Vum_01G03348.1

Transcript Overview


Name	Vum_01G03348.1
Unique Name	drVigUmbe.FF25.1.0.Vum_01G03348.1
Type	mRNA
Organism	Vigna umbellata ()
Sequence length	870

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr1	chromosome	Chr1:56880180..56881049 +	Vigna umbellata FF25 genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna umbellata FF25 genome v1.0	2024-06-26
InterProScan Analysis for Vigna umbellata FF25 genome v1.0	2024-08-05
Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt TrEMBL	2024-08-05
Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt Swissprot	2024-08-05

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
anvumL0000	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvumL0001	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjvumL133	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anvumL0229	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjvumL172	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anvumL0354	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvumL0392	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjvumL452	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anvumL0791	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjvumL524	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anvumL0964	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ccavumL086	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
carvumL004	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
ccavumL138	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccavumL150	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccvumL0217	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccavumL319	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccvumL0477	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccvumL0485	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccavumL329	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccvumL0501	Cajanus cajan Asha genome v1.0	Cajanus cajan
pvvumL090	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
carvumL271	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
psvumL301	Pisum sativum Cameor genome v1a	Pisum sativum
psvumL317	Pisum sativum Cameor genome v1a	Pisum sativum
vrvvumL009	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
psvumL320	Pisum sativum Cameor genome v1a	Pisum sativum
carvumL403	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
vfhvumL230	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vfhvumL238	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
psvumL412	Pisum sativum Cameor genome v1a	Pisum sativum
pvvumL346	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
carvumL525	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
vumvumR011	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vumvumR065	Vigna umbellata FF25 genome v1.0	Vigna umbellata
pvvumL517	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
carvumL644	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
vumvumR104	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vfhvumL525	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vssvumL198	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vrvvumL350	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vrvvumL354	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
psvumL736	Pisum sativum Cameor genome v1a	Pisum sativum
vuvumL066	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vssvumL327	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vssvumL337	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vrvvumL507	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
pvvumL845	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
vuvumL240	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vuvumL414	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vssvumL695	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vuvumL707	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vumvvaR023	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vumvvaR040	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vumvvaR053	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vumvvaR059	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vumvvaR067	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vumvvaR104	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vstvumL000	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vstvumL207	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vstvumL639	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vasvumL004	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvumL200	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvumL497	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvumL610	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis

Orthologs


Gene/Transcript	Assembly	Species
Vigun03g357300.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Vigst.01G308300.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
Vigan.09G224100.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
Cc_v2.0_27348.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
rna-XM_014661165.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Va01G086690.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
rna-KK1_001938	Cajanus cajan Asha genome v1.0	Cajanus cajan
XM_058904235.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
Vfaba.Hedin2.R1.4g177320.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Vigan.01G432400.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
evm.Ca_v2.0_17855	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
rna-XM_014653354.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
jg19497.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Phvul.003G166200.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Vigst.09G136900.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
Phvul.010G155700.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Psat4g037360.1	Pisum sativum Cameor genome v1a	Pisum sativum
Cc_v2.0_25318.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
Vfaba.Hedin2.R1.2g266520.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
XM_058872922.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
rna-TanjilR_13334	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Psat7g256600.2	Pisum sativum Cameor genome v1a	Pisum sativum
rna-KK1_000215	Cajanus cajan Asha genome v1.0	Cajanus cajan
Va11G001230.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
rna-TanjilR_07009	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
jg57417.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Vum_09G01505.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vum_01G03348	drVigUmbe.FF25.1.0.Vum_01G03348	Vigna umbellata	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drVigUmbe.FF25.1.0.cds.Vum_01G03348.1	drVigUmbe.FF25.1.0.cds.Vum_01G03348.1	Vigna umbellata	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drVigUmbe.FF25.1.0.Vum_01G03348.1.exon1	drVigUmbe.FF25.1.0.Vum_01G03348.1.exon1	Vigna umbellata	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drVigUmbe.FF25.1.0.Vum_01G03348.1	drVigUmbe.FF25.1.0.Vum_01G03348.1	Vigna umbellata	polypeptide
drVigUmbe.FF25.1.0.Vum_01G03348.1	drVigUmbe.FF25.1.0.Vum_01G03348.1-protein	Vigna umbellata	polypeptide

Homology

[Close]

BLAST of Vum_01G03348.1 vs. Araport11
Match: | (Symbols: ATMBD11, MBD11 | methyl-CPG-binding domain 11 | chr3:5343209-5344386 FORWARD LENGTH=254)

HSP 1 Score: 139.428 bits (350), Expect = 1.386e-39
Identity = 64/90 (71.11%), Postives = 73/90 (81.11%), Query Frame = 0

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGK-KSPALKKEA 89
            F+P K G+ KK E+VF APTGEEI NRKQLEQYLK+HPG PA++EFDW T  TPRRSARISEK K TP P+ EPPKKRG+ KSP  KK+A
Sbjct:   22 FYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDA 111

[Close]

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGK-KSPALKKEA 89
            F+P K G+ KK E+VF APTGEEI NRKQLEQYLK+HPG PA++EFDW T  TPRRSARISEK K TP P+ EPPKKRG+ KSP  KK+A
Sbjct:   22 FYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDA 111

[Close]

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGK-KSPALKKEA 89
            F+P K G+ KK E+VF APTGEEI NRKQLEQYLK+HPG PA++EFDW T  TPRRSARISEK K TP P+ EPPKKRG+ KSP  KK+A
Sbjct:   22 FYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDA 111

[Close]

BLAST of Vum_01G03348.1 vs. Araport11
Match: | (Symbols: MBD10 | methyl-CPG-binding domain 10 | chr1:5275895-5277474 REVERSE LENGTH=384)

HSP 1 Score: 132.494 bits (332), Expect = 8.594e-36
Identity = 58/83 (69.88%), Postives = 69/83 (83.13%), Query Frame = 0

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVK-TTPPPEYEPPKKRGKKS 82
            F+PK+ GTP+K EIVF APTGEEI +RKQLEQYLKAHPG P +SEF+W TGETPRRS+RIS+KVK TTP P+ EP  K+ + S
Sbjct:   22 FYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVISEFEWTTGETPRRSSRISQKVKATTPTPDKEPLLKKRRSS 104

[Close]

BLAST of Vum_01G03348.1 vs. Araport11
Match: | (Symbols: MBD10 | methyl-CPG-binding domain 10 | chr1:5275895-5277474 REVERSE LENGTH=332)

HSP 1 Score: 68.5514 bits (166), Expect = 6.704e-13
Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 0

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLK 35
            F+PK+ GTP+K EIVF APTGEEI +RKQLEQYLK
Sbjct:   22 FYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLK 56

[Close]

BLAST of Vum_01G03348.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9TRI0|A0A0L9TRI0_PHAAN (MBD domain-containing protein (Fragment) OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g257800 PE=4 SV=1)

HSP 1 Score: 560.836 bits (1444), Expect = 0.000e+0
Identity = 287/289 (99.31%), Postives = 288/289 (99.65%), Query Frame = 0

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEKKAENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS 289
            FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHP GPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEK+AENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS
Sbjct:    2 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPDGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEKRAENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS 290

[Close]

BLAST of Vum_01G03348.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3R6W8|A0A0S3R6W8_PHAAN (MBD domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G432400 PE=4 SV=1)

HSP 1 Score: 559.681 bits (1441), Expect = 0.000e+0
Identity = 287/289 (99.31%), Postives = 288/289 (99.65%), Query Frame = 0

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEKKAENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS 289
            FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHP GPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEK+AENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS
Sbjct:   41 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPDGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEKRAENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS 329

[Close]

BLAST of Vum_01G03348.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0L7M7|A0A8T0L7M7_PHAAN (Methyl-CpG-binding domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0027710 PE=4 SV=1)

HSP 1 Score: 559.681 bits (1441), Expect = 0.000e+0
Identity = 287/289 (99.31%), Postives = 288/289 (99.65%), Query Frame = 0

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEKKAENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS 289
            FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHP GPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEK+AENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS
Sbjct:   41 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPDGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEKRAENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS 329

[Close]

BLAST of Vum_01G03348.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3US51|A0A1S3US51_VIGRR (Methyl-CpG-binding domain-containing protein 11 OS=Vigna radiata var. radiata OX=3916 GN=LOC106768294 PE=4 SV=1)

HSP 1 Score: 548.51 bits (1412), Expect = 0.000e+0
Identity = 279/289 (96.54%), Postives = 285/289 (98.62%), Query Frame = 0

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEKKAENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS 289
            FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEK KTTPPPEYEPPKKRGKKSPALKKEASQEDEKD TKEVQMEEADETKDHKDLEQEKNVVEENQDEK+AEN+DGKESTHPGENTDKPKDDENFKIA+AEVHASKEKL+DKVVEGSEVVQSKDEEKIEQPLEETKKDDGTD+KKVELEGENKEEHN+GTQVSQVKDEE VGQ LEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS
Sbjct:   45 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKAKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDGTKEVQMEEADETKDHKDLEQEKNVVEENQDEKRAENSDGKESTHPGENTDKPKDDENFKIAEAEVHASKEKLDDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDDKKVELEGENKEEHNQGTQVSQVKDEENVGQSLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS 333

[Close]

BLAST of Vum_01G03348.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KVI1|A0A4D6KVI1_VIGUN (MBD domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g965 PE=4 SV=1)

HSP 1 Score: 510.76 bits (1314), Expect = 1.289e-180
Identity = 278/289 (96.19%), Postives = 282/289 (97.58%), Query Frame = 0

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEKKAENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS 289
            FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEK KTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEK+ E+TDG ESTH GENTDKPKDDENFKIA+AEVH SKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEH+KGTQVSQV DEEKVGQPLEESKKDD TNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS
Sbjct:   54 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKAKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEKRVEDTDGNESTHHGENTDKPKDDENFKIAEAEVHTSKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEHSKGTQVSQVNDEEKVGQPLEESKKDDGTNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS 342

[Close]

BLAST of Vum_01G03348.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7CA01|V7CA01_PHAVU (MBD domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G166200g PE=4 SV=1)

HSP 1 Score: 489.574 bits (1259), Expect = 3.182e-172
Identity = 266/289 (92.04%), Postives = 278/289 (96.19%), Query Frame = 0

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEKKAENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS 289
            FFPKKYGTPKKNEI FTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEK KTTPPPEYEPPKKRGKKSPALKKEASQE+EKDETK+VQMEEADETKD KDLEQEKNVVEENQDEK+AE+TDGKESTHP E+TDKPKDDENFK ADAE+HASKEKLEDK+VEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEE +KGTQVSQV DEEKVG+PLEE+K+DD TNE KVELE  NKVEHNKGTQVN+EAHFKVHDINKKAESELTENGS
Sbjct:   53 FFPKKYGTPKKNEIAFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKAKTTPPPEYEPPKKRGKKSPALKKEASQEEEKDETKDVQMEEADETKDEKDLEQEKNVVEENQDEKRAEDTDGKESTHPEESTDKPKDDENFKTADAELHASKEKLEDKLVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEERSKGTQVSQVNDEEKVGEPLEETKRDDGTNENKVELERVNKVEHNKGTQVNEEAHFKVHDINKKAESELTENGS 341

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BLAST of Vum_01G03348.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86S730|A0AA86S730_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS11980 PE=4 SV=1)

HSP 1 Score: 454.907 bits (1169), Expect = 9.020e-159
Identity = 253/290 (87.24%), Postives = 268/290 (92.41%), Query Frame = 0

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEKKAENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELE-GENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS 289
            FFPKK GTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEK KTTPPPEYEPPKKRGKKSPA +KEASQ++ K+ETKEVQMEEA ETKD KDLEQEKNVVEENQD K+AE+TDGKESTHPGENTDKPKD ENFK ADAE+HAS EKLED VVEGSE VQ+KDEEKIE  L+ETKKDDGTDEKKVELE GENK EH+K +QVSQV DEEK+GQPLE +KKDD TNEKKVEL+GEN VEHNKGTQVN+E HFKVHDINKKAESELTENGS
Sbjct:   41 FFPKKSGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKAKTTPPPEYEPPKKRGKKSPASRKEASQDEGKEETKEVQMEEAGETKDDKDLEQEKNVVEENQDVKRAEDTDGKESTHPGENTDKPKDVENFKSADAELHASTEKLEDNVVEGSEAVQNKDEEKIEHQLDETKKDDGTDEKKVELEGGENKGEHDKVSQVSQVNDEEKIGQPLEGTKKDDGTNEKKVELDGENMVEHNKGTQVNEEGHFKVHDINKKAESELTENGS 330

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BLAST of Vum_01G03348.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151SLI3|A0A151SLI3_CAJCA (MBD domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_001938 PE=4 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 1.462e-117
Identity = 205/289 (70.93%), Postives = 221/289 (76.47%), Query Frame = 0

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEKKAENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS 289
            FFPKK GTPKKNEIVFTAPTGEEI +RKQLEQYLKAHPGGPA SEFDWGTGETPRRSARISEK K  PP E EPPKKRGKKSPA K++ASQE++K+ETKE QMEEA ETKD K L+ EKNVVEENQ EK+AE+TDGKESTH GEN + PKD+E FK  D E+HASKE+L+DK VEGSEVVQ+KD EKI Q LEETKKDDGTDEKKVELEGENKEEHN+GTQVSQV                                        NDE HFKVHDINKKAE ELTENGS
Sbjct:    1 FFPKKSGTPKKNEIVFTAPTGEEISSRKQLEQYLKAHPGGPAASEFDWGTGETPRRSARISEKAKAAPPQENEPPKKRGKKSPASKRDASQEEQKEETKEEQMEEAGETKDDKGLDPEKNVVEENQ-EKRAEDTDGKESTHHGENANIPKDEEEFKTNDGELHASKEQLDDKGVEGSEVVQNKDVEKIGQSLEETKKDDGTDEKKVELEGENKEEHNRGTQVSQV----------------------------------------NDEEHFKVHDINKKAEPELTENGS 248

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BLAST of Vum_01G03348.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371FNZ7|A0A371FNZ7_MUCPR (Methyl-CpG-binding domain-containing protein 11 (Fragment) OS=Mucuna pruriens OX=157652 GN=MBD11 PE=4 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 3.724e-117
Identity = 211/292 (72.26%), Postives = 226/292 (77.40%), Query Frame = 0

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPA---LKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEKKAENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGTDEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS 289
            FFPKK GTPKKNEIVFTAPTGEEIHNRKQLEQYLK+HP GPAVSEFDWGTGETPRRSARISEK K  PPPE EPPKKRGK+SPA      +  +E EK+ETKEVQMEEA+ETKD KDLE EKNVVEENQDEK+AE+TDGKESTHP ENTD PKD+ENFK AD E+HAS+EKL++K V G EVVQ+KDEEKI QPLEETKKDDGTDEKKVELEGENKEEHN+GTQVSQV                                        NDE HFKVHDINKKAESELTENGS
Sbjct:   41 FFPKKSGTPKKNEIVFTAPTGEEIHNRKQLEQYLKSHPDGPAVSEFDWGTGETPRRSARISEKAKAAPPPENEPPKKRGKRSPASKKEAPQEEEEKEKEETKEVQMEEANETKDDKDLEHEKNVVEENQDEKRAEDTDGKESTHPEENTDIPKDEENFKTADGELHASEEKLDNKGVVGPEVVQNKDEEKIGQPLEETKKDDGTDEKKVELEGENKEEHNRGTQVSQV----------------------------------------NDEEHFKVHDINKKAESELTENGS 292

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BLAST of Vum_01G03348.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8MKK2|A0A8B8MKK2_ABRPR (Methyl-CpG-binding domain-containing protein 11-like OS=Abrus precatorius OX=3816 GN=LOC113874954 PE=4 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 4.262e-110
Identity = 201/300 (67.00%), Postives = 226/300 (75.33%), Query Frame = 0

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKEVQMEEADETKDHKDLEQEKNVVEENQDEKKAENTDGKESTHPGENTDKPKDDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDGT-----------DEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVELEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS 289
            FFPKK GTPKKNEIVFTAPTGEEI+NRKQLEQYLK++PGGPA+SEFDWGTGETPRRSARISEK K  PPPE EPPKKRGKKS A KK+ SQE EK+ETKEVQM++ADETKD KDL QEKNVV+ENQDEK+ E+TD KES  PGENT+   D+E FK AD E+HAS EK +DK +EGSEVVQ+K EEKI QPLEETKKD G+            EKKVE+EGENKEEHN+G           +G                 E EGE K    +GT+VNDE H+KVHDINKKAES+LTENGS
Sbjct:   37 FFPKKSGTPKKNEIVFTAPTGEEINNRKQLEQYLKSNPGGPAISEFDWGTGETPRRSARISEKAKAAPPPESEPPKKRGKKSSASKKDTSQE-EKEETKEVQMQDADETKDDKDLVQEKNVVKENQDEKRVEDTDVKESPQPGENTNISNDEEKFKTADGELHASVEKFDDKRIEGSEVVQNKYEEKIGQPLEETKKDGGSAEAEKSETAPAAEKKVEVEGENKEEHNRG-----------IG-----------------ESEGETK--EKEGTKVNDEEHYKVHDINKKAESDLTENGS 305

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BLAST of Vum_01G03348.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LW00|MBD11_ARATH (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=MBD11 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.336e-38
Identity = 64/90 (71.11%), Postives = 73/90 (81.11%), Query Frame = 0

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVKTTPPPEYEPPKKRGK-KSPALKKEA 89
            F+P K G+ KK E+VF APTGEEI NRKQLEQYLK+HPG PA++EFDW T  TPRRSARISEK K TP P+ EPPKKRG+ KSP  KK+A
Sbjct:   22 FYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDA 111

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BLAST of Vum_01G03348.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9XI36|MBD10_ARATH (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=MBD10 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 8.355e-35
Identity = 58/83 (69.88%), Postives = 69/83 (83.13%), Query Frame = 0

Query:    1 FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGTGETPRRSARISEKVK-TTPPPEYEPPKKRGKKS 82
            F+PK+ GTP+K EIVF APTGEEI +RKQLEQYLKAHPG P +SEF+W TGETPRRS+RIS+KVK TTP P+ EP  K+ + S
Sbjct:   22 FYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVISEFEWTTGETPRRSSRISQKVKATTPTPDKEPLLKKRRSS 104

The following BLAST results are available for this feature:

BLAST of Vum_01G03348.1 vs. Araport11
BLAST of Vum_01G03348.1 vs. ExPASy TrEMBL (2024)
BLAST of Vum_01G03348.1 vs. ExPASy Swiss-Prot (2024)

BLAST of Vum_01G03348.1 vs. Araport11
Analysis Date: 2024-06-26 (Vigna umbellata FF25 genome v1.0)
Total hits: 5


Match Name	E-value	Identity	Description
\|	1.386e-39	71.11	Symbols: ATMBD11, MBD11 \| methyl-CPG-binding domai...	[more]
\|	1.386e-39	71.11	Symbols: ATMBD11, MBD11 \| methyl-CPG-binding domai...	[more]
\|	1.386e-39	71.11	Symbols: ATMBD11, MBD11 \| methyl-CPG-binding domai...	[more]
\|	8.594e-36	69.88	Symbols: MBD10 \| methyl-CPG-binding domain 10 \| ch...	[more]
\|	6.704e-13	77.14	Symbols: MBD10 \| methyl-CPG-binding domain 10 \| ch...	[more]

BLAST of Vum_01G03348.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-05 (Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A0L9TRI0\|A0A0L9TRI0_PHAAN	0.000e+0	99.31	MBD domain-containing protein (Fragment) OS=Phaseo...	[more]
tr\|A0A0S3R6W8\|A0A0S3R6W8_PHAAN	0.000e+0	99.31	MBD domain-containing protein OS=Vigna angularis v...	[more]
tr\|A0A8T0L7M7\|A0A8T0L7M7_PHAAN	0.000e+0	99.31	Methyl-CpG-binding domain-containing protein OS=Ph...	[more]
tr\|A0A1S3US51\|A0A1S3US51_VIGRR	0.000e+0	96.54	Methyl-CpG-binding domain-containing protein 11 OS...	[more]
tr\|A0A4D6KVI1\|A0A4D6KVI1_VIGUN	1.289e-180	96.19	MBD domain-containing protein OS=Vigna unguiculata...	[more]
tr\|V7CA01\|V7CA01_PHAVU	3.182e-172	92.04	MBD domain-containing protein OS=Phaseolus vulgari...	[more]
tr\|A0AA86S730\|A0AA86S730_9FABA	9.020e-159	87.24	Uncharacterized protein OS=Sphenostylis stenocarpa...	[more]
tr\|A0A151SLI3\|A0A151SLI3_CAJCA	1.462e-117	70.93	MBD domain-containing protein OS=Cajanus cajan OX=...	[more]
tr\|A0A371FNZ7\|A0A371FNZ7_MUCPR	3.724e-117	72.26	Methyl-CpG-binding domain-containing protein 11 (F...	[more]
tr\|A0A8B8MKK2\|A0A8B8MKK2_ABRPR	4.262e-110	67.00	Methyl-CpG-binding domain-containing protein 11-li...	[more]

BLAST of Vum_01G03348.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-05 (Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt Swissprot )
Total hits: 2


Match Name	E-value	Identity	Description
sp\|Q9LW00\|MBD11_ARATH	1.336e-38	71.11	Methyl-CpG-binding domain-containing protein 11 OS...	[more]
sp\|Q9XI36\|MBD10_ARATH	8.355e-35	69.88	Methyl-CpG-binding domain-containing protein 10 OS...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna umbellata FF25 genome v1.0
Date Performed: 2024-08-05


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 3..55 e-value: 5.9E-5 score: 33.9
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 1..53 score: 9.725838
IPR039622	Methyl-CpG-binding domain-containing protein 10/11	PANTHER	PTHR33729	METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 1..287
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 2..76

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr1:56880180..56881049+
coding sequence from alignment at Chr1:56880180..56881049+

mRNA sequence

>drVigUmbe.FF25.1.0.Vum_01G03348.1 ID=drVigUmbe.FF25.1.0.Vum_01G03348.1; Name=Vum_01G03348.1; organism=Vigna umbellata; type=mRNA; length=870bp
TTCTTTCCGAAAAAGTATGGAACCCCAAAGAAAAATGAGATTGTATTCAC
TGCACCAACTGGAGAGGAGATCCACAATCGGAAGCAACTGGAGCAGTATT
TGAAAGCACACCCTGGTGGCCCAGCTGTATCTGAATTTGATTGGGGGACT
GGTGAGACCCCAAGAAGATCAGCAAGAATCAGTGAGAAGGTGAAGACTAC
TCCTCCTCCAGAATATGAGCCCCCAAAGAAACGTGGCAAGAAATCGCCAG
CTTTGAAAAAAGAAGCTTCTCAGGAAGATGAAAAAGATGAAACAAAAGAA
GTGCAAATGGAAGAAGCTGATGAAACTAAGGATCATAAAGATTTAGAGCA
GGAAAAAAATGTTGTGGAGGAAAACCAAGATGAGAAGAAAGCAGAAAATA
CAGATGGCAAGGAATCCACTCATCCTGGAGAAAATACTGATAAACCTAAG
GATGATGAAAATTTCAAGATTGCTGATGCAGAGGTACATGCCTCAAAAGA
GAAACTCGAGGACAAAGTAGTTGAGGGCTCTGAAGTTGTTCAGAGTAAAG
ATGAAGAAAAGATTGAACAGCCACTGGAGGAGACAAAGAAAGATGATGGA
ACTGATGAGAAAAAGGTTGAACTGGAAGGAGAGAATAAGGAGGAACATAA
TAAAGGTACTCAAGTATCTCAAGTGAAGGATGAAGAAAAGGTTGGACAGC
CGCTCGAGGAGTCAAAGAAAGATGATGAAACTAATGAGAAGAAGGTTGAA
CTGGAAGGAGAGAATAAGGTGGAACATAACAAAGGCACTCAGGTGAATGA
TGAAGCACATTTTAAGGTTCACGATATAAATAAGAAGGCTGAATCAGAGC
TGACTGAGAATGGAAGCTGA

protein sequence of drVigUmbe.FF25.1.0.Vum_01G03348.1

>drVigUmbe.FF25.1.0.Vum_01G03348.1 ID=drVigUmbe.FF25.1.0.Vum_01G03348.1; Name=drVigUmbe.FF25.1.0.Vum_01G03348.1; organism=Vigna umbellata; type=polypeptide; length=289bp
FFPKKYGTPKKNEIVFTAPTGEEIHNRKQLEQYLKAHPGGPAVSEFDWGT
GETPRRSARISEKVKTTPPPEYEPPKKRGKKSPALKKEASQEDEKDETKE
VQMEEADETKDHKDLEQEKNVVEENQDEKKAENTDGKESTHPGENTDKPK
DDENFKIADAEVHASKEKLEDKVVEGSEVVQSKDEEKIEQPLEETKKDDG
TDEKKVELEGENKEEHNKGTQVSQVKDEEKVGQPLEESKKDDETNEKKVE
LEGENKVEHNKGTQVNDEAHFKVHDINKKAESELTENGS

mRNA from alignment at Chr1:56880180..56881049+

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>drVigUmbe.FF25.1.0.Vum_01G03348.1 ID=drVigUmbe.FF25.1.0.Vum_01G03348.1; Name=Vum_01G03348.1; organism=Vigna umbellata; type=mRNA; length=870bp; location=Sequence derived from: Chr1:56880180..56881049+ (Vigna umbellata
TTCTTTCCGAAAAAGTATGGAACCCCAAAGAAAAATGAGATTGTATTCAC
TGCACCAACTGGAGAGGAGATCCACAATCGGAAGCAACTGGAGCAGTATT
TGAAAGCACACCCTGGTGGCCCAGCTGTATCTGAATTTGATTGGGGGACT
GGTGAGACCCCAAGAAGATCAGCAAGAATCAGTGAGAAGGTGAAGACTAC
TCCTCCTCCAGAATATGAGCCCCCAAAGAAACGTGGCAAGAAATCGCCAG
CTTTGAAAAAAGAAGCTTCTCAGGAAGATGAAAAAGATGAAACAAAAGAA
GTGCAAATGGAAGAAGCTGATGAAACTAAGGATCATAAAGATTTAGAGCA
GGAAAAAAATGTTGTGGAGGAAAACCAAGATGAGAAGAAAGCAGAAAATA
CAGATGGCAAGGAATCCACTCATCCTGGAGAAAATACTGATAAACCTAAG
GATGATGAAAATTTCAAGATTGCTGATGCAGAGGTACATGCCTCAAAAGA
GAAACTCGAGGACAAAGTAGTTGAGGGCTCTGAAGTTGTTCAGAGTAAAG
ATGAAGAAAAGATTGAACAGCCACTGGAGGAGACAAAGAAAGATGATGGA
ACTGATGAGAAAAAGGTTGAACTGGAAGGAGAGAATAAGGAGGAACATAA
TAAAGGTACTCAAGTATCTCAAGTGAAGGATGAAGAAAAGGTTGGACAGC
CGCTCGAGGAGTCAAAGAAAGATGATGAAACTAATGAGAAGAAGGTTGAA
CTGGAAGGAGAGAATAAGGTGGAACATAACAAAGGCACTCAGGTGAATGA
TGAAGCACATTTTAAGGTTCACGATATAAATAAGAAGGCTGAATCAGAGC
TGACTGAGAATGGAAGCTGA

Coding sequence (CDS) from alignment at Chr1:56880180..56881049+

>drVigUmbe.FF25.1.0.Vum_01G03348.1 ID=drVigUmbe.FF25.1.0.Vum_01G03348.1; Name=Vum_01G03348.1; organism=Vigna umbellata; type=CDS; length=870bp; location=Sequence derived from: Chr1:56880180..56881049+ (Vigna umbellata
TTCTTTCCGAAAAAGTATGGAACCCCAAAGAAAAATGAGATTGTATTCAC
TGCACCAACTGGAGAGGAGATCCACAATCGGAAGCAACTGGAGCAGTATT
TGAAAGCACACCCTGGTGGCCCAGCTGTATCTGAATTTGATTGGGGGACT
GGTGAGACCCCAAGAAGATCAGCAAGAATCAGTGAGAAGGTGAAGACTAC
TCCTCCTCCAGAATATGAGCCCCCAAAGAAACGTGGCAAGAAATCGCCAG
CTTTGAAAAAAGAAGCTTCTCAGGAAGATGAAAAAGATGAAACAAAAGAA
GTGCAAATGGAAGAAGCTGATGAAACTAAGGATCATAAAGATTTAGAGCA
GGAAAAAAATGTTGTGGAGGAAAACCAAGATGAGAAGAAAGCAGAAAATA
CAGATGGCAAGGAATCCACTCATCCTGGAGAAAATACTGATAAACCTAAG
GATGATGAAAATTTCAAGATTGCTGATGCAGAGGTACATGCCTCAAAAGA
GAAACTCGAGGACAAAGTAGTTGAGGGCTCTGAAGTTGTTCAGAGTAAAG
ATGAAGAAAAGATTGAACAGCCACTGGAGGAGACAAAGAAAGATGATGGA
ACTGATGAGAAAAAGGTTGAACTGGAAGGAGAGAATAAGGAGGAACATAA
TAAAGGTACTCAAGTATCTCAAGTGAAGGATGAAGAAAAGGTTGGACAGC
CGCTCGAGGAGTCAAAGAAAGATGATGAAACTAATGAGAAGAAGGTTGAA
CTGGAAGGAGAGAATAAGGTGGAACATAACAAAGGCACTCAGGTGAATGA
TGAAGCACATTTTAAGGTTCACGATATAAATAAGAAGGCTGAATCAGAGC
TGACTGAGAATGGAAGCTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001739	Methyl_CpG_DNA-bd
IPR039622	MBD10/11
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

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