Vum_01G04103.1

Transcript Overview
NameVum_01G04103.1
Unique NamedrVigUmbe.FF25.1.0.Vum_01G04103.1
TypemRNA
OrganismVigna umbellata ()
Sequence length531
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr1chromosomeChr1:64836319..64837211 +Vigna umbellata FF25 genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna umbellata FF25 genome v1.02024-06-26
InterProScan Analysis for Vigna umbellata FF25 genome v1.0 2024-08-05
Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt TrEMBL2024-08-05
Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt Swissprot 2024-08-05
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvumL0008Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvumL082Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvumL090Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvumL0231Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvumL170Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvumL0444Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvumL0614Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvumL0885Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carvumL010Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavumL147Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccvumL0056Cajanus cajan Asha genome v1.0Cajanus cajan
ccvumL0129Cajanus cajan Asha genome v1.0Cajanus cajan
psvumL002Pisum sativum Cameor genome v1aPisum sativum
vfhvumL002Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
psvumL287Pisum sativum Cameor genome v1aPisum sativum
ccavumL500Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumL046Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvumL355Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vssvumL020Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavumL698Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vumvumR093Vigna umbellata FF25 genome v1.0Vigna umbellata
carvumL633Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
vfhvumL527Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvumL570Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvumL579Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavumL780Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vssvumL324Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvumL343Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvumL507Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vuvumL240Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvumL500Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vumvvaR002Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vumvvaR019Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vumvvaR071Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvumL000Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvumL418Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvumL422Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvumL001Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvumL409Vigna angularis cv. Shumari genome v1.a1Vigna angularis

Orthologs
Gene/TranscriptAssemblySpecies
Cc_v2.0_28152.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Phvul.003G085600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_026061Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun03g439500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigst.01G380100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va01G100060.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_13181Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vum_01G04103drVigUmbe.FF25.1.0.Vum_01G04103Vigna umbellatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.Vum_01G04103.1.exon1drVigUmbe.FF25.1.0.Vum_01G04103.1.exon1Vigna umbellataexon
drVigUmbe.FF25.1.0.Vum_01G04103.1.exon2drVigUmbe.FF25.1.0.Vum_01G04103.1.exon2Vigna umbellataexon
drVigUmbe.FF25.1.0.Vum_01G04103.1.exon3drVigUmbe.FF25.1.0.Vum_01G04103.1.exon3Vigna umbellataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.cds.Vum_01G04103.1drVigUmbe.FF25.1.0.cds.Vum_01G04103.1Vigna umbellataCDS
drVigUmbe.FF25.1.0.cds.Vum_01G04103.1drVigUmbe.FF25.1.0.cds.Vum_01G04103.1_2Vigna umbellataCDS
drVigUmbe.FF25.1.0.cds.Vum_01G04103.1drVigUmbe.FF25.1.0.cds.Vum_01G04103.1_3Vigna umbellataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.Vum_01G04103.1drVigUmbe.FF25.1.0.Vum_01G04103.1Vigna umbellatapolypeptide
drVigUmbe.FF25.1.0.Vum_01G04103.1drVigUmbe.FF25.1.0.Vum_01G04103.1-proteinVigna umbellatapolypeptide


Homology
[Close]
BLAST of Vum_01G04103.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:11787351-11788103 FORWARD LENGTH=179)

HSP 1 Score: 172.94 bits (437), Expect = 2.915e-55
Identity = 80/125 (64.00%), Postives = 100/125 (80.00%), Query Frame = 0 
Query:   51 NRTVITSRKLLQSADDG-GLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVC 174
            NRT + SRKLL S D G G N IG  CSK++IV++QG   PLP+G+PSYTV+I N C SDC+IA I + CGWFSS RL+NP+VFRR+ YDDCLVNDG+PL  G+++SFQY+N+F YPLSV+SV C
Sbjct:   55 NRTAL-SRKLLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178
[Close]
BLAST of Vum_01G04103.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:11787351-11788103 FORWARD LENGTH=179)

HSP 1 Score: 172.94 bits (437), Expect = 2.915e-55
Identity = 80/125 (64.00%), Postives = 100/125 (80.00%), Query Frame = 0 
Query:   51 NRTVITSRKLLQSADDG-GLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVC 174
            NRT + SRKLL S D G G N IG  CSK++IV++QG   PLP+G+PSYTV+I N C SDC+IA I + CGWFSS RL+NP+VFRR+ YDDCLVNDG+PL  G+++SFQY+N+F YPLSV+SV C
Sbjct:   55 NRTAL-SRKLLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178
[Close]
BLAST of Vum_01G04103.1 vs. Araport11
Match: | (Symbols: TPD1 | TAPETUM DETERMINANT 1 | chr4:12838220-12839619 FORWARD LENGTH=176)

HSP 1 Score: 135.191 bits (339), Expect = 2.291e-40
Identity = 64/128 (50.00%), Postives = 83/128 (64.84%), Query Frame = 0 
Query:   55 ITSRKLLQSADDGGLNH-------IGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCS 175
            I+ RK+L  +   G          IG  C   +IV+ Q    P+P GIP Y V+I N C S C I+ I ++CGWFSSA+LINP+VF+R+ YDDCLVN+GKPL  G T+SF Y+NTF Y LSV+ V C+
Sbjct:   49 ISHRKMLLLSPGTGKTERSVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTCA 176
[Close]
BLAST of Vum_01G04103.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:1762248-1762702 FORWARD LENGTH=127)

HSP 1 Score: 55.0694 bits (131), Expect = 4.786e-10
Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 0 
Query:   98 YTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYD--DCLVNDGKPLASGKTVSFQYSNTFRY---PLSVS 170
            + V++MN C   C I N+RL C  F  + L++P   R +     +C+VNDG PL+  +T+SF YSNT ++   PLS S
Sbjct:   48 FRVEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFALRPLSWS 123
[Close]
BLAST of Vum_01G04103.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3UHL0|A0A1S3UHL0_VIGRR (TPD1 protein homolog 1-like isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106765421 PE=4 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 4.384e-126
Identity = 174/176 (98.86%), Postives = 175/176 (99.43%), Query Frame = 0 
Query:    1 MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGESDAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCSS 176
            MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGE DAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIA+IRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCSS
Sbjct:   22 MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGERDAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIADIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCSS 197
[Close]
BLAST of Vum_01G04103.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0FBW8|A0A3Q0FBW8_VIGRR (TPD1 protein homolog 1-like isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106765421 PE=4 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 4.595e-126
Identity = 174/176 (98.86%), Postives = 175/176 (99.43%), Query Frame = 0 
Query:    1 MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGESDAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCSS 176
            MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGE DAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIA+IRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCSS
Sbjct:    1 MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGERDAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIADIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCSS 176
[Close]
BLAST of Vum_01G04103.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3R9Y9|A0A0S3R9Y9_PHAAN (TPD1 protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G540900 PE=4 SV=1)

HSP 1 Score: 360.147 bits (923), Expect = 1.035e-125
Identity = 173/175 (98.86%), Postives = 174/175 (99.43%), Query Frame = 0 
Query:    1 MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGESDAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCS 175
            MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGE DAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRR+GYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCS
Sbjct:    1 MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGERDAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRMGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCS 175
[Close]
BLAST of Vum_01G04103.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9TT38|A0A0L9TT38_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g326100 PE=4 SV=1)

HSP 1 Score: 360.147 bits (923), Expect = 1.035e-125
Identity = 173/175 (98.86%), Postives = 174/175 (99.43%), Query Frame = 0 
Query:    1 MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGESDAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCS 175
            MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGE DAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRR+GYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCS
Sbjct:    1 MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGERDAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRMGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCS 175
[Close]
BLAST of Vum_01G04103.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0L532|A0A8T0L532_PHAAN (TPD1 protein-like protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0018860 PE=4 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 1.106e-115
Identity = 172/223 (77.13%), Postives = 174/223 (78.03%), Query Frame = 0 
Query:    1 MKVGFKSAKARSFCTVSVASLFAMLL------------------------------------------------VRDVIIHREGESDAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCS 175
            MKVGFKSAKARSFCTVSVASLFAMLL                                                +RDVIIHREGE DAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRR+GYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCS
Sbjct:    1 MKVGFKSAKARSFCTVSVASLFAMLLGNTLTLMTHIIQSLCHCNCNTLLESIFKKSCSLIPSPVDLFNCSALIQLRDVIIHREGERDAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRMGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCS 223
[Close]
BLAST of Vum_01G04103.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7C7A4|V7C7A4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G085600g PE=4 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 4.582e-114
Identity = 158/175 (90.29%), Postives = 163/175 (93.14%), Query Frame = 0 
Query:    1 MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGESDAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCS 175
            MKVG K  KAR FC VSVASLF MLLVRDV+IHREGE D GIAEMFFSKGN TVITSRKLLQSADDGGLNHIG VCSK++IVIYQGEVPPLPTGIPSYTVQIMNMCASDCDI  IRLHCGWFSSARLINP+VFRRVGYDDCLVNDGKPLASGKT+SFQYSNTFRYPLSVSSVVCS
Sbjct:    1 MKVGLKITKARIFCMVSVASLFPMLLVRDVLIHREGERDTGIAEMFFSKGNPTVITSRKLLQSADDGGLNHIGMVCSKDDIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIEYIRLHCGWFSSARLINPRVFRRVGYDDCLVNDGKPLASGKTISFQYSNTFRYPLSVSSVVCS 175
[Close]
BLAST of Vum_01G04103.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86S4J8|A0AA86S4J8_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS10299 PE=4 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 3.784e-112
Identity = 151/176 (85.80%), Postives = 164/176 (93.18%), Query Frame = 0 
Query:    1 MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGESDAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCSS 176
            MKVG KS KARSFC VSVASLFAM LVRDV+IHREGE D GIAEMFFSKGNRT+ITSRKLLQS+D+G +NHIG  CSK++IV+YQGE+PPLP+GIPSYTVQIMNMCASDCDIANIRL CGWFSSARLINPKVFRRVGYDDCLVNDGK L SGKT+SFQY+NTFRYPLSVSSVVCS+
Sbjct:   23 MKVGLKSTKARSFCMVSVASLFAMFLVRDVVIHREGERDGGIAEMFFSKGNRTLITSRKLLQSSDEGDMNHIGMACSKDDIVVYQGELPPLPSGIPSYTVQIMNMCASDCDIANIRLRCGWFSSARLINPKVFRRVGYDDCLVNDGKALDSGKTISFQYANTFRYPLSVSSVVCST 198
[Close]
BLAST of Vum_01G04103.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KYM0|A0A4D6KYM0_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g129 PE=4 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 2.335e-111
Identity = 152/167 (91.02%), Postives = 161/167 (96.41%), Query Frame = 0 
Query:    1 MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGESDAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPL 167
            MKVG KSAKARSFC VSVASLFAMLLVR V+IHREGE DAG+A+MFFSKGN+TVITSRKLLQSAD+GGL+HIG VCSKE+IVIYQGEVPPLPTGIPSYTVQIMNMCA+DCDIANI LHCGWFSSARLINPKVFRR+GYDDCLVNDGKPLASGKTVSFQYSNTFRYPL
Sbjct:    1 MKVGLKSAKARSFCMVSVASLFAMLLVRGVLIHREGERDAGMAKMFFSKGNQTVITSRKLLQSADNGGLSHIGMVCSKEDIVIYQGEVPPLPTGIPSYTVQIMNMCATDCDIANISLHCGWFSSARLINPKVFRRMGYDDCLVNDGKPLASGKTVSFQYSNTFRYPL 167
[Close]
BLAST of Vum_01G04103.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371EAU3|A0A371EAU3_MUCPR (TPD1 protein-like 1 (Fragment) OS=Mucuna pruriens OX=157652 GN=TDL1 PE=4 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 3.741e-73
Identity = 103/131 (78.63%), Postives = 117/131 (89.31%), Query Frame = 0 
Query:   45 MFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCS 175
            MF S+GN+ VITSR LLQS DDG +NHIG  CSK+ IVIYQG+VPPLP+GIP+Y VQI+NMCASDC+IA IRLHCGWFSSARLINP+VFRRVGYDDCLVNDG  L  GKT+SF+Y+NT+RYPLSVSSVVCS
Sbjct:    1 MFSSRGNKRVITSRMLLQSGDDGNMNHIGKGCSKDNIVIYQGQVPPLPSGIPAYRVQIINMCASDCNIAKIRLHCGWFSSARLINPRVFRRVGYDDCLVNDGGVLGPGKTISFEYANTYRYPLSVSSVVCS 131
[Close]
BLAST of Vum_01G04103.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4P1RTY3|A0A4P1RTY3_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_13181 PE=4 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 8.927e-73
Identity = 114/183 (62.30%), Postives = 139/183 (75.96%), Query Frame = 0 
Query:    1 MKVGFKSAKARS----FCTVSVASLFAMLLVRDVIIHREGESDAGIAEMFFSKGNRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASD-----CDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVC 174
            MKV  K+ KAR+    F    VA + A+LLVRD  I++ GE DA I EM + KGNR V+T+RKLLQS+ DG    +G  CSKE+I IY+G+V PLP+GIPSYTV I+NMC +D     C+IA+IR+HCGWFSSARLINPKVFRR+GYDDCLVNDG+ LA G  +SFQY+NT+ YPLSVSSV C
Sbjct:    1 MKVVLKTLKARTIYILFLASFVAFVSALLLVRDSSIYKVGERDANIKEMLWYKGNRRVMTTRKLLQSSGDG----VGRGCSKEDIRIYEGQVDPLPSGIPSYTVDIVNMCGNDENNNDCNIADIRVHCGWFSSARLINPKVFRRIGYDDCLVNDGEALAPGTAISFQYANTYSYPLSVSSVQC 179
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BLAST of Vum_01G04103.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q1G3T1|TDL1_ARATH (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.795e-54
Identity = 80/125 (64.00%), Postives = 100/125 (80.00%), Query Frame = 0 
Query:   51 NRTVITSRKLLQSADDG-GLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVC 174
            NRT + SRKLL S D G G N IG  CSK++IV++QG   PLP+G+PSYTV+I N C SDC+IA I + CGWFSS RL+NP+VFRR+ YDDCLVNDG+PL  G+++SFQY+N+F YPLSV+SV C
Sbjct:   55 NRTAL-SRKLLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178
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BLAST of Vum_01G04103.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6TLJ2|TPD1_ARATH (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.202e-39
Identity = 64/128 (50.00%), Postives = 83/128 (64.84%), Query Frame = 0 
Query:   55 ITSRKLLQSADDGGLNH-------IGTVCSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVCS 175
            I+ RK+L  +   G          IG  C   +IV+ Q    P+P GIP Y V+I N C S C I+ I ++CGWFSSA+LINP+VF+R+ YDDCLVN+GKPL  G T+SF Y+NTF Y LSV+ V C+
Sbjct:   49 ISHRKMLLLSPGTGKTERSVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTCA 176
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BLAST of Vum_01G04103.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q2QR54|TDL1A_ORYSJ (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.556e-38
Identity = 57/102 (55.88%), Postives = 77/102 (75.49%), Query Frame = 0 
Query:   79 EEIVIYQGEVPPLPTGIPSYTVQIMNMCA------SDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVC 174
            ++I IYQG   PLP+G+P+YTV +MN CA       +C IA I + CGWFSS  L++P+VFRR+G+DDCL+NDG+PL +G+TVSF+Y+N+F Y LSVS   C
Sbjct:  118 DDIAIYQGRATPLPSGVPAYTVDVMNRCAGGGGGDEECAIAGIHVRCGWFSSVSLVDPRVFRRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVATC 219
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BLAST of Vum_01G04103.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8S6P9|TDL1B_ORYSJ (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.602e-31
Identity = 60/166 (36.14%), Postives = 98/166 (59.04%), Query Frame = 0 
Query:   17 SVASLFAMLLVRDVIIHREGESDAGIAEMFFSKGNRTVITSRKLLQSADD----GGLNHIGTV----CSKEEIVIYQGEVPPLPTGIPSYTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLASGKTVSFQYSNTFRYPLSVSSVVC 174
            S  ++  +LLV    +   GES +       S      +   KLL  ++D    GG + +  +    CS++ +V+YQ     LP+GIP+Y+V+I+N+C + C + ++ + CG F+SA L++P  F+R+G++DCLV  G  L   + VSFQYSN+F YPL+V++V C
Sbjct:   11 SSVTIILLLLVASQALVVSGESSS-------SAMQSKTLNMNKLLNISEDHSPNGGRHWMQRMQPDSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVCTA-CTVYDVHISCGEFASAELVDPSQFQRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLAVANVAC 168
[Close]
BLAST of Vum_01G04103.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|A8MS78|Y1583_ARATH (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 4.641e-9
Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 0 
Query:   98 YTVQIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYD--DCLVNDGKPLASGKTVSFQYSNTFRY---PLSVS 170
            + V++MN C   C I N+RL C  F  + L++P   R +     +C+VNDG PL+  +T+SF YSNT ++   PLS S
Sbjct:   48 FRVEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFALRPLSWS 123
The following BLAST results are available for this feature:
BLAST of Vum_01G04103.1 vs. Araport11
Analysis Date: 2024-06-26 (Vigna umbellata FF25 genome v1.0)
Total hits: 4
Match NameE-valueIdentityDescription
|2.915e-5564.00Symbols: no symbol available | no full name availa... [more]
|2.915e-5564.00Symbols: no symbol available | no full name availa... [more]
|2.291e-4050.00Symbols: TPD1 | TAPETUM DETERMINANT 1 | chr4:12838... [more]
|4.786e-1041.03Symbols: no symbol available | no full name availa... [more]
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BLAST of Vum_01G04103.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-05 (Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3UHL0|A0A1S3UHL0_VIGRR4.384e-12698.86TPD1 protein homolog 1-like isoform X1 OS=Vigna ra... [more]
tr|A0A3Q0FBW8|A0A3Q0FBW8_VIGRR4.595e-12698.86TPD1 protein homolog 1-like isoform X2 OS=Vigna ra... [more]
tr|A0A0S3R9Y9|A0A0S3R9Y9_PHAAN1.035e-12598.86TPD1 protein OS=Vigna angularis var. angularis OX=... [more]
tr|A0A0L9TT38|A0A0L9TT38_PHAAN1.035e-12598.86Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A8T0L532|A0A8T0L532_PHAAN1.106e-11577.13TPD1 protein-like protein OS=Phaseolus angularis O... [more]
tr|V7C7A4|V7C7A4_PHAVU4.582e-11490.29Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0AA86S4J8|A0AA86S4J8_9FABA3.784e-11285.80Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A4D6KYM0|A0A4D6KYM0_VIGUN2.335e-11191.02Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|A0A371EAU3|A0A371EAU3_MUCPR3.741e-7378.63TPD1 protein-like 1 (Fragment) OS=Mucuna pruriens ... [more]
tr|A0A4P1RTY3|A0A4P1RTY3_LUPAN8.927e-7362.30Uncharacterized protein OS=Lupinus angustifolius O... [more]
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BLAST of Vum_01G04103.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-05 (Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt Swissprot )
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q1G3T1|TDL1_ARATH2.795e-5464.00TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=... [more]
sp|Q6TLJ2|TPD1_ARATH2.202e-3950.00Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thali... [more]
sp|Q2QR54|TDL1A_ORYSJ3.556e-3855.88TPD1 protein homolog 1A OS=Oryza sativa subsp. jap... [more]
sp|Q8S6P9|TDL1B_ORYSJ3.602e-3136.14TPD1 protein homolog 1B OS=Oryza sativa subsp. jap... [more]
sp|A8MS78|Y1583_ARATH4.641e-941.03Uncharacterized protein At1g05835 OS=Arabidopsis t... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna umbellata FF25 genome v1.0
Date Performed: 2024-08-05
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040361Tapetum determinant 1PANTHERPTHR33184PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATEDcoord: 62..174

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigUmbe.FF25.1.0.Vum_01G04103.1 ID=drVigUmbe.FF25.1.0.Vum_01G04103.1; Name=Vum_01G04103.1; organism=Vigna umbellata; type=mRNA; length=531bp
ATGAAAGTTGGGTTTAAAAGTGCCAAAGCTAGAAGCTTTTGCACGGTCTC
TGTTGCCTCGCTCTTTGCCATGCTTTTAGTAAGGGATGTGATAATTCACA
GGGAAGGTGAGAGTGACGCAGGCATTGCAGAGATGTTTTTCTCCAAAGGA
AACCGAACAGTAATCACCTCACGAAAACTGCTGCAATCTGCTGATGATGG
GGGCTTGAACCATATAGGAACGGTGTGCTCAAAGGAGGAGATAGTGATAT
ATCAGGGGGAAGTGCCCCCTCTTCCCACGGGGATTCCTTCGTACACAGTT
CAAATAATGAACATGTGCGCCAGTGATTGCGACATAGCAAACATACGCCT
CCACTGTGGGTGGTTCAGTTCAGCACGTTTGATAAACCCCAAAGTGTTTC
GCAGAGTGGGATACGATGATTGCCTAGTCAATGATGGAAAACCTCTTGCC
TCAGGAAAAACCGTCTCCTTTCAATATTCCAACACTTTTCGCTACCCTCT
CTCCGTTTCATCTGTTGTTTGCTCCTCATGA
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protein sequence of drVigUmbe.FF25.1.0.Vum_01G04103.1

>drVigUmbe.FF25.1.0.Vum_01G04103.1 ID=drVigUmbe.FF25.1.0.Vum_01G04103.1; Name=drVigUmbe.FF25.1.0.Vum_01G04103.1; organism=Vigna umbellata; type=polypeptide; length=176bp
MKVGFKSAKARSFCTVSVASLFAMLLVRDVIIHREGESDAGIAEMFFSKG
NRTVITSRKLLQSADDGGLNHIGTVCSKEEIVIYQGEVPPLPTGIPSYTV
QIMNMCASDCDIANIRLHCGWFSSARLINPKVFRRVGYDDCLVNDGKPLA
SGKTVSFQYSNTFRYPLSVSSVVCSS
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mRNA from alignment at Chr1:64836319..64837211+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigUmbe.FF25.1.0.Vum_01G04103.1 ID=drVigUmbe.FF25.1.0.Vum_01G04103.1; Name=Vum_01G04103.1; organism=Vigna umbellata; type=mRNA; length=893bp; location=Sequence derived from: Chr1:64836319..64837211+ (Vigna umbellata
ATGAAAGTTGGGTTTAAAAGTGCCAAAGCTAGAAGCTTTTGCACGGTCTC
TGTTGCCTCGCTCTTTGCCATGCTTTTAGGTAACACCTTGACCTTAATGA
CACATATTATACAGTCTTTGTGCCATTGCAACTGCAATAACCTCCTCGAG
TCGATGTTCAAGAAAAGCTGTAGTCTGAGTCACTCACCCATTGACTTGTT
TAATGGTTTGGCTTTGATACAATGTACTAATTGCTAAGCTTCTAGATTGA
TTGGAGTAGTTGTTTCATGTAAGATTAACTCCTTCTGTTTCACACCAATC
CCTTGTAAAAAAAATTGAATTTTCATATATGGTGAGTTGAGCAACTGACA
TTCTTATTTGCACTGCAGTAAGGGATGTGATAATTCACAGGGAAGGTGAG
AGTGACGCAGGCATTGCAGAGATGTTTTTCTCCAAAGGAAACCGAACAGT
AATCACCTCACGAAAACTGCTGCAATCTGCTGGTACGAGAACCCTTTACA
AGCATGTTGTAGTAATAAAATAGAATTGCAGCACTAAAATTATGGTGCAT
TGCAGATGATGGGGGCTTGAACCATATAGGAACGGTGTGCTCAAAGGAGG
AGATAGTGATATATCAGGGGGAAGTGCCCCCTCTTCCCACGGGGATTCCT
TCGTACACAGTTCAAATAATGAACATGTGCGCCAGTGATTGCGACATAGC
AAACATACGCCTCCACTGTGGGTGGTTCAGTTCAGCACGTTTGATAAACC
CCAAAGTGTTTCGCAGAGTGGGATACGATGATTGCCTAGTCAATGATGGA
AAACCTCTTGCCTCAGGAAAAACCGTCTCCTTTCAATATTCCAACACTTT
TCGCTACCCTCTCTCCGTTTCATCTGTTGTTTGCTCCTCATGA
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Coding sequence (CDS) from alignment at Chr1:64836319..64837211+

>drVigUmbe.FF25.1.0.Vum_01G04103.1 ID=drVigUmbe.FF25.1.0.Vum_01G04103.1; Name=Vum_01G04103.1; organism=Vigna umbellata; type=CDS; length=531bp; location=Sequence derived from: Chr1:64836319..64837211+ (Vigna umbellata
ATGAAAGTTGGGTTTAAAAGTGCCAAAGCTAGAAGCTTTTGCACGGTCTC
TGTTGCCTCGCTCTTTGCCATGCTTTTAGTAAGGGATGTGATAATTCACA
GGGAAGGTGAGAGTGACGCAGGCATTGCAGAGATGTTTTTCTCCAAAGGA
AACCGAACAGTAATCACCTCACGAAAACTGCTGCAATCTGCTGATGATGG
GGGCTTGAACCATATAGGAACGGTGTGCTCAAAGGAGGAGATAGTGATAT
ATCAGGGGGAAGTGCCCCCTCTTCCCACGGGGATTCCTTCGTACACAGTT
CAAATAATGAACATGTGCGCCAGTGATTGCGACATAGCAAACATACGCCT
CCACTGTGGGTGGTTCAGTTCAGCACGTTTGATAAACCCCAAAGTGTTTC
GCAGAGTGGGATACGATGATTGCCTAGTCAATGATGGAAAACCTCTTGCC
TCAGGAAAAACCGTCTCCTTTCAATATTCCAACACTTTTCGCTACCCTCT
CTCCGTTTCATCTGTTGTTTGCTCCTCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR040361TPD1