Vigst.05G083400.01

Transcript Overview


Name	Vigst.05G083400.01
Unique Name	drVigStip.JP252948.2.0.Vigst.05G083400.01
Type	mRNA
Organism	Vigna stipulacea ()
Sequence length	567

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr05	chromosome	Chr05:6652309..6655567 +	Vigna stipulacea acc. JP252948 genome v2.a1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna stipulacea acc. JP252948 genome v2.a1	2024-06-27
Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt TrEMBL	2024-08-17
InterProScan Analysis for Vigna stipulacea acc. JP252948 genome v1.0	2024-08-17
Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt Swissprot	2024-08-17
Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs arabidopsis Araport11	2024-08-17

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
avjvstL118	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anvstL0488	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvstL0637	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvstL0927	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
carvstL046	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
psvstL085	Pisum sativum Cameor genome v1a	Pisum sativum
carvstL605	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
pvvstL627	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
vrvvstL067	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vstvstL082	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vfhvstL094	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vssvstL100	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vssvstL269	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vstvuR399	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vstvuR426	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vfhvstL784	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vstvumR427	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vstvumR450	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vasvstL458	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis

Orthologs


Gene/Transcript	Assembly	Species
Vum_01G01942.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Phvul.006G130622.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Va09G052660.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
rna-TanjilR_31793	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
jg8765.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vum_05G00866.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Vigun03g199300.2	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Vfaba.Hedin2.R1.6g077400.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
evm.Ca_v2.0_17336	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
rna-XM_014662616.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Vigan.05G105200.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
Vigun06g142300.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Vigst.01G182000.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vigst.05G083400	drVigStip.JP252948.2.0.Vigst.05G083400	Vigna stipulacea	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
nbis-exon-71365	drVigStip.JP252948.2.0.nbis-exon-71365	Vigna stipulacea	exon
nbis-exon-71366	drVigStip.JP252948.2.0.nbis-exon-71366	Vigna stipulacea	exon
nbis-exon-71367	drVigStip.JP252948.2.0.nbis-exon-71367	Vigna stipulacea	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
five_prime_utr-11095	drVigStip.JP252948.2.0.five_prime_utr-11095	Vigna stipulacea	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds-68899	drVigStip.JP252948.2.0.cds-68899	Vigna stipulacea	CDS
cds-68900	drVigStip.JP252948.2.0.cds-68900	Vigna stipulacea	CDS
cds-68901	drVigStip.JP252948.2.0.cds-68901	Vigna stipulacea	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drVigStip.JP252948.2.0.Vigst.05G083400.01	drVigStip.JP252948.2.0.Vigst.05G083400.01	Vigna stipulacea	polypeptide
drVigStip.JP252948.2.0.Vigst.05G083400.01	drVigStip.JP252948.2.0.Vigst.05G083400.01-protein	Vigna stipulacea	polypeptide

Homology

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9VDQ5|A0A0L9VDQ5_PHAAN (LOB domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g184900 PE=3 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 2.231e-118
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0

Query:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVVDQASYGSSMW 163
            MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVVDQASYGSSMW
Sbjct:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVVDQASYGSSMW 163

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VIR3|A0A1S3VIR3_VIGRR (LOB domain-containing protein 4 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775488 PE=3 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.608e-117
Identity = 162/163 (99.39%), Postives = 162/163 (99.39%), Query Frame = 0

Query:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVVDQASYGSSMW 163
            MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLP HQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVVDQASYGSSMW
Sbjct:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPTHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVVDQASYGSSMW 163

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3S4E4|A0A0S3S4E4_PHAAN (LOB domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G105200 PE=3 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 3.601e-116
Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0

Query:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQ--DLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVVDQASYGSSMW 163
            MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQ  DLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVVDQASYGSSMW
Sbjct:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQFQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVVDQASYGSSMW 165

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0K8D6|A0A8T0K8D6_PHAAN (LOB domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0071050 PE=3 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.539e-114
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0

Query:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVVDQASYG 159
            MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVVDQASYG
Sbjct:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVVDQASYG 159

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8K5F5|A0A8B8K5F5_ABRPR (LOB domain-containing protein 4 OS=Abrus precatorius OX=3816 GN=LOC113852733 PE=3 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 1.039e-108
Identity = 154/170 (90.59%), Postives = 156/170 (91.76%), Query Frame = 0

Query:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNT-------LDSHVKPIFDMDMVVDQASYGSSMW 163
            MKEGGGRKQG ASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEV HLRVRQNRCFSN GP PTSPTN+       +DSH KPIFDMDMVVDQA YG SMW
Sbjct:    1 MKEGGGRKQGTASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVVHLRVRQNRCFSNPGPGPTSPTNSGSPSSKIMDSHAKPIFDMDMVVDQAEYGGSMW 170

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371I1T7|A0A371I1T7_MUCPR (LOB domain-containing protein 4 (Fragment) OS=Mucuna pruriens OX=157652 GN=LBD4 PE=3 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 5.743e-108
Identity = 158/172 (91.86%), Postives = 158/172 (91.86%), Query Frame = 0

Query:    1 MKEGGG--RKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTN-------TLDSHVKPIFDMDMVVDQASYGSSMW 163
            MKEGGG  RKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSN G RPTSP N       TLDSH KPIFDMDMVVDQASYG SMW
Sbjct:    4 MKEGGGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNIGLRPTSPANTGFPSSKTLDSHPKPIFDMDMVVDQASYGGSMW 175

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy TrEMBL (2024)
Match: tr|I1L0C8|I1L0C8_SOYBN (LOB domain-containing protein OS=Glycine max OX=3847 GN=100794219 PE=3 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 7.805e-108
Identity = 156/170 (91.76%), Postives = 158/170 (92.94%), Query Frame = 0

Query:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTN-------TLDSHVKPIFDMDMVVDQASYGSSMW 163
            MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLA AQAEVAHLRVRQNRCFSNHG RPTSPT+       TLDSH KPIFD+DM VDQASYG SMW
Sbjct:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLARAQAEVAHLRVRQNRCFSNHGLRPTSPTHSGFPSSKTLDSHAKPIFDIDM-VDQASYGGSMW 169

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2QS87|A0A0B2QS87_GLYSO (LOB domain-containing protein 4 OS=Glycine soja OX=3848 GN=D0Y65_022945 PE=3 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 7.805e-108
Identity = 156/170 (91.76%), Postives = 158/170 (92.94%), Query Frame = 0

Query:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTN-------TLDSHVKPIFDMDMVVDQASYGSSMW 163
            MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLA AQAEVAHLRVRQNRCFSNHG RPTSPT+       TLDSH KPIFD+DM VDQASYG SMW
Sbjct:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLARAQAEVAHLRVRQNRCFSNHGLRPTSPTHSGFPSSKTLDSHAKPIFDIDM-VDQASYGGSMW 169

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86VK92|A0AA86VK92_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS19488 PE=4 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.907e-107
Identity = 154/165 (93.33%), Postives = 154/165 (93.33%), Query Frame = 0

Query:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTN-------TLDSHVKPIFDMDMVVDQASY 158
            MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCF NHGP PTSPTN       TLDSH KPIFDMDMVVDQ SY
Sbjct:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFFNHGPTPTSPTNSGFPSSKTLDSHSKPIFDMDMVVDQGSY 165

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445GSR2|A0A445GSR2_GLYSO (LOB domain-containing protein 4 OS=Glycine soja OX=3848 GN=D0Y65_040744 PE=3 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.313e-106
Identity = 153/170 (90.00%), Postives = 156/170 (91.76%), Query Frame = 0

Query:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTN-------TLDSHVKPIFDMDMVVDQASYGSSMW 163
            MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLR RQNRCFS+HG RPTSPT        TLDSH KPIFD+DM VDQ  YG+SMW
Sbjct:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRARQNRCFSHHGLRPTSPTTSGFPSSKTLDSHAKPIFDIDM-VDQVRYGASMW 169

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SHE9|LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 9.944e-75
Identity = 127/176 (72.16%), Postives = 137/176 (77.84%), Query Frame = 0

Query:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHG-------------PRPTSPTNTLDSHVKPIFDMDMVVDQASYGSSMW 163
            MKE   RKQGAASPCAACKLLRRRCAQDCVF+PYFPADEPQKFANVH+VFGASNVNKMLQ+LP+HQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQ QLALAQAEV HLRVRQ+  F  HG              +  SP +      K +F    +VD+AS G SMW
Sbjct:    1 MKESS-RKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCPDSPSSSGSPSSKQVSPQDN-----KGMFSHMDIVDEASLGESMW 170

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SA51|LBD3_ARATH (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 5.453e-57
Identity = 95/167 (56.89%), Postives = 113/167 (67.66%), Query Frame = 0

Query:    1 MKEGGGRKQGAASPCAACKLLRRRCAQD-CVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVV---DQASYGSSMW 163
            M++ G R     SPCA CKLLRR+C +D CVFAPYFPA EP KFA VHK+FGASNVNKMLQ+L  + R DAV SMVYEANAR++DPVYGCVG ISSL +Q++ LQTQLA AQAE+ H+R           P  T+ T T  S+     D+DM V   D A  G  +W
Sbjct:    1 MRQKGHRHGRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRTLHR--IHTKPPPYTASTVTFPSNKDFYSDIDMAVAYTDDA--GDFLW 163

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8LBW3|LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 7.625e-56
Identity = 81/117 (69.23%), Postives = 100/117 (85.47%), Query Frame = 0

Query:   12 ASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNH 128
            +SPCA+CKLLRRRCA+DC+FAPYFP D+P KFA VHKVFGASNV+KMLQ+LP+HQR DAV+S+V+EANARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE+  ++++      +H
Sbjct:    6 SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSH 122

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FML4|LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.352e-47
Identity = 71/104 (68.27%), Postives = 84/104 (80.77%), Query Frame = 0

Query:   13 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAH 116
            SPCAACK LRR+C   C+FAPYFP +EP KFANVHK+FGASNV K+L +L  HQR DAV+S+ YEA ARVRDPVYGCVGAIS LQ+Q+  LQ +L  A A++AH
Sbjct:   10 SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAH 113

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LQR0|LBD1_ARATH (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 5.984e-46
Identity = 77/157 (49.04%), Postives = 100/157 (63.69%), Query Frame = 0

Query:   13 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVVDQASYGSSM-WKKKYW 168
            SPCAACK+LRRRCA+ CV APYFP  +P KF   H+VFGASN+ K LQ+LP  QR DAV+SMVYEA AR+RDPVYGC GAI  LQ+Q+  LQ QLA AQ E+ +++ +++                 D+      D+  + D+++  SSM W    W
Sbjct:   32 SPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWWDPLW 188

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8L8Q3|LBD25_ARATH (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 4.580e-45
Identity = 66/102 (64.71%), Postives = 83/102 (81.37%), Query Frame = 0

Query:   13 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEV 114
            SPCAACK LRR+C  DCVFAPYFP +EP KFANVH++FGASNV+K+L ++  HQR DAV+S+ YEA AR++DPVYGCVGAIS LQ+Q+  LQ +L    A++
Sbjct:   38 SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADL 139

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SK08|LBD11_ARATH (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 7.449e-44
Identity = 68/110 (61.82%), Postives = 84/110 (76.36%), Query Frame = 0

Query:   13 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQN 122
            SPCAACK+LRRRCA  CV APYFP  +P KF   H+VFGASN+ K LQ+LP  QR DAV+SMVYEA AR+RDPVYGC GAI  LQ+Q+  LQ QLA  Q E+  ++++++
Sbjct:   54 SPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRS 163

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9AT61|LBD13_ARATH (LOB domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=LBD13 PE=1 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.173e-43
Identity = 66/109 (60.55%), Postives = 83/109 (76.15%), Query Frame = 0

Query:    6 GRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEV 114
            G      +PCAACKLLRRRCA++C F+PYF   EP KFA VHKVFGASNV+KML ++   QRGDA +S+VYEAN R+RDP+YGC+GAIS+LQ  I  LQ++L   + E+
Sbjct:   44 GTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEI 152

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|O64836|LBD10_ARATH (LOB domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=LBD10 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.604e-42
Identity = 66/105 (62.86%), Postives = 80/105 (76.19%), Query Frame = 0

Query:   11 AASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVA 115
            A++PCAACKLLRR+C Q+CVFAPYFP   PQKF  VH+VFGASNV K+L DLP  QR D V+S+ YEA AR+RDP+YGCVG IS LQQ +  +Q  L  A+ E+ 
Sbjct:    2 ASTPCAACKLLRRKCTQECVFAPYFPPTNPQKFIFVHRVFGASNVTKILNDLPPDQREDTVNSLFYEAEARIRDPIYGCVGLISFLQQYLKKIQQDLLTAKEELV 106

[Close]

BLAST of Vigst.05G083400.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q32SG3|LBD6_MAIZE (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.527e-42
Identity = 67/106 (63.21%), Postives = 80/106 (75.47%), Query Frame = 0

Query:   10 GAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVA 115
            G  SPCAACK LRR+C  DCVFAPYFP D PQKF +VH+VFGASNV K+L +L   QR DAV+S+ YEA+ R+RDPVYGCVG IS LQ  +  LQ  LA A+ E++
Sbjct:   29 GTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELS 134

[Close]

BLAST of Vigst.05G083400.01 vs. Araport11
Match: | (Symbols: LBD4 | LOB domain-containing protein 4 | chr1:11213107-11214032 FORWARD LENGTH=172)

HSP 1 Score: 225.328 bits (573), Expect = 1.039e-75
Identity = 127/176 (72.16%), Postives = 137/176 (77.84%), Query Frame = 0

Query:    1 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHG-------------PRPTSPTNTLDSHVKPIFDMDMVVDQASYGSSMW 163
            MKE   RKQGAASPCAACKLLRRRCAQDCVF+PYFPADEPQKFANVH+VFGASNVNKMLQ+LP+HQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQ QLALAQAEV HLRVRQ+  F  HG              +  SP +      K +F    +VD+AS G SMW
Sbjct:    1 MKESS-RKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCPDSPSSSGSPSSKQVSPQDN-----KGMFSHMDIVDEASLGESMW 170

[Close]

BLAST of Vigst.05G083400.01 vs. Araport11
Match: | (Symbols: ASL9, LBD3 | LOB DOMAIN-CONTAINING PROTEIN 3, ASYMMETRIC LEAVES 2-like 9 | chr1:5651470-5652839 REVERSE LENGTH=165)

HSP 1 Score: 179.874 bits (455), Expect = 5.689e-58
Identity = 95/167 (56.89%), Postives = 113/167 (67.66%), Query Frame = 0

Query:    1 MKEGGGRKQGAASPCAACKLLRRRCAQD-CVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVV---DQASYGSSMW 163
            M++ G R     SPCA CKLLRR+C +D CVFAPYFPA EP KFA VHK+FGASNVNKMLQ+L  + R DAV SMVYEANAR++DPVYGCVG ISSL +Q++ LQTQLA AQAE+ H+R           P  T+ T T  S+     D+DM V   D A  G  +W
Sbjct:    1 MRQKGHRHGRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRTLHR--IHTKPPPYTASTVTFPSNKDFYSDIDMAVAYTDDA--GDFLW 163

[Close]

BLAST of Vigst.05G083400.01 vs. Araport11
Match: | (Symbols: PCK1, ASL5, LBD12 | PEACOCK 1 | chr2:12868740-12869684 FORWARD LENGTH=193)

HSP 1 Score: 177.948 bits (450), Expect = 7.950e-57
Identity = 81/117 (69.23%), Postives = 100/117 (85.47%), Query Frame = 0

Query:   12 ASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNH 128
            +SPCA+CKLLRRRCA+DC+FAPYFP D+P KFA VHKVFGASNV+KMLQ+LP+HQR DAV+S+V+EANARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE+  ++++      +H
Sbjct:    6 SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSH 122

[Close]

BLAST of Vigst.05G083400.01 vs. Araport11
Match: | (Symbols: LOB | LATERAL ORGAN BOUNDARIES | chr5:25308723-25309283 REVERSE LENGTH=186)

HSP 1 Score: 155.606 bits (392), Expect = 4.533e-48
Identity = 71/104 (68.27%), Postives = 84/104 (80.77%), Query Frame = 0

Query:   13 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAH 116
            SPCAACK LRR+C   C+FAPYFP +EP KFANVHK+FGASNV K+L +L  HQR DAV+S+ YEA ARVRDPVYGCVGAIS LQ+Q+  LQ +L  A A++AH
Sbjct:   10 SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAH 113

[Close]

Query:   13 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAH 116
            SPCAACK LRR+C   C+FAPYFP +EP KFANVHK+FGASNV K+L +L  HQR DAV+S+ YEA ARVRDPVYGCVGAIS LQ+Q+  LQ +L  A A++AH
Sbjct:   10 SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAH 113

[Close]

Query:   13 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAH 116
            SPCAACK LRR+C   C+FAPYFP +EP KFANVHK+FGASNV K+L +L  HQR DAV+S+ YEA ARVRDPVYGCVGAIS LQ+Q+  LQ +L  A A++AH
Sbjct:   10 SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAH 113

[Close]

Query:   13 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAH 116
            SPCAACK LRR+C   C+FAPYFP +EP KFANVHK+FGASNV K+L +L  HQR DAV+S+ YEA ARVRDPVYGCVGAIS LQ+Q+  LQ +L  A A++AH
Sbjct:   10 SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAH 113

[Close]

BLAST of Vigst.05G083400.01 vs. Araport11
Match: | (Symbols: LBD1 | LOB domain-containing protein 1 | chr1:2442624-2443631 FORWARD LENGTH=190)

HSP 1 Score: 152.91 bits (385), Expect = 6.230e-47
Identity = 77/157 (49.04%), Postives = 100/157 (63.69%), Query Frame = 0

Query:   13 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVVDQASYGSSM-WKKKYW 168
            SPCAACK+LRRRCA+ CV APYFP  +P KF   H+VFGASN+ K LQ+LP  QR DAV+SMVYEA AR+RDPVYGC GAI  LQ+Q+  LQ QLA AQ E+ +++ +++                 D+      D+  + D+++  SSM W    W
Sbjct:   32 SPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWWDPLW 188

[Close]

BLAST of Vigst.05G083400.01 vs. Araport11
Match: | (Symbols: LBD25 | LOB domain-containing protein 25 | chr3:10238731-10240346 FORWARD LENGTH=159)

HSP 1 Score: 149.443 bits (376), Expect = 4.772e-46
Identity = 66/102 (64.71%), Postives = 83/102 (81.37%), Query Frame = 0

Query:   13 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEV 114
            SPCAACK LRR+C  DCVFAPYFP +EP KFANVH++FGASNV+K+L ++  HQR DAV+S+ YEA AR++DPVYGCVGAIS LQ+Q+  LQ +L    A++
Sbjct:   38 SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADL 139

[Close]

BLAST of Vigst.05G083400.01 vs. Araport11
Match: | (Symbols: LBD11 | LOB domain-containing protein 11 | chr2:12186603-12188110 REVERSE LENGTH=232)

HSP 1 Score: 148.673 bits (374), Expect = 7.741e-45
Identity = 68/110 (61.82%), Postives = 84/110 (76.36%), Query Frame = 0

Query:   13 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQN 122
            SPCAACK+LRRRCA  CV APYFP  +P KF   H+VFGASN+ K LQ+LP  QR DAV+SMVYEA AR+RDPVYGC GAI  LQ+Q+  LQ QLA  Q E+  ++++++
Sbjct:   54 SPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRS 163

The following BLAST results are available for this feature:

BLAST of Vigst.05G083400.01 vs. ExPASy TrEMBL (2024)
BLAST of Vigst.05G083400.01 vs. ExPASy Swiss-Prot (2024)
BLAST of Vigst.05G083400.01 vs. Araport11

BLAST of Vigst.05G083400.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A0L9VDQ5\|A0A0L9VDQ5_PHAAN	2.231e-118	100.00	LOB domain-containing protein OS=Phaseolus angular...	[more]
tr\|A0A1S3VIR3\|A0A1S3VIR3_VIGRR	1.608e-117	99.39	LOB domain-containing protein 4 OS=Vigna radiata v...	[more]
tr\|A0A0S3S4E4\|A0A0S3S4E4_PHAAN	3.601e-116	98.79	LOB domain-containing protein OS=Vigna angularis v...	[more]
tr\|A0A8T0K8D6\|A0A8T0K8D6_PHAAN	1.539e-114	100.00	LOB domain-containing protein OS=Phaseolus angular...	[more]
tr\|A0A8B8K5F5\|A0A8B8K5F5_ABRPR	1.039e-108	90.59	LOB domain-containing protein 4 OS=Abrus precatori...	[more]
tr\|A0A371I1T7\|A0A371I1T7_MUCPR	5.743e-108	91.86	LOB domain-containing protein 4 (Fragment) OS=Mucu...	[more]
tr\|I1L0C8\|I1L0C8_SOYBN	7.805e-108	91.76	LOB domain-containing protein OS=Glycine max OX=38...	[more]
tr\|A0A0B2QS87\|A0A0B2QS87_GLYSO	7.805e-108	91.76	LOB domain-containing protein 4 OS=Glycine soja OX...	[more]
tr\|A0AA86VK92\|A0AA86VK92_9FABA	1.907e-107	93.33	Uncharacterized protein OS=Sphenostylis stenocarpa...	[more]
tr\|A0A445GSR2\|A0A445GSR2_GLYSO	2.313e-106	90.00	LOB domain-containing protein 4 OS=Glycine soja OX...	[more]

BLAST of Vigst.05G083400.01 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
sp\|Q9SHE9\|LBD4_ARATH	9.944e-75	72.16	LOB domain-containing protein 4 OS=Arabidopsis tha...	[more]
sp\|Q9SA51\|LBD3_ARATH	5.453e-57	56.89	LOB domain-containing protein 3 OS=Arabidopsis tha...	[more]
sp\|Q8LBW3\|LBD12_ARATH	7.625e-56	69.23	LOB domain-containing protein 12 OS=Arabidopsis th...	[more]
sp\|Q9FML4\|LOB_ARATH	4.352e-47	68.27	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis th...	[more]
sp\|Q9LQR0\|LBD1_ARATH	5.984e-46	49.04	LOB domain-containing protein 1 OS=Arabidopsis tha...	[more]
sp\|Q8L8Q3\|LBD25_ARATH	4.580e-45	64.71	LOB domain-containing protein 25 OS=Arabidopsis th...	[more]
sp\|Q9SK08\|LBD11_ARATH	7.449e-44	61.82	LOB domain-containing protein 11 OS=Arabidopsis th...	[more]
sp\|Q9AT61\|LBD13_ARATH	1.173e-43	60.55	LOB domain-containing protein 13 OS=Arabidopsis th...	[more]
sp\|O64836\|LBD10_ARATH	1.604e-42	62.86	LOB domain-containing protein 10 OS=Arabidopsis th...	[more]
sp\|Q32SG3\|LBD6_MAIZE	3.527e-42	63.21	LOB domain-containing protein 6 OS=Zea mays OX=457...	[more]

BLAST of Vigst.05G083400.01 vs. Araport11
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs arabidopsis Araport11)
Total hits: 10


Match Name	E-value	Identity	Description
\|	1.039e-75	72.16	Symbols: LBD4 \| LOB domain-containing protein 4 \| ...	[more]
\|	5.689e-58	56.89	Symbols: ASL9, LBD3 \| LOB DOMAIN-CONTAINING PROTEI...	[more]
\|	7.950e-57	69.23	Symbols: PCK1, ASL5, LBD12 \| PEACOCK 1 \| chr2:1286...	[more]
\|	4.533e-48	68.27	Symbols: LOB \| LATERAL ORGAN BOUNDARIES \| chr5:253...	[more]
\|	4.533e-48	68.27	Symbols: LOB \| LATERAL ORGAN BOUNDARIES \| chr5:253...	[more]
\|	4.533e-48	68.27	Symbols: LOB \| LATERAL ORGAN BOUNDARIES \| chr5:253...	[more]
\|	4.533e-48	68.27	Symbols: LOB \| LATERAL ORGAN BOUNDARIES \| chr5:253...	[more]
\|	6.230e-47	49.04	Symbols: LBD1 \| LOB domain-containing protein 1 \| ...	[more]
\|	4.772e-46	64.71	Symbols: LBD25 \| LOB domain-containing protein 25 ...	[more]
\|	7.741e-45	61.82	Symbols: LBD11 \| LOB domain-containing protein 11 ...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna stipulacea acc. JP252948 genome v1.0
Date Performed: 2024-08-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 14..111 e-value: 5.5E-40 score: 147.3
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 13..114 score: 26.586979
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 12..124

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr05:6652309..6655567+
coding sequence from alignment at Chr05:6652309..6655567+

mRNA sequence

>drVigStip.JP252948.2.0.Vigst.05G083400.01 ID=drVigStip.JP252948.2.0.Vigst.05G083400.01; Name=Vigst.05G083400.01; organism=Vigna stipulacea; type=mRNA; length=567bp
ATGAAGGAAGGTGGTGGGAGAAAGCAGGGTGCAGCTTCACCCTGTGCTGC
ATGCAAGCTTCTCAGAAGAAGGTGTGCTCAAGATTGTGTTTTTGCTCCAT
ATTTTCCAGCAGATGAACCTCAAAAGTTTGCAAATGTTCACAAGGTCTTT
GGTGCTAGCAATGTCAACAAAATGCTTCAGGACCTGCCAATGCATCAAAG
AGGGGATGCAGTGAGTAGCATGGTGTACGAGGCTAATGCCAGAGTCCGAG
ACCCAGTTTATGGGTGTGTTGGGGCCATCTCTTCTCTTCAGCAACAGATT
GATGTGCTACAGACCCAATTGGCCCTGGCCCAGGCTGAGGTGGCCCATCT
CAGGGTGAGGCAAAATAGGTGTTTTTCCAATCATGGGCCTAGACCTACAA
GCCCAACCAATACCTTGGACTCACATGTCAAGCCCATTTTTGACATGGAC
ATGGTGGTGGATCAGGCCAGCTATGGGAGTTCAATGTGGAAAAAAAAATA
TTGGCCTACACTTTCACTTGGTGGGTGTCGGAGTGGTGGTGCCGGTGGTG
GCCGGGCACCGTGGTGA

protein sequence of drVigStip.JP252948.2.0.Vigst.05G083400.01

>drVigStip.JP252948.2.0.Vigst.05G083400.01 ID=drVigStip.JP252948.2.0.Vigst.05G083400.01; Name=drVigStip.JP252948.2.0.Vigst.05G083400.01; organism=Vigna stipulacea; type=polypeptide; length=189bp
MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVF
GASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQI
DVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMD
MVVDQASYGSSMWKKKYWPTLSLGGCRSGGAGGGRAPW*

mRNA from alignment at Chr05:6652309..6655567+

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>drVigStip.JP252948.2.0.Vigst.05G083400.01 ID=drVigStip.JP252948.2.0.Vigst.05G083400.01; Name=Vigst.05G083400.01; organism=Vigna stipulacea; type=mRNA; length=3259bp; location=Sequence derived from: Chr05:6652309..6655567+ (Vigna stipulacea
CTTTTGTTCACTTTCAAAGTATTTTTCTTCCTCCATTCACCATTTTTCCA
TTGTTATATGTGTTGTGTCTTATTACCCATTCTTTTGTACCGACACTCCT
TTTTTCCCACCGTTTAGTTTCTCTGATAGAGAAGGCAAAAACAGAAGAAA
AAATCGGTTTGAAAGAGTGATTGCAGGTAGAATTGATGAAGGAAGGTGGT
GGGAGAAAGCAGGGTGCAGCTTCACCCTGTGCTGCATGCAAGCTTCTCAG
AAGAAGGTGTGCTCAAGATTGTGTTTTTGCTCCATATTTTCCAGCAGATG
AACCTCAAAAGTTTGCAAATGTTCACAAGGTCTTTGGTGCTAGCAATGTC
AACAAAATGCTTCAGGTTCTCTCTCTGTTTTTTTTTTTTTTAATTATTCC
CAATTTTCACTACCCCACATGTCTTTTTTATCGTCAATGTTCATTATTAT
AAATGGTTTTTCATTGCTTCTCATTTTTTTCGGACTTATTTTTAATTCTT
ACTAAGTAGGTTTCAAAATTCAAACATGGTTTATGTCATTCATAATAGAA
TTAAATATGATTTTAATTCTTCAACTATTACTTATTTTTTATTTTAATTT
CTATTCGAAACATTAATGGTTTTTAGTTCTTCTTTTGAAACTCTTTCTTT
TAATCCTTAAAATCGTACGACGTTAAATAATAGTATACGTGTCAAACAGC
AGAGGTTCGTTGAATGTCAGTTTTTCTTTTTACTGGTTGCCACGTGTATT
GTTATTTAACACTGTCCAGTTTTAAGAACTAAAACTGAGAGTTTATAAAC
AAAGAGAACTAAAAATCATTGATGTTTCGAGTAGAAACTAAAACAAAAAA
TGAGTGATAATTTAGATATTAAAATCATATTTAACCCTTCGTAATATCAT
GTGTAACAAAATGAAATGTCTTATGTTATGTTGTTCTCTTTTGTTATTAT
TCAGATGAAATTTAATTAAAGCTTTATTGTTTTGGAGTTTTAAGTTTTAA
AGTGATAGCAAAGGTTATTGATACCAATAATATTTAAACTAACGGTCAAA
ACCTACCTAATTAATCTAATTAGATTCTTTATTTCTAACATGTTTGAAAG
TAAGACATTTAAGATAAAGATTAATTGGTATAGTTGTATTAACCTATTCT
TATACACATTTGGAAAAGGAAAATTACTAAATAAAAAAATCAACTTGAAA
ATCGTCAAAAGCAGTCAATTTGTAGGACTTGTATATAAATTAATACAAAC
ATACATTCAAGTATTCAAATATTCAAATACAATTTTCAAAACAAGATTGA
ACTACAACACTTGTTTATTATTTATATTAATGCAATGTACCTTGTGTTTT
TATTCATAGTTCTTGTCACAAATATAAAACTTCTTTTATCTTAAAATGTA
TAGAGCTTTTATGTAATATTTTATATACTTGTCCATTTCCTAGATTTATA
AACATTAAAAGAGTTTTAATTGTCTTAATTAATTATAACACGTATGTTAG
GTAAAAGAAATCCTATTTATTTTTTAATATTATGATTTAACTTATACGAA
AAAATTTATAAGTTATTTTTGAGTCTTTCGCCCCTTTTACTTAGTGATAG
GTCGTTGAAAAATTTTCACTCTTTTGAGCATAACATAAAGGCATCTATAC
TAAAATCTTGGGGGCACGCCATGTGAAAGGAGATCTTCAAATTATTCCAA
TGTAATCCAATCATAATTATATTGTTTTAGAGAGACAAATACGATTAGAG
GAGAGTTTGATAATTAATTTACCATGGATGGTTTTCCTTATATTAAAACA
AAATAAAGGTAGAGTAATTTAGGTATCTCCTAAAGGAAGCAAGAATAATT
TATCCAATATATGAAAGAAAATAGTGAAATATTTGAAAAGAGTTACTTAA
AGACACAGCAAAACCCAACCCTTTGAAAGTTTAAGGAAAGACCAAGAAGA
TTGGATGCATTATCTTTCATCATAATCTCTTTGTCTGCTCTTAATTTTAA
TCTGTCTTTTCATGTTTTGATAGAGATGACAACACTGTCTTGCCGCCCAA
AGTGTAAATTTTGTAATTTTAATTTAAGAAAAAAGCATCTCAAGTGTTTT
AAAGTTTAAAGTTAAACCCCCCACCACATCTTTTGCAAAAATTTCTACAC
CTAAAAGTCCCATCTAATATCTGTTTTTCTTTTCAAATATACATCAACAA
AACTTACAATGTTTTGGATTCTTTAAAACCCTTTTAATTAATCACATTGA
TTATTATGTTGGGTACGTAATATTAAAAAAATAGAATATCATATAAAAAT
AAATAAAAACTAATTAATTTATTGTGTTAAAGTTTTAAACAGATGTTAAT
TTCTTATATGATTAGATATGTTGTGTTTTTTCAGTAAATTTCTTCTCTCT
CTTTATATACTTAACATGAATGAATGATTAACAGTTGAATATGTCTGATT
AAGCTTTTTTAATTTTTCTTTCTTTTTAAAAACTTAACCTTTTATTTTCT
TTCATTATGATTTGGGTATATGGGGGAGCCAATGGGAGATTGGAAACGTG
ATGTTGGCACCCAAAGTCAAAGTGAAGCAAGAATTGCAGCGTTTGTGAAA
CAGAAACGATAGTTTTCTTTTTACCATTTATTTATGTTATATTATATTAT
CTTGTTCACTCAATAAAAAAAGAAAGAAAAATATGAGATGAAATTACTTA
TGATAAAAATAAAATGAAAAAAAAATTGTATTTTTTGTTTTTAATGAAAG
CATAATAAGTTTGAATTGTTTTCAGGACCTGCCAATGCATCAAAGAGGGG
ATGCAGTGAGTAGCATGGTGTACGAGGCTAATGCCAGAGTCCGAGACCCA
GTTTATGGGTGTGTTGGGGCCATCTCTTCTCTTCAGCAACAGATTGATGT
GCTACAGACCCAATTGGCCCTGGCCCAGGCTGAGGTGGCCCATCTCAGGG
TGAGGCAAAATAGGTGTTTTTCCAATCATGGGCCTAGACCTACAAGCCCA
ACCAATACCTTGGACTCACATGTCAAGCCCATTTTTGACATGGACATGGT
GGTGGATCAGGCCAGCTATGGGAGTTCAATGTGGTAATGACTTATATACA
TACTTCATGATAATACTTATTATTATTATTATTATTATTATAATAGTATA
GTTAGTAAGTACCTATTTAGTAGAGCATAGGAAAAAAAAATATTGGCCTA
CACTTTCACTTGGTGGGTGTCGGAGTGGTGGTGCCGGTGGTGGCCGGGCA
CCGTGGTGA

Coding sequence (CDS) from alignment at Chr05:6652309..6655567+

>drVigStip.JP252948.2.0.Vigst.05G083400.01 ID=drVigStip.JP252948.2.0.Vigst.05G083400.01; Name=Vigst.05G083400.01; organism=Vigna stipulacea; type=CDS; length=567bp; location=Sequence derived from: Chr05:6652309..6655567+ (Vigna stipulacea
ATGAAGGAAGGTGGTGGGAGAAAGCAGGGTGCAGCTTCACCCTGTGCTGC
ATGCAAGCTTCTCAGAAGAAGGTGTGCTCAAGATTGTGTTTTTGCTCCAT
ATTTTCCAGCAGATGAACCTCAAAAGTTTGCAAATGTTCACAAGGTCTTT
GGTGCTAGCAATGTCAACAAAATGCTTCAGGACCTGCCAATGCATCAAAG
AGGGGATGCAGTGAGTAGCATGGTGTACGAGGCTAATGCCAGAGTCCGAG
ACCCAGTTTATGGGTGTGTTGGGGCCATCTCTTCTCTTCAGCAACAGATT
GATGTGCTACAGACCCAATTGGCCCTGGCCCAGGCTGAGGTGGCCCATCT
CAGGGTGAGGCAAAATAGGTGTTTTTCCAATCATGGGCCTAGACCTACAA
GCCCAACCAATACCTTGGACTCACATGTCAAGCCCATTTTTGACATGGAC
ATGGTGGTGGATCAGGCCAGCTATGGGAGTTCAATGTGGAAAAAAAAATA
TTGGCCTACACTTTCACTTGGTGGGTGTCGGAGTGGTGGTGCCGGTGGTG
GCCGGGCACCGTGGTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004883	LOB

Search form

Vigst.05G083400.01