Vigan.08G240200.01

Transcript Overview
NameVigan.08G240200.01
Unique NamedrVigAngu.Shumari.1.0.Vigan.08G240200.01
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length546
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr08chromosomeChr08:22972688..22974681 -Vigna angularis cv. Shumari genome v1.a1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vasvvaR719Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvvaR736Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvvaR778Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvvaR792Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvasL129Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvasL271Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvasL340Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvasL0509Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvasL410Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvasL0785Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvasL0974Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvasL0981Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvasL1294Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvasL1368Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carvasL091Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvasL106Pisum sativum Cameor genome v1aPisum sativum
vasvasL094Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasL088Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
carvasL256Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvasL253Pisum sativum Cameor genome v1aPisum sativum
vasvasL242Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvasL283Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvasL377Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvasL675Pisum sativum Cameor genome v1aPisum sativum
pvvasL639Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvasL715Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vasvfhR686Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vasvfhR729Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vasvfhR769Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vasvrvR533Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vasvrvR564Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vasvrvR583Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vasvssR756Vicia sativa cv. Studenica genome v1.0Vicia sativa
vasvuR552Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vasvssR766Vicia sativa cv. Studenica genome v1.0Vicia sativa
vasvuR583Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vasvuR585Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vasvstR581Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvstR612Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvssR829Vicia sativa cv. Studenica genome v1.0Vicia sativa
vasvumR536Vigna umbellata FF25 genome v1.0Vigna umbellata
vasvumR538Vigna umbellata FF25 genome v1.0Vigna umbellata
vasvstR626Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvstR648Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvumR588Vigna umbellata FF25 genome v1.0Vigna umbellata
vasvumR603Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_014656796.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun07g114000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat6g169800.1Pisum sativum Cameor genome v1aPisum sativum
Phvul.007G168400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.3g105280.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
XM_058914242.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_08G01858.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg2570.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.Ca_v2.0_09219Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
rna-TanjilR_11488Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigst.08G162300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Va02G041170.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigan.08G240200drVigAngu.Shumari.1.0.Vigan.08G240200Vigna angularisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
nbis-exon-115876drVigAngu.Shumari.1.0.nbis-exon-115876Vigna angularisexon
nbis-exon-115877drVigAngu.Shumari.1.0.nbis-exon-115877Vigna angularisexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
three_prime_utr-23986drVigAngu.Shumari.1.0.three_prime_utr-23986Vigna angularisthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-108563drVigAngu.Shumari.1.0.cds-108563Vigna angularisCDS
cds-108562drVigAngu.Shumari.1.0.cds-108562Vigna angularisCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
five_prime_utr-25188drVigAngu.Shumari.1.0.five_prime_utr-25188Vigna angularisfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigAngu.Shumari.1.0.Vigan.08G240200.01drVigAngu.Shumari.1.0.Vigan.08G240200.01Vigna angularispolypeptide
drVigAngu.Shumari.1.0.Vigan.08G240200.01drVigAngu.Shumari.1.0.Vigan.08G240200.01-proteinVigna angularispolypeptide


Homology
[Close]
BLAST of Vigan.08G240200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SS35|A0A0S3SS35_PHAAN (MBD domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G240200 PE=4 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 3.021e-130
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 
Query:    1 MKEMKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV 181
            MKEMKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV
Sbjct:    1 MKEMKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV 181
[Close]
BLAST of Vigan.08G240200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0KV31|A0A8T0KV31_PHAAN (Methyl-CpG-binding domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0250780 PE=4 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 3.021e-130
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 
Query:    1 MKEMKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV 181
            MKEMKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV
Sbjct:    1 MKEMKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV 181
[Close]
BLAST of Vigan.08G240200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3V273|A0A1S3V273_VIGRR (Methyl-CpG-binding domain-containing protein 4 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106770942 PE=4 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 2.840e-128
Identity = 177/181 (97.79%), Postives = 181/181 (100.00%), Query Frame = 0 
Query:    1 MKEMKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV 181
            MKEMKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSC+EPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEI+EQ+DSA+KKAKIAKGDV
Sbjct:    1 MKEMKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCDEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIVEQRDSASKKAKIAKGDV 181
[Close]
BLAST of Vigan.08G240200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6N1Q0|A0A4D6N1Q0_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g1906 PE=4 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 9.815e-124
Identity = 169/178 (94.94%), Postives = 176/178 (98.88%), Query Frame = 0 
Query:    4 MKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV 181
            MKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEE+RSKATEEPF+CSRK NCSC+EPADIEYDSTRTWVIDKPNLPKTPQGF+RSLVLRKDYSKLDAYY+TPSGKKLRTRNEIGAFLKDNPEFKGV+V DFDFSSPKIMQDTIPEI+EQKDSANKKAKIAKGDV
Sbjct:    1 MKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEIRSKATEEPFICSRKDNCSCDEPADIEYDSTRTWVIDKPNLPKTPQGFKRSLVLRKDYSKLDAYYITPSGKKLRTRNEIGAFLKDNPEFKGVTVADFDFSSPKIMQDTIPEIVEQKDSANKKAKIAKGDV 178
[Close]
BLAST of Vigan.08G240200.01 vs. ExPASy TrEMBL (2024)
Match: tr|V7BI48|V7BI48_PHAVU (MBD domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G168400g PE=4 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 1.001e-122
Identity = 168/181 (92.82%), Postives = 177/181 (97.79%), Query Frame = 0 
Query:    1 MKEMKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV 181
            M +MKG QEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRV+DTQEEFEEVRSKATEEPFVCSRKAN SC+EPADIEYDSTRTWVIDKPNLPKTPQGF+RSLVLRKDYSKLDAYY+TPSGKKLRTRNEIGAFLKDNP+FKGV+V DFDFSSPKIMQDTIPEI+EQKDS+NKKAKIAKGDV
Sbjct:    1 MNDMKGGQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVMDTQEEFEEVRSKATEEPFVCSRKANGSCDEPADIEYDSTRTWVIDKPNLPKTPQGFKRSLVLRKDYSKLDAYYITPSGKKLRTRNEIGAFLKDNPDFKGVTVADFDFSSPKIMQDTIPEIVEQKDSSNKKAKIAKGDV 181
[Close]
BLAST of Vigan.08G240200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86VMF4|A0AA86VMF4_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS22121 PE=4 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 6.511e-117
Identity = 159/181 (87.85%), Postives = 172/181 (95.03%), Query Frame = 0 
Query:    1 MKEMKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV 181
            M EMKG+QEISKTPS+S+RT S QGSVDIYAAQCK CLKWRV++TQEEFEEVRSKAT+EPF+CS+KANCSC+EP DIEYDSTRTWVIDKPNLPKTPQGF RSLVLRKDYSKLDAYY+TP+GKKLRTRNEIGAFLKDNPEF+GVSVTDFDFSSPKIMQDTIPEIIEQKDS+NKK KI K DV
Sbjct:    1 MNEMKGAQEISKTPSTSRRTQSKQGSVDIYAAQCKTCLKWRVMNTQEEFEEVRSKATDEPFLCSKKANCSCDEPGDIEYDSTRTWVIDKPNLPKTPQGFTRSLVLRKDYSKLDAYYITPAGKKLRTRNEIGAFLKDNPEFQGVSVTDFDFSSPKIMQDTIPEIIEQKDSSNKKLKITKADV 181
[Close]
BLAST of Vigan.08G240200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9TWS0|A0A0L9TWS0_PHAAN (MBD domain-containing protein (Fragment) OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g112500 PE=4 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 3.002e-116
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 
Query:   20 TLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV 181
            TLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV
Sbjct:    1 TLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV 162
[Close]
BLAST of Vigan.08G240200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0F9P8|A0A3Q0F9P8_VIGRR (Methyl-CpG-binding domain-containing protein 4 isoform X3 OS=Vigna radiata var. radiata OX=3916 GN=LOC106770942 PE=4 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 1.858e-115
Identity = 160/164 (97.56%), Postives = 164/164 (100.00%), Query Frame = 0 
Query:   18 KRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV 181
            KRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSC+EPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEI+EQ+DSA+KKAKIAKGDV
Sbjct:    5 KRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCDEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIVEQRDSASKKAKIAKGDV 168
[Close]
BLAST of Vigan.08G240200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3V1R7|A0A1S3V1R7_VIGRR (Methyl-CpG-binding domain-containing protein 4 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106770942 PE=4 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 4.837e-115
Identity = 159/163 (97.55%), Postives = 163/163 (100.00%), Query Frame = 0 
Query:   19 RTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV 181
            RTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSC+EPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEI+EQ+DSA+KKAKIAKGDV
Sbjct:    7 RTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCDEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIVEQRDSASKKAKIAKGDV 169
[Close]
BLAST of Vigan.08G240200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371H994|A0A371H994_MUCPR (Methyl-CpG-binding domain-containing protein 4 (Fragment) OS=Mucuna pruriens OX=157652 GN=MBD4 PE=4 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 6.206e-115
Identity = 158/178 (88.76%), Postives = 168/178 (94.38%), Query Frame = 0 
Query:    4 MKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEIIEQKDSANKKAKIAKGDV 181
            MK +QEIS+TPS+SKRTLSSQGSVDIYAAQCK+CLKWRVIDT EEFEE+RSK TEEPF+CSRKAN SCEEP DIEYDSTRTWVIDKPNLPKTPQGF+RSLVLRKDYSKLDAYY+TP+GKKLRTRNEI AFLKDNPEFK VS+TDFDF SPKIMQDTIPEIIEQKDSANKK KIAK DV
Sbjct:    1 MKAAQEISRTPSTSKRTLSSQGSVDIYAAQCKDCLKWRVIDTAEEFEEIRSKVTEEPFLCSRKANSSCEEPGDIEYDSTRTWVIDKPNLPKTPQGFKRSLVLRKDYSKLDAYYITPAGKKLRTRNEIAAFLKDNPEFKDVSITDFDFGSPKIMQDTIPEIIEQKDSANKKIKIAKDDV 178
[Close]
BLAST of Vigan.08G240200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LYB9|MBD4_ARATH (Methyl-CpG-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=MBD4 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 1.998e-70
Identity = 98/159 (61.64%), Postives = 124/159 (77.99%), Query Frame = 0 
Query:    4 MKGSQEISKTPSSSKRTLSSQGS-VDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIP 161
            MK  +EI K      +   + G  +D YAAQC NC KWRVID+QEE+E++RSK  E+PF C +K   SCEEPADI+YDS+RTWVIDKP LPKTP+GF+RSLVLRKDYSK+D YY TP+GKKLR+RNEI AF++ NPEF+   + DF+F+ PK+M+DT+P
Sbjct:    1 MKEEEEIGKPAKPKAKKDVAPGRLIDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQKKQGMSCEEPADIDYDSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTGKKLRSRNEIAAFVEANPEFRNAPLGDFNFTVPKVMEDTVP 159
[Close]
BLAST of Vigan.08G240200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5XEN5|MBD1_ARATH (Methyl-CpG-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=MBD1 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.016e-62
Identity = 80/139 (57.55%), Postives = 113/139 (81.29%), Query Frame = 0 
Query:   26 SVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEII 164
            S+D++A QC+ C+KWR IDTQ+E+E++RS+  E+PF C  K   SCE+  D+ YDS+RTWVIDKP LP+TP+GF+RSL+LRKDYSK+DAYY+TP+GKKL++RNEI AF+  N ++K   + DF+F+ PK+M++T+P  I
Sbjct:   51 SIDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFCKTKEGVSCEDVGDLNYDSSRTWVIDKPGLPRTPRGFKRSLILRKDYSKMDAYYITPTGKKLKSRNEIAAFIDANQDYKYALLGDFNFTVPKVMEETVPSGI 189
[Close]
BLAST of Vigan.08G240200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8LA53|MBD2_ARATH (Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=MBD2 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.426e-33
Identity = 59/141 (41.84%), Postives = 86/141 (60.99%), Query Frame = 0 
Query:   26 SVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSR----KANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSK--LDAYYVTPSGKKLRTRNEIGAFLKDNPEF--KGVSVTDFDFSSPKIMQD 158
            S+  +  QC +C KWR++ + +++EE+R +  E PF C      K + SC+ PADI  D TR W IDKPN+ + P G++R L +R +      D YYV PSGKKLR+  E+  +L DN E+  +GV ++ F F  PK +QD
Sbjct:   55 SIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQD 195
[Close]
BLAST of Vigan.08G240200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q4PSK1|MBD3_ARATH (Methyl-CpG-binding domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=MBD3 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.506e-28
Identity = 55/131 (41.98%), Postives = 84/131 (64.12%), Query Frame = 0 
Query:   27 VDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPAD--IEYDS-TRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYY--VTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSS 152
            +D YAAQC  CLK R I++QE++EE+RSK  E+ F C R     CEEP D  + +DS T  W  D+ ++PKTPQG +R LV+R +  K+D YY  + P  K+ ++  E+  F++D  EFK +++ +  F++
Sbjct:    9 IDSYAAQCWKCLKVRSIESQEDYEEIRSKTLEKFFECKR-----CEEPGDMVMNFDSLTMRWFQDEHSIPKTPQGLKRVLVVRTNCVKVDVYYESLAPRRKRFKSIKEVATFIEDKEEFKDMTLEEVSFAA 134
[Close]
BLAST of Vigan.08G240200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FZP6|MBD12_ARATH (Putative methyl-CpG-binding domain protein 12 OS=Arabidopsis thaliana OX=3702 GN=MBD12 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.221e-20
Identity = 46/134 (34.33%), Postives = 75/134 (55.97%), Query Frame = 0 
Query:   32 AQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKA----NCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKL-DAYYVTPSGKKLRTRNEIGAFLKDNPEF--KGVSVTDFDFSSPKIMQD 158
             QC +C KWR+I + + +  ++    + PFVC   +    N SC  P D    +  TW    P++P  P G+ RS+ +R + +K  D YY  PSG++LR+  E+ +FL ++PE+  +GV+ + F F  PK + D
Sbjct:    2 VQCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVPQDGT--TCDTW----PSIPPIPTGWSRSVHIRSESTKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVREGVNRSQFSFQIPKPLDD 129
[Close]
BLAST of Vigan.08G240200.01 vs. Araport11
Match: | (Symbols: MBD4 | methyl-CPG-binding domain 4 | chr3:23295394-23296425 FORWARD LENGTH=186)

HSP 1 Score: 214.542 bits (545), Expect = 2.086e-71
Identity = 98/159 (61.64%), Postives = 124/159 (77.99%), Query Frame = 0 
Query:    4 MKGSQEISKTPSSSKRTLSSQGS-VDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIP 161
            MK  +EI K      +   + G  +D YAAQC NC KWRVID+QEE+E++RSK  E+PF C +K   SCEEPADI+YDS+RTWVIDKP LPKTP+GF+RSLVLRKDYSK+D YY TP+GKKLR+RNEI AF++ NPEF+   + DF+F+ PK+M+DT+P
Sbjct:    1 MKEEEEIGKPAKPKAKKDVAPGRLIDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQKKQGMSCEEPADIDYDSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTGKKLRSRNEIAAFVEANPEFRNAPLGDFNFTVPKVMEDTVP 159
[Close]
BLAST of Vigan.08G240200.01 vs. Araport11
Match: | (Symbols: MBD1 | methyl-CPG-binding domain 1 | chr4:11947421-11948514 REVERSE LENGTH=204)

HSP 1 Score: 195.667 bits (496), Expect = 1.060e-63
Identity = 80/139 (57.55%), Postives = 113/139 (81.29%), Query Frame = 0 
Query:   26 SVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSSPKIMQDTIPEII 164
            S+D++A QC+ C+KWR IDTQ+E+E++RS+  E+PF C  K   SCE+  D+ YDS+RTWVIDKP LP+TP+GF+RSL+LRKDYSK+DAYY+TP+GKKL++RNEI AF+  N ++K   + DF+F+ PK+M++T+P  I
Sbjct:   51 SIDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFCKTKEGVSCEDVGDLNYDSSRTWVIDKPGLPRTPRGFKRSLILRKDYSKMDAYYITPTGKKLKSRNEIAAFIDANQDYKYALLGDFNFTVPKVMEETVPSGI 189
[Close]
BLAST of Vigan.08G240200.01 vs. Araport11
Match: | (Symbols: ATMBD2, MBD02, MBD2 | METHYL-CPG-BINDING DOMAIN PROTEIN 2, methyl-CPG-binding domain protein 02 | chr5:13523725-13525270 REVERSE LENGTH=272)

HSP 1 Score: 123.25 bits (308), Expect = 1.475e-34
Identity = 59/141 (41.84%), Postives = 86/141 (60.99%), Query Frame = 0 
Query:   26 SVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSR----KANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSK--LDAYYVTPSGKKLRTRNEIGAFLKDNPEF--KGVSVTDFDFSSPKIMQD 158
            S+  +  QC +C KWR++ + +++EE+R +  E PF C      K + SC+ PADI  D TR W IDKPN+ + P G++R L +R +      D YYV PSGKKLR+  E+  +L DN E+  +GV ++ F F  PK +QD
Sbjct:   55 SIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQD 195
[Close]
BLAST of Vigan.08G240200.01 vs. Araport11
Match: | (Symbols: ATMBD2, MBD02, MBD2 | METHYL-CPG-BINDING DOMAIN PROTEIN 2, methyl-CPG-binding domain protein 02 | chr5:13523725-13525270 REVERSE LENGTH=272)

HSP 1 Score: 123.25 bits (308), Expect = 1.475e-34
Identity = 59/141 (41.84%), Postives = 86/141 (60.99%), Query Frame = 0 
Query:   26 SVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSR----KANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSK--LDAYYVTPSGKKLRTRNEIGAFLKDNPEF--KGVSVTDFDFSSPKIMQD 158
            S+  +  QC +C KWR++ + +++EE+R +  E PF C      K + SC+ PADI  D TR W IDKPN+ + P G++R L +R +      D YYV PSGKKLR+  E+  +L DN E+  +GV ++ F F  PK +QD
Sbjct:   55 SIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQD 195
[Close]
BLAST of Vigan.08G240200.01 vs. Araport11
Match: | (Symbols: ATMBD2, MBD02, MBD2 | METHYL-CPG-BINDING DOMAIN PROTEIN 2, methyl-CPG-binding domain protein 02 | chr5:13523725-13525270 REVERSE LENGTH=272)

HSP 1 Score: 123.25 bits (308), Expect = 1.475e-34
Identity = 59/141 (41.84%), Postives = 86/141 (60.99%), Query Frame = 0 
Query:   26 SVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSR----KANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSK--LDAYYVTPSGKKLRTRNEIGAFLKDNPEF--KGVSVTDFDFSSPKIMQD 158
            S+  +  QC +C KWR++ + +++EE+R +  E PF C      K + SC+ PADI  D TR W IDKPN+ + P G++R L +R +      D YYV PSGKKLR+  E+  +L DN E+  +GV ++ F F  PK +QD
Sbjct:   55 SIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQD 195
[Close]
BLAST of Vigan.08G240200.01 vs. Araport11
Match: | (Symbols: ATMBD2, MBD02, MBD2 | METHYL-CPG-BINDING DOMAIN PROTEIN 2, methyl-CPG-binding domain protein 02 | chr5:13523725-13525270 REVERSE LENGTH=272)

HSP 1 Score: 123.25 bits (308), Expect = 1.475e-34
Identity = 59/141 (41.84%), Postives = 86/141 (60.99%), Query Frame = 0 
Query:   26 SVDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSR----KANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSK--LDAYYVTPSGKKLRTRNEIGAFLKDNPEF--KGVSVTDFDFSSPKIMQD 158
            S+  +  QC +C KWR++ + +++EE+R +  E PF C      K + SC+ PADI  D TR W IDKPN+ + P G++R L +R +      D YYV PSGKKLR+  E+  +L DN E+  +GV ++ F F  PK +QD
Sbjct:   55 SIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQD 195
[Close]
BLAST of Vigan.08G240200.01 vs. Araport11
Match: | (Symbols: MBD3 | methyl-CPG-binding domain 3 | chr4:179022-179513 FORWARD LENGTH=163)

HSP 1 Score: 107.071 bits (266), Expect = 1.563e-29
Identity = 55/131 (41.98%), Postives = 84/131 (64.12%), Query Frame = 0 
Query:   27 VDIYAAQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKANCSCEEPAD--IEYDS-TRTWVIDKPNLPKTPQGFRRSLVLRKDYSKLDAYY--VTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDFSS 152
            +D YAAQC  CLK R I++QE++EE+RSK  E+ F C R     CEEP D  + +DS T  W  D+ ++PKTPQG +R LV+R +  K+D YY  + P  K+ ++  E+  F++D  EFK +++ +  F++
Sbjct:    9 IDSYAAQCWKCLKVRSIESQEDYEEIRSKTLEKFFECKR-----CEEPGDMVMNFDSLTMRWFQDEHSIPKTPQGLKRVLVVRTNCVKVDVYYESLAPRRKRFKSIKEVATFIEDKEEFKDMTLEEVSFAA 134
[Close]
BLAST of Vigan.08G240200.01 vs. Araport11
Match: | (Symbols: MBD12 | methyl-CPG-binding domain 12 | chr5:13549343-13550124 REVERSE LENGTH=155)

HSP 1 Score: 85.8853 bits (211), Expect = 2.300e-21
Identity = 46/134 (34.33%), Postives = 75/134 (55.97%), Query Frame = 0 
Query:   32 AQCKNCLKWRVIDTQEEFEEVRSKATEEPFVCSRKA----NCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFRRSLVLRKDYSKL-DAYYVTPSGKKLRTRNEIGAFLKDNPEF--KGVSVTDFDFSSPKIMQD 158
             QC +C KWR+I + + +  ++    + PFVC   +    N SC  P D    +  TW    P++P  P G+ RS+ +R + +K  D YY  PSG++LR+  E+ +FL ++PE+  +GV+ + F F  PK + D
Sbjct:    2 VQCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVPQDGT--TCDTW----PSIPPIPTGWSRSVHIRSESTKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVREGVNRSQFSFQIPKPLDD 129
The following BLAST results are available for this feature:
BLAST of Vigan.08G240200.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-13 (Blastp of Vigna angularis cv. Shumari v1.a1 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3SS35|A0A0S3SS35_PHAAN3.021e-130100.00MBD domain-containing protein OS=Vigna angularis v... [more]
tr|A0A8T0KV31|A0A8T0KV31_PHAAN3.021e-130100.00Methyl-CpG-binding domain-containing protein OS=Ph... [more]
tr|A0A1S3V273|A0A1S3V273_VIGRR2.840e-12897.79Methyl-CpG-binding domain-containing protein 4 iso... [more]
tr|A0A4D6N1Q0|A0A4D6N1Q0_VIGUN9.815e-12494.94Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|V7BI48|V7BI48_PHAVU1.001e-12292.82MBD domain-containing protein OS=Phaseolus vulgari... [more]
tr|A0AA86VMF4|A0AA86VMF4_9FABA6.511e-11787.85Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A0L9TWS0|A0A0L9TWS0_PHAAN3.002e-116100.00MBD domain-containing protein (Fragment) OS=Phaseo... [more]
tr|A0A3Q0F9P8|A0A3Q0F9P8_VIGRR1.858e-11597.56Methyl-CpG-binding domain-containing protein 4 iso... [more]
tr|A0A1S3V1R7|A0A1S3V1R7_VIGRR4.837e-11597.55Methyl-CpG-binding domain-containing protein 4 iso... [more]
tr|A0A371H994|A0A371H994_MUCPR6.206e-11588.76Methyl-CpG-binding domain-containing protein 4 (Fr... [more]
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BLAST of Vigan.08G240200.01 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-13 (Blastp of Vigna angularis cv. Shumari v1.a1 proteins vs UniProt Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9LYB9|MBD4_ARATH1.998e-7061.64Methyl-CpG-binding domain-containing protein 4 OS=... [more]
sp|Q5XEN5|MBD1_ARATH1.016e-6257.55Methyl-CpG-binding domain-containing protein 1 OS=... [more]
sp|Q8LA53|MBD2_ARATH1.426e-3341.84Methyl-CpG-binding domain-containing protein 2 OS=... [more]
sp|Q4PSK1|MBD3_ARATH1.506e-2841.98Methyl-CpG-binding domain-containing protein 3 OS=... [more]
sp|Q9FZP6|MBD12_ARATH2.221e-2034.33Putative methyl-CpG-binding domain protein 12 OS=A... [more]
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BLAST of Vigan.08G240200.01 vs. Araport11
Analysis Date: 2024-08-13 (Blastp of Vigna angularis cv. Shumari v1.a1 proteins vs arabidopsis Araport11)
Total hits: 8
Match NameE-valueIdentityDescription
|2.086e-7161.64Symbols: MBD4 | methyl-CPG-binding domain 4 | chr3... [more]
|1.060e-6357.55Symbols: MBD1 | methyl-CPG-binding domain 1 | chr4... [more]
|1.475e-3441.84Symbols: ATMBD2, MBD02, MBD2 | METHYL-CPG-BINDING ... [more]
|1.475e-3441.84Symbols: ATMBD2, MBD02, MBD2 | METHYL-CPG-BINDING ... [more]
|1.475e-3441.84Symbols: ATMBD2, MBD02, MBD2 | METHYL-CPG-BINDING ... [more]
|1.475e-3441.84Symbols: ATMBD2, MBD02, MBD2 | METHYL-CPG-BINDING ... [more]
|1.563e-2941.98Symbols: MBD3 | methyl-CPG-binding domain 3 | chr4... [more]
|2.300e-2134.33Symbols: MBD12 | methyl-CPG-binding domain 12 | ch... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna angularis cv. Shumari genome v1.a1
Date Performed: 2024-08-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.890.10:FF:000012coord: 80..177
e-value: 8.5E-36
score: 124.0
NoneNo IPR availableGENE3D3.30.40.100coord: 21..78
e-value: 6.3E-6
score: 27.6
NoneNo IPR availableGENE3D3.30.890.10coord: 87..161
e-value: 5.0E-15
score: 57.0
NoneNo IPR availablePANTHERPTHR12396METHYL-CPG BINDING PROTEIN, MBDcoord: 10..161
NoneNo IPR availableCDDcd01396MeCP2_MBDcoord: 89..161
e-value: 4.52479E-20
score: 77.7981
IPR001739Methyl-CpG DNA bindingPFAMPF01429MBDcoord: 88..157
e-value: 1.2E-12
score: 58.6
IPR001739Methyl-CpG DNA bindingPROSITEPS50982MBDcoord: 85..155
score: 15.786256
IPR011124Zinc finger, CW-typePFAMPF07496zf-CWcoord: 30..76
e-value: 9.1E-5
score: 33.7
IPR011124Zinc finger, CW-typePROSITEPS51050ZF_CWcoord: 24..79
score: 11.795186
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 67..160

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigAngu.Shumari.1.0.Vigan.08G240200.01 ID=drVigAngu.Shumari.1.0.Vigan.08G240200.01; Name=Vigan.08G240200.01; organism=Vigna angularis; type=mRNA; length=546bp
ATGAAAGAAATGAAGGGAAGTCAAGAAATCTCAAAAACACCATCCTCTTC
CAAGAGAACATTGTCAAGTCAGGGTTCAGTGGATATATACGCGGCGCAAT
GCAAAAACTGCTTAAAATGGAGAGTGATTGATACACAGGAAGAGTTTGAA
GAGGTTAGAAGTAAAGCCACTGAGGAACCTTTCGTTTGCAGCAGAAAGGC
TAATTGTTCCTGTGAGGAACCTGCTGATATTGAATATGATTCCACTCGAA
CGTGGGTCATTGACAAGCCTAACCTCCCAAAAACTCCACAAGGTTTTAGG
AGGAGCTTGGTACTTAGAAAAGATTACTCCAAATTGGACGCTTACTACGT
CACACCTTCTGGCAAAAAACTGAGAACCCGCAATGAGATAGGAGCGTTTC
TAAAAGATAATCCAGAATTCAAAGGTGTTAGTGTTACAGATTTTGATTTT
TCTTCCCCAAAGATAATGCAGGACACCATACCAGAGATAATTGAGCAGAA
GGATTCTGCTAACAAGAAAGCTAAGATAGCCAAAGGTGATGTTTGA
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protein sequence of drVigAngu.Shumari.1.0.Vigan.08G240200.01

>drVigAngu.Shumari.1.0.Vigan.08G240200.01 ID=drVigAngu.Shumari.1.0.Vigan.08G240200.01; Name=drVigAngu.Shumari.1.0.Vigan.08G240200.01; organism=Vigna angularis; type=polypeptide; length=182bp
MKEMKGSQEISKTPSSSKRTLSSQGSVDIYAAQCKNCLKWRVIDTQEEFE
EVRSKATEEPFVCSRKANCSCEEPADIEYDSTRTWVIDKPNLPKTPQGFR
RSLVLRKDYSKLDAYYVTPSGKKLRTRNEIGAFLKDNPEFKGVSVTDFDF
SSPKIMQDTIPEIIEQKDSANKKAKIAKGDV*
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mRNA from alignment at Chr08:22972688..22974681-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigAngu.Shumari.1.0.Vigan.08G240200.01 ID=drVigAngu.Shumari.1.0.Vigan.08G240200.01; Name=Vigan.08G240200.01; organism=Vigna angularis; type=mRNA; length=1994bp; location=Sequence derived from: Chr08:22972688..22974681- (Vigna angularis
GGAGATGAAAATTGTATGTGGCACATAGAGTTGAAAGGGAAACAACTTAT
GTGAATGAAAGAAATGAAGGGAAGTCAAGAAATCTCAAAAACACCATCCT
CTTCCAAGGTACTTCTCATCTCTTTCTTCAATTAATTTCCTTTCTTTCTC
ATGATTTTGCAGTTAGGGTTTTCCATGCACGAGATCTCCTGCTTTTCAAC
TTTCTTGCTCGATTAATTTTTCTTCACTTTTCATGGATTCACTGTAAATA
ATTGTTTGTTTCTCGGTCAATTTTACTGCTTGTTCTTTGTGTTGTAAGTG
AATCACATTATCCTGTCTGTCATGCAATGACCATTGTTCTATTTAATAAA
GCTACAAAATTGATCATGTTTTTCTTTTTTAATGGGTATTACGTGTGAGT
TGTTCTTCACTCGCCTGTATGTGTTGGTTTAGTGAGTAGGGTTTGGATCC
CTTAAACATATAGAGTTGTGTTTGATTCTGGAATTTACTATTCACGTCTA
TGGAAAAAAAATATAATAGACCTATCCTAGGTATTAAGTGCTCAAATGGG
CTAGGGATGAGATGGGACATCAGAAATTTCAGTAAGTTTAACCAAATTTG
AGGAACTTGGGTGCGACGGGGTTCCACACCTACTTGTACTAATGTTCCCT
AACTTTTCCTGACATTTCAGAAGGAACTCAGATCCTCTGCAAAAATCTGG
ATGATTGATAGATTAACATAATAGTAGTTAAACAAGAGAGAGAATATCAA
TGGTTAATATATCTGCTGCAGAGACAGCAGAGGATCTATGTTCTTTCAGA
AGGTGGTACGCTATTGCTCTGTCCTTGTATGCGCCTGTGGTGGCCCTCGT
GTATATGATATATCAAGAGCTTTATGGCCATGATTTTAGCAGTCAAATTT
GATGGTAGTTATGTAAATCATGTTCCCTGAATTATTCTCAGTTTAGTGAC
CTGGCTGGGGGTATCATTGGCCAGTTCTGTTAACCAATTGATTCATAGTC
CCTCAAGCATAAAGCCTGAAAGTTGTAAGCGCTTGGTGAATTCGGCTTGT
GCAGCAGACAGTTTAGTTAGGAATTGGTATTTGTTTGATAAACTTTTGTA
CATTAAAACTTGCATTACCAACCAATGCTTGATGTTTAGATTGTTTTTCT
GCTGCTACGTCTAAAGTGGTTAGTGTTTGTTTCTACCGTTGAAAGGAATT
AAACTAATAGATTCACTGCACAGACAAAAGTGATTAAAAAATTAAAACTA
AAGTTTGCATATTTGAATGTTGCCAAACAGAGAACATTGTCAAGTCAGGG
TTCAGTGGATATATACGCGGCGCAATGCAAAAACTGCTTAAAATGGAGAG
TGATTGATACACAGGAAGAGTTTGAAGAGGTTAGAAGTAAAGCCACTGAG
GAACCTTTCGTTTGCAGCAGAAAGGCTAATTGTTCCTGTGAGGAACCTGC
TGATATTGAATATGATTCCACTCGAACGTGGGTCATTGACAAGCCTAACC
TCCCAAAAACTCCACAAGGTTTTAGGAGGAGCTTGGTACTTAGAAAAGAT
TACTCCAAATTGGACGCTTACTACGTCACACCTTCTGGCAAAAAACTGAG
AACCCGCAATGAGATAGGAGCGTTTCTAAAAGATAATCCAGAATTCAAAG
GTGTTAGTGTTACAGATTTTGATTTTTCTTCCCCAAAGATAATGCAGGAC
ACCATACCAGAGATAATTGAGCAGAAGGATTCTGCTAACAAGAAAGCTAA
GATAGCCAAAGGTGATGTTTGAGGAATACCATCTCAAGTTTGCATGATGC
AAAGATGTTGATTCTGGTTTGTTTGTTGGATATTACTTTAGAGATTGTTG
TAAAATCAAACCTGACAGCGTATTAAACGAATTTTGTTCATGCCCTTGTA
TTATATTCTAATTTTAATTTTAATGTTAATGTTGTTATCAGGCTTAAAAT
TAACCCAAATTTACTGCAACATTTACGGTTTACAAACATCAAAT
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Coding sequence (CDS) from alignment at Chr08:22972688..22974681-

>drVigAngu.Shumari.1.0.Vigan.08G240200.01 ID=drVigAngu.Shumari.1.0.Vigan.08G240200.01; Name=Vigan.08G240200.01; organism=Vigna angularis; type=CDS; length=546bp; location=Sequence derived from: Chr08:22972688..22974681- (Vigna angularis
ATGAAAGAAATGAAGGGAAGTCAAGAAATCTCAAAAACACCATCCTCTTC
CAAGAGAACATTGTCAAGTCAGGGTTCAGTGGATATATACGCGGCGCAAT
GCAAAAACTGCTTAAAATGGAGAGTGATTGATACACAGGAAGAGTTTGAA
GAGGTTAGAAGTAAAGCCACTGAGGAACCTTTCGTTTGCAGCAGAAAGGC
TAATTGTTCCTGTGAGGAACCTGCTGATATTGAATATGATTCCACTCGAA
CGTGGGTCATTGACAAGCCTAACCTCCCAAAAACTCCACAAGGTTTTAGG
AGGAGCTTGGTACTTAGAAAAGATTACTCCAAATTGGACGCTTACTACGT
CACACCTTCTGGCAAAAAACTGAGAACCCGCAATGAGATAGGAGCGTTTC
TAAAAGATAATCCAGAATTCAAAGGTGTTAGTGTTACAGATTTTGATTTT
TCTTCCCCAAAGATAATGCAGGACACCATACCAGAGATAATTGAGCAGAA
GGATTCTGCTAACAAGAAAGCTAAGATAGCCAAAGGTGATGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001739Methyl_CpG_DNA-bd
IPR011124Znf_CW
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding