Vigan.07G024200.01

Transcript Overview
NameVigan.07G024200.01
Unique NamedrVigAngu.Shumari.1.0.Vigan.07G024200.01
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length996
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr07chromosomeChr07:1669452..1672573 -Vigna angularis cv. Shumari genome v1.a1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vasvvaR656Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvvaR707Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvvaR715Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvasL028Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvasL0127Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvasL0132Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvasL162Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvasL259Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvasL0392Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvasL503Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvasL0725Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvasL539Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvasL0886Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvasL0892Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvasL1147Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvasL1150Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvasL1363Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carvasL080Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvasL095Pisum sativum Cameor genome v1aPisum sativum
vasvasL084Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvasL139Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasL128Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vasvasL178Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvasR305Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvasL372Pisum sativum Cameor genome v1aPisum sativum
pvvasL336Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvasL548Pisum sativum Cameor genome v1aPisum sativum
carvasL617Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pvvasL562Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
carvasL733Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvasL818Pisum sativum Cameor genome v1aPisum sativum
carvasL787Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pvvasL935Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vasvfhR647Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vasvfhR657Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vasvfhR660Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vasvfhR681Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vasvrvR496Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vasvrvR515Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vasvrvR527Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vasvssR696Vicia sativa cv. Studenica genome v1.0Vicia sativa
vasvuR512Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vasvssR716Vicia sativa cv. Studenica genome v1.0Vicia sativa
vasvssR719Vicia sativa cv. Studenica genome v1.0Vicia sativa
vasvstR528Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvstR533Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuR529Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vasvstR534Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvssR732Vicia sativa cv. Studenica genome v1.0Vicia sativa
vasvuR537Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vasvstR558Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvumR495Vigna umbellata FF25 genome v1.0Vigna umbellata
vasvumR503Vigna umbellata FF25 genome v1.0Vigna umbellata
vasvumR506Vigna umbellata FF25 genome v1.0Vigna umbellata
vasvumR508Vigna umbellata FF25 genome v1.0Vigna umbellata
vasvstR574Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvumR528Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
jg9877.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigst.07G018500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_07G00196.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun05g281700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014643117.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat5g297080.1Pisum sativum Cameor genome v1aPisum sativum
rna-TanjilR_06002Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
XM_058924582.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Phvul.005G167000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.5g009000.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_30078Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.Ca_v2.0_02756Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Va05G054210.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigan.07G024200drVigAngu.Shumari.1.0.Vigan.07G024200Vigna angularisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
nbis-exon-95152drVigAngu.Shumari.1.0.nbis-exon-95152Vigna angularisexon
nbis-exon-95153drVigAngu.Shumari.1.0.nbis-exon-95153Vigna angularisexon
nbis-exon-95154drVigAngu.Shumari.1.0.nbis-exon-95154Vigna angularisexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
three_prime_utr-19756drVigAngu.Shumari.1.0.three_prime_utr-19756Vigna angularisthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-89150drVigAngu.Shumari.1.0.cds-89150Vigna angularisCDS
cds-89149drVigAngu.Shumari.1.0.cds-89149Vigna angularisCDS
cds-89148drVigAngu.Shumari.1.0.cds-89148Vigna angularisCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
five_prime_utr-20774drVigAngu.Shumari.1.0.five_prime_utr-20774Vigna angularisfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigAngu.Shumari.1.0.Vigan.07G024200.01drVigAngu.Shumari.1.0.Vigan.07G024200.01Vigna angularispolypeptide
drVigAngu.Shumari.1.0.Vigan.07G024200.01drVigAngu.Shumari.1.0.Vigan.07G024200.01-proteinVigna angularispolypeptide


Homology
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SFM8|A0A0S3SFM8_PHAAN (Nuclear pore complex protein NUP35 OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G024200 PE=3 SV=1)

HSP 1 Score: 678.322 bits (1749), Expect = 0.000e+0
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0 
Query:    1 MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
            MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV
Sbjct:    1 MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UP68|A0A0L9UP68_PHAAN (Nuclear pore complex protein NUP35 OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0212920 PE=3 SV=1)

HSP 1 Score: 678.322 bits (1749), Expect = 0.000e+0
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0 
Query:    1 MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
            MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV
Sbjct:    1 MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TXX0|A0A1S3TXX0_VIGRR (Nuclear pore complex protein NUP35 OS=Vigna radiata var. radiata OX=3916 GN=LOC106759779 PE=3 SV=1)

HSP 1 Score: 671.003 bits (1730), Expect = 0.000e+0
Identity = 327/331 (98.79%), Postives = 328/331 (99.09%), Query Frame = 0 
Query:    1 MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
            MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPG+SWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEV RNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPS RNSEVSTLKAPARSYY QNGNSTARQTGGTIASPTKSLVSKIMDLMFGV
Sbjct:    1 MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGLSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVHRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSARNSEVSTLKAPARSYYLQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6N8Z1|A0A4D6N8Z1_VIGUN (Nuclear pore complex protein NUP35 OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g208 PE=3 SV=1)

HSP 1 Score: 659.448 bits (1700), Expect = 0.000e+0
Identity = 321/331 (96.98%), Postives = 325/331 (98.19%), Query Frame = 0 
Query:    1 MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
            MS TVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGK+KSEASTSYALRGVQQNQQTSPG+SWWSPATAKS GEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANW+HILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNER+NNQGFMPLPLPS RNSEVSTLKAP R YY QNGNSTARQTGGTIASPTKSLVSKIMDLMFGV
Sbjct:    1 MSTTVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKSKSEASTSYALRGVQQNQQTSPGLSWWSPATAKSVGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWLHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERVNNQGFMPLPLPSARNSEVSTLKAPTRPYYQQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SE71|A0AA86SE71_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS16053 PE=4 SV=1)

HSP 1 Score: 651.358 bits (1679), Expect = 0.000e+0
Identity = 316/331 (95.47%), Postives = 323/331 (97.58%), Query Frame = 0 
Query:    1 MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
            MS TVQRTPRSGRQSLFFQDLASPVS RRGK SSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSP+ +SDTRTPIQTSNREFSTP K+KSEASTSYALRGVQQNQQ+SPG+SWWSPATAKSGGEQDEKG+SSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPS RNS+VSTLKAPAR YY QNGNSTARQTGGTIASPTKSLVSKIMDLMFGV
Sbjct:   38 MSTTVQRTPRSGRQSLFFQDLASPVSARRGKFSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPDTRSDTRTPIQTSNREFSTPVKSKSEASTSYALRGVQQNQQSSPGLSWWSPATAKSGGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSARNSDVSTLKAPARPYYPQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 368
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy TrEMBL (2024)
Match: tr|C6TDQ3|C6TDQ3_SOYBN (Nuclear pore complex protein NUP35 OS=Glycine max OX=3847 GN=100783752 PE=2 SV=1)

HSP 1 Score: 639.032 bits (1647), Expect = 0.000e+0
Identity = 309/331 (93.35%), Postives = 318/331 (96.07%), Query Frame = 0 
Query:    1 MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
            MS TVQRTPRS RQSLFFQDLASPVS RRGK SSP QAAAVS+LWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQ+SPE KSDTRTPIQTSN+EFSTP K+KSEASTSYALRGVQQNQQ SPG+SWWSP TAKSGGEQDE+G+SSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERL NQGFMPLPLPS RNSEVS+LKAP+R YY QNGNSTARQTGGTIASPTKSLVSKIMDLMFGV
Sbjct:    1 MSTTVQRTPRSSRQSLFFQDLASPVSARRGKFSSPSQAAAVSSLWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQISPETKSDTRTPIQTSNKEFSTPVKSKSEASTSYALRGVQQNQQGSPGLSWWSPTTAKSGGEQDERGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPLPLPSARNSEVSSLKAPSRPYYLQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2NNX4|A0A0B2NNX4_GLYSO (Nuclear pore complex protein NUP35 OS=Glycine soja OX=3848 GN=D0Y65_039707 PE=3 SV=1)

HSP 1 Score: 638.647 bits (1646), Expect = 0.000e+0
Identity = 309/331 (93.35%), Postives = 318/331 (96.07%), Query Frame = 0 
Query:    1 MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
            MS TVQRTPRS RQSLFFQDLASPVS RRGK SSP QAAAVS+LWRENFGSSDLPPPPVFTLEDRS+FSPESGILDYQ+SPE KSDTRTPIQTSN+EFSTP K+KSEASTSYALRGVQQNQQ SPG+SWWSP TAKSGGEQDEKG+SSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERL NQGFMPLPLPS RNSEVS+LKAP+R YY QNGNSTARQTGGTIASPTKSLVSKIMDLMFGV
Sbjct:    1 MSTTVQRTPRSSRQSLFFQDLASPVSARRGKFSSPSQAAAVSSLWRENFGSSDLPPPPVFTLEDRSNFSPESGILDYQISPETKSDTRTPIQTSNKEFSTPVKSKSEASTSYALRGVQQNQQGSPGLSWWSPTTAKSGGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPLPLPSARNSEVSSLKAPSRPYYLQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy TrEMBL (2024)
Match: tr|V7BXD8|V7BXD8_PHAVU (Nuclear pore complex protein NUP35 OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G167000g PE=3 SV=1)

HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0
Identity = 311/331 (93.96%), Postives = 318/331 (96.07%), Query Frame = 0 
Query:    1 MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
            MS TVQRTPRSGRQSLFFQDLASPVSTRRGK SSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSD RTP+QT NREFSTPGK+KSEASTSYALRGVQQNQQ SPG+SWWSPATAKSGGEQDEKG+SSPVEGVVQPGALITLPPPLEVARPEVQRNSLP GNLNEEEWVTVYGFSPGDTNMVLREFEKCG ILKHVPGPRDANWMHILYQNRSDAHKAL+KNGMQINGVLIVGVKLLDPMQRQALNERL+NQGFMPLPLPS RNS V+TLKAP R YY QNGNS ARQTGGTIASPTKSLVSKIMDLMFGV
Sbjct:    1 MSTTVQRTPRSGRQSLFFQDLASPVSTRRGKTSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDIRTPVQTYNREFSTPGKSKSEASTSYALRGVQQNQQASPGLSWWSPATAKSGGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPTGNLNEEEWVTVYGFSPGDTNMVLREFEKCGAILKHVPGPRDANWMHILYQNRSDAHKALSKNGMQINGVLIVGVKLLDPMQRQALNERLDNQGFMPLPLPSARNSGVNTLKAPVRPYYPQNGNS-ARQTGGTIASPTKSLVSKIMDLMFGV 330
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy TrEMBL (2024)
Match: tr|I1M5H3|I1M5H3_SOYBN (Nuclear pore complex protein NUP35 OS=Glycine max OX=3847 GN=100803145 PE=3 SV=1)

HSP 1 Score: 634.024 bits (1634), Expect = 0.000e+0
Identity = 308/331 (93.05%), Postives = 316/331 (95.47%), Query Frame = 0 
Query:    1 MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
            MS TVQRTPRS R SLFFQDLASPVS RRGK SSPGQAAAVS+LWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQ+SPE KSDTRTPIQTSN+EFSTP K+KSEASTSYALRGVQQNQQ SPG+SWWSP TAKS GEQDEKG+SSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANW+HILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERL NQGFMPLPL S RNSEVSTLKAP+R YY QNGNSTARQTGGTIASPTKSLVSKIMDLMFGV
Sbjct:    1 MSTTVQRTPRSSRHSLFFQDLASPVSARRGKFSSPGQAAAVSSLWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQISPEAKSDTRTPIQTSNKEFSTPLKSKSEASTSYALRGVQQNQQGSPGLSWWSPTTAKSVGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWVHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPLPLASARNSEVSTLKAPSRPYYLQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445IEU8|A0A445IEU8_GLYSO (Nuclear pore complex protein NUP35 OS=Glycine soja OX=3848 GN=D0Y65_032743 PE=3 SV=1)

HSP 1 Score: 634.024 bits (1634), Expect = 0.000e+0
Identity = 308/331 (93.05%), Postives = 316/331 (95.47%), Query Frame = 0 
Query:    1 MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
            MS TVQRTPRS R SLFFQDLASPVS RRGK SSPGQAAAVS+LWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQ+SPE KSDTRTPIQTSN+EFSTP K+KSEASTSYALRGVQQNQQ SPG+SWWSP TAKS GEQDEKG+SSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANW+HILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERL NQGFMPLPL S RNSEVSTLKAP+R YY QNGNSTARQTGGTIASPTKSLVSKIMDLMFGV
Sbjct:    1 MSTTVQRTPRSSRHSLFFQDLASPVSARRGKFSSPGQAAAVSSLWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQISPEAKSDTRTPIQTSNKEFSTPLKSKSEASTSYALRGVQQNQQGSPGLSWWSPTTAKSVGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWVHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPLPLASARNSEVSTLKAPSRPYYLQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|O04326|NUP35_ARATH (Nuclear pore complex protein NUP35 OS=Arabidopsis thaliana OX=3702 GN=NUP35 PE=1 SV=1)

HSP 1 Score: 488.804 bits (1257), Expect = 5.085e-174
Identity = 241/332 (72.59%), Postives = 273/332 (82.23%), Query Frame = 0 
Query:    1 MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQ-TGGTIASPTKSLVSKIMDLMFGV 331
            MSA   RTP+SGRQSL FQDLASPVS RRGK SSPGQAAAVSALWRENFG SDLPPPP++TL+DRSDFSPESGI DY  SP+ KSD RTP Q+S +   TPGK K EAS S++L   QQ+QQ S   SWWS + A S  EQD+KGK SPVEGVVQPGAL+TLPPP EVARPEVQR  +P GNL+EEEWVTVYGFSPGDTN+VLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKALNK GM INGV+IVGVK +DP+Q+QALNERLNNQGFMPLP PS   S  +T +  +R  Y QNG++ + Q +GG +ASP+KS+VSK  DLMFGV
Sbjct:    1 MSAAAHRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMYTLDDRSDFSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQQSQQVSGSPSWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQIIPTGNLDEEEWVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKALNKAGMMINGVVIVGVKPVDPIQKQALNERLNNQGFMPLPPPS---STRNTARPLSRPQYLQNGSAFSPQPSGGAMASPSKSMVSKFFDLMFGV 329
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6P6X9|NUP35_DANRE (Nucleoporin NUP35 OS=Danio rerio OX=7955 GN=nup35 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.146e-16
Identity = 51/163 (31.29%), Postives = 86/163 (52.76%), Query Frame = 0 
Query:  174 QRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVK-LLDPMQRQALNERLNNQGFM--PLPLPSVRNSEVSTLKAPARSY-YAQNGNSTARQTGGTIASPTK--SLVSKIMDLMFG 330
            Q ++L + +  ++ W+TV+GF P   + +L +F + G ILKHV      NWMH+ YQ++  A KAL+K+G      +++GVK  +D    ++L++   +      P+  P   +  +ST ++  R    A   +S+  Q      +P K  S VSK M+ MFG
Sbjct:  146 QGDALSSEDQLDDTWITVFGFPPASASYILLQFAQYGNILKHVMS-NTGNWMHVQYQSKLQARKALSKDGKIFGEAIMIGVKPCIDKSVMESLDKGSTSSSVFTPPVKAPCTPSHPLSTPRSVMRPLSAAYKASSSDYQVVSDQQTPKKDESFVSKAMEYMFG 307
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8NFH5|NUP35_HUMAN (Nucleoporin NUP35 OS=Homo sapiens OX=9606 GN=NUP35 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.625e-15
Identity = 60/174 (34.48%), Postives = 90/174 (51.72%), Query Frame = 0 
Query:  174 QRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVK------LLDPMQRQALNERLNNQGFMP----LPLPSVRNS--EVSTLKAPARSYYAQNGNS---TARQTGGTIASPTK--SLVSKIMDLMFG 330
            Q +SL + +  ++ WVTV+GF     + +L +F + G ILKHV      NWMHI YQ++  A KAL+K+G      +++GVK      +++   R AL+    +  F P    L  P+   S   +ST++  A +Y A   +    + RQT      P K  SLVSK M+ MFG
Sbjct:  161 QGDSLTSEDHLDDSWVTVFGFPQASASYILLQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDKSVMESSDRCALSS--PSLAFTPPIKTLGTPTQPGSTPRISTMRPLATAYKASTSDYQVISDRQT------PKKDESLVSKAMEYMFG 325
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9VWS2|NUP35_DROME (Nucleoporin Nup35 OS=Drosophila melanogaster OX=7227 GN=Nup35 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.518e-14
Identity = 53/152 (34.87%), Postives = 77/152 (50.66%), Query Frame = 0 
Query:  188 WVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVST--LKAPARSYYAQNGNSTARQTGGTIASPTKS-------LVSKIMDLMFG 330
            WVT++GF PG  +MVL+ F  CG I+  V  P++ NWM++ Y +R ++ KALN N   I G ++VGV       R  +++   N G       SV N+E+        A   ++Q     AR+    I SP K        L+ K MDL+FG
Sbjct:  192 WVTIFGFPPGAGSMVLQHFTVCGTIVDVVHAPQNGNWMYVRYSSRIESDKALNYNEKIIAGNVMVGVSRC--TDRSVIDKE--NIG-------SVPNAEIGDPPTSPSAIRPFSQQSYKLARKD--NIISPQKDVPQKSSGLMDKAMDLIFG 330
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q68FY1|NUP35_RAT (Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN=Nup35 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.047e-14
Identity = 58/176 (32.95%), Postives = 89/176 (50.57%), Query Frame = 0 
Query:  174 QRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLP----LPSVR----------NSEVSTLKAPARSYYAQNGNS---TARQTGGTIASPTK--SLVSKIMDLMFG 330
            Q +SL + +  ++ WVTV+GF     + +L +F + G ILKHV      NWMHI YQ++  A KAL+K+G      +++GVK   P   + + E  +++G +  P     P +R             VST++  A +Y A   +    + RQT      P K  SLVS+ M+ MFG
Sbjct:  160 QGDSLTSEDHLDDTWVTVFGFPQASASYILLQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVK---PCIDKNVMEN-SDRGVLSSPSLAFTPPIRTLGTPTQPGSTPRVSTMRPLATAYKASTSDYQVISDRQT------PKKDESLVSRAMEYMFG 324
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q66IJ0|NUP35_XENTR (Nucleoporin NUP35 OS=Xenopus tropicalis OX=8364 GN=nup35 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.782e-14
Identity = 51/167 (30.54%), Postives = 83/167 (49.70%), Query Frame = 0 
Query:  174 QRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRN-----SEVSTLKAPARSYYAQNGNSTARQTGGTIA---SPTK--SLVSKIMDLMFG 330
            Q ++L + +  ++ WVTV+GF     + +L +F + G I+KHV    + NWMHI YQ++  A KAL+K+G      +++GVK           E+++      +  P V+N       V T +A +    A    + A      +A   +P K  S+VSK M+ MFG
Sbjct:  164 QGDALTSDDQLDDTWVTVFGFPQASASYILLQFAQYGNIIKHVMS-NNGNWMHIQYQSKLQARKALSKDGRIFGESIMIGVKPCIDKSVMEATEKVSTPTVSSVFTPPVKNIGTPTQSVGTPRAASMRPLAATYKTPASADYQVVADKQAPRKDESIVSKAMEYMFG 329
[Close]
BLAST of Vigan.07G024200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8R4R6|NUP35_MOUSE (Nucleoporin NUP35 OS=Mus musculus OX=10090 GN=Nup35 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.334e-13
Identity = 92/347 (26.51%), Postives = 144/347 (41.50%), Query Frame = 0 
Query:    8 TPRSGRQSLFFQ-----DLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFM---------PL-----PLPSVRNSEVSTLKAPARSYYAQNGNS---TARQTGGTIASPTK--SLVSKIMDLMFG 330
            +P++G  + F       DL +PV+ +   +S P  +  V  +          P P V   +D+S   P   I D   SP + S              TP  ++ +A+ S     +       PG S +SPA               P +  + P  L              Q +SL + +  ++ WVTV+GF     + +L +F + G ILKHV      NWMHI YQ++  A KAL+K+G      +++GVK   P   + + E  +++G +         P+     P  S     VST++  A +Y A   +    + RQT      P K  SLVS+ M+ MFG
Sbjct:   25 SPKTGANAQFLPGFLMGDLPAPVTPQPRSISGP--SVGVMEMRSPLLAGGSPPQPVVPAHKDKSGAPPVRSIYDDISSPGLGS--------------TPLTSRRQANISLLQSPLVGATTPVPGQSMFSPANI-----------GQPRKTTLSPAQLDPF---------YTQGDSLTSEDHLDDTWVTVFGFPQASASYILLQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVK---PCIDKNVMEN-SDRGVLSSPSLAFTTPIRTLGTPTQSGSTPRVSTMRPLATAYKASTSDYQVISDRQT------PKKDESLVSRAMEYMFG 324
[Close]
BLAST of Vigan.07G024200.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:5526593-5528106 REVERSE LENGTH=329)

HSP 1 Score: 489.189 bits (1258), Expect = 3.878e-175
Identity = 242/333 (72.67%), Postives = 274/333 (82.28%), Query Frame = 0 
Query:    1 MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFGSSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFSTPGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQNGNSTARQ-TGGTIASPTKSLVSKIMDLMFGV* 332
            MSA   RTP+SGRQSL FQDLASPVS RRGK SSPGQAAAVSALWRENFG SDLPPPP++TL+DRSDFSPESGI DY  SP+ KSD RTP Q+S +   TPGK K EAS S++L   QQ+QQ S   SWWS + A S  EQD+KGK SPVEGVVQPGAL+TLPPP EVARPEVQR  +P GNL+EEEWVTVYGFSPGDTN+VLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKALNK GM INGV+IVGVK +DP+Q+QALNERLNNQGFMPLP PS   S  +T +  +R  Y QNG++ + Q +GG +ASP+KS+VSK  DLMFGV*
Sbjct:    1 MSAAAHRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMYTLDDRSDFSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQQSQQVSGSPSWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQIIPTGNLDEEEWVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKALNKAGMMINGVVIVGVKPVDPIQKQALNERLNNQGFMPLPPPS---STRNTARPLSRPQYLQNGSAFSPQPSGGAMASPSKSMVSKFFDLMFGV* 330
The following BLAST results are available for this feature:
BLAST of Vigan.07G024200.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-13 (Blastp of Vigna angularis cv. Shumari v1.a1 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3SFM8|A0A0S3SFM8_PHAAN0.000e+0100.00Nuclear pore complex protein NUP35 OS=Vigna angula... [more]
tr|A0A0L9UP68|A0A0L9UP68_PHAAN0.000e+0100.00Nuclear pore complex protein NUP35 OS=Phaseolus an... [more]
tr|A0A1S3TXX0|A0A1S3TXX0_VIGRR0.000e+098.79Nuclear pore complex protein NUP35 OS=Vigna radiat... [more]
tr|A0A4D6N8Z1|A0A4D6N8Z1_VIGUN0.000e+096.98Nuclear pore complex protein NUP35 OS=Vigna unguic... [more]
tr|A0AA86SE71|A0AA86SE71_9FABA0.000e+095.47Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|C6TDQ3|C6TDQ3_SOYBN0.000e+093.35Nuclear pore complex protein NUP35 OS=Glycine max ... [more]
tr|A0A0B2NNX4|A0A0B2NNX4_GLYSO0.000e+093.35Nuclear pore complex protein NUP35 OS=Glycine soja... [more]
tr|V7BXD8|V7BXD8_PHAVU0.000e+093.96Nuclear pore complex protein NUP35 OS=Phaseolus vu... [more]
tr|I1M5H3|I1M5H3_SOYBN0.000e+093.05Nuclear pore complex protein NUP35 OS=Glycine max ... [more]
tr|A0A445IEU8|A0A445IEU8_GLYSO0.000e+093.05Nuclear pore complex protein NUP35 OS=Glycine soja... [more]
back to top
BLAST of Vigan.07G024200.01 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-13 (Blastp of Vigna angularis cv. Shumari v1.a1 proteins vs UniProt Swissprot)
Total hits: 7
Match NameE-valueIdentityDescription
sp|O04326|NUP35_ARATH5.085e-17472.59Nuclear pore complex protein NUP35 OS=Arabidopsis ... [more]
sp|Q6P6X9|NUP35_DANRE6.146e-1631.29Nucleoporin NUP35 OS=Danio rerio OX=7955 GN=nup35 ... [more]
sp|Q8NFH5|NUP35_HUMAN8.625e-1534.48Nucleoporin NUP35 OS=Homo sapiens OX=9606 GN=NUP35... [more]
sp|Q9VWS2|NUP35_DROME2.518e-1434.87Nucleoporin Nup35 OS=Drosophila melanogaster OX=72... [more]
sp|Q68FY1|NUP35_RAT9.047e-1432.95Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN... [more]
sp|Q66IJ0|NUP35_XENTR9.782e-1430.54Nucleoporin NUP35 OS=Xenopus tropicalis OX=8364 GN... [more]
sp|Q8R4R6|NUP35_MOUSE1.334e-1326.51Nucleoporin NUP35 OS=Mus musculus OX=10090 GN=Nup3... [more]
back to top
BLAST of Vigan.07G024200.01 vs. Araport11
Analysis Date: 2024-08-13 (Blastp of Vigna angularis cv. Shumari v1.a1 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
|3.878e-17572.67Symbols: no symbol available | no full name availa... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vigna angularis cv. Shumari genome v1.a1
Date Performed: 2024-08-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.70.330:FF:000095coord: 183..257
e-value: 5.0E-33
score: 114.4
NoneNo IPR availableCDDcd12441RRM_Nup53_likecoord: 186..259
e-value: 1.4782E-37
score: 126.961
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 184..256
e-value: 6.2E-27
score: 95.4
IPR017389Nucleoporin, NUP53PIRSFPIRSF038119NUP53coord: 3..331
e-value: 2.1E-118
score: 388.9
IPR017389Nucleoporin, NUP53PANTHERPTHR21527NUCLEOPORIN NUP35coord: 3..331
IPR007846RNA-recognition motif (RRM) Nup35-type domainPFAMPF05172Nup35_RRMcoord: 183..267
e-value: 1.0E-29
score: 113.6
IPR007846RNA-recognition motif (RRM) Nup35-type domainPROSITEPS51472RRM_NUP35coord: 183..264
score: 32.333744
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 186..261

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigAngu.Shumari.1.0.Vigan.07G024200.01 ID=drVigAngu.Shumari.1.0.Vigan.07G024200.01; Name=Vigan.07G024200.01; organism=Vigna angularis; type=mRNA; length=996bp
ATGAGTGCTACGGTGCAAAGAACTCCAAGGTCCGGGAGGCAGTCTTTATT
TTTCCAGGATTTAGCTTCACCTGTTTCCACCCGTAGAGGAAAAGTTTCAA
GTCCCGGTCAGGCAGCTGCAGTATCTGCACTGTGGCGTGAGAACTTTGGC
AGTTCTGACCTTCCTCCTCCACCTGTTTTCACCTTGGAGGACAGATCAGA
CTTTTCTCCTGAATCAGGCATACTAGATTATCAAGTATCACCTGAGATTA
AGTCAGACACGAGAACTCCTATCCAAACTTCCAATAGGGAATTTTCAACT
CCTGGGAAAAACAAATCTGAGGCTAGCACATCTTATGCTTTGAGAGGGGT
ACAACAAAACCAGCAGACCTCACCGGGTATGAGTTGGTGGTCACCTGCAA
CTGCAAAGAGTGGTGGGGAACAAGATGAGAAGGGAAAAAGTTCACCAGTT
GAGGGTGTGGTTCAGCCTGGTGCTTTGATAACTCTTCCTCCACCGCTGGA
AGTGGCAAGGCCTGAGGTTCAGAGGAATTCGTTGCCAGCTGGGAATCTCA
ATGAGGAAGAATGGGTAACTGTATATGGGTTTTCACCAGGTGATACTAAC
ATGGTTTTAAGAGAGTTTGAAAAATGTGGTGAAATTTTGAAACATGTTCC
TGGTCCTAGAGATGCTAACTGGATGCACATTTTGTATCAGAATCGATCCG
ATGCACATAAAGCTCTTAACAAGAATGGAATGCAAATTAATGGAGTACTA
ATTGTTGGTGTGAAACTGTTGGATCCCATGCAACGCCAAGCTTTAAATGA
AAGGCTTAATAATCAAGGATTTATGCCCTTACCTCTACCCTCTGTTAGAA
ATTCAGAAGTGAGCACATTGAAAGCGCCTGCTCGATCTTACTATGCGCAG
AATGGCAACTCCACTGCACGGCAGACCGGAGGAACCATTGCTTCCCCAAC
AAAATCTTTGGTGTCCAAAATCATGGACTTGATGTTTGGAGTCTAA
back to top

protein sequence of drVigAngu.Shumari.1.0.Vigan.07G024200.01

>drVigAngu.Shumari.1.0.Vigan.07G024200.01 ID=drVigAngu.Shumari.1.0.Vigan.07G024200.01; Name=drVigAngu.Shumari.1.0.Vigan.07G024200.01; organism=Vigna angularis; type=polypeptide; length=332bp
MSATVQRTPRSGRQSLFFQDLASPVSTRRGKVSSPGQAAAVSALWRENFG
SSDLPPPPVFTLEDRSDFSPESGILDYQVSPEIKSDTRTPIQTSNREFST
PGKNKSEASTSYALRGVQQNQQTSPGMSWWSPATAKSGGEQDEKGKSSPV
EGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTN
MVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVL
IVGVKLLDPMQRQALNERLNNQGFMPLPLPSVRNSEVSTLKAPARSYYAQ
NGNSTARQTGGTIASPTKSLVSKIMDLMFGV*
back to top

mRNA from alignment at Chr07:1669452..1672573-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigAngu.Shumari.1.0.Vigan.07G024200.01 ID=drVigAngu.Shumari.1.0.Vigan.07G024200.01; Name=Vigan.07G024200.01; organism=Vigna angularis; type=mRNA; length=3122bp; location=Sequence derived from: Chr07:1669452..1672573- (Vigna angularis
CTATTATTTTGCTCTCTTTTTCCTTGGTTCAAGTTTCCAGGGTAAATGAA
AAGAAAATTTGAATTAGTAGATAAATTTCTTAGGTTCTGACATGTGCCAT
TTCTCATTCCTCATACTGAGGAACCGAGACATAGTCTTACCTCAGTTCTT
TAAGCCAATTTGATTTCAATGCATCTGTTCTGTCTGCTTGTTTGCAGGTA
CTGATTCCATTGTTAAAAATATAACATGAGTGCTACGGTGCAAAGAACTC
CAAGGTCCGGGAGGCAGTCTTTATTTTTCCAGGATTTAGCTTCACCTGTT
TCCACCCGTAGAGGAAAAGTTTCAAGTCCCGGTCAGGCAGCTGCAGTATC
TGCACTGTGGCGTGAGAACTTTGGCAGTTCTGACCTTCCTCCTCCACCTG
TTTTCACCTTGGAGGACAGATCAGACTTTTCTCCTGAATCAGGCATACTA
GATTATCAAGTATCACCTGAGATTAAGTCAGACACGAGAACTCCTATCCA
AACTTCCAATAGGGAATTTTCAACTCCTGGGAAAAACAAATCTGAGGCTA
GCACATCTTATGCTTTGAGAGGGGTACAACAAAACCAGCAGACCTCACCG
GGTATGAGTTGGTGGTCACCTGCAACTGCAAAGAGTGGTGGGGAACAAGA
TGAGAAGGGAAAAAGTTCACCAGTTGAGGGTGTGGTTCAGCCTGGTGCTT
TGATAACTCTTCCTCCACCGCTGGAAGTGGCAAGGCCTGAGGTTCAGAGG
AATTCGTTGCCAGCTGGGAATCTCAATGAGGAAGAATGGGTAACTGTATA
TGGGTATGTCTTAACTTTGCTTTAGCATTTATGTTTGTCTATTTTTGGGG
AATACATGCATTCCACTACAAATCTATGATTGTCCTTTGAATTCTACCCA
ATTTACTTCTATCTTACTTAAAATTGTGTGAACAATATCCGCATAGATTT
TTACTTCTGTACTCCTAAAAGATCAAGAAAACTTGCTCCAAACGCTGGAG
TATAACCCTGCTCCTTAAGCACAGAAAGATCTTATTCCAATTGCCAAGAC
TGCTTTGCAATGCATTTGGTGAGAAAAAACTTACAACTATTTCTGATTAA
GAATGACTAATCTTGCAAGATTGTGCAATATTAGTAGGGGAAAAACTGTG
GTGTACTATGAAAGTTTGTAATATTTCATTACTGTTATTCTAACTTCCTA
CAAGGAATTTTAGTAGAGGTTTTTTATTCTCGTTGTTTTAAAATTGTTAG
TATAAGATGAAAAATCCTGTGATTGCCAAGGGAGTTAGTAGAAAATGTTG
CTGGCGTAATTTACCTCAAATTCTCAGTGAGGATTGAATTCCTTCTTCTA
TAAAATTTCATTTTTGGATATCTGGTGGAGAACTATTGGTAATTCTAGGA
AGGCTGCAATTGGATTACCTTGTGTGCATGTGACAGTAATATAGGAGTAA
ATGGCCTTGAGGCACTAGACAACCACGTGGACAGTGTGGTAGTTAGCTGA
AAGGAAAATTCGCTATGGGAATACCAATGTGGTGGAGGAGGACAGAGGAA
GTAGTGAATTTTGTTCAAGATTATTTGAAAGAGAAAAAGGGGGAGAGAGG
GAGGGTAGACAAAGAGGGCCATTGGGGAATATTAAAGGGATAAAATAGAA
AAAGAGTTAAGAGTAGTTGTGGTGATTACATATAGAAGTACATGAACTGT
GGTGTAATGTGGAGAGAGGTGTGGAATAACTCACAAGAATTTGACAGTGA
CCTTGTTGGTGAGGCATTGACCGTTTTCTATAATATATCTAGTGTTTTAT
TTACTTGAAATTTGTGGGGTGATGGGATACACATCATATATATTTCACTT
GCTTGTATTCACTCTCAGACCTAAAACACATTCATACTCATTTCTTGCAA
TACTTGACCTTGATGCTTTTTTTATACATACCTTTTTATCCAGTTCTATG
ATTTTCCCTTCTCATGTATTTCGATGGTGAAAATAATACCTTGGCTTCAC
TGTCTGTCACACAAATCTCTGAAAAAGAAATCAAAGGACATTTTTAAAGT
AAAATGAACCTTGCAGAGTTTAATTTTGTATTTATATATAGCAATATGCG
TTTTTTTAACAATGCTCTTTTTCTGCAGGTTTTCACCAGGTGATACTAAC
ATGGTTTTAAGAGAGTTTGAAAAATGTGGTGAAATTTTGAAACATGTTCC
TGGTCCTAGAGATGCTAACTGGATGCACATTTTGTATCAGGTTGGCAATC
TTTTCCTTGCGTGAATGTAATTATTTTTTTCGTTATAAATCAATAGTTAT
ATTTTATTCCAAGACTATCCCTGTGCTTGTTGTTGTCATTTTTTTGATAT
ATTAAGAAGTGATTCCATTTTTGAACCTTGCTATACTCTCTTTCAAAGTG
ATTTTCTATTGTTTGTCAACCAACTTGATTTATTGCTGATACAGAATCGA
TCCGATGCACATAAAGCTCTTAACAAGAATGGAATGCAAATTAATGGAGT
ACTAATTGTTGGTGTGAAACTGTTGGATCCCATGCAACGCCAAGCTTTAA
ATGAAAGGCTTAATAATCAAGGATTTATGCCCTTACCTCTACCCTCTGTT
AGAAATTCAGAAGTGAGCACATTGAAAGCGCCTGCTCGATCTTACTATGC
GCAGAATGGCAACTCCACTGCACGGCAGACCGGAGGAACCATTGCTTCCC
CAACAAAATCTTTGGTGTCCAAAATCATGGACTTGATGTTTGGAGTCTAA
ATTAGCTGTTCAGCTGAATCAAATTAAGTATCGTTCTGTTTTGTTGTAAG
CAATGATTTTACTTTCTTCGTACACCTTGAAGAAGTTCGGCATGTCTTGT
TCATTGGATTGAGTTGGAATATATACTCTATGGATCTCAATTGTTAGAAT
TTGTGGCATTTGAGTGTATCAATTTTATCAATAACTACACTACACAGATC
AGTGCTCCTGTGTTTTGAGAAACGAGAACACAATATATAACTAAATGTCG
ATGTAAGTCTGATGATTGTCCATGCACTTGAGATTTTTTGTTATAGCATA
ATGTTTGATTCATGGTTCGATCTGACGCAATGGGATAAAAGACTTTGGTT
GTTTTTTTGTCCAGGAACCTAT
back to top

Coding sequence (CDS) from alignment at Chr07:1669452..1672573-

>drVigAngu.Shumari.1.0.Vigan.07G024200.01 ID=drVigAngu.Shumari.1.0.Vigan.07G024200.01; Name=Vigan.07G024200.01; organism=Vigna angularis; type=CDS; length=996bp; location=Sequence derived from: Chr07:1669452..1672573- (Vigna angularis
ATGAGTGCTACGGTGCAAAGAACTCCAAGGTCCGGGAGGCAGTCTTTATT
TTTCCAGGATTTAGCTTCACCTGTTTCCACCCGTAGAGGAAAAGTTTCAA
GTCCCGGTCAGGCAGCTGCAGTATCTGCACTGTGGCGTGAGAACTTTGGC
AGTTCTGACCTTCCTCCTCCACCTGTTTTCACCTTGGAGGACAGATCAGA
CTTTTCTCCTGAATCAGGCATACTAGATTATCAAGTATCACCTGAGATTA
AGTCAGACACGAGAACTCCTATCCAAACTTCCAATAGGGAATTTTCAACT
CCTGGGAAAAACAAATCTGAGGCTAGCACATCTTATGCTTTGAGAGGGGT
ACAACAAAACCAGCAGACCTCACCGGGTATGAGTTGGTGGTCACCTGCAA
CTGCAAAGAGTGGTGGGGAACAAGATGAGAAGGGAAAAAGTTCACCAGTT
GAGGGTGTGGTTCAGCCTGGTGCTTTGATAACTCTTCCTCCACCGCTGGA
AGTGGCAAGGCCTGAGGTTCAGAGGAATTCGTTGCCAGCTGGGAATCTCA
ATGAGGAAGAATGGGTAACTGTATATGGGTTTTCACCAGGTGATACTAAC
ATGGTTTTAAGAGAGTTTGAAAAATGTGGTGAAATTTTGAAACATGTTCC
TGGTCCTAGAGATGCTAACTGGATGCACATTTTGTATCAGAATCGATCCG
ATGCACATAAAGCTCTTAACAAGAATGGAATGCAAATTAATGGAGTACTA
ATTGTTGGTGTGAAACTGTTGGATCCCATGCAACGCCAAGCTTTAAATGA
AAGGCTTAATAATCAAGGATTTATGCCCTTACCTCTACCCTCTGTTAGAA
ATTCAGAAGTGAGCACATTGAAAGCGCCTGCTCGATCTTACTATGCGCAG
AATGGCAACTCCACTGCACGGCAGACCGGAGGAACCATTGCTTCCCCAAC
AAAATCTTTGGTGTCCAAAATCATGGACTTGATGTTTGGAGTCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR017389Nucleoporin_NUP53
IPR007846RRM_NUP35_dom
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0017056structural constituent of nuclear pore
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0006913nucleocytoplasmic transport
Vocabulary: Cellular Component
TermDefinition
GO:0031965nuclear membrane