Vigst.04G225200.01
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RZA2|A0A0S3RZA2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G347700 PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 1.414e-86 Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0 Query: 1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127 MLGKKMVSFKKLAKRVKGVGGFE DPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV Sbjct: 1 MLGKKMVSFKKLAKRVKGVGGFEPDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9U8D0|A0A0L9U8D0_PHAAN (Auxin-responsive protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0054660 PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 1.414e-86 Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0 Query: 1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127 MLGKKMVSFKKLAKRVKGVGGFE DPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV Sbjct: 1 MLGKKMVSFKKLAKRVKGVGGFEPDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TPJ9|A0A1S3TPJ9_VIGRR (Auxin-responsive protein SAUR15 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757523 PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 6.090e-86 Identity = 124/127 (97.64%), Postives = 126/127 (99.21%), Query Frame = 0 Query: 1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127 MLGKKMVSFKKLAKRVKGVGGF+ DPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNA+ECNNGKFDLGKFFAEFV Sbjct: 1 MLGKKMVSFKKLAKRVKGVGGFDPDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAVECNNGKFDLGKFFAEFV 127
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6MB87|A0A4D6MB87_VIGUN (SAUR family protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2789 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 8.504e-79 Identity = 118/127 (92.91%), Postives = 120/127 (94.49%), Query Frame = 0 Query: 1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127 MLGKKMVSFKKLAK+VKGVGGF+ PAHHEGLL NYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEK YNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNG FDLGKFFAEFV Sbjct: 1 MLGKKMVSFKKLAKKVKGVGGFD----PAHHEGLLKNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKAYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGTFDLGKFFAEFV 123
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86V718|A0AA86V718_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS2782 PE=4 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.029e-76 Identity = 114/127 (89.76%), Postives = 119/127 (93.70%), Query Frame = 0 Query: 1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127 MLGK+MVSFKKLAK+VKGVGG LDP PAHHEGLL YEEKC TN+PPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEK YNEFGFSQRNGLVVPC VSTFEEV+NA+ECNNGKFDLGKFFAEFV Sbjct: 1 MLGKRMVSFKKLAKKVKGVGG--LDPDPAHHEGLLKKYEEKCDTNTPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKAYNEFGFSQRNGLVVPCCVSTFEEVVNAVECNNGKFDLGKFFAEFV 125
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445FIS3|A0A445FIS3_GLYSO (Auxin-responsive protein SAUR50 OS=Glycine soja OX=3848 GN=D0Y65_051990 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.330e-74 Identity = 109/127 (85.83%), Postives = 115/127 (90.55%), Query Frame = 0 Query: 1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127 MLGKKMV FKKLAK+VKGV G + DPYPAHHE LL YEE+C N+PPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEK YNEFGFSQRNGLVVPCSVSTF+EV+NAIECNN KFDLGK FAEFV Sbjct: 1 MLGKKMVLFKKLAKKVKGVRGIDPDPYPAHHECLLKEYEEECAINTPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKAYNEFGFSQRNGLVVPCSVSTFQEVVNAIECNNDKFDLGKIFAEFV 127
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|I1NAP8|I1NAP8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100776885 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.330e-74 Identity = 109/127 (85.83%), Postives = 115/127 (90.55%), Query Frame = 0 Query: 1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127 MLGKKMV FKKLAK+VKGV G + DPYPAHHE LL YEE+C N+PPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEK YNEFGFSQRNGLVVPCSVSTF+EV+NAIECNN KFDLGK FAEFV Sbjct: 1 MLGKKMVLFKKLAKKVKGVRGIDPDPYPAHHECLLKEYEEECAINTPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKAYNEFGFSQRNGLVVPCSVSTFQEVVNAIECNNDKFDLGKIFAEFV 127
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|I1L9E9|I1L9E9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100790208 PE=3 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 6.460e-61 Identity = 98/129 (75.97%), Postives = 108/129 (83.72%), Query Frame = 0 Query: 1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEE--KCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127 MLGKKMVS KKLAKRVKGVGG + P + E LL YEE + +++ PTGFFALYVGEERQRYVVPT YLSHPLFKMLLEK YNEFGF+QRNGLVVPCSVSTF+EV+NAIECNNGKFDLGK F +F Sbjct: 1 MLGKKMVSLKKLAKRVKGVGGADHSD-PPYQECLLKGYEEGKESPSSTTPTGFFALYVGEERQRYVVPTSYLSHPLFKMLLEKAYNEFGFAQRNGLVVPCSVSTFQEVVNAIECNNGKFDLGKIFEDFA 128
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|I1JGM8|I1JGM8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100782364 PE=3 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 5.726e-60 Identity = 100/129 (77.52%), Postives = 107/129 (82.95%), Query Frame = 0 Query: 1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEE-KCVTNSP-PTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127 MLGKKMVS KKLAKRVKGVGG + P + E LL YEE K +SP PTGFFALYVGEERQRYVVPT YLSHPLFKMLLEK YNEFGF+QRNGLVVPCSVSTF+EV+NAIECNNG FDLGK F +F Sbjct: 1 MLGKKMVSLKKLAKRVKGVGGADHSD-PPYQECLLKGYEEDKESPSSPTPTGFFALYVGEERQRYVVPTSYLSHPLFKMLLEKAYNEFGFAQRNGLVVPCSVSTFQEVVNAIECNNGNFDLGKIFEDFA 128
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2SEW1|A0A0B2SEW1_GLYSO (Auxin-induced protein 15A OS=Glycine soja OX=3848 GN=D0Y65_004537 PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 5.726e-60 Identity = 100/129 (77.52%), Postives = 107/129 (82.95%), Query Frame = 0 Query: 1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEE-KCVTNSP-PTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127 MLGKKMVS KKLAKRVKGVGG + P + E LL YEE K +SP PTGFFALYVGEERQRYVVPT YLSHPLFKMLLEK YNEFGF+QRNGLVVPCSVSTF+EV+NAIECNNG FDLGK F +F Sbjct: 1 MLGKKMVSLKKLAKRVKGVGGADHSD-PPYQECLLKGYEEDKESPSSPTPTGFFALYVGEERQRYVVPTSYLSHPLFKMLLEKAYNEFGFAQRNGLVVPCSVSTFQEVVNAIECNNGNFDLGKIFEDFA 128
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|O65695|SAU50_ARATH (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.071e-17 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0 Query: 38 YEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAI 110 Y+E C+ P G F +YVGE R RY+VP +L+HP F+ LL++ EFGF GL +PC F+ + + I Sbjct: 34 YDEDCLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SIG9|SAU12_ARATH (Protein SMALL AUXIN UP-REGULATED RNA 12 OS=Arabidopsis thaliana OX=3702 GN=SAUR12 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.430e-15 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0 Query: 38 YEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAI 110 Y+E + P G F +YVGE+R RY+VP +L+HP FK LL++ EFGF+ GL +PC F + + I Sbjct: 31 YDEDGLPVDVPKGHFPVYVGEKRSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|P0DKL1|SAU50_HELAN (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.008e-14 Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 0 Query: 37 NYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTF 103 N ++ + N P G F +YVGE R RY+VP L HP F+ LL+++ EFGF+ G+++PC F Sbjct: 29 NNDDSGLPNDVPKGHFVVYVGERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDF 95
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6NMM4|SAU26_ARATH (Auxin-responsive protein SAUR26 OS=Arabidopsis thaliana OX=3702 GN=SAUR26 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.777e-14 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0 Query: 43 VTNSPPTGFFALYVGE--ERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQ-RNGLVVPCSVSTFEEVLNAIE 111 + +PP GF A+YVGE ++QR+ VP YL+ PLF+ LL K EFGF GL +PC V TF + + ++ Sbjct: 21 TSKAPPKGFLAVYVGESQKKQRHFVPVSYLNQPLFQDLLSKCEEEFGFDHPMGGLTIPCPVDTFISITSQLQ 92
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SRW1|SAU27_ARATH (Auxin-responsive protein SAUR27 OS=Arabidopsis thaliana OX=3702 GN=SAUR27 PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 2.323e-13 Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0 Query: 44 TNSPPTGFFALYVGE--ERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQ-RNGLVVPCSVSTFEEVLNAIE 111 + S P GF A+YVGE ++QRY+V YLS PLF+ LL K+ EFGF GL +PC TF V + I+ Sbjct: 24 STSAPKGFLAVYVGESQKKQRYLVLVSYLSQPLFQDLLSKSEEEFGFDHPMGGLTIPCPEDTFLTVTSRIQ 94
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FXI0|SAU54_ARATH (Protein SMALL AUXIN UP-REGULATED RNA 54 OS=Arabidopsis thaliana OX=3702 GN=SAUR54 PE=2 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 3.221e-13 Identity = 32/102 (31.37%), Postives = 53/102 (51.96%), Query Frame = 0 Query: 9 FKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAI 110 K++ KR +G + Y HE ++ + P G F +YVG R RYV+P +L+ P F++LL++ EFGF GL +PC F+ ++ ++ Sbjct: 15 IKQILKRCSSLGKKQSSEYNDTHE-----HDGDSLPLDVPKGHFVVYVGGNRVRYVLPISFLTRPEFQLLLQQAEEEFGFDHNMGLTIPCEEVAFKSLITSM 111
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q41220|SAU15_ARATH (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 3.288e-13 Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 0 Query: 44 TNSPPTGFFALYVGEERQ---RYVVPTRYLSHPLFKMLLEKTYNEFGFSQ-RNGLVVPCSVSTFEEVLNAIE 111 ++S P GF A+YVGE Q RYVVP YL+ PLF+ LL K+ EFG+ GL +PC S F V + I+ Sbjct: 18 SSSTPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDHPMGGLTIPCHESLFFTVTSQIQ 89
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|O65648|SAUR9_ARATH (Protein SMALL AUXIN UP-REGULATED RNA 9 OS=Arabidopsis thaliana OX=3702 GN=SAUR9 PE=1 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 3.672e-13 Identity = 28/67 (41.79%), Postives = 37/67 (55.22%), Query Frame = 0 Query: 42 CVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLN 108 C N P G F +YVG+ R RYVVP +L H F+ LL+ EFGF GL +PC F +++ Sbjct: 35 CYFNDVPKGHFPVYVGQHRSRYVVPISWLDHHEFQSLLQLAEEEFGFEHEMGLTIPCDEVVFRSLIS 101
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FJF9|SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 4.024e-13 Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 0 Query: 40 EKCVTNSPPTGFFALYVGE-ERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQ-RNGLVVPCSVSTFEEVLNAIE 111 + ++ P GF A+YVGE +++RY+VP YLS P F+ LL K+ EFGF GL +PC TF V + ++ Sbjct: 15 SRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRLQ 88
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FJF6|SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 4.711e-13 Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 0 Query: 42 CVTNSPPTGFFALYVGE-ERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQ-RNGLVVPCSVSTFEEVLNAI 110 ++PP GF A+YVGE +++RY+VP YL+ P F+ LL K+ EFGF GL +PC TF V + + Sbjct: 19 AAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRL 89
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR45 | SMALL AUXIN UPREGULATED RNA 45 | chr2:15186326-15186733 REVERSE LENGTH=135) HSP 1 Score: 125.176 bits (313), Expect = 9.202e-38 Identity = 68/136 (50.00%), Postives = 93/136 (68.38%), Query Frame = 0 Query: 1 MLGKKMVSFKKLAKRVKGV-----GGFELDPYPAHHEGLLNNY--EEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEF-GFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV* 128 MLGK++ SFK LAK++K + G E ++E LL N E + + PTG FA+YVGEER + VVPT YL+HPLF+MLL+K+++EF F Q+ LVVPCS+S F++V+NA+E NG FD G+F EF+* Sbjct: 1 MLGKRIASFKNLAKKMKSINTTTRSGGEGGSESTYNESLLMNEADEAAMMASKTPTGTFAVYVGEERVKRVVPTSYLNHPLFRMLLDKSHDEFLCFEQKVMLVVPCSLSVFQDVVNAVESCNGNFDFGEFVEEFL* 136
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR70 | SMALL AUXIN UPREGULATED RNA 70 | chr5:7044791-7045555 FORWARD LENGTH=165) HSP 1 Score: 81.2629 bits (199), Expect = 3.092e-20 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0 Query: 36 NNYEEKCVTNSPP----TGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECN 113 ++ EE C + PP G A+YVG E +R+++PT YLSH LFK+LLEK EFGF Q L +PC V TF+ +L +E N Sbjct: 64 DSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVETFKYLLKCMENN 145
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR70 | SMALL AUXIN UPREGULATED RNA 70 | chr5:7044791-7045363 FORWARD LENGTH=190) HSP 1 Score: 80.8777 bits (198), Expect = 7.134e-20 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0 Query: 36 NNYEEKCVTNSPP----TGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECN 113 ++ EE C + PP G A+YVG E +R+++PT YLSH LFK+LLEK EFGF Q L +PC V TF+ +L +E N Sbjct: 64 DSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVETFKYLLKCMENN 145
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR18 | SMALL AUXIN UPREGULATED RNA 18 | chr3:19018853-19019173 REVERSE LENGTH=106) HSP 1 Score: 76.6406 bits (187), Expect = 4.613e-19 Identity = 32/64 (50.00%), Postives = 46/64 (71.88%), Query Frame = 0 Query: 47 PPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAI 110 P G+FA+YVG R R+V+P L+HP FKM+L+K+ EFGF Q +GL +PC +TF +L++I Sbjct: 40 PKKGYFAVYVGHFRDRHVIPITSLNHPTFKMMLQKSEEEFGFRQESGLTIPCDQNTFLTLLDSI 103
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR39 | SMALL AUXIN UPREGULATED RNA 39 | chr3:15094644-15095312 FORWARD LENGTH=160) HSP 1 Score: 76.6406 bits (187), Expect = 1.632e-18 Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = 0 Query: 36 NNYEEKCVTNSPP----TGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFD 118 ++ E C + PP G+ A+YVG E +R+++PT +LSH LFK+LLEK E+GF L +PC V TF+ +L IE N+ K D Sbjct: 64 SDEETTCQSPEPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVETFKYLLKCIE-NHPKDD 149
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR11 | SMALL AUXIN UPREGULATED RNA 11 | chr5:26471269-26471658 FORWARD LENGTH=99) HSP 1 Score: 74.3294 bits (181), Expect = 3.149e-18 Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 0 Query: 45 NSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAI 110 N P G F +YVG R R+V+P +L+HP+F+MLL+++ EFGF Q NGL +PC F ++++I Sbjct: 32 NGVPKGHFVVYVGHSRSRHVIPISFLTHPIFQMLLQQSEEEFGFFQDNGLTIPCDEHFFRALISSI 97
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR50 | SMALL AUXIN UPREGULATED RNA 50 | chr4:16582471-16582794 REVERSE LENGTH=107) HSP 1 Score: 73.1738 bits (178), Expect = 9.405e-18 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0 Query: 38 YEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAI 110 Y+E C+ P G F +YVGE R RY+VP +L+HP F+ LL++ EFGF GL +PC F+ + + I Sbjct: 34 YDEDCLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR47 | SMALL AUXIN UPREGULATED RNA 47 | chr3:7055060-7055416 FORWARD LENGTH=118) HSP 1 Score: 72.4034 bits (176), Expect = 2.505e-17 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 0 Query: 45 NSPPTGFFALYVG-EERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVL-NAIECNNGK 116 N P G A+YVG EERQR+V+PT+YL +P F+ L+++ +EFG+ G+ +PC S FEE+L + C+ K Sbjct: 45 NGVPRGHLAVYVGREERQRFVIPTKYLQYPEFRSLMDEVADEFGYDHEGGIHIPCEESVFEEILIRYMSCDKKK 118
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR12 | SMALL AUXIN UPREGULATED RNA 12 | chr2:9089380-9089694 FORWARD LENGTH=104) HSP 1 Score: 69.707 bits (169), Expect = 2.518e-16 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0 Query: 38 YEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAI 110 Y+E + P G F +YVGE+R RY+VP +L+HP FK LL++ EFGF+ GL +PC F + + I Sbjct: 31 YDEDGLPVDVPKGHFPVYVGEKRSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR37 | SMALL AUXIN UPREGULATED RNA 37 | chr4:15193993-15194562 REVERSE LENGTH=189) HSP 1 Score: 71.2478 bits (173), Expect = 3.975e-16 Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 0 Query: 44 TNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNG 115 T + P G+ A+ VG+E +RY +PT YLSH F +LL + EFGF Q L +PC V+ FE +L +E N Sbjct: 77 TTAIPKGYLAVSVGKEEKRYKIPTEYLSHQAFHVLLREAEEEFGFEQAGILRIPCEVAVFESILKIMEDNKS 148 The following BLAST results are available for this feature:
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vigst.04G225200.01 vs. Araport11
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs arabidopsis Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vigna stipulacea acc. JP252948 genome v1.0
Date Performed: 2024-08-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drVigStip.JP252948.2.0.Vigst.04G225200.01 ID=drVigStip.JP252948.2.0.Vigst.04G225200.01; Name=Vigst.04G225200.01; organism=Vigna stipulacea; type=mRNA; length=384bpback to top protein sequence of drVigStip.JP252948.2.0.Vigst.04G225200.01 >drVigStip.JP252948.2.0.Vigst.04G225200.01 ID=drVigStip.JP252948.2.0.Vigst.04G225200.01; Name=drVigStip.JP252948.2.0.Vigst.04G225200.01; organism=Vigna stipulacea; type=polypeptide; length=128bpback to top mRNA from alignment at Chr04:34977523..34978139+ Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drVigStip.JP252948.2.0.Vigst.04G225200.01 ID=drVigStip.JP252948.2.0.Vigst.04G225200.01; Name=Vigst.04G225200.01; organism=Vigna stipulacea; type=mRNA; length=617bp; location=Sequence derived from: Chr04:34977523..34978139+ (Vigna stipulaceaback to top Coding sequence (CDS) from alignment at Chr04:34977523..34978139+ >drVigStip.JP252948.2.0.Vigst.04G225200.01 ID=drVigStip.JP252948.2.0.Vigst.04G225200.01; Name=Vigst.04G225200.01; organism=Vigna stipulacea; type=CDS; length=384bp; location=Sequence derived from: Chr04:34977523..34978139+ (Vigna stipulaceaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|