Vfaba.Tiffany.R1.5g100840.1

Transcript Overview
NameVfaba.Tiffany.R1.5g100840.1
Unique NameVfaba.Tiffany.R1.5g100840.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length396
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr5chromosomechr5:899935299..899936128 +Vicia faba cv. Tiffany genome v1.0n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.5g100840Vfaba.Tiffany.R1.5g100840_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.5g100840.1_tif_v1-exonVfaba.Tiffany.R1.5g100840.1_tif_v1-exon-chr5_tif_v1:899935299..899935510Vicia fabaexon
Vfaba.Tiffany.R1.5g100840.1_tif_v1-exonVfaba.Tiffany.R1.5g100840.1_tif_v1-exon-chr5_tif_v1:899935945..899936128Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.5g100840.1_tif_v1-cdsVfaba.Tiffany.R1.5g100840.1_tif_v1-cds-chr5_tif_v1:899935299..899935510Vicia fabaCDS
Vfaba.Tiffany.R1.5g100840.1_tif_v1-cdsVfaba.Tiffany.R1.5g100840.1_tif_v1-cds-chr5_tif_v1:899935945..899936128Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.5g100840.1_tif_v1Vfaba.Tiffany.R1.5g100840.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.5g100840.1_tif_v1Vfaba.Tiffany.R1.5g100840.1_tif_v1-proteinVicia fabapolypeptide


Homology
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.5g100840.1 vs.
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Tiffany.R1.5g100840.1 vs.
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Tiffany.R1.5g100840.1 vs.
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.5g100840.1_tif_v1 ID=Vfaba.Tiffany.R1.5g100840.1_tif_v1; Name=Vfaba.Tiffany.R1.5g100840.1; organism=Vicia faba; type=mRNA; length=396bp
ATGCAGAAGAGAAAAGAAGATGATGGGAGAAGATTCATGCTACTACTGGG
GAGACTAAGGGTCCCCAGAGTACCTCATAAGGATCTAATTCCAAACTCTC
CCTATGTGAAGGCTCAAAGGCTTAAGGATGGTTCTTCCCCATTGTCGGTG
CCGCCTTGCCCAATTATAGGACAAAGATCACTAAAGCACGACCTGATATG
TTATGGAGTGATAACAAGTTTCCTTCCTTTACCCAAGATGGATATGAGCC
AAATGTACTTCCTTAAATTTGTTTGTGATGGCCAACTAGTGGATGAAGAG
GTGGCGACTCCTTTAGAGCTTAAAAATTATGCTTTCGCCAAGGACTCCAA
GGACGAGGGAAGGGAAATAGGAGGCGGTGAATCTAGAGCCACTTAA
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protein sequence of Vfaba.Tiffany.R1.5g100840.1_tif_v1

>Vfaba.Tiffany.R1.5g100840.1_tif_v1 ID=Vfaba.Tiffany.R1.5g100840.1_tif_v1; Name=Vfaba.Tiffany.R1.5g100840.1_tif_v1; organism=Vicia faba; type=polypeptide; length=131bp
MQKRKEDDGRRFMLLLGRLRVPRVPHKDLIPNSPYVKAQRLKDGSSPLSV
PPCPIIGQRSLKHDLICYGVITSFLPLPKMDMSQMYFLKFVCDGQLVDEE
VATPLELKNYAFAKDSKDEGREIGGGESRAT
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mRNA from alignment at chr5:899935299..899936128+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.5g100840.1_tif_v1 ID=Vfaba.Tiffany.R1.5g100840.1_tif_v1; Name=Vfaba.Tiffany.R1.5g100840.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:899935299..899936128+ (Vicia faba
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