL NL+S+G+LC+ G V FS +G QVQDPQT IGTGR+VGRLFEL SL +P ISA +S +QWHLRLGHAS K++ LIS L SI K PF+CL+CKLAKQP +SF+ S S D + +++ + PAP V Sbjct: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTF-CKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSP-SSALAVSPGN-RWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTV 522
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q94HW2|POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.919e-12 Identity = 58/195 (29.74%), Postives = 95/195 (48.72%), Query Frame = 0 Query: 292 HGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVS----TLNLTLPDTYYIPNLKLNLISIGKLCE-QGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFEL-----QSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSIKV--EPFDCLHCKLAKQPVISFNRS 474 + ++ W DS ++H+T+D +L + + A G+T+ I+HTG S + L L + Y+PN+ NLIS+ +LC G++V F P+ QV+D T + G+ L+E Q + L S AT +S WH RLGH + S + +IS L + + C C + K + F++S Sbjct: 326 YSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSS----WHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQS 516
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/Swiss-Prot
Match: sp|P10978|POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.460e-11 Identity = 110/517 (21.28%), Postives = 194/517 (37.52%), Query Frame = 0 Query: 14 LTGPN-YNLWVQGMKSFLIGRKLWRIVTGDVVK-------STQDKDESAAKFADRLEDWDSKNHQII-------TWLR-NTRYQTTGLDHYYQLWTTLHNTKQEPGQSVNDFLAQVQPIWHQIS-LAKISEDHLHLIQVLMALRPEYEAVRASLLHQNPLPSLDTAIQEIIF-EETRQNLDKTPQMDATLATTRCSHQKSNHHP------------------CKNCNRTGHIFANCPTIECRYSHGIGHILEHCPTRPPKQNRGFTKSKNVLTSGSSSISTTTTEGSTTITMSDIEALIKQVMSSNNSTSMYATHGNSRWFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHVST-----LNLTLPDTYYIPNLKLNLISIGKLCEQGLNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFELQSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSIK---VEPFDCLHCKLAKQPVISFNRSFSSSDNKSNNLN 486 G N ++ W + M+ LI + L +++ D K D DE AA A RL D + II W R + Y + L + L L+ G + L + Q++ L E+ I +L +L Y+ + ++LH L ++ E+ R+ + Q T R + SN++ C NCN+ GH +CP P++ +G T S + +T + + + ++ + + M+ + S W D+ S+H T ++ L + + + + I G + L L D ++P+L++NLIS L G YF+ ++ + +I G G L+ + + + ++AA + WH R+GH S +Q L + L+ K V+P C +C KQ +SF +SS+ K N L+ Sbjct: 11 FNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAAS-AIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPN--------------------PRKGKGET-------------SGQKNDDNTAAMVQNNDNVV--LFINEEEECMHLSGPESEWVVDTAASHH-ATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRL--TKGSLVIAKGVARGTLYRTNA-EICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKP--CDYCLFGKQHRVSFQ---TSSERKLNILD 482
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9ZT94|POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.277e-11 Identity = 57/190 (30.00%), Postives = 91/190 (47.89%), Query Frame = 0 Query: 297 WFFDSTCSNHMTTDIKSLPAATLVSSLPPIHTASGNTMNITHTGHV----STLNLTLPDTYYIPNLKLNLISIGKLCEQG-LNVYFSPSGVQVQDPQTKHIIGTGRRVGRLFEL-----QSLHLPKDHISAATINSPIHQWHLRLGHASASKIQPLISRGLLGSIKV--EPFDCLHCKLAKQPVISFNRS 474 W DS ++H+T+D +L + + A G+T+ ITHTG S+ +L L Y+PN+ NLIS+ +LC ++V F P+ QV+D T + G+ L+E Q++ + S AT +S WH RLGH S + + +IS L + + C C + K + F+ S Sbjct: 310 WLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSS----WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNS 495 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 3
BLAST of Vfaba.Tiffany.R1.3g040320.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 0
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.3g040320.1_tif_v1 ID=Vfaba.Tiffany.R1.3g040320.1_tif_v1; Name=Vfaba.Tiffany.R1.3g040320.1; organism=Vicia faba; type=mRNA; length=1599bpback to top protein sequence of Vfaba.Tiffany.R1.3g040320.1_tif_v1 >Vfaba.Tiffany.R1.3g040320.1_tif_v1 ID=Vfaba.Tiffany.R1.3g040320.1_tif_v1; Name=Vfaba.Tiffany.R1.3g040320.1_tif_v1; organism=Vicia faba; type=polypeptide; length=532bpback to top mRNA from alignment at chr3:274988718..274991816- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.3g040320.1_tif_v1 ID=Vfaba.Tiffany.R1.3g040320.1_tif_v1; Name=Vfaba.Tiffany.R1.3g040320.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:274988718..274991816- (Vicia fababack to top |