Vigst.10G132000.01
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vigst.10G132000.01 vs. ExPASy TrEMBL (2024)
Match: tr|V7BX21|V7BX21_PHAVU (Transcription factor TFIIIC triple barrel domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G083100g PE=4 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.363e-66 Identity = 108/131 (82.44%), Postives = 115/131 (87.79%), Query Frame = 0 Query: 21 RNMEANSNSASYEHQDQDEYVLLDLESVYNLINLPANAKYVLSDLDTLNPILIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHED----EETRFRR-RLIDSSQTPPTKQVKPFCQVHKILKFKLSPDSEI 146 RNMEANS ASYEH+DQDEYVLLDL+SV NLINLPANAKYVL+ LDTLNP+LIIDDKFKLIG+YEESIGTCLAFTEQD PVVHE+ E F R RLIDSSQ PPTKQVKP CQ+HKILKFKLSPDSEI Sbjct: 3 RNMEANS--ASYEHEDQDEYVLLDLDSVSNLINLPANAKYVLTGLDTLNPVLIIDDKFKLIGEYEESIGTCLAFTEQDTPVVHEETGSSEVNLFSRTRLIDSSQ-PPTKQVKPLCQLHKILKFKLSPDSEI 130
BLAST of Vigst.10G132000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SIB0|A0A0S3SIB0_PHAAN (Transcription factor TFIIIC triple barrel domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G128700 PE=4 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 4.170e-65 Identity = 109/131 (83.21%), Postives = 115/131 (87.79%), Query Frame = 0 Query: 23 MEANSNSASYEHQDQDEYVLLDLESVYNLINLPANAKYVLSDLDTLNPILIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHED----EETRFRR-RLIDSSQTPPTKQVKPFCQVHKILKFKLSPDSEIAT 148 MEANS ASYEH+DQDEYVLLDL+SV +LINLPANAKYVL+ LDTLNP LIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHE+ E F R RLIDSSQT PTKQVKPFCQ+HKILKFKLSPDSEI T Sbjct: 1 MEANS--ASYEHEDQDEYVLLDLDSVSDLINLPANAKYVLTGLDTLNPELIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHEETGSSEVNLFSRTRLIDSSQT-PTKQVKPFCQLHKILKFKLSPDSEIHT 128
BLAST of Vigst.10G132000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9ULQ1|A0A0L9ULQ1_PHAAN (Transcription factor TFIIIC triple barrel domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0240480 PE=4 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 4.170e-65 Identity = 109/131 (83.21%), Postives = 115/131 (87.79%), Query Frame = 0 Query: 23 MEANSNSASYEHQDQDEYVLLDLESVYNLINLPANAKYVLSDLDTLNPILIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHED----EETRFRR-RLIDSSQTPPTKQVKPFCQVHKILKFKLSPDSEIAT 148 MEANS ASYEH+DQDEYVLLDL+SV +LINLPANAKYVL+ LDTLNP LIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHE+ E F R RLIDSSQT PTKQVKPFCQ+HKILKFKLSPDSEI T Sbjct: 1 MEANS--ASYEHEDQDEYVLLDLDSVSDLINLPANAKYVLTGLDTLNPELIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHEETGSSEVNLFSRTRLIDSSQT-PTKQVKPFCQLHKILKFKLSPDSEIHT 128
BLAST of Vigst.10G132000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3UDM1|A0A1S3UDM1_VIGRR (Uncharacterized protein LOC106764293 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106764293 PE=4 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 8.117e-64 Identity = 105/131 (80.15%), Postives = 113/131 (86.26%), Query Frame = 0 Query: 23 MEANSNSASYEHQDQDEYVLLDLESVYNLINLPANAKYVLSDLDTLNPILIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHED----EETRFRR-RLIDSSQTPPTKQVKPFCQVHKILKFKLSPDSEIAT 148 MEANS ASYEH+DQDEYVLLDL+SV N IN PANAKYVL+ LDTLNP+LIIDDKFKLIGQYEESIGTCLAFTEQDAP+VHE+ E F R RLIDSSQT PTKQVKP CQ+HKILKFKLSPDSEI + Sbjct: 1 MEANS--ASYEHEDQDEYVLLDLDSVSNFINFPANAKYVLTGLDTLNPVLIIDDKFKLIGQYEESIGTCLAFTEQDAPLVHEETGSSEVNLFSRTRLIDSSQT-PTKQVKPLCQLHKILKFKLSPDSEIQS 128
BLAST of Vigst.10G132000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3UDE5|A0A1S3UDE5_VIGRR (Uncharacterized protein LOC106764293 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106764293 PE=4 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 1.064e-63 Identity = 105/131 (80.15%), Postives = 113/131 (86.26%), Query Frame = 0 Query: 23 MEANSNSASYEHQDQDEYVLLDLESVYNLINLPANAKYVLSDLDTLNPILIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHED----EETRFRR-RLIDSSQTPPTKQVKPFCQVHKILKFKLSPDSEIAT 148 MEANS ASYEH+DQDEYVLLDL+SV N IN PANAKYVL+ LDTLNP+LIIDDKFKLIGQYEESIGTCLAFTEQDAP+VHE+ E F R RLIDSSQT PTKQVKP CQ+HKILKFKLSPDSEI + Sbjct: 1 MEANS--ASYEHEDQDEYVLLDLDSVSNFINFPANAKYVLTGLDTLNPVLIIDDKFKLIGQYEESIGTCLAFTEQDAPLVHEETGSSEVNLFSRTRLIDSSQT-PTKQVKPLCQLHKILKFKLSPDSEIQS 128
BLAST of Vigst.10G132000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VMA5|A0A1S3VMA5_VIGRR (Uncharacterized protein LOC106776533 OS=Vigna radiata var. radiata OX=3916 GN=LOC106776533 PE=4 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 6.794e-63 Identity = 106/129 (82.17%), Postives = 113/129 (87.60%), Query Frame = 0 Query: 23 MEANSNSASYEHQDQDEYVLLDLESVYNLINLPANAKYVLSDLDTLNPILIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHED----EETRFRR-RLIDSSQTPPTKQVKPFCQVHKILKFKLSPDSEI 146 MEANS ASYEH+DQDEYVLLDL+SV NLINLPANAKYVL+ LDTLNP+LIIDDKFKLIGQYEESIGTCLAFTEQDAPV +E+ E F R RL DSSQT PTKQVKPFCQ+HKILKFKLSPDSEI Sbjct: 1 MEANS--ASYEHEDQDEYVLLDLDSVSNLINLPANAKYVLTGLDTLNPLLIIDDKFKLIGQYEESIGTCLAFTEQDAPVDNEETGSSEVNLFSRTRLSDSSQT-PTKQVKPFCQLHKILKFKLSPDSEI 126
BLAST of Vigst.10G132000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6NCN2|A0A4D6NCN2_VIGUN (Transcription factor TFIIIC OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g1138 PE=4 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 5.082e-61 Identity = 102/132 (77.27%), Postives = 112/132 (84.85%), Query Frame = 0 Query: 23 MEANSNSASYEHQDQDEYVLLDLESVYNLINLPANAKYVLSDLDTLNPILIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHED-----EETRFRR-RLIDSSQTPPTKQVKPFCQVHKILKFKLSPDSEIAT 148 MEANS ASYEH+DQDEYVLLDL+ V +LINLPANAKYVL+ LDTLNP LIIDDKFKLIG+YEESIGTCLAFTEQ+ PVVHE+ E F R RLIDS+Q PPTKQVKP CQ+HKILKFKLSPDSEI + Sbjct: 1 MEANS--ASYEHEDQDEYVLLDLDGVSDLINLPANAKYVLTGLDTLNPELIIDDKFKLIGEYEESIGTCLAFTEQETPVVHEETGSSSEMILFSRTRLIDSNQ-PPTKQVKPLCQLHKILKFKLSPDSEIQS 129
BLAST of Vigst.10G132000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SNK4|A0AA86SNK4_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS17376 PE=4 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 5.644e-61 Identity = 100/133 (75.19%), Postives = 112/133 (84.21%), Query Frame = 0 Query: 21 RNMEANSNSASYEHQDQDEYVLLDLESVYNLINLPANAKYVLSDLDTLNPILIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHED----EETRFR-RRLIDSSQTPPTKQVKPFCQVHKILKFKLSPDSEIAT 148 RNMEAN+ AS+E +DQDEYVLLDL+ V NLINLP NAKYVL+ LDTLNP+LIIDDKFKLIG+YEE+IGTCLAFTEQD PVVHE+ E F RLIDSSQ PPTKQVKP CQ+HK+LKFKLSPDSEI + Sbjct: 11 RNMEANA--ASHEQEDQDEYVLLDLDGVSNLINLPPNAKYVLTGLDTLNPVLIIDDKFKLIGEYEETIGTCLAFTEQDTPVVHEETGSSEVNLFSGTRLIDSSQ-PPTKQVKPLCQLHKVLKFKLSPDSEIQS 140
BLAST of Vigst.10G132000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86VEM8|A0AA86VEM8_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS17475 PE=4 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 1.532e-56 Identity = 97/133 (72.93%), Postives = 109/133 (81.95%), Query Frame = 0 Query: 21 RNMEANSNSASYEHQDQDEYVLLDLESVYNLINLPANAKYVLSDLDTLNPILIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHED----EETRFR-RRLIDSSQTPPTKQVKPFCQVHKILKFKLSPDSEIAT 148 RNMEAN+ AS+E +DQDEYVLLDL+ V NLINLP NA YVL+ LDTLNP+LIIDDKFKLIG+YEE+IGTCLAFTEQD VVHE+ E F RLIDSSQ PPTKQVK CQ+HK+LKFKLSPDSEI + Sbjct: 40 RNMEANA--ASHEQEDQDEYVLLDLDGVSNLINLPPNANYVLTGLDTLNPVLIIDDKFKLIGEYEETIGTCLAFTEQDTLVVHEETGSSEVNLFSGTRLIDSSQ-PPTKQVKLLCQLHKVLKFKLSPDSEIQS 169
BLAST of Vigst.10G132000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6N7P6|A0A2Z6N7P6_TRISU (Transcription factor TFIIIC triple barrel domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_53570 PE=4 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.783e-55 Identity = 90/134 (67.16%), Postives = 109/134 (81.34%), Query Frame = 0 Query: 23 MEANSNSASYEHQDQDEYVLLDLESVYNLINLPANAKYVLSDLDTLNPILIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHED----EETRFRR-RLIDSSQTPPTKQVKPFCQVHKILKFKLSPDSEIATSSQ 151 ME N+ +H+DQDEYVLLDL+ VY LI++PANA YVL+ LDTLNP+LIIDD+FKL+G+YEE+IGTC+AF+EQD PVVHE+ E RF +LIDSSQ P TKQVKP CQ+HKILKFKLSPDSEI T+ + Sbjct: 1 MEENAT----QHEDQDEYVLLDLDGVYGLIDIPANANYVLTGLDTLNPVLIIDDRFKLVGEYEETIGTCIAFSEQDTPVVHEETGPSETNRFSGTKLIDSSQ-PSTKQVKPVCQLHKILKFKLSPDSEIRTAEE 129
BLAST of Vigst.10G132000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:30347714-30348321 FORWARD LENGTH=102) HSP 1 Score: 98.9821 bits (245), Expect = 2.458e-27 Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = 0 Query: 37 QDEYVLLDLESVYNLINLPANAKYVLSDLDTLNPILIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHEDEETRFRRRLIDSSQTPPTKQVKPFCQVHKILKFKLSP 142 +DE+V++DL+ V I++PA+A Y LS LDTLNP+L ID K KL+G+Y +IGTCLAF+++ +QTP K V+P ++HKILKF+L+P Sbjct: 2 EDEHVMIDLDDVSRHIDIPADAPYTLSGLDTLNPVLTIDGKMKLVGEYIATIGTCLAFSDK------------------GDNQTPQKKTVEPVAKLHKILKFRLAP 89
BLAST of Vigst.10G132000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:5207704-5208289 REVERSE LENGTH=107) HSP 1 Score: 94.7449 bits (234), Expect = 1.435e-25 Identity = 46/105 (43.81%), Postives = 69/105 (65.71%), Query Frame = 0 Query: 37 QDEYVLLDLESVYNLINLPANAKYVLSDLDTLNPILIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHEDEETRFRRRLIDSSQTPPTKQVKPFCQVHKILKFKLS 141 ++E+V++DL+ V I +P++A Y LS LDTLNP+L ID K KL+G+Y E+IGTCLAF+E++ E+ Q P K ++P ++HKILKF+L+ Sbjct: 2 EEEFVMIDLDEVSRHIEIPSDAPYTLSGLDTLNPVLTIDGKIKLVGEYIETIGTCLAFSEKEEVSASEN-------------QMPHKKIIEPVAKLHKILKFRLA 93 The following BLAST results are available for this feature:
BLAST of Vigst.10G132000.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vigst.10G132000.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vigst.10G132000.01 vs. Araport11
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Vigna stipulacea acc. JP252948 genome v1.0
Date Performed: 2024-08-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >drVigStip.JP252948.2.0.Vigst.10G132000.01 ID=drVigStip.JP252948.2.0.Vigst.10G132000.01; Name=Vigst.10G132000.01; organism=Vigna stipulacea; type=mRNA; length=495bpback to top protein sequence of drVigStip.JP252948.2.0.Vigst.10G132000.01 >drVigStip.JP252948.2.0.Vigst.10G132000.01 ID=drVigStip.JP252948.2.0.Vigst.10G132000.01; Name=drVigStip.JP252948.2.0.Vigst.10G132000.01; organism=Vigna stipulacea; type=polypeptide; length=165bpback to top mRNA from alignment at Chr10:21598043..21600400- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>drVigStip.JP252948.2.0.Vigst.10G132000.01 ID=drVigStip.JP252948.2.0.Vigst.10G132000.01; Name=Vigst.10G132000.01; organism=Vigna stipulacea; type=mRNA; length=2358bp; location=Sequence derived from: Chr10:21598043..21600400- (Vigna stipulaceaback to top Coding sequence (CDS) from alignment at Chr10:21598043..21600400- >drVigStip.JP252948.2.0.Vigst.10G132000.01 ID=drVigStip.JP252948.2.0.Vigst.10G132000.01; Name=Vigst.10G132000.01; organism=Vigna stipulacea; type=CDS; length=495bp; location=Sequence derived from: Chr10:21598043..21600400- (Vigna stipulaceaback to top |