Vigst.03G093300.01

Transcript Overview
NameVigst.03G093300.01
Unique NamedrVigStip.JP252948.2.0.Vigst.03G093300.01
TypemRNA
OrganismVigna stipulacea ()
Sequence length309
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr03chromosomeChr03:11262078..11262763 -Vigna stipulacea acc. JP252948 genome v2.a1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vstvvaR384Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvvaR420Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvvaR425Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstL0165Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0441Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0692Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvstL514Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvstL652Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvstL1324Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carvstL158Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvstL158Pisum sativum Cameor genome v1aPisum sativum
psvstL163Pisum sativum Cameor genome v1aPisum sativum
psvstL490Pisum sativum Cameor genome v1aPisum sativum
carvstL459Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pvvstL770Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvstL909Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vfhvstL060Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvstL074Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vstvstL158Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstL283Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvstL469Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvstL411Vicia sativa cv. Studenica genome v1.0Vicia sativa
vstvuR287Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvuR302Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvumR288Vigna umbellata FF25 genome v1.0Vigna umbellata
vstvumR301Vigna umbellata FF25 genome v1.0Vigna umbellata
vssvstL574Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvstL595Vicia sativa cv. Studenica genome v1.0Vicia sativa
vasvstL244Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvstL307Vigna angularis cv. Shumari genome v1.a1Vigna angularis

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_014648711.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.009G040500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.008G187900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg54209.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_32207Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_12833Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun09g137100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.Ca_v2.0_14417Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Vum_02G01363.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Hedin2.R1.2g138480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigan.03G135800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va07G025040.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Va04G045890.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vum_03G01045.1Vigna umbellata FF25 genome v1.0Vigna umbellata
XM_058930672.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigun08g114400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_00479Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat5g070520.1Pisum sativum Cameor genome v1aPisum sativum
Vigan.02G172600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigst.02G126400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigst.03G093300drVigStip.JP252948.2.0.Vigst.03G093300Vigna stipulaceagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
nbis-exon-43842drVigStip.JP252948.2.0.nbis-exon-43842Vigna stipulaceaexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
three_prime_utr-6381drVigStip.JP252948.2.0.three_prime_utr-6381Vigna stipulaceathree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-42337drVigStip.JP252948.2.0.cds-42337Vigna stipulaceaCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
five_prime_utr-6782drVigStip.JP252948.2.0.five_prime_utr-6782Vigna stipulaceafive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigStip.JP252948.2.0.Vigst.03G093300.01drVigStip.JP252948.2.0.Vigst.03G093300.01Vigna stipulaceapolypeptide
drVigStip.JP252948.2.0.Vigst.03G093300.01drVigStip.JP252948.2.0.Vigst.03G093300.01-proteinVigna stipulaceapolypeptide


Homology
[Close]
BLAST of Vigst.03G093300.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RMG5|A0A0S3RMG5_PHAAN (GTD-binding domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G135800 PE=4 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 9.484e-63
Identity = 99/102 (97.06%), Postives = 100/102 (98.04%), Query Frame = 0 
Query:    1 MMRKGETASLERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFPLRSAS 102
            MMRKGET S ERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFPLRS+S
Sbjct:    1 MMRKGETTSFERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFPLRSSS 102
[Close]
BLAST of Vigst.03G093300.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UZA3|A0A0L9UZA3_PHAAN (GTD-binding domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g180700 PE=4 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 9.484e-63
Identity = 99/102 (97.06%), Postives = 100/102 (98.04%), Query Frame = 0 
Query:    1 MMRKGETASLERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFPLRSAS 102
            MMRKGET S ERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFPLRS+S
Sbjct:    1 MMRKGETTSFERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFPLRSSS 102
[Close]
BLAST of Vigst.03G093300.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3UDT4|A0A1S3UDT4_VIGRR (Protein RESPONSE TO LOW SULFUR 3-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106764424 PE=4 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 7.635e-62
Identity = 99/102 (97.06%), Postives = 99/102 (97.06%), Query Frame = 0 
Query:    1 MMRKGETASLERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFPLRSAS 102
            MMRKGET SLERELKKRNEELEEELKRSKERED VRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFPLRS S
Sbjct:    1 MMRKGETTSLERELKKRNEELEEELKRSKEREDQVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFPLRSPS 102
[Close]
BLAST of Vigst.03G093300.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6MIJ3|A0A4D6MIJ3_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g2119 PE=4 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 8.889e-59
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0 
Query:    2 MRKGETASLERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFPLRSAS 102
            MRKGET SLE ELKKRNEELEEELKRSKEREDHVR+QLHAALDRLSVAEDAEERLC QLGDLEAEAL QARDYHARIVSLVDQLSQAHSLLNTTFPLRS S
Sbjct:    1 MRKGETTSLESELKKRNEELEEELKRSKEREDHVRNQLHAALDRLSVAEDAEERLCEQLGDLEAEALQQARDYHARIVSLVDQLSQAHSLLNTTFPLRSPS 101
[Close]
BLAST of Vigst.03G093300.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SXU0|A0AA86SXU0_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS22560 PE=4 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.476e-51
Identity = 87/102 (85.29%), Postives = 91/102 (89.22%), Query Frame = 0 
Query:    1 MMRKGETASLERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFPLRSAS 102
            MMRKGET SLE ELKKRN+ELEEELK+SKEREDHVR QL AALDRLS+AEDAEERL  QLGDLEAE LLQARDYHARIVSL+DQLSQAHSLLNTT  L S S
Sbjct:    1 MMRKGETTSLEWELKKRNQELEEELKQSKEREDHVRRQLRAALDRLSIAEDAEERLSVQLGDLEAEGLLQARDYHARIVSLLDQLSQAHSLLNTTISLPSLS 102
[Close]
BLAST of Vigst.03G093300.01 vs. ExPASy TrEMBL (2024)
Match: tr|V7BA44|V7BA44_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G187900g PE=4 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.570e-49
Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 0 
Query:    9 SLERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFPLRSAS 102
            SLEREL+KRNEELEEELKRS+EREDHVR QL AALDRL+VAEDAEERLC QLGDLEAEAL QAR+YHAR+VSLVDQLSQAHSLLNTTFPL S S
Sbjct:    2 SLERELQKRNEELEEELKRSREREDHVRRQLRAALDRLTVAEDAEERLCVQLGDLEAEALQQAREYHARVVSLVDQLSQAHSLLNTTFPLPSPS 95
[Close]
BLAST of Vigst.03G093300.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0K3V7|A0A8T0K3V7_PHAAN (Protein RESPONSE TO LOW SULFUR 2 OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0125910 PE=4 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.650e-47
Identity = 79/81 (97.53%), Postives = 79/81 (97.53%), Query Frame = 0 
Query:    1 MMRKGETASLERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSL 81
            MMRKGET S ERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSL
Sbjct:    1 MMRKGETTSFERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSL 81
[Close]
BLAST of Vigst.03G093300.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371H404|A0A371H404_MUCPR (Protein RESPONSE TO LOW SULFUR 2 (Fragment) OS=Mucuna pruriens OX=157652 GN=LSU2 PE=4 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.786e-44
Identity = 76/89 (85.39%), Postives = 82/89 (92.13%), Query Frame = 0 
Query:    9 SLERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFP 97
            + E ELKKRNEELE+ELK+SKERE+HVR QL AA+DRL VAEDAEERLC+QLGDLEAEAL QARDYHARIVSLVDQLSQAHSLLNTT P
Sbjct:   10 TTEGELKKRNEELEKELKQSKEREEHVRRQLRAAMDRLRVAEDAEERLCSQLGDLEAEALQQARDYHARIVSLVDQLSQAHSLLNTTTP 98
[Close]
BLAST of Vigst.03G093300.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151U0B3|A0A151U0B3_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_005364 PE=4 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.818e-41
Identity = 76/95 (80.00%), Postives = 80/95 (84.21%), Query Frame = 0 
Query:    3 RKGETASLERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFP 97
            R+GETASLE ELKKRNEELEEELK+SKERE+H R QL AALDRL VAEDAEE L +QLG LEAEAL QAR YHARIVSL  QLSQAHSLLN   P
Sbjct:    6 REGETASLEWELKKRNEELEEELKQSKEREEHARRQLRAALDRLRVAEDAEEHLSSQLGSLEAEALQQARHYHARIVSLAAQLSQAHSLLNPLSP 100
[Close]
BLAST of Vigst.03G093300.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8JPU3|A0A8B8JPU3_ABRPR (Protein RESPONSE TO LOW SULFUR 3-like OS=Abrus precatorius OX=3816 GN=LOC113848276 PE=4 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.285e-38
Identity = 69/87 (79.31%), Postives = 80/87 (91.95%), Query Frame = 0 
Query:    4 KGETASLERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHS 90
            +GET +L+  LKKRN+ELEEEL++SKERE+H+R QL  ALDRL +AEDAEERLC+QLGDLEAEALLQARDYHARIVSL+DQLSQAHS
Sbjct:    6 QGETTALQ--LKKRNKELEEELRKSKEREEHMRLQLRVALDRLRIAEDAEERLCSQLGDLEAEALLQARDYHARIVSLMDQLSQAHS 90
[Close]
BLAST of Vigst.03G093300.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FIR9|LSU2_ARATH (Protein RESPONSE TO LOW SULFUR 2 OS=Arabidopsis thaliana OX=3702 GN=LSU2 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 3.697e-13
Identity = 35/85 (41.18%), Postives = 57/85 (67.06%), Query Frame = 0 
Query:   13 ELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFP 97
            EL+++N E+E+ +       + ++ ++     R  VAE+AEERLC+QL +LEAE+L QARDYH+RI+ L+++LS+  S   +  P
Sbjct:   17 ELRRKNGEMEKAV-------EEMKKEMLQLWRRTQVAEEAEERLCSQLAELEAESLDQARDYHSRIIFLMNELSRLSSDSASASP 94
[Close]
BLAST of Vigst.03G093300.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8L8S2|LSU4_ARATH (Protein RESPONSE TO LOW SULFUR 4 OS=Arabidopsis thaliana OX=3702 GN=LSU4 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 4.928e-13
Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 0 
Query:   13 ELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHS 90
            EL+++N E+E+ +       + +R ++     R  VAE+AEE LC+QL +LEAE+L QARDYH RI+ L +QLS+  S
Sbjct:   17 ELRQKNGEMEKAV-------EEMRKEMLQLWRRTQVAEEAEEHLCSQLAELEAESLDQARDYHTRIIFLTNQLSRFSS 87
[Close]
BLAST of Vigst.03G093300.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SCK2|LSU3_ARATH (Protein RESPONSE TO LOW SULFUR 3 OS=Arabidopsis thaliana OX=3702 GN=LSU3 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.430e-12
Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 0 
Query:   45 RLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHS 90
            R  VAE+AEERLC+QL +LE E+L QARDYH+RIV L+DQ+S+  S
Sbjct:   42 RTVVAEEAEERLCSQLAELEVESLDQARDYHSRIVFLMDQISRLSS 87
[Close]
BLAST of Vigst.03G093300.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SCK1|LSU1_ARATH (Protein RESPONSE TO LOW SULFUR 1 OS=Arabidopsis thaliana OX=3702 GN=LSU1 PE=1 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 8.672e-12
Identity = 34/74 (45.95%), Postives = 49/74 (66.22%), Query Frame = 0 
Query:   13 ELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLS 86
            EL++RN EL  E+   K       +++     R  VAE+AEE+LC+QL +LE E+L QARDYH R++ L+DQ+S
Sbjct:   17 ELRRRNIELSREVAEMK-------TEMIKLWQRTVVAEEAEEQLCSQLAELEVESLEQARDYHDRMLFLMDQIS 83
[Close]
BLAST of Vigst.03G093300.01 vs. Araport11
Match: | (Symbols: LSU4 | RESPONSE TO LOW SULFUR 4 | chr5:8440859-8441137 REVERSE LENGTH=92)

HSP 1 Score: 62.3882 bits (150), Expect = 5.104e-14
Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 0 
Query:   13 ELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHS 90
            EL+++N E+E+ +       + +R ++     R  VAE+AEE LC+QL +LEAE+L QARDYH RI+ L +QLS+  S
Sbjct:   17 ELRQKNGEMEKAV-------EEMRKEMLQLWRRTQVAEEAEEHLCSQLAELEAESLDQARDYHTRIIFLTNQLSRFSS 87
[Close]
BLAST of Vigst.03G093300.01 vs. Araport11
Match: | (Symbols: LSU3 | RESPONSE TO LOW SULFUR 3 | chr3:18372659-18372952 REVERSE LENGTH=97)

HSP 1 Score: 61.2326 bits (147), Expect = 1.481e-13
Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 0 
Query:   45 RLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHS 90
            R  VAE+AEERLC+QL +LE E+L QARDYH+RIV L+DQ+S+  S
Sbjct:   42 RTVVAEEAEERLCSQLAELEVESLDQARDYHSRIVFLMDQISRLSS 87
[Close]
BLAST of Vigst.03G093300.01 vs. Araport11
Match: | (Symbols: LSU1 | RESPONSE TO LOW SULFUR 1 | chr3:18375435-18375719 REVERSE LENGTH=94)

HSP 1 Score: 59.3066 bits (142), Expect = 8.977e-13
Identity = 34/74 (45.95%), Postives = 49/74 (66.22%), Query Frame = 0 
Query:   13 ELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLS 86
            EL++RN EL  E+   K       +++     R  VAE+AEE+LC+QL +LE E+L QARDYH R++ L+DQ+S
Sbjct:   17 ELRRRNIELSREVAEMK-------TEMIKLWQRTVVAEEAEEQLCSQLAELEVESLEQARDYHDRMLFLMDQIS 83
[Close]
BLAST of Vigst.03G093300.01 vs. Araport11
Match: | (Symbols: LSU2 | RESPONSE TO LOW SULFUR 2 | chr5:8443472-8443756 REVERSE LENGTH=94)

HSP 1 Score: 59.3066 bits (142), Expect = 1.000e-12
Identity = 31/72 (43.06%), Postives = 51/72 (70.83%), Query Frame = 0 
Query:   13 ELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAEDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQ 84
            EL+++N E+E+ +       + ++ ++     R  VAE+AEERLC+QL +LEAE+L QARDYH+RI+ L+++
Sbjct:   17 ELRRKNGEMEKAV-------EEMKKEMLQLWRRTQVAEEAEERLCSQLAELEAESLDQARDYHSRIIFLMNE 81
[Close]
BLAST of Vigst.03G093300.01 vs. Araport11
Match: | (Symbols: LSU1 | RESPONSE TO LOW SULFUR 1 | chr3:18375435-18375719 REVERSE LENGTH=75)

HSP 1 Score: 49.6766 bits (117), Expect = 3.029e-9
Identity = 23/37 (62.16%), Postives = 32/37 (86.49%), Query Frame = 0 
Query:   50 EDAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLS 86
            E+AEE+LC+QL +LE E+L QARDYH R++ L+DQ+S
Sbjct:   28 EEAEEQLCSQLAELEVESLEQARDYHDRMLFLMDQIS 64
The following BLAST results are available for this feature:
BLAST of Vigst.03G093300.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3RMG5|A0A0S3RMG5_PHAAN9.484e-6397.06GTD-binding domain-containing protein OS=Vigna ang... [more]
tr|A0A0L9UZA3|A0A0L9UZA3_PHAAN9.484e-6397.06GTD-binding domain-containing protein OS=Phaseolus... [more]
tr|A0A1S3UDT4|A0A1S3UDT4_VIGRR7.635e-6297.06Protein RESPONSE TO LOW SULFUR 3-like OS=Vigna rad... [more]
tr|A0A4D6MIJ3|A0A4D6MIJ3_VIGUN8.889e-5994.06Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|A0AA86SXU0|A0AA86SXU0_9FABA1.476e-5185.29Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|V7BA44|V7BA44_PHAVU1.570e-4988.30Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A8T0K3V7|A0A8T0K3V7_PHAAN7.650e-4797.53Protein RESPONSE TO LOW SULFUR 2 OS=Phaseolus angu... [more]
tr|A0A371H404|A0A371H404_MUCPR3.786e-4485.39Protein RESPONSE TO LOW SULFUR 2 (Fragment) OS=Muc... [more]
tr|A0A151U0B3|A0A151U0B3_CAJCA9.818e-4180.00Uncharacterized protein OS=Cajanus cajan OX=3821 G... [more]
tr|A0A8B8JPU3|A0A8B8JPU3_ABRPR2.285e-3879.31Protein RESPONSE TO LOW SULFUR 3-like OS=Abrus pre... [more]
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BLAST of Vigst.03G093300.01 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
sp|Q9FIR9|LSU2_ARATH3.697e-1341.18Protein RESPONSE TO LOW SULFUR 2 OS=Arabidopsis th... [more]
sp|Q8L8S2|LSU4_ARATH4.928e-1344.87Protein RESPONSE TO LOW SULFUR 4 OS=Arabidopsis th... [more]
sp|Q9SCK2|LSU3_ARATH1.430e-1265.22Protein RESPONSE TO LOW SULFUR 3 OS=Arabidopsis th... [more]
sp|Q9SCK1|LSU1_ARATH8.672e-1245.95Protein RESPONSE TO LOW SULFUR 1 OS=Arabidopsis th... [more]
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BLAST of Vigst.03G093300.01 vs. Araport11
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
|5.104e-1444.87Symbols: LSU4 | RESPONSE TO LOW SULFUR 4 | chr5:84... [more]
|1.481e-1365.22Symbols: LSU3 | RESPONSE TO LOW SULFUR 3 | chr3:18... [more]
|8.977e-1345.95Symbols: LSU1 | RESPONSE TO LOW SULFUR 1 | chr3:18... [more]
|1.000e-1243.06Symbols: LSU2 | RESPONSE TO LOW SULFUR 2 | chr5:84... [more]
|3.029e-962.16Symbols: LSU1 | RESPONSE TO LOW SULFUR 1 | chr3:18... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna stipulacea acc. JP252948 genome v1.0
Date Performed: 2024-08-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039282Protein response to low sulfurPANTHERPTHR34283PROTEIN RESPONSE TO LOW SULFUR 1coord: 6..94

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigStip.JP252948.2.0.Vigst.03G093300.01 ID=drVigStip.JP252948.2.0.Vigst.03G093300.01; Name=Vigst.03G093300.01; organism=Vigna stipulacea; type=mRNA; length=309bp
ATGATGAGGAAGGGTGAAACGGCGTCGTTGGAGAGGGAGCTGAAGAAGCG
GAACGAGGAGCTGGAGGAGGAGCTGAAACGGAGCAAGGAGAGGGAGGACC
ACGTGAGGAGCCAGCTCCACGCCGCATTGGATCGCCTCTCCGTGGCGGAG
GACGCGGAGGAACGCCTCTGCGCGCAGCTCGGTGACCTCGAAGCCGAAGC
GCTGCTACAGGCGCGTGACTACCACGCCCGCATCGTTTCACTCGTTGATC
AGCTCTCACAAGCACACTCTCTCCTCAACACCACCTTTCCCCTTCGATCC
GCATCATAA
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protein sequence of drVigStip.JP252948.2.0.Vigst.03G093300.01

>drVigStip.JP252948.2.0.Vigst.03G093300.01 ID=drVigStip.JP252948.2.0.Vigst.03G093300.01; Name=drVigStip.JP252948.2.0.Vigst.03G093300.01; organism=Vigna stipulacea; type=polypeptide; length=103bp
MMRKGETASLERELKKRNEELEEELKRSKEREDHVRSQLHAALDRLSVAE
DAEERLCAQLGDLEAEALLQARDYHARIVSLVDQLSQAHSLLNTTFPLRS
AS*
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mRNA from alignment at Chr03:11262078..11262763-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigStip.JP252948.2.0.Vigst.03G093300.01 ID=drVigStip.JP252948.2.0.Vigst.03G093300.01; Name=Vigst.03G093300.01; organism=Vigna stipulacea; type=mRNA; length=686bp; location=Sequence derived from: Chr03:11262078..11262763- (Vigna stipulacea
CCTGGACACACCAGATTATAACTCCTCCAATCGAGTATTTTAAATAGTGA
ATGAAATCAGAAACGCAGCAGAGGAAGCAAAGGTGATGATGAGGAAGGGT
GAAACGGCGTCGTTGGAGAGGGAGCTGAAGAAGCGGAACGAGGAGCTGGA
GGAGGAGCTGAAACGGAGCAAGGAGAGGGAGGACCACGTGAGGAGCCAGC
TCCACGCCGCATTGGATCGCCTCTCCGTGGCGGAGGACGCGGAGGAACGC
CTCTGCGCGCAGCTCGGTGACCTCGAAGCCGAAGCGCTGCTACAGGCGCG
TGACTACCACGCCCGCATCGTTTCACTCGTTGATCAGCTCTCACAAGCAC
ACTCTCTCCTCAACACCACCTTTCCCCTTCGATCCGCATCATAAATCCAA
AGCTTCTCTCTTTGCATGTTCTTGTGCAGCGTGTCGTTGTTACTGTCCGG
TGTGCAACTGTGCGGTATGAAGTGATATATACCATTACCATCGTAAAATT
CGATGATGTATATGTAGATTCTGTTGTAAAGGTTAAGGTCAAGGTTTGGA
AGTTCCCCAGTTTAATTTCTGGACCGTGTAACATGGATTCTGGATTTCTG
GGTTTAATTTAGATTTCGACCAAATAAATTAAAGTTTTAAAATAATGTGT
ATATATATATATATATATATATATATATATATATAT
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Coding sequence (CDS) from alignment at Chr03:11262078..11262763-

>drVigStip.JP252948.2.0.Vigst.03G093300.01 ID=drVigStip.JP252948.2.0.Vigst.03G093300.01; Name=Vigst.03G093300.01; organism=Vigna stipulacea; type=CDS; length=309bp; location=Sequence derived from: Chr03:11262078..11262763- (Vigna stipulacea
ATGATGAGGAAGGGTGAAACGGCGTCGTTGGAGAGGGAGCTGAAGAAGCG
GAACGAGGAGCTGGAGGAGGAGCTGAAACGGAGCAAGGAGAGGGAGGACC
ACGTGAGGAGCCAGCTCCACGCCGCATTGGATCGCCTCTCCGTGGCGGAG
GACGCGGAGGAACGCCTCTGCGCGCAGCTCGGTGACCTCGAAGCCGAAGC
GCTGCTACAGGCGCGTGACTACCACGCCCGCATCGTTTCACTCGTTGATC
AGCTCTCACAAGCACACTCTCTCCTCAACACCACCTTTCCCCTTCGATCC
GCATCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR039282LSU
Vocabulary: Biological Process
TermDefinition
GO:0098869cellular oxidant detoxification