Vigst.02G052000.01
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vigst.02G052000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RBE7|A0A0S3RBE7_PHAAN (Transmembrane protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G065600 PE=4 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.398e-69 Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0 Query: 1 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRKAECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLLLLILNLKSSL 111 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRK ECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLLLLILNLKSSL Sbjct: 1 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRKTECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLLLLILNLKSSL 111
BLAST of Vigst.02G052000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UGV0|A0A0L9UGV0_PHAAN (Transmembrane protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0097470 PE=4 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.398e-69 Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0 Query: 1 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRKAECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLLLLILNLKSSL 111 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRK ECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLLLLILNLKSSL Sbjct: 1 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRKTECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLLLLILNLKSSL 111
BLAST of Vigst.02G052000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3U499|A0A1S3U499_VIGRR (Uncharacterized protein LOC106761777 OS=Vigna radiata var. radiata OX=3916 GN=LOC106761777 PE=4 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 4.626e-69 Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0 Query: 1 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRKAECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLLLLILNLKSSL 111 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRK ECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLL LILNLKSSL Sbjct: 1 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRKTECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLLFLILNLKSSL 111
BLAST of Vigst.02G052000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6NUI6|A0A4D6NUI6_VIGUN (Transmembrane protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g3368 PE=4 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 2.775e-67 Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 0 Query: 1 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRKAECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLLLLILNLKSSL 111 MEVGG RRGSRFSSYERLAAIGLVLLAVASPLYIDRKAECELEEEDQPIN DAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILA+LSLLLLILNLKSSL Sbjct: 1 MEVGGCRRGSRFSSYERLAAIGLVLLAVASPLYIDRKAECELEEEDQPINVDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILALLSLLLLILNLKSSL 111
BLAST of Vigst.02G052000.01 vs. ExPASy TrEMBL (2024)
Match: tr|V7AU76|V7AU76_PHAVU (Transmembrane protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G082200g PE=4 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 8.983e-54 Identity = 101/111 (90.99%), Postives = 106/111 (95.50%), Query Frame = 0 Query: 1 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRKAECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLLLLILNLKSSL 111 ME+GG RRGSRFSSYERLAAIGLVLLAVASPLYIDRKAECELE+EDQP+N DAFLPFLLL+LIFGI SAFLDRTLA FDRYWIYRVIGSSGGILAIL+LLLLILNLKSSL Sbjct: 1 MEIGGCRRGSRFSSYERLAAIGLVLLAVASPLYIDRKAECELEDEDQPLNVDAFLPFLLLVLIFGIVSSAFLDRTLAGFDRYWIYRVIGSSGGILAILTLLLLILNLKSSL 111
BLAST of Vigst.02G052000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86VMD4|A0AA86VMD4_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS25646 PE=4 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 4.659e-52 Identity = 96/111 (86.49%), Postives = 104/111 (93.69%), Query Frame = 0 Query: 1 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRKAECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLLLLILNLKSSL 111 MEVGG RRGS+FSSYERLAAIGLVLLAVASP+YIDRKAECELE+E+QPIN + FLPFLL+LLI IALSAFLDRTLA FDRYWIYRVIGSSGGILAIL+LL +ILNLKSSL Sbjct: 1 MEVGGCRRGSKFSSYERLAAIGLVLLAVASPIYIDRKAECELEDEEQPINGEVFLPFLLILLISCIALSAFLDRTLAGFDRYWIYRVIGSSGGILAILTLLFVILNLKSSL 111
BLAST of Vigst.02G052000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445K570|A0A445K570_GLYSO (Transmembrane protein OS=Glycine soja OX=3848 GN=D0Y65_013831 PE=4 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.940e-47 Identity = 87/111 (78.38%), Postives = 95/111 (85.59%), Query Frame = 0 Query: 1 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRKAECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLLLLILNLKSSL 111 ME G RRGSRFSSYERLAAIGL +LAVASPLYIDRKAECELE+E+QPIN D LPFLL LL GIALSA +DR+ A FDRYWI+RVIGSSGGILAIL++L LIL KSSL Sbjct: 1 MEFRGCRRGSRFSSYERLAAIGLAILAVASPLYIDRKAECELEDEEQPINVDVLLPFLLFLLTLGIALSASMDRSFAGFDRYWIHRVIGSSGGILAILTVLFLILKFKSSL 111
BLAST of Vigst.02G052000.01 vs. ExPASy TrEMBL (2024)
Match: tr|I1K8G5|I1K8G5_SOYBN (Transmembrane protein OS=Glycine max OX=3847 GN=102659395 PE=4 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 1.940e-47 Identity = 87/111 (78.38%), Postives = 95/111 (85.59%), Query Frame = 0 Query: 1 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRKAECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLLLLILNLKSSL 111 ME G RRGSRFSSYERLAAIGL +LAVASPLYIDRKAECELE+E+QPIN D LPFLL LL GIALSA +DR+ A FDRYWI+RVIGSSGGILAIL++L LIL KSSL Sbjct: 1 MEFRGCRRGSRFSSYERLAAIGLAILAVASPLYIDRKAECELEDEEQPINVDVLLPFLLFLLTLGIALSASMDRSFAGFDRYWIHRVIGSSGGILAILTVLFLILKFKSSL 111
BLAST of Vigst.02G052000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151RST2|A0A151RST2_CAJCA (Transmembrane protein OS=Cajanus cajan OX=3821 GN=KK1_032838 PE=4 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.178e-46 Identity = 88/111 (79.28%), Postives = 98/111 (88.29%), Query Frame = 0 Query: 1 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRKAECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLLLLILNLKSSL 111 MEVGG RR SRFSSYERLAAIGL++LAVASPLYIDRKAECELE+E+QPI D +LPFLL LLIF IA+SAFLD++ A FDRYWI+RVIGSS GILAIL+LL LIL KSSL Sbjct: 1 MEVGGCRRRSRFSSYERLAAIGLLILAVASPLYIDRKAECELEDEEQPIIVDLWLPFLLFLLIFSIAMSAFLDKSFAGFDRYWIHRVIGSSAGILAILTLLFLILKFKSSL 111
BLAST of Vigst.02G052000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2RFV2|A0A0B2RFV2_GLYSO (Transmembrane protein OS=Glycine soja OX=3848 GN=glysoja_035263 PE=4 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 6.511e-44 Identity = 85/111 (76.58%), Postives = 93/111 (83.78%), Query Frame = 0 Query: 1 MEVGGWRRGSRFSSYERLAAIGLVLLAVASPLYIDRKAECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGGILAILSLLLLILNLKSSL 111 ME G RRGSRFSSYERLAAI +LAVASPLYIDRKAECELE+E+QPIN D LPFLL LL GIALSA +DR+ A FDRYWI+RVIGSSGGILAIL++L LIL KSSL Sbjct: 1 MEFRGCRRGSRFSSYERLAAI---VLAVASPLYIDRKAECELEDEEQPINVDVLLPFLLFLLTLGIALSASMDRSFAGFDRYWIHRVIGSSGGILAILTVLFLILKFKSSL 108
BLAST of Vigst.02G052000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:7240789-7241127 FORWARD LENGTH=112) HSP 1 Score: 45.8246 bits (107), Expect = 3.398e-7 Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 0 Query: 11 RFSSYERLAAIGLVLLAVASPLYIDRKAECELEEEDQPINFDAFLPFLLLLLIFGIALSAFLDRTLAAFDRYWIYRVIGSSGG 93 RF++ +L AI L +LAV SPLYIDR +E +LEEE++ +F LLLLLI IALS + D +L FD YWI+R+ GS GG Sbjct: 12 RFTTSRKLLAISLSVLAVLSPLYIDRLSEEDLEEEEELFSFMFSFSLLLLLLILAIALSLYSDPSLTRFDPYWIHRLCGSFGG 94 The following BLAST results are available for this feature:
BLAST of Vigst.02G052000.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vigst.02G052000.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vigst.02G052000.01 vs. Araport11
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs arabidopsis Araport11) Total hits: 1
InterPro
Analysis Name: InterProScan Analysis for Vigna stipulacea acc. JP252948 genome v1.0
Date Performed: 2024-08-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >drVigStip.JP252948.2.0.Vigst.02G052000.01 ID=drVigStip.JP252948.2.0.Vigst.02G052000.01; Name=Vigst.02G052000.01; organism=Vigna stipulacea; type=mRNA; length=336bpback to top protein sequence of drVigStip.JP252948.2.0.Vigst.02G052000.01 >drVigStip.JP252948.2.0.Vigst.02G052000.01 ID=drVigStip.JP252948.2.0.Vigst.02G052000.01; Name=drVigStip.JP252948.2.0.Vigst.02G052000.01; organism=Vigna stipulacea; type=polypeptide; length=112bpback to top mRNA from alignment at Chr02:4156083..4156706- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drVigStip.JP252948.2.0.Vigst.02G052000.01 ID=drVigStip.JP252948.2.0.Vigst.02G052000.01; Name=Vigst.02G052000.01; organism=Vigna stipulacea; type=mRNA; length=624bp; location=Sequence derived from: Chr02:4156083..4156706- (Vigna stipulaceaback to top Coding sequence (CDS) from alignment at Chr02:4156083..4156706- >drVigStip.JP252948.2.0.Vigst.02G052000.01 ID=drVigStip.JP252948.2.0.Vigst.02G052000.01; Name=Vigst.02G052000.01; organism=Vigna stipulacea; type=CDS; length=336bp; location=Sequence derived from: Chr02:4156083..4156706- (Vigna stipulaceaback to top |