Vigst.02G037400.01

Transcript Overview
NameVigst.02G037400.01
Unique NamedrVigStip.JP252948.2.0.Vigst.02G037400.01
TypemRNA
OrganismVigna stipulacea ()
Sequence length630
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr02chromosomeChr02:2877864..2882380 +Vigna stipulacea acc. JP252948 genome v2.a1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vstvvaR277Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvvaR286Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvvaR304Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvvaR321Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvvaR344Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstL0372Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvstL214Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvstL0415Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0426Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0552Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0602Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0605Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvstL502Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvstL0831Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0833Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvstL604Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvstL644Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
pvvstL015Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
carvstL317Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pvvstL300Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvstL450Pisum sativum Cameor genome v1aPisum sativum
carvstL430Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvstL456Pisum sativum Cameor genome v1aPisum sativum
pvvstL418Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvstL591Pisum sativum Cameor genome v1aPisum sativum
carvstL563Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carvstL709Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carvstL786Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pvvstL872Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vstvstL027Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvstL106Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstL104Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vstvstR165Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstL245Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvstL382Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvstL405Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vstvuR198Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvuR207Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvstL459Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vstvuR227Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vssvstL357Vicia sativa cv. Studenica genome v1.0Vicia sativa
vstvuR247Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvumR190Vigna umbellata FF25 genome v1.0Vigna umbellata
vssvstL387Vicia sativa cv. Studenica genome v1.0Vicia sativa
vstvumR226Vigna umbellata FF25 genome v1.0Vigna umbellata
vstvumR236Vigna umbellata FF25 genome v1.0Vigna umbellata
vstvumR251Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvstL561Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvstL556Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvstL549Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvstL567Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvstL760Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vssvstL762Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvstL869Vicia sativa cv. Studenica genome v1.0Vicia sativa
vasvstL043Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvstL134Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvstL232Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvstL298Vigna angularis cv. Shumari genome v1.a1Vigna angularis

Orthologs
Gene/TranscriptAssemblySpecies
XM_058930217.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigan.02G044800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
XM_058925195.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigun09g238000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
jg54969.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.2g165520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
jg54927.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.009G065400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014646963.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat5g043000.1Pisum sativum Cameor genome v1aPisum sativum
Vum_02G00384.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Va04G068130.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_30588Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
XM_058930209.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigst.02G037400drVigStip.JP252948.2.0.Vigst.02G037400Vigna stipulaceagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
nbis-exon-25757drVigStip.JP252948.2.0.nbis-exon-25757Vigna stipulaceaexon
nbis-exon-25758drVigStip.JP252948.2.0.nbis-exon-25758Vigna stipulaceaexon
nbis-exon-25759drVigStip.JP252948.2.0.nbis-exon-25759Vigna stipulaceaexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
five_prime_utr-4002drVigStip.JP252948.2.0.five_prime_utr-4002Vigna stipulaceafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-24899drVigStip.JP252948.2.0.cds-24899Vigna stipulaceaCDS
cds-24900drVigStip.JP252948.2.0.cds-24900Vigna stipulaceaCDS
cds-24901drVigStip.JP252948.2.0.cds-24901Vigna stipulaceaCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
three_prime_utr-3803drVigStip.JP252948.2.0.three_prime_utr-3803Vigna stipulaceathree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigStip.JP252948.2.0.Vigst.02G037400.01drVigStip.JP252948.2.0.Vigst.02G037400.01Vigna stipulaceapolypeptide
drVigStip.JP252948.2.0.Vigst.02G037400.01drVigStip.JP252948.2.0.Vigst.02G037400.01-proteinVigna stipulaceapolypeptide


Homology
[Close]
BLAST of Vigst.02G037400.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RAS0|A0A0S3RAS0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G044800 PE=4 SV=1)

HSP 1 Score: 425.246 bits (1092), Expect = 2.406e-150
Identity = 207/209 (99.04%), Postives = 208/209 (99.52%), Query Frame = 0 
Query:    1 MALPSLLPKTAPHLLSLTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAASSAGDSLRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 209
            MALPSLLPKTAPHLL LTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAASSAGDSLRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQ+VDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL
Sbjct:    1 MALPSLLPKTAPHLLPLTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAASSAGDSLRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQVVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 209
[Close]
BLAST of Vigst.02G037400.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0KMZ2|A0A8T0KMZ2_PHAAN (Protein DCL-like protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0095880 PE=4 SV=1)

HSP 1 Score: 425.246 bits (1092), Expect = 2.406e-150
Identity = 207/209 (99.04%), Postives = 208/209 (99.52%), Query Frame = 0 
Query:    1 MALPSLLPKTAPHLLSLTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAASSAGDSLRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 209
            MALPSLLPKTAPHLL LTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAASSAGDSLRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQ+VDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL
Sbjct:    1 MALPSLLPKTAPHLLPLTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAASSAGDSLRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQVVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 209
[Close]
BLAST of Vigst.02G037400.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3U8Z7|A0A1S3U8Z7_VIGRR (Protein DCL homolog, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=LOC106762865 PE=4 SV=1)

HSP 1 Score: 422.55 bits (1085), Expect = 3.171e-149
Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 0 
Query:    1 MALPSLLPKTAPHLLSLTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAASSAGDSLRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 209
            MALPSLLPKTAPHLL  TNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAASSAGDS RSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQ+VDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL
Sbjct:    1 MALPSLLPKTAPHLLPFTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAASSAGDSFRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQVVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 209
[Close]
BLAST of Vigst.02G037400.01 vs. ExPASy TrEMBL (2024)
Match: tr|V7AWU9|V7AWU9_PHAVU (Protein DCL OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G065400g PE=4 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 1.870e-132
Identity = 194/211 (91.94%), Postives = 198/211 (93.84%), Query Frame = 0 
Query:    1 MALPSLLPKTAPHLLSLTNPFSSSSSPST--LILPFRFHFFSHLPPLSLLKAASSAGDSLRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 209
            MALPSLLPKTAPHLLSLTNP+SSSSS S   LILPFRFH   HLPPLS LKAASS GDSLRSKPL+S RRGILEEHGS A EEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPE E+KIGCGVDYITIGYHPDFERSRCLFIVRQDGQ+VDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL
Sbjct:    7 MALPSLLPKTAPHLLSLTNPYSSSSSSSPSLLILPFRFHVSPHLPPLSPLKAASSDGDSLRSKPLVSHRRGILEEHGSHASEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPESEKKIGCGVDYITIGYHPDFERSRCLFIVRQDGQVVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 217
[Close]
BLAST of Vigst.02G037400.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SV51|A0AA86SV51_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS25452 PE=4 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.433e-125
Identity = 189/209 (90.43%), Postives = 198/209 (94.74%), Query Frame = 0 
Query:    1 MALPSLLPKTAPHLLSLTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAASSAGDSLRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 209
            MA+PSLLPKTAPHLLSLTNP+SS SSPS  ILPFRFHF  HLPPLS LKAASSAGD+LRSKPL+SQ RGIL+EHGS  FEE+DDDK IDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEK IIEKLLPFHPEFE+KIGCG+DYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYAD+FILRHFRKKSRNL
Sbjct:    7 MAMPSLLPKTAPHLLSLTNPYSSFSSPSISILPFRFHFLPHLPPLSPLKAASSAGDNLRSKPLVSQGRGILQEHGSHTFEEEDDDKSIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKIIIEKLLPFHPEFEKKIGCGIDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADSFILRHFRKKSRNL 215
[Close]
BLAST of Vigst.02G037400.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TDE6|A0A151TDE6_CAJCA (Protein DCL OS=Cajanus cajan OX=3821 GN=KK1_019698 PE=4 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 2.581e-105
Identity = 156/206 (75.73%), Postives = 172/206 (83.50%), Query Frame = 0 
Query:    6 LLPKTAPHLLSLTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAASSAGDSLRSKPLMSQRRGILEEHGSQAFEE--DDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 209
            LLPKTAPHLL   NP+S       LILPFRFH F   PPLS L+A SS  D+LR+KPL+S            AFE+  DDDDKW+DWEDQILEDTVPLVGFVRM+LHSGQYE+GDRLS EHEKTI+EKLLPFHPE ++KIGCGVDYITIGYHPDFERSRCLFIVRQDG++VDFSYWKCIKGLIRKNYPLYAD+FILRHFRKKSRN+
Sbjct:   12 LLPKTAPHLLPFANPYSP------LILPFRFHSFPR-PPLSALRAISSDADNLRAKPLVSH-----------AFEDNNDDDDKWVDWEDQILEDTVPLVGFVRMLLHSGQYENGDRLSPEHEKTILEKLLPFHPESQKKIGCGVDYITIGYHPDFERSRCLFIVRQDGEMVDFSYWKCIKGLIRKNYPLYADSFILRHFRKKSRNM 199
[Close]
BLAST of Vigst.02G037400.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445KVP9|A0A445KVP9_GLYSO (Protein DCL, chloroplastic isoform A OS=Glycine soja OX=3848 GN=D0Y65_008704 PE=4 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.475e-105
Identity = 173/211 (81.99%), Postives = 187/211 (88.63%), Query Frame = 0 
Query:    1 MALPSLLPKTAPHLLSLTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAASSAGDSLRSKPLMSQR--RGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 209
            MAL SLLPKTAPH+LSLTNP  S+S+P   ILPF FH   H P LS LKA+SS GD LR KPL+SQ   +GILEEH   AFE+DDDDKW+DWEDQILEDTVPLVGFVRMILHSGQY++GDRLS EHEKTIIEKLLPFHPEFE+KIG GVDYITIGYHPDFERSRCLFIVR+DG+LVDFSYWKCIKGLIRKNYPLYAD+FILRHFRKKSRNL
Sbjct:    9 MALASLLPKTAPHVLSLTNP--SASTP--FILPFSFHCLPHPPLLSALKASSSGGDDLRGKPLLSQGIGKGILEEH---AFEDDDDDKWVDWEDQILEDTVPLVGFVRMILHSGQYDNGDRLSAEHEKTIIEKLLPFHPEFEKKIGSGVDYITIGYHPDFERSRCLFIVREDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRKKSRNL 212
[Close]
BLAST of Vigst.02G037400.01 vs. ExPASy TrEMBL (2024)
Match: tr|C6T0K2|C6T0K2_SOYBN (Protein DCL, chloroplastic OS=Glycine max OX=3847 GN=100306718 PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.475e-105
Identity = 173/211 (81.99%), Postives = 187/211 (88.63%), Query Frame = 0 
Query:    1 MALPSLLPKTAPHLLSLTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAASSAGDSLRSKPLMSQR--RGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 209
            MAL SLLPKTAPH+LSLTNP  S+S+P   ILPF FH   H P LS LKA+SS GD LR KPL+SQ   +GILEEH   AFE+DDDDKW+DWEDQILEDTVPLVGFVRMILHSGQY++GDRLS EHEKTIIEKLLPFHPEFE+KIG GVDYITIGYHPDFERSRCLFIVR+DG+LVDFSYWKCIKGLIRKNYPLYAD+FILRHFRKKSRNL
Sbjct:    9 MALASLLPKTAPHVLSLTNP--SASTP--FILPFSFHCLPHPPLLSALKASSSGGDDLRGKPLLSQGIGKGILEEH---AFEDDDDDKWVDWEDQILEDTVPLVGFVRMILHSGQYDNGDRLSAEHEKTIIEKLLPFHPEFEKKIGSGVDYITIGYHPDFERSRCLFIVREDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRKKSRNL 212
[Close]
BLAST of Vigst.02G037400.01 vs. ExPASy TrEMBL (2024)
Match: tr|Q00M77|Q00M77_SOYBN (Defective chloroplast and leaves protein OS=Glycine max OX=3847 PE=4 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 8.506e-105
Identity = 173/211 (81.99%), Postives = 187/211 (88.63%), Query Frame = 0 
Query:    1 MALPSLLPKTAPHLLSLTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAASSAGDSLRSKPLMSQR--RGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 209
            MAL SLLPKTAPH+LSLTNP  S+S+P   ILPF FH   H P LS LKA+SS GD LR KPL+SQ   +GILEEH   AFE+DDDDKW+DWEDQILEDTVPLVGFVRMILHSGQY++GDRLS EHEKTIIEKLLPFHPEFE+KIG GVDYITIGYHPDFERSRCLFIVR+DG+LVDFSYWKCIKGLIRKNYPLYAD+FILRHFRKKSRNL
Sbjct:    1 MALASLLPKTAPHVLSLTNP--SASTP--FILPFSFHCLPHPPLLSALKASSSGGDDLRGKPLLSQGIGKGILEEH---AFEDDDDDKWVDWEDQILEDTVPLVGFVRMILHSGQYDNGDRLSAEHEKTIIEKLLPFHPEFEKKIGSGVDYITIGYHPDFERSRCLFIVREDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRKKSRNL 204
[Close]
BLAST of Vigst.02G037400.01 vs. ExPASy TrEMBL (2024)
Match: tr|C6T490|C6T490_SOYBN (Protein DCL, chloroplastic OS=Glycine max OX=3847 GN=100527410 PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.764e-100
Identity = 163/212 (76.89%), Postives = 177/212 (83.49%), Query Frame = 0 
Query:    1 MALPSLLPKTAPHLLSLTNPFSSSSSPSTLILPFRFHFFSH-LP-PLSLLKAA-SSAGDSLRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 209
            MAL SLLPKTAPH LSLTNP  SSS+P  LILPF F    H LP PLS LKA  S  GD+LR KPL+ Q          +  ++DDD+KW+DWED ILEDTVPLVGFVRMILHSGQY++GD+LS EHEKTIIEKLLPFHPEFE+KIG GVDYITIGYHPDFERSRCLFIVRQDG+LVDFSYWKCIKGLIRKNYPLYAD+FILRHFRKKSRNL
Sbjct:    7 MALLSLLPKTAPHALSLTNP--SSSTP--LILPFSFQCLPHPLPSPLSSLKATFSDGGDNLRGKPLVPQ--------AFEEEDDDDDNKWVDWEDLILEDTVPLVGFVRMILHSGQYDNGDKLSPEHEKTIIEKLLPFHPEFEKKIGSGVDYITIGYHPDFERSRCLFIVRQDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRKKSRNL 206
[Close]
BLAST of Vigst.02G037400.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q42463|DCL_SOLLC (Protein DCL, chloroplastic OS=Solanum lycopersicum OX=4081 GN=DCL PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.207e-73
Identity = 99/126 (78.57%), Postives = 116/126 (92.06%), Query Frame = 0 
Query:   83 DDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRN 208
            D + W+DWEDQILEDTVPLVGFVRMILHSG+Y  GDRLS +H++TI+++LLP+HPE ++KIG GVDYIT+GYHPDFE SRCLFIVR+DG+ VDFSYWKCIKGLIRKNYPLYAD+FILRHFRK+ RN
Sbjct:   98 DGEGWVDWEDQILEDTVPLVGFVRMILHSGKYAIGDRLSPDHQRTILQRLLPYHPECDKKIGPGVDYITVGYHPDFENSRCLFIVRKDGETVDFSYWKCIKGLIRKNYPLYADSFILRHFRKRRRN 223
[Close]
BLAST of Vigst.02G037400.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9C642|DCL_ARATH (Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DCL PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.077e-72
Identity = 118/216 (54.63%), Postives = 149/216 (68.98%), Query Frame = 0 
Query:    2 ALPSLLPKTAPHLLSLTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAAS---------SAGDSLRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRN 208
            ++PS  P  +P+    T  FS SSSP  L  P R    S  P +  L+  S         S G  L  +P ++      EE   +    + D+ ++DWED+ILE TVPLVGFVRMILHSG+Y + DRLS EHE+TIIE LLP+HPE E+KIGCG+DYI +G+HPDFE SRC+FIVR+DG++VDFSYWKCIKGLI+K YPLYAD+FILRHFRK+ +N
Sbjct:    5 SIPSSSPVASPYFRCRTYIFSFSSSPLCLYFP-RGDSTSLRPRVRALRTESDGAKIGNSESYGSELLRRPRIASEESSEEEEEEEEENSEGDE-FVDWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVGHHPDFESSRCMFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRKRRQN 218
[Close]
BLAST of Vigst.02G037400.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5D869|NRPE1_ARATH (DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPE1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.553e-23
Identity = 48/120 (40.00%), Postives = 72/120 (60.00%), Query Frame = 0 
Query:   85 DKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRK 204
            D +   E ++L D  P++  +R I+H   Y  GD +S++ +  ++EK+L FHP+ E K+G GVD+IT+  H  F  SRC F+V  DG   DFSY K +   + K YP  A+ FI ++F K
Sbjct: 1730 DSFTSEEQELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFTK 1849
[Close]
BLAST of Vigst.02G037400.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|P85936|DCL_PSEMZ (Protein DCL, chloroplastic (Fragment) OS=Pseudotsuga menziesii OX=3357 PE=1 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 9.231e-8
Identity = 19/22 (86.36%), Postives = 21/22 (95.45%), Query Frame = 0 
Query:   87 WIDWEDQILEDTVPLVGFVRMI 108
            W+DWEDQIL+DTVPLV FVRMI
Sbjct:    2 WVDWEDQILQDTVPLVNFVRMI 23
[Close]
BLAST of Vigst.02G037400.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:17169874-17171381 REVERSE LENGTH=219)

HSP 1 Score: 222.631 bits (566), Expect = 1.124e-73
Identity = 118/216 (54.63%), Postives = 149/216 (68.98%), Query Frame = 0 
Query:    2 ALPSLLPKTAPHLLSLTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAAS---------SAGDSLRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRN 208
            ++PS  P  +P+    T  FS SSSP  L  P R    S  P +  L+  S         S G  L  +P ++      EE   +    + D+ ++DWED+ILE TVPLVGFVRMILHSG+Y + DRLS EHE+TIIE LLP+HPE E+KIGCG+DYI +G+HPDFE SRC+FIVR+DG++VDFSYWKCIKGLI+K YPLYAD+FILRHFRK+ +N
Sbjct:    5 SIPSSSPVASPYFRCRTYIFSFSSSPLCLYFP-RGDSTSLRPRVRALRTESDGAKIGNSESYGSELLRRPRIASEESSEEEEEEEEENSEGDE-FVDWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVGHHPDFESSRCMFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRKRRQN 218
[Close]
BLAST of Vigst.02G037400.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:17169874-17171381 REVERSE LENGTH=219)

HSP 1 Score: 218.779 bits (556), Expect = 3.656e-72
Identity = 117/216 (54.17%), Postives = 148/216 (68.52%), Query Frame = 0 
Query:    2 ALPSLLPKTAPHLLSLTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAAS---------SAGDSLRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRN 208
            ++PS  P  +P+    T  FS SSSP  L  P R    S  P +  L+  S         S G  L  +P ++      EE   +    + D+ ++DWED+ILE TVPLVGFVRMILHSG+Y + DRLS EHE+TIIE LLP+HPE E+KIGCG+DYI + +HPDFE SRC+FIVR+DG++VDFSYWKCIKGLI+K YPLYAD+FILRHFRK+ +N
Sbjct:    5 SIPSSSPVASPYFRCRTYIFSFSSSPLCLYFP-RGDSTSLRPRVRALRTESDGAKIGNSESYGSELLRRPRIASEESSEEEEEEEEENSEGDE-FVDWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVWHHPDFESSRCMFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRKRRQN 218
[Close]
BLAST of Vigst.02G037400.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:17181138-17182346 REVERSE LENGTH=207)

HSP 1 Score: 134.806 bits (338), Expect = 2.142e-39
Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = 0 
Query:   75 GSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKS 206
             S  +E+ D  KW + E +IL D  P+    + ILHS +Y  G+RL  E EK ++EKLLP+HP  + KIGCG+D+I +  HP F  SRCLF+VR DG  +DFSY KC++  +R  YP +A+ FI  HF++ S
Sbjct:   75 NSWRYEDPDYRKWKNLEAEILRDIEPISLLAKEILHSDRYLDGERLDFEDEKIVMEKLLPYHPYSKDKIGCGLDFIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYVRDKYPSHAERFIREHFKRAS 206
[Close]
BLAST of Vigst.02G037400.01 vs. Araport11
Match: | (Symbols: DMS5, NRPD1B, NRPE1, DRD3, ATNRPD1B | DEFECTIVE IN MERISTEM SILENCING 5, nuclear RNA polymerase D1B | chr2:16715089-16723406 FORWARD LENGTH=1976)

HSP 1 Score: 101.293 bits (251), Expect = 1.570e-24
Identity = 48/120 (40.00%), Postives = 72/120 (60.00%), Query Frame = 0 
Query:   85 DKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILRHFRK 204
            D +   E ++L D  P++  +R I+H   Y  GD +S++ +  ++EK+L FHP+ E K+G GVD+IT+  H  F  SRC F+V  DG   DFSY K +   + K YP  A+ FI ++F K
Sbjct: 1730 DSFTSEEQELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFTK 1849
[Close]
BLAST of Vigst.02G037400.01 vs. Araport11
Match: | (Symbols: NRPD1, NRPD1A, POL IVA, SMD2, SDE4 | SILENCING MOVEMENT DEFICIENT 2, NUCLEAR RNA POLYMERASE D 1A, nuclear RNA polymerase D1A | chr1:23355329-23359611 REVERSE LENGTH=1145)

HSP 1 Score: 49.6766 bits (117), Expect = 6.062e-7
Identity = 33/85 (38.82%), Postives = 46/85 (54.12%), Query Frame = 0 
Query:  105 VRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGY--HPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIR 187
            ++ ILHS  YE  + L+E  E  +++ +L  HP   +KIG GV  I +    H D   S C  +VR DG   DFSY KC+ G  +
Sbjct: 1038 LKRILHS--YEINELLNERDEG-LVKMVLQLHPNSVEKIGPGVKGIRVAKSKHGD---SCCFEVVRIDGTFEDFSYHKCVLGATK 1116
[Close]
BLAST of Vigst.02G037400.01 vs. Araport11
Match: | (Symbols: NRPD1, NRPD1A, POL IVA, SMD2, SDE4 | SILENCING MOVEMENT DEFICIENT 2, NUCLEAR RNA POLYMERASE D 1A, nuclear RNA polymerase D1A | chr1:23355329-23361126 REVERSE LENGTH=1439)

HSP 1 Score: 49.6766 bits (117), Expect = 7.476e-7
Identity = 33/85 (38.82%), Postives = 46/85 (54.12%), Query Frame = 0 
Query:  105 VRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGY--HPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIR 187
            ++ ILHS  YE  + L+E  E  +++ +L  HP   +KIG GV  I +    H D   S C  +VR DG   DFSY KC+ G  +
Sbjct: 1332 LKRILHS--YEINELLNERDEG-LVKMVLQLHPNSVEKIGPGVKGIRVAKSKHGD---SCCFEVVRIDGTFEDFSYHKCVLGATK 1410
[Close]
BLAST of Vigst.02G037400.01 vs. Araport11
Match: | (Symbols: NRPD1, NRPD1A, POL IVA, SMD2, SDE4 | SILENCING MOVEMENT DEFICIENT 2, NUCLEAR RNA POLYMERASE D 1A, nuclear RNA polymerase D1A | chr1:23355329-23361126 REVERSE LENGTH=1453)

HSP 1 Score: 49.6766 bits (117), Expect = 7.694e-7
Identity = 33/85 (38.82%), Postives = 46/85 (54.12%), Query Frame = 0 
Query:  105 VRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGY--HPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIR 187
            ++ ILHS  YE  + L+E  E  +++ +L  HP   +KIG GV  I +    H D   S C  +VR DG   DFSY KC+ G  +
Sbjct: 1346 LKRILHS--YEINELLNERDEG-LVKMVLQLHPNSVEKIGPGVKGIRVAKSKHGD---SCCFEVVRIDGTFEDFSYHKCVLGATK 1424
[Close]
BLAST of Vigst.02G037400.01 vs. Araport11
Match: | (Symbols: NRPD1, NRPD1A, POL IVA, SMD2, SDE4 | SILENCING MOVEMENT DEFICIENT 2, NUCLEAR RNA POLYMERASE D 1A, nuclear RNA polymerase D1A | chr1:23355329-23361126 REVERSE LENGTH=1453)

HSP 1 Score: 49.6766 bits (117), Expect = 7.694e-7
Identity = 33/85 (38.82%), Postives = 46/85 (54.12%), Query Frame = 0 
Query:  105 VRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGY--HPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIR 187
            ++ ILHS  YE  + L+E  E  +++ +L  HP   +KIG GV  I +    H D   S C  +VR DG   DFSY KC+ G  +
Sbjct: 1346 LKRILHS--YEINELLNERDEG-LVKMVLQLHPNSVEKIGPGVKGIRVAKSKHGD---SCCFEVVRIDGTFEDFSYHKCVLGATK 1424
The following BLAST results are available for this feature:
BLAST of Vigst.02G037400.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3RAS0|A0A0S3RAS0_PHAAN2.406e-15099.04Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A8T0KMZ2|A0A8T0KMZ2_PHAAN2.406e-15099.04Protein DCL-like protein OS=Phaseolus angularis OX... [more]
tr|A0A1S3U8Z7|A0A1S3U8Z7_VIGRR3.171e-14998.09Protein DCL homolog, chloroplastic OS=Vigna radiat... [more]
tr|V7AWU9|V7AWU9_PHAVU1.870e-13291.94Protein DCL OS=Phaseolus vulgaris OX=3885 GN=PHAVU... [more]
tr|A0AA86SV51|A0AA86SV51_9FABA1.433e-12590.43Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A151TDE6|A0A151TDE6_CAJCA2.581e-10575.73Protein DCL OS=Cajanus cajan OX=3821 GN=KK1_019698... [more]
tr|A0A445KVP9|A0A445KVP9_GLYSO3.475e-10581.99Protein DCL, chloroplastic isoform A OS=Glycine so... [more]
tr|C6T0K2|C6T0K2_SOYBN3.475e-10581.99Protein DCL, chloroplastic OS=Glycine max OX=3847 ... [more]
tr|Q00M77|Q00M77_SOYBN8.506e-10581.99Defective chloroplast and leaves protein OS=Glycin... [more]
tr|C6T490|C6T490_SOYBN1.764e-10076.89Protein DCL, chloroplastic OS=Glycine max OX=3847 ... [more]
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BLAST of Vigst.02G037400.01 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
sp|Q42463|DCL_SOLLC2.207e-7378.57Protein DCL, chloroplastic OS=Solanum lycopersicum... [more]
sp|Q9C642|DCL_ARATH1.077e-7254.63Protein DCL homolog, chloroplastic OS=Arabidopsis ... [more]
sp|Q5D869|NRPE1_ARATH1.553e-2340.00DNA-directed RNA polymerase V subunit 1 OS=Arabido... [more]
sp|P85936|DCL_PSEMZ9.231e-886.36Protein DCL, chloroplastic (Fragment) OS=Pseudotsu... [more]
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BLAST of Vigst.02G037400.01 vs. Araport11
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs arabidopsis Araport11)
Total hits: 8
Match NameE-valueIdentityDescription
|1.124e-7354.63Symbols: no symbol available | no full name availa... [more]
|3.656e-7254.17Symbols: no symbol available | no full name availa... [more]
|2.142e-3946.97Symbols: no symbol available | no full name availa... [more]
|1.570e-2440.00Symbols: DMS5, NRPD1B, NRPE1, DRD3, ATNRPD1B | DEF... [more]
|6.062e-738.82Symbols: NRPD1, NRPD1A, POL IVA, SMD2, SDE4 | SILE... [more]
|7.476e-738.82Symbols: NRPD1, NRPD1A, POL IVA, SMD2, SDE4 | SILE... [more]
|7.694e-738.82Symbols: NRPD1, NRPD1A, POL IVA, SMD2, SDE4 | SILE... [more]
|7.694e-738.82Symbols: NRPD1, NRPD1A, POL IVA, SMD2, SDE4 | SILE... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna stipulacea acc. JP252948 genome v1.0
Date Performed: 2024-08-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.10.450.40:FF:000008coord: 96..188
e-value: 4.1E-46
score: 157.0
NoneNo IPR availableGENE3D3.10.450.40coord: 95..185
e-value: 8.1E-25
score: 89.2
NoneNo IPR availablePFAMPF11523DUF3223coord: 106..182
e-value: 9.2E-28
score: 107.9
IPR044673Protein DCL-likePANTHERPTHR33415PROTEIN EMBRYO DEFECTIVE 514coord: 74..205

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigStip.JP252948.2.0.Vigst.02G037400.01 ID=drVigStip.JP252948.2.0.Vigst.02G037400.01; Name=Vigst.02G037400.01; organism=Vigna stipulacea; type=mRNA; length=630bp
ATGGCTTTGCCTTCTTTACTACCCAAAACGGCACCGCATCTTCTTTCCCT
CACAAACCCCTTCTCTTCCTCTTCCTCTCCCTCTACTCTCATCTTACCTT
TCCGCTTCCACTTTTTCTCTCATCTTCCTCCTCTCTCTCTTCTCAAAGCC
GCTTCCTCCGCCGGCGATAGTCTGCGCAGCAAGCCCCTCATGTCCCAAAG
AAGGGGGATTTTGGAGGAACACGGCAGCCAAGCCTTTGAGGAAGACGACG
ACGACAAATGGATTGACTGGGAGGACCAGATTTTGGAGGACACAGTTCCT
CTCGTTGGTTTCGTCAGGATGATTCTCCATTCTGGACAATATGAAAGTGG
AGATAGACTAAGTGAAGAGCATGAGAAAACCATTATTGAGAAGCTGCTTC
CCTTTCATCCAGAATTTGAGCAGAAGATCGGATGTGGAGTTGATTATATC
ACGATTGGATATCATCCTGATTTTGAACGCTCAAGGTGTTTGTTCATTGT
TCGACAAGATGGTCAACTGGTTGATTTTTCATATTGGAAATGTATAAAGG
GCTTGATCAGAAAGAACTATCCATTATATGCAGACACTTTCATTCTCAGA
CATTTCAGGAAGAAAAGTCGTAATTTGTGA
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protein sequence of drVigStip.JP252948.2.0.Vigst.02G037400.01

>drVigStip.JP252948.2.0.Vigst.02G037400.01 ID=drVigStip.JP252948.2.0.Vigst.02G037400.01; Name=drVigStip.JP252948.2.0.Vigst.02G037400.01; organism=Vigna stipulacea; type=polypeptide; length=210bp
MALPSLLPKTAPHLLSLTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKA
ASSAGDSLRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVP
LVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYI
TIGYHPDFERSRCLFIVRQDGQLVDFSYWKCIKGLIRKNYPLYADTFILR
HFRKKSRNL*
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mRNA from alignment at Chr02:2877864..2882380+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigStip.JP252948.2.0.Vigst.02G037400.01 ID=drVigStip.JP252948.2.0.Vigst.02G037400.01; Name=Vigst.02G037400.01; organism=Vigna stipulacea; type=mRNA; length=4517bp; location=Sequence derived from: Chr02:2877864..2882380+ (Vigna stipulacea
TGATAACCCGGTGGGGGAAGAAAATGGGTAGAGGAGAGGGAGCTGAAGCT
GCTTCTTTATCCTAAACTTGAGTTTCCCGCAGAGCTGAGAGAGTGAGTGA
TGAATAATAGAATACGATGTTAGTTGGATAATTGGGTGAGCTGAGTGATA
AATTCGACTTCAACCATGGCTTTGCCTTCTTTACTACCCAAAACGGCACC
GCATCTTCTTTCCCTCACAAACCCCTTCTCTTCCTCTTCCTCTCCCTCTA
CTCTCATCTTACCTTTCCGCTTCCACTTTTTCTCTCATCTTCCTCCTCTC
TCTCTTCTCAAAGCCGCTTCCTCCGCCGGCGATAGTCTGCGCAGCAAGCC
CCTCATGTCCCAAAGAAGGGGGATTTTGGAGGAACACGGCAGCCAAGCCT
TTGAGGAAGACGACGACGACAAATGGATTGACTGGGAGGACCAGATTTTG
GAGGACACAGTTCCTCTCGTTGGTTTCGTCAGGATGATTCTCCATTCTGG
ACAGTATGTTTCTCTCATCAAACCATTTTCCTCGCTTTACTTTACTTTAT
GCCCATATATGCATACTGTGACCGTATTATGCAATTGCAGTTGAAACTAC
TAATATACCTGTTAGTCTAACTCGAATCCAATGCAGATCACATACTAACA
GTCTAAGTCTTACTCTACCGTTTGAGTGTTTTAACCTCTCCACATCACAA
TAAACAGTCCAATCATCAGCGAGTACGCTCAAGACCTGCTCTGAAGTTTC
GTATTGATTCCTGCTATACGATTTCAGAACTATGTCTTGAGAAAGAGCTG
CAAAAATGCGTAAACAAGACATAGGCGGATTTGTTTAAGCAAATTTGGAG
ATTCATGTATCACGGGAGTCTTCAATTTCGTTCTCCGTCTTAATTCCTTG
TCACCTCTTATGTTTAAATCTGGGTGTTTTGAATAGCTACTATTGCGGTG
CTATTGCTTTGTGAGTTTCCCTGGATTGACAATTGTTCTCCGTCTTCCAT
TGTGGCTGCTATGAGTGTCATGGTTGTAGCATGCATCCTCTTGTTATCTC
ACTTTAGAATCCAAATGTAAGTCTAAGTCTCACTTTTGATAAAAATGAGA
AAGTAAAACATAATACAAGGATCAAGACTTATAAACCCAATGTTTTAAGG
TTTTGAATTGAGTAGTGTCCGCCCTCCTGGACTTTTGTTTCATTGGTGAT
TGGTGCTGTGTCTCTCCAATAAACCCTATACAATCTGTGGCCTATTGAAA
TTTTTTGAGTTCATATTTTTCCAATTTTTATCCATTTTATATTTATTTGC
CTACAGCTTAAATTGTGATGTATATATAATTGATATATATAGTATATTTA
ACCTATTGTGCGAATTTTTCACTATTTGCTCACAATGGTATCCACCACTG
GATATAACAGTTTATTGACTTTCCACCGTTTTCTGCTATCCACAACTGAT
GATACTGGGTGTTTGAACTGATGAATCCCAACACTGCATGCCTCTAGGGT
TATGTCCATAACAATATAACTGGAAACAAGAAAAACAAGGAGTGAGTAAT
TTTATACGGGTGCAGTAAATGCCTTCTTTGTTGGTAACTGACACCGTCTT
GTGTGTCAGAGCAAAATATTGAGATTGATTTTTAAGTGCTCTGACATTTT
AAATAATGTCTGGGTTTCAAACACAGAACCTTGGCTATATGAAAAGGGCC
AGGGAAGTGGGAATCTTTTTTACCCAAAGTTCCAAACCACTTTTGGGCTT
TCAATTTCCAGAAATGAAATCCATAACTGCAATAGCATTGAAATTGATAA
AGACGATTTGGATATAGAAGATCATGATTAATGAAACCTATCTAGGAAAC
TTGTATTTGACATTTTGTTGGTATTTACTTGTATGTTTAGACACCTATGG
CTTTTAATTGTTTTTTATGAATGTATGAGTTTTGAGCAATTTCTATCATT
TTTTATAATTTACGTATATACTATATAACAATTTTCAGAGTTGTGCTTAT
CCCTCTATAGAGTTTCTGGGGTCAGTTGCTATGCGCTGCTATTTGGGATT
TAAAACACTGATGGATCTGCATACATGTTTTGTTTTCATTTATCTTGGAA
ATTCTGATGATAGCTTGTTACAAATTCTTGCCTCAGATATACATCTCTTG
GTCTCATTTCTCTTGGAATTCTGATAATACCTTGTTGCAAATTCTTGTCA
TAGATATGAAAGTGGAGATAGACTAAGTGAAGAGCATGAGAAAACCATTA
TTGAGAAGCTGCTTCCCTTTCATCCAGAATTTGAGCAGAAGATCGGATGT
GGAGTTGATTATATCACGGTATCTCTCTATCACACACTTTTCTCCTTCTT
ACTCAATTCGCGCACACACACACAATATATGCACTAATTTTGTTTACAAA
AGGCCTTCCAATATTACTTTTTTTTTTTTTTTCAGTTGGGTCCAATAATG
ATGAATTTTATAGTTTTAGCAGTCTCTTAGATTAGATAAATGGCCGTGAC
ATCAGGTGTTCGTCCATTAAAATATTTAATATGGCTCTGGTTTATGGTGG
GTGATGGAAAGCCAGCTTAACTGTGGTTGTTGATGTGAGACAGTGGGGTG
CTTTCATTGCATTTGCAGCCTCCATCACCTTCATTGTGTTGGATGTGAGA
CAGTGTGGTTAGTCCTGTCCTATGTCGTCTAGTAATGCAGCCTAAGTAGC
GATTATAAGTTTTGGATAATTTACAACTTATTAGGTGGATTTGGAATTGA
GTTTGGTCCTGAGCTCAAATTCCAATAGTGGGGACTGACTAATAACAGGA
TCTGTCTCTGACGAAATGCAGGGTGCAATAGTGCAAATTGGTTTATTGCT
GGGGAAAATGAAGTAATTGGCTTTTGTTAATCATTAATGATCCACTCTAA
ATTTCACTCGGCAAAATGGTCCCATGCAATTAAAGAACTCCATCCTTAAT
ATTGTTAATAACTGAACTTAAGTATCTCTTCTGTCTCCCAGGCTCTGCTA
CAGATAAGTTTTTTCAGGATTTTCATACTGAATTTGTATTGATTTTTCCA
GTAGGCCAGTAAATTCAGTGCTCCAAATTCGTCTGCTTTTCTCCATCTTT
GTCTCATTCCATGGTAGTTATGAATTCACATGATACATATACTTAGAAAT
GTTTAGCCCGGTAAAAGCCTTTTGCCGCTAGCCATGTGATGTGTGTAAAA
ACAGTCCATTATGCTGAAATAAACCTGAATTTTAACCACATTTTAAAAAA
ATCCAAATAATGGAAGTAGGGTTTTAAACCAAGATTTCTACTTTTTAGTA
GATAATTCAGTTAACTGGTTTTAAAAATTTGATTTTGACTTACAGTTGGC
TTTTAAAACTGGTTGTGACTAGTGGTCCTAGACAAGTTTTAAAACTAATT
TTGGTTAAAAACGTAATTGGGATCAAAACCAGTTAAAAATTAGTTTAAAA
CTGGTTCGACCAAAACCAAACCAGTTTTAAAATCCGATTCTTATAATTCG
TTGGATTTGAACTGGTTTTACATTATATAAAGCCCTCCCGGCTAGCCAAA
TATCTTTGACCTTGGTGTTACCATCAATCACGTGTATAATAATTTTATTC
CTGTCTTAGCTGTTGAAAAGTATGTAAAGGAAAGGATTCCATTTGTCCCT
TGCTTGGCTACTGGTGCATAGTGCATTGACTGGCTTATCCTCTCTAACTG
TCTGCCATCACTTTCCGACATTAGCTTTTGAAAAAAACTCATAAAAATCA
ATAAAATATGTATTTAATGCCTTCATTGTCTCCCGAATTGAATTACATCC
AATCTGTTTTTTTTTTTTGGGTTAACTAATTACACGTGGTTTGCGATTTT
TACATGTTGCTGAAAGTTTTCTGTTCGCTTTAAAATTGACAGATTGGATA
TCATCCTGATTTTGAACGCTCAAGGTGTTTGTTCATTGTTCGACAAGATG
GTCAACTGGTTGATTTTTCATATTGGAAATGTATAAAGGGCTTGATCAGA
AAGAACTATCCATTATATGCAGACACTTTCATTCTCAGACATTTCAGGAA
GAAAAGTCGTAATTTGTGAAGTTAAAACTGTATTATGCTGGTTGGACCAT
TTTATATTAGCGTTTGCTTCTTTTTTTATTTTTTATCATTTAGTGTTTTC
TTATTGGTAGCATGGTATTTTAAAGGTCAGAGAAAAATGGTGCACAATTT
TTTTGGAGTTCTGAAGAGTGTTTGATATTTATGGACTCACTACAAATAAT
TGCCACTCAATGCCGGAATTTGTTCCCATTTTATTGACAATATTCGTAGT
GATATAGAATTATGGAAATGTAGATGATGTAGATGATAATGTACCTTTCA
GTGCATATATTTTCAATTTGTAGAATTGAAGTTCATTTTATACCGTTTTA
CACCCCCTGTTTGCTTAGAGTGAAATAAGGAAGAAATAATTGGAGATGAT
GTAAAACCTTCTATTGTTTGTTTAGAAGTGAAATTAGGAATGAAATCTCC
GTGTGCTTGGACGAGAG
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Coding sequence (CDS) from alignment at Chr02:2877864..2882380+

>drVigStip.JP252948.2.0.Vigst.02G037400.01 ID=drVigStip.JP252948.2.0.Vigst.02G037400.01; Name=Vigst.02G037400.01; organism=Vigna stipulacea; type=CDS; length=630bp; location=Sequence derived from: Chr02:2877864..2882380+ (Vigna stipulacea
ATGGCTTTGCCTTCTTTACTACCCAAAACGGCACCGCATCTTCTTTCCCT
CACAAACCCCTTCTCTTCCTCTTCCTCTCCCTCTACTCTCATCTTACCTT
TCCGCTTCCACTTTTTCTCTCATCTTCCTCCTCTCTCTCTTCTCAAAGCC
GCTTCCTCCGCCGGCGATAGTCTGCGCAGCAAGCCCCTCATGTCCCAAAG
AAGGGGGATTTTGGAGGAACACGGCAGCCAAGCCTTTGAGGAAGACGACG
ACGACAAATGGATTGACTGGGAGGACCAGATTTTGGAGGACACAGTTCCT
CTCGTTGGTTTCGTCAGGATGATTCTCCATTCTGGACAATATGAAAGTGG
AGATAGACTAAGTGAAGAGCATGAGAAAACCATTATTGAGAAGCTGCTTC
CCTTTCATCCAGAATTTGAGCAGAAGATCGGATGTGGAGTTGATTATATC
ACGATTGGATATCATCCTGATTTTGAACGCTCAAGGTGTTTGTTCATTGT
TCGACAAGATGGTCAACTGGTTGATTTTTCATATTGGAAATGTATAAAGG
GCTTGATCAGAAAGAACTATCCATTATATGCAGACACTTTCATTCTCAGA
CATTTCAGGAAGAAAAGTCGTAATTTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR044673DCL-like