Vum_02G00130.1

Transcript Overview
NameVum_02G00130.1
Unique NamedrVigUmbe.FF25.1.0.Vum_02G00130.1
TypemRNA
OrganismVigna umbellata ()
Sequence length384
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr2chromosomeChr2:966931..967760 -Vigna umbellata FF25 genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna umbellata FF25 genome v1.02024-06-26
InterProScan Analysis for Vigna umbellata FF25 genome v1.0 2024-08-05
Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt TrEMBL2024-08-05
Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt Swissprot 2024-08-05
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjvumL052Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvumL0106Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvumL0305Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvumL0416Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvumL491Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvumL0832Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvumL629Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvumL1113Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvumL1166Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvumL1245Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
pvvumL047Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvumL167Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavumL449Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccvumL0754Cajanus cajan Asha genome v1.0Cajanus cajan
carvumL436Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
vfhvumL289Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
psvumL424Pisum sativum Cameor genome v1aPisum sativum
ccavumL663Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carvumL570Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccvumL1231Cajanus cajan Asha genome v1.0Cajanus cajan
vrvvumL209Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvumL393Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvumL800Pisum sativum Cameor genome v1aPisum sativum
vumvumR260Vigna umbellata FF25 genome v1.0Vigna umbellata
psvumL802Pisum sativum Cameor genome v1aPisum sativum
vumvumR273Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumL126Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vssvumL392Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvumL774Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvumL881Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vssvumL597Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvumL603Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvumL773Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvumL662Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvumL750Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vumvvaR422Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vumvvaR434Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvumL236Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvumL297Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvumL478Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvumL234Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvumL469Vigna angularis cv. Shumari genome v1.a1Vigna angularis

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.6g052680.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigst.06G191000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigan.06G222600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Phvul.011G045000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun11g175800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_012363Cajanus cajan Asha genome v1.0Cajanus cajan
evm.Ca_v2.0_15413Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Vfaba.Hedin2.R1.2g217720.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
XM_058926971.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-XM_014663016.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Va08G067750.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_17297Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat7g140640.1Pisum sativum Cameor genome v1aPisum sativum
Cc_v2.0_15001.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_03391Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_007886Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun09g265400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_23476Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.Ca_v2.0_19284Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
XM_058926980.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigan.02G006500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
jg56155.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.009G023700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat5g006800.1Pisum sativum Cameor genome v1aPisum sativum
Vigst.02G012200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va04G072340.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg30460.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cc_v2.0_09069.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_014644304.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vum_06G01554.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vum_02G00130drVigUmbe.FF25.1.0.Vum_02G00130Vigna umbellatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.Vum_02G00130.1.exon3drVigUmbe.FF25.1.0.Vum_02G00130.1.exon3Vigna umbellataexon
drVigUmbe.FF25.1.0.Vum_02G00130.1.exon2drVigUmbe.FF25.1.0.Vum_02G00130.1.exon2Vigna umbellataexon
drVigUmbe.FF25.1.0.Vum_02G00130.1.exon1drVigUmbe.FF25.1.0.Vum_02G00130.1.exon1Vigna umbellataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.cds.Vum_02G00130.1drVigUmbe.FF25.1.0.cds.Vum_02G00130.1Vigna umbellataCDS
drVigUmbe.FF25.1.0.cds.Vum_02G00130.1drVigUmbe.FF25.1.0.cds.Vum_02G00130.1_2Vigna umbellataCDS
drVigUmbe.FF25.1.0.cds.Vum_02G00130.1drVigUmbe.FF25.1.0.cds.Vum_02G00130.1_3Vigna umbellataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.Vum_02G00130.1drVigUmbe.FF25.1.0.Vum_02G00130.1Vigna umbellatapolypeptide
drVigUmbe.FF25.1.0.Vum_02G00130.1drVigUmbe.FF25.1.0.Vum_02G00130.1-proteinVigna umbellatapolypeptide


Homology
[Close]
BLAST of Vum_02G00130.1 vs. Araport11
Match: | (Symbols: RBGA3, GR-RBP7, CCR2, ATGRP7, GRP7, SRBP1 | RNA-binding glycine-rich protein A3, SMALL RNA-BINDING PROTEIN 1, GLYCINE RICH PROTEIN 7, "cold, circadian rhythm, and rna binding 2", GLYCINE-RICH RNA-BINDING PROTEIN 7 | chr2:9265477-9266316 REVERSE LENGTH=159)

HSP 1 Score: 138.658 bits (348), Expect = 9.858e-43
Identity = 64/85 (75.29%), Postives = 77/85 (90.59%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQ 85
            MAS +VE+RCFVGGLAWATD+ ALE AF+ YG +++SK+INDRETGRSRGFGFVTF  E+AM+DAI+GMNGQ+LDGR+ITVN AQ
Sbjct:    1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
[Close]
BLAST of Vum_02G00130.1 vs. Araport11
Match: | (Symbols: RBGA3, GR-RBP7, CCR2, ATGRP7, GRP7, SRBP1 | RNA-binding glycine-rich protein A3, SMALL RNA-BINDING PROTEIN 1, GLYCINE RICH PROTEIN 7, "cold, circadian rhythm, and rna binding 2", GLYCINE-RICH RNA-BINDING PROTEIN 7 | chr2:9265477-9266316 REVERSE LENGTH=176)

HSP 1 Score: 138.658 bits (348), Expect = 1.629e-42
Identity = 64/85 (75.29%), Postives = 77/85 (90.59%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQ 85
            MAS +VE+RCFVGGLAWATD+ ALE AF+ YG +++SK+INDRETGRSRGFGFVTF  E+AM+DAI+GMNGQ+LDGR+ITVN AQ
Sbjct:    1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
[Close]
BLAST of Vum_02G00130.1 vs. Araport11
Match: | (Symbols: RBGA6, CCR1, ATGRP8, GR-RBP8, GRP8 | "cold, circadian rhythm, and RNA binding 1", glycine-rich RNA-binding protein 8, GLYCINE-RICH PROTEIN 8, RNA-binding glycine-rich protein A6 | chr4:18274166-18274958 REVERSE LENGTH=92)

HSP 1 Score: 128.642 bits (322), Expect = 9.146e-40
Identity = 58/84 (69.05%), Postives = 74/84 (88.10%), Query Frame = 0 
Query:    4 AEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSR 87
            +EVE+RCFVGGLAWAT+++ L++ FS +G +++SK+INDRE+GRSRGFGFVTF  E+AMRDAI+ MNG+ LDGR ITVN AQSR
Sbjct:    2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSR 85
[Close]
BLAST of Vum_02G00130.1 vs. Araport11
Match: | (Symbols: RBGA6, CCR1, ATGRP8, GR-RBP8, GRP8 | "cold, circadian rhythm, and RNA binding 1", glycine-rich RNA-binding protein 8, GLYCINE-RICH PROTEIN 8, RNA-binding glycine-rich protein A6 | chr4:18274166-18274958 REVERSE LENGTH=126)

HSP 1 Score: 125.176 bits (313), Expect = 7.907e-38
Identity = 56/82 (68.29%), Postives = 72/82 (87.80%), Query Frame = 0 
Query:    4 AEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQ 85
            +EVE+RCFVGGLAWAT+++ L++ FS +G +++SK+INDRE+GRSRGFGFVTF  E+AMRDAI+ MNG+ LDGR ITVN AQ
Sbjct:    2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
[Close]
BLAST of Vum_02G00130.1 vs. Araport11
Match: | (Symbols: RBGA6, CCR1, ATGRP8, GR-RBP8, GRP8 | "cold, circadian rhythm, and RNA binding 1", glycine-rich RNA-binding protein 8, GLYCINE-RICH PROTEIN 8, RNA-binding glycine-rich protein A6 | chr4:18274166-18274958 REVERSE LENGTH=169)

HSP 1 Score: 125.176 bits (313), Expect = 2.773e-37
Identity = 56/82 (68.29%), Postives = 72/82 (87.80%), Query Frame = 0 
Query:    4 AEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQ 85
            +EVE+RCFVGGLAWAT+++ L++ FS +G +++SK+INDRE+GRSRGFGFVTF  E+AMRDAI+ MNG+ LDGR ITVN AQ
Sbjct:    2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
[Close]
BLAST of Vum_02G00130.1 vs. Araport11
Match: | (Symbols: RZ-1A, ATRZ-1A, RBGB2 | RNA-binding glycine-rich protein B2, RZ-1A | chr3:9671953-9673055 FORWARD LENGTH=245)

HSP 1 Score: 108.612 bits (270), Expect = 5.103e-30
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 0 
Query:    3 SAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSRGRGGGGGGGGYGGSRDRGY 106
            S + E+RCF+GGLAW T +  L  AF  YG ++E+KV+ D+ +GRSRGFGF+TF  ++AM +AI  MNG +LDGR ITV+ AQ    G G    G  G RDRGY
Sbjct:    2 SEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRG-RDRGY 104
[Close]
BLAST of Vum_02G00130.1 vs. Araport11
Match: | (Symbols: RBGA6, CCR1, ATGRP8, GR-RBP8, GRP8 | "cold, circadian rhythm, and RNA binding 1", glycine-rich RNA-binding protein 8, GLYCINE-RICH PROTEIN 8, RNA-binding glycine-rich protein A6 | chr4:18274166-18274958 REVERSE LENGTH=105)

HSP 1 Score: 104.375 bits (259), Expect = 6.577e-30
Identity = 45/67 (67.16%), Postives = 60/67 (89.55%), Query Frame = 0 
Query:    4 AEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMN 70
            +EVE+RCFVGGLAWAT+++ L++ FS +G +++SK+INDRE+GRSRGFGFVTF  E+AMRDAI+ MN
Sbjct:    2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68
[Close]
BLAST of Vum_02G00130.1 vs. Araport11
Match: | (Symbols: RBGA4, GRP4, AtGRP4, GR-RBP4 | RNA-binding glycine-rich protein A4, glycine-rich RNA-binding protein 4 | chr3:8606762-8607677 REVERSE LENGTH=136)

HSP 1 Score: 93.5893 bits (231), Expect = 2.721e-25
Identity = 42/79 (53.16%), Postives = 60/79 (75.95%), Query Frame = 0 
Query:    9 RCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSR 87
            + FVGGL+W TD+ +L++AF+ +G++ E+ VI DRETGRSRGFGFV+F+ E +  +AI  M+G+ L+GR I VN A  R
Sbjct:   36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATER 114
[Close]
BLAST of Vum_02G00130.1 vs. Araport11
Match: | (Symbols: RBGA4, GRP4, AtGRP4, GR-RBP4 | RNA-binding glycine-rich protein A4, glycine-rich RNA-binding protein 4 | chr3:8606762-8607677 REVERSE LENGTH=136)

HSP 1 Score: 93.5893 bits (231), Expect = 2.721e-25
Identity = 42/79 (53.16%), Postives = 60/79 (75.95%), Query Frame = 0 
Query:    9 RCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSR 87
            + FVGGL+W TD+ +L++AF+ +G++ E+ VI DRETGRSRGFGFV+F+ E +  +AI  M+G+ L+GR I VN A  R
Sbjct:   36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATER 114
[Close]
BLAST of Vum_02G00130.1 vs. Araport11
Match: | (Symbols: ATRBP33, ATRBP31, CP31A, RBP31, CP33a, CP31 | "ARABIDOPSIS THALIANA RNA BINDING PROTEIN, APPROXIMATELY 31 KD", 31-kDa RNA binding protein | chr4:12766223-12767952 REVERSE LENGTH=329)

HSP 1 Score: 95.5153 bits (236), Expect = 2.191e-24
Identity = 43/83 (51.81%), Postives = 59/83 (71.08%), Query Frame = 0 
Query:    5 EVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSR 87
            E  FR +VG L W  DN  LE+ FS +G+++E++V+ DRETGRSRGFGFVT +    + +AI  ++GQNL+GR I VN A+ R
Sbjct:  241 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEER 323

HSP 2 Score: 65.0846 bits (157), Expect = 3.236e-13
Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 0 
Query:    7 EFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSRG 88
            E + FVG LA+  ++ AL   F   G +  ++VI +RET +SRGFGFVT ++      A++  N  +L+GR +TVN A  RG
Sbjct:  149 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRG 230
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1U8A170|A0A1U8A170_NELNU (Glycine-rich RNA-binding protein GRP1A-like OS=Nelumbo nucifera OX=4432 GN=LOC104595682 PE=4 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.191e-52
Identity = 105/154 (68.18%), Postives = 117/154 (75.97%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSRGRGGGGGGGGYG---------------------------GSRDRGYGDGGSRYSRGGGASDGGSWRN 127
            MASA+VE+RCFVGGLAWATD+ +LE+AFSPYG+ILESK+INDRETGRSRGFGFVTF  EQ+MRDAI+GMNGQNLDGRNITVN AQSRG GGGGGGGG+                            G RDRGYGD GSRYSRG G+SD G+WRN
Sbjct:    1 MASADVEYRCFVGGLAWATDDQSLERAFSPYGEILESKIINDRETGRSRGFGFVTFRDEQSMRDAIEGMNGQNLDGRNITVNQAQSRGSGGGGGGGGFRSGGGGGGGGYGGYGRRDGGGGGYNRSLGGRDRGYGDRGSRYSRGDGSSD-GNWRN 153
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RAK8|A0A0S3RAK8_PHAAN (RRM domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G006500 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.201e-52
Identity = 126/184 (68.48%), Postives = 126/184 (68.48%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSRGRGGGGGG---------------------------------------------------------GGYGGSRDRGYGDGGSRYSRGGGASDGGSWRN 127
            MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSRGRGGGGG                                                          GGYGGSRDRGYGDGGSRYSRGGGASDGGSWRN
Sbjct:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSRGRGGGGGAGYGSGGGGGYGGGGGGGGYGRGGGGGGGYGGGGRREGGYNRNGGGGGYGGGGGGYGGGGYGGSRDRGYGDGGSRYSRGGGASDGGSWRN 184
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UHU1|A0A0L9UHU1_PHAAN (Glycine-rich RNA-binding protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0092670 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.201e-52
Identity = 126/184 (68.48%), Postives = 126/184 (68.48%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSRGRGGGGGG---------------------------------------------------------GGYGGSRDRGYGDGGSRYSRGGGASDGGSWRN 127
            MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSRGRGGGGG                                                          GGYGGSRDRGYGDGGSRYSRGGGASDGGSWRN
Sbjct:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSRGRGGGGGAGYGSGGGGGYGGGGGGGGYGRGGGGGGGYGGGGRREGGYNRNGGGGGYGGGGGGYGGGGYGGSRDRGYGDGGSRYSRGGGASDGGSWRN 184
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LF99|A0A8B8LF99_ABRPR (Glycine-rich RNA-binding protein 2-like isoform X6 OS=Abrus precatorius OX=3816 GN=LOC113864454 PE=4 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.097e-51
Identity = 112/146 (76.71%), Postives = 119/146 (81.51%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQ-------------------SRGRGGGGGGGGYGGSRDRGYGDGGSRYSRGGGASDGGSWRN 127
            MASAE+EFRCFVGGLAWATDNDALEKAFS +G+I+ESKVINDRETGRSRGFGFVTFATEQAM+DAI+GMNGQNLDGRNITVN AQ                     G GGG GGGGYGG RDRGYGDGG+RYSRGGGASD GSWRN
Sbjct:    1 MASAEIEFRCFVGGLAWATDNDALEKAFSSFGEIVESKVINDRETGRSRGFGFVTFATEQAMKDAIEGMNGQNLDGRNITVNEAQSRGRGGGGGGGYGSGGGGYGGGGGGGYGGGGYGGGRDRGYGDGGARYSRGGGASD-GSWRN 145
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151U7A9|A0A151U7A9_CAJCA (Glycine-rich RNA-binding protein GRP1A OS=Cajanus cajan OX=3821 GN=KK1_007886 PE=4 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 6.454e-50
Identity = 78/86 (90.70%), Postives = 84/86 (97.67%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQS 86
            M+SAE+E+RCFVGGLAWATDNDALEKAFS YG+I+ESKVINDRETGRSRGFGFVTFATEQAMRDAI+GMNGQNLDGRNITVN AQS
Sbjct:    1 MSSAEIEYRCFVGGLAWATDNDALEKAFSQYGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEGMNGQNLDGRNITVNEAQS 86
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3U191|A0A1S3U191_VIGRR (Glycine-rich RNA-binding protein GRP1A OS=Vigna radiata var. radiata OX=3916 GN=LOC106760868 PE=4 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 8.956e-50
Identity = 126/187 (67.38%), Postives = 127/187 (67.91%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSRGRGGGGGG------------------------------------------------------------GGYGGSRDRGYGDGGSRYSRGGGASDGGSWRN 127
            MASAEVEFRCFVGGLAWATD+DALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSRGRGGGGGG                                                            GGYGGSRDRGYGDGGSRYSRGGGASDGGSWRN
Sbjct:    1 MASAEVEFRCFVGGLAWATDSDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSRGRGGGGGGGGGYGSGGGGGYGGGSGGGGYGRGGGGGGYGGGGRREGGYNRNGGGGGYGGGGGGYGGGGGGYGGSRDRGYGDGGSRYSRGGGASDGGSWRN 187
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LCM2|A0A8B8LCM2_ABRPR (Glycine-rich RNA-binding protein 7-like isoform X8 OS=Abrus precatorius OX=3816 GN=LOC113864454 PE=4 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.431e-49
Identity = 77/85 (90.59%), Postives = 83/85 (97.65%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQ 85
            MASAE+EFRCFVGGLAWATDNDALEKAFS +G+I+ESKVINDRETGRSRGFGFVTFATEQAM+DAI+GMNGQNLDGRNITVN AQ
Sbjct:    1 MASAEIEFRCFVGGLAWATDNDALEKAFSSFGEIVESKVINDRETGRSRGFGFVTFATEQAMKDAIEGMNGQNLDGRNITVNEAQ 85
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LCM1|A0A8B8LCM1_ABRPR (Glycine-rich RNA-binding protein 2-like isoform X5 OS=Abrus precatorius OX=3816 GN=LOC113864454 PE=4 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.513e-49
Identity = 112/155 (72.26%), Postives = 119/155 (76.77%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQ----------------------------SRGRGGGGGGGGYGGSRDRGYGDGGSRYSRGGGASDGGSWRN 127
            MASAE+EFRCFVGGLAWATDNDALEKAFS +G+I+ESKVINDRETGRSRGFGFVTFATEQAM+DAI+GMNGQNLDGRNITVN AQ                              G GGG GGGGYGG RDRGYGDGG+RYSRGGGASD GSWRN
Sbjct:    1 MASAEIEFRCFVGGLAWATDNDALEKAFSSFGEIVESKVINDRETGRSRGFGFVTFATEQAMKDAIEGMNGQNLDGRNITVNEAQSRGRGGGGGYGGGGRREGGYSRNGGGGYGGGGGGGYGGGGYGGGRDRGYGDGGARYSRGGGASD-GSWRN 154
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TGE0|A0A151TGE0_CAJCA (Glycine-rich RNA-binding protein 7 OS=Cajanus cajan OX=3821 GN=KK1_012367 PE=4 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.618e-49
Identity = 94/125 (75.20%), Postives = 105/125 (84.00%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSRGRGGGGGGGGYGGSRDRGYGDGGSRYSRGGGASDGGSW 125
            MA+A+VE+RCFVGGLAWATD+DALEKAFS YG ++ESK+INDRETGRSRGFGFVTF++EQAM+DAI+GMNGQNLDGRNITVN AQSRG GGGG           GYGDGGSRYSRGG     GSW
Sbjct:    1 MAAADVEYRCFVGGLAWATDSDALEKAFSQYGDVVESKIINDRETGRSRGFGFVTFSSEQAMKDAIEGMNGQNLDGRNITVNEAQSRGSGGGGSRDR-------GYGDGGSRYSRGGDGGAEGSW 118
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TGA9|A0A151TGA9_CAJCA (Glycine-rich RNA-binding protein GRP1A OS=Cajanus cajan OX=3821 GN=KK1_012366 PE=4 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 4.635e-49
Identity = 77/89 (86.52%), Postives = 86/89 (96.63%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSRGR 89
            MASA+VEFRCFVGGLAWATD+DALEKAFS YG I++SK+INDRETGRSRGFGFVTFA+EQ+M+DAI+GMNGQNLDGRNITVN AQSRGR
Sbjct:    1 MASADVEFRCFVGGLAWATDSDALEKAFSLYGDIVDSKIINDRETGRSRGFGFVTFASEQSMKDAIEGMNGQNLDGRNITVNEAQSRGR 89
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P49310|GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba OX=3728 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 6.903e-43
Identity = 65/85 (76.47%), Postives = 78/85 (91.76%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQ 85
            MAS +VE+RCFVGGLAWATD+ ALE AFS YG++L+SK+INDRETGRSRGFGFVTF  E++M+DAI+GMNGQ+LDGR+ITVN AQ
Sbjct:    1 MASPDVEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|A0A0A0LLY1|SRBP1_CUCSA (Small RNA binding protein 1 OS=Cucumis sativus OX=3659 GN=SRBP1 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.099e-42
Identity = 64/85 (75.29%), Postives = 76/85 (89.41%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQ 85
            MAS+ VEFRCFVGGLAWATD+++LEKAFS YG+I+E+K+++DRETGRSRGFGFVTF  E+AMR AI+ MNG  LDGRNITVN AQ
Sbjct:    1 MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQ 85
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q99070|GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor OX=4558 GN=GRP2 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.933e-42
Identity = 63/86 (73.26%), Postives = 79/86 (91.86%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQS 86
            MA+A+VE+RCFVGGLAWAT+N+ LE+AF+ +GQ+++SKVI DRETGRSRGFGFVTF++EQ+M DAI+ MNG+ LDGRNITVN AQS
Sbjct:    1 MAAADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQS 86
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P10979|GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays OX=4577 GN=RAB15 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 6.427e-42
Identity = 64/86 (74.42%), Postives = 77/86 (89.53%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQS 86
            MA+A+VE+RCFVGGLAWAT N++LE AF+ YG+IL+SKVI DRETGRSRGFGFVTF++E +M DAI+ MNG+ LDGRNITVN AQS
Sbjct:    1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQS 86
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q03878|GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.086e-41
Identity = 64/83 (77.11%), Postives = 76/83 (91.57%), Query Frame = 0 
Query:    4 AEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQS 86
            AEVE+RCFVGGLAWAT++++LE+AFS +G I +SK+INDRETGRSRGFGFVTF  E++MRDAI+GMNGQ LDGRNITVN AQS
Sbjct:    2 AEVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQS 84
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q03250|RBG7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBG7 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.565e-41
Identity = 64/85 (75.29%), Postives = 77/85 (90.59%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQ 85
            MAS +VE+RCFVGGLAWATD+ ALE AF+ YG +++SK+INDRETGRSRGFGFVTF  E+AM+DAI+GMNGQ+LDGR+ITVN AQ
Sbjct:    1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P49311|GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 6.332e-41
Identity = 62/85 (72.94%), Postives = 77/85 (90.59%), Query Frame = 0 
Query:    1 MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQ 85
            MAS +VE+RCFVGGLAWATD  +LE AFS +G++++SK+INDRETGRSRGFGFVTF  E++M+DAI+GMNGQ+LDGR+ITVN AQ
Sbjct:    1 MASPDVEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q43472|GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.230e-40
Identity = 61/84 (72.62%), Postives = 75/84 (89.29%), Query Frame = 0 
Query:    4 AEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSR 87
            A+VE+RCFVGGL WATD+ +L+ AFS YG +++SK+I DRETGRSRGFGFVTFA+++AMR AI+ MNGQ+LDGRNITVN AQSR
Sbjct:    2 ADVEYRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQSR 85
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q05966|GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=3708 GN=GRP10 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.183e-37
Identity = 58/83 (69.88%), Postives = 72/83 (86.75%), Query Frame = 0 
Query:    4 AEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQS 86
            +EVE+RCFVGGLAWAT +  LE+ FS +G++++SK+INDRETGRSRGFGFVTF  E++M+DAID MNG+ LDGR ITVN AQS
Sbjct:    2 SEVEYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQS 84
[Close]
BLAST of Vum_02G00130.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q03251|RBG8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=RBG8 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.667e-36
Identity = 56/82 (68.29%), Postives = 72/82 (87.80%), Query Frame = 0 
Query:    4 AEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQ 85
            +EVE+RCFVGGLAWAT+++ L++ FS +G +++SK+INDRE+GRSRGFGFVTF  E+AMRDAI+ MNG+ LDGR ITVN AQ
Sbjct:    2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
The following BLAST results are available for this feature:
BLAST of Vum_02G00130.1 vs. Araport11
Analysis Date: 2024-06-26 (Vigna umbellata FF25 genome v1.0)
Total hits: 10
Match NameE-valueIdentityDescription
|9.858e-4375.29Symbols: RBGA3, GR-RBP7, CCR2, ATGRP7, GRP7, SRBP1... [more]
|1.629e-4275.29Symbols: RBGA3, GR-RBP7, CCR2, ATGRP7, GRP7, SRBP1... [more]
|9.146e-4069.05Symbols: RBGA6, CCR1, ATGRP8, GR-RBP8, GRP8 | "col... [more]
|7.907e-3868.29Symbols: RBGA6, CCR1, ATGRP8, GR-RBP8, GRP8 | "col... [more]
|2.773e-3768.29Symbols: RBGA6, CCR1, ATGRP8, GR-RBP8, GRP8 | "col... [more]
|5.103e-3052.88Symbols: RZ-1A, ATRZ-1A, RBGB2 | RNA-binding glyci... [more]
|6.577e-3067.16Symbols: RBGA6, CCR1, ATGRP8, GR-RBP8, GRP8 | "col... [more]
|2.721e-2553.16Symbols: RBGA4, GRP4, AtGRP4, GR-RBP4 | RNA-bindin... [more]
|2.721e-2553.16Symbols: RBGA4, GRP4, AtGRP4, GR-RBP4 | RNA-bindin... [more]
|2.191e-2451.81Symbols: ATRBP33, ATRBP31, CP31A, RBP31, CP33a, CP... [more]
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BLAST of Vum_02G00130.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-05 (Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1U8A170|A0A1U8A170_NELNU5.191e-5268.18Glycine-rich RNA-binding protein GRP1A-like OS=Nel... [more]
tr|A0A0S3RAK8|A0A0S3RAK8_PHAAN8.201e-5268.48RRM domain-containing protein OS=Vigna angularis v... [more]
tr|A0A0L9UHU1|A0A0L9UHU1_PHAAN8.201e-5268.48Glycine-rich RNA-binding protein OS=Phaseolus angu... [more]
tr|A0A8B8LF99|A0A8B8LF99_ABRPR8.097e-5176.71Glycine-rich RNA-binding protein 2-like isoform X6... [more]
tr|A0A151U7A9|A0A151U7A9_CAJCA6.454e-5090.70Glycine-rich RNA-binding protein GRP1A OS=Cajanus ... [more]
tr|A0A1S3U191|A0A1S3U191_VIGRR8.956e-5067.38Glycine-rich RNA-binding protein GRP1A OS=Vigna ra... [more]
tr|A0A8B8LCM2|A0A8B8LCM2_ABRPR1.431e-4990.59Glycine-rich RNA-binding protein 7-like isoform X8... [more]
tr|A0A8B8LCM1|A0A8B8LCM1_ABRPR2.513e-4972.26Glycine-rich RNA-binding protein 2-like isoform X5... [more]
tr|A0A151TGE0|A0A151TGE0_CAJCA2.618e-4975.20Glycine-rich RNA-binding protein 7 OS=Cajanus caja... [more]
tr|A0A151TGA9|A0A151TGA9_CAJCA4.635e-4986.52Glycine-rich RNA-binding protein GRP1A OS=Cajanus ... [more]
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BLAST of Vum_02G00130.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-05 (Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt Swissprot )
Total hits: 10
Match NameE-valueIdentityDescription
sp|P49310|GRP1_SINAL6.903e-4376.47Glycine-rich RNA-binding protein GRP1A OS=Sinapis ... [more]
sp|A0A0A0LLY1|SRBP1_CUCSA1.099e-4275.29Small RNA binding protein 1 OS=Cucumis sativus OX=... [more]
sp|Q99070|GRP2_SORBI3.933e-4273.26Glycine-rich RNA-binding protein 2 OS=Sorghum bico... [more]
sp|P10979|GRPA_MAIZE6.427e-4274.42Glycine-rich RNA-binding, abscisic acid-inducible ... [more]
sp|Q03878|GRP1_DAUCA1.086e-4177.11Glycine-rich RNA-binding protein OS=Daucus carota ... [more]
sp|Q03250|RBG7_ARATH1.565e-4175.29Glycine-rich RNA-binding protein 7 OS=Arabidopsis ... [more]
sp|P49311|GRP2_SINAL6.332e-4172.94Glycine-rich RNA-binding protein GRP2A OS=Sinapis ... [more]
sp|Q43472|GRP_HORVU2.230e-4072.62Glycine-rich RNA-binding protein blt801 OS=Hordeum... [more]
sp|Q05966|GRP10_BRANA1.183e-3769.88Glycine-rich RNA-binding protein 10 OS=Brassica na... [more]
sp|Q03251|RBG8_ARATH2.667e-3668.29Glycine-rich RNA-binding protein 8 OS=Arabidopsis ... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna umbellata FF25 genome v1.0
Date Performed: 2024-08-05
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.70.330:FF:000430coord: 2..126
e-value: 1.5E-53
score: 181.7
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 2..123
e-value: 9.3E-33
score: 115.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 11..80
e-value: 1.1E-19
score: 81.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 8..86
score: 19.246052
IPR050886RNA-binding_regulatory_proteinsPANTHERPTHR48024GEO13361P1-RELATEDcoord: 6..88
IPR048289NsCP33-like, RNA recognition motif 2CDDcd21608RRM2_NsCP33_likecoord: 9..84
e-value: 1.00131E-37
score: 120.737
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 8..118

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigUmbe.FF25.1.0.Vum_02G00130.1 ID=drVigUmbe.FF25.1.0.Vum_02G00130.1; Name=Vum_02G00130.1; organism=Vigna umbellata; type=mRNA; length=384bp
ATGGCTTCTGCAGAAGTTGAGTTCCGATGCTTTGTCGGTGGGCTTGCTTG
GGCCACTGACAACGATGCTCTCGAGAAAGCCTTCTCACCGTATGGCCAGA
TCCTCGAATCGAAGGTCATCAACGACCGTGAAACTGGAAGATCAAGAGGG
TTTGGATTTGTGACCTTCGCCACGGAGCAGGCGATGAGAGACGCTATCGA
TGGTATGAACGGCCAGAACCTTGACGGCCGTAACATCACCGTCAACGCGG
CTCAGTCCCGTGGAAGAGGTGGTGGAGGCGGCGGTGGTGGTTATGGAGGT
AGCAGGGACCGTGGATATGGTGATGGTGGGTCCCGCTACTCGAGAGGAGG
TGGTGCTTCCGATGGTGGAAGCTGGAGGAATTAG
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protein sequence of drVigUmbe.FF25.1.0.Vum_02G00130.1

>drVigUmbe.FF25.1.0.Vum_02G00130.1 ID=drVigUmbe.FF25.1.0.Vum_02G00130.1; Name=drVigUmbe.FF25.1.0.Vum_02G00130.1; organism=Vigna umbellata; type=polypeptide; length=127bp
MASAEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRG
FGFVTFATEQAMRDAIDGMNGQNLDGRNITVNAAQSRGRGGGGGGGGYGG
SRDRGYGDGGSRYSRGGGASDGGSWRN
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mRNA from alignment at Chr2:966931..967760-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigUmbe.FF25.1.0.Vum_02G00130.1 ID=drVigUmbe.FF25.1.0.Vum_02G00130.1; Name=Vum_02G00130.1; organism=Vigna umbellata; type=mRNA; length=830bp; location=Sequence derived from: Chr2:966931..967760- (Vigna umbellata
ATGGCTTCTGCAGAAGTTGAGTTCCGATGCTTTGTCGGTGGGCTTGCTTG
GGCCACTGACAACGATGCTCTCGAGAAAGCCTTCTCACCGTATGGCCAGA
TCCTCGAATCGAAGGTCCGTTAGTCGCAGGGATCGGATCTGACACCATTC
GGATTTGGATTCTCTTGATCCTTCTTGATCTGTGCTCTCTCATCTGTTTT
GCGTTACTTGATCTATGATACTTGTGTTACTATAATGATTCTTTTATTAC
TCACACCAATCGGTACGTTCATCTTCATCTTTGATTCAAAGGCGAAGATC
GATCGGTTTTAATCTGTTTCTTTTTTTCTTCATTTTCCCTGAATTTCACG
GTTCTGAATCCGATCTCACGCGCTTTTGCTTTTGTTTGTGTTCAGGTCAT
CAACGACCGTGAAACTGGAAGATCAAGAGGGTTTGGATTTGTGACCTTCG
CCACGGAGCAGGCGATGAGAGACGCTATCGATGGTATGAACGGCCAGAAC
CTTGACGGCCGTAACATCACCGTCAACGCGGCTCAGTCCCGTGGAAGAGG
TGGTGGAGGCGGCGGTGGTTATGGAAGCGGCGGTGGAGGTTACGGTGGGG
GTGGCGGTGGAGGAGGATATGGACGAGGTGGTGGTGGAGGTGGTTACGGT
GGAGGCGGCCGCCGTGAAGGTGGTTATAACCGTAATGGTGGTGGTGGTGG
TTATGGCGGGGGCGGCGGTGGATACGGAGGTGGTGGTTATGGAGGTAGCA
GGGACCGTGGATATGGTGATGGTGGGTCCCGCTACTCGAGAGGAGGTGGT
GCTTCCGATGGTGGAAGCTGGAGGAATTAG
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Coding sequence (CDS) from alignment at Chr2:966931..967760-

>drVigUmbe.FF25.1.0.Vum_02G00130.1 ID=drVigUmbe.FF25.1.0.Vum_02G00130.1; Name=Vum_02G00130.1; organism=Vigna umbellata; type=CDS; length=384bp; location=Sequence derived from: Chr2:966931..967760- (Vigna umbellata
ATGGCTTCTGCAGAAGTTGAGTTCCGATGCTTTGTCGGTGGGCTTGCTTG
GGCCACTGACAACGATGCTCTCGAGAAAGCCTTCTCACCGTATGGCCAGA
TCCTCGAATCGAAGGTCATCAACGACCGTGAAACTGGAAGATCAAGAGGG
TTTGGATTTGTGACCTTCGCCACGGAGCAGGCGATGAGAGACGCTATCGA
TGGTATGAACGGCCAGAACCTTGACGGCCGTAACATCACCGTCAACGCGG
CTCAGTCCCGTGGAAGAGGTGGTGGAGGCGGCGGTGGTGGTTATGGAGGT
AGCAGGGACCGTGGATATGGTGATGGTGGGTCCCGCTACTCGAGAGGAGG
TGGTGCTTCCGATGGTGGAAGCTGGAGGAATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR050886RNA-binding_reg
IPR048289RRM2_NsCP33-like
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding