Vum_03G01922.1

Transcript Overview
NameVum_03G01922.1
Unique NamedrVigUmbe.FF25.1.0.Vum_03G01922.1
TypemRNA
OrganismVigna umbellata ()
Sequence length699
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr3chromosomeChr3:38313220..38315539 -Vigna umbellata FF25 genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna umbellata FF25 genome v1.02024-06-26
InterProScan Analysis for Vigna umbellata FF25 genome v1.0 2024-08-05
Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt TrEMBL2024-08-05
Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt Swissprot 2024-08-05
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvumL0112Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvumL0375Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvumL247Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvumL0550Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvumL498Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvumL0838Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvumL591Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvumL0995Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvumL631Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvumL1118Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvumL1125Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
pvvumL058Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vfhvumL083Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
carvumL356Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavumL526Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumL319Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
carvumL463Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
vfhvumL323Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavumL619Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumL127Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvumL468Pisum sativum Cameor genome v1aPisum sativum
ccvumL1157Cajanus cajan Asha genome v1.0Cajanus cajan
ccavumL670Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carvumL584Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccvumL1236Cajanus cajan Asha genome v1.0Cajanus cajan
ccvumL1320Cajanus cajan Asha genome v1.0Cajanus cajan
vfhvumL477Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
psvumL683Pisum sativum Cameor genome v1aPisum sativum
psvumL699Pisum sativum Cameor genome v1aPisum sativum
vumvumL224Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumL596Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vumvumL256Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumL405Vigna radiata cv. VC1973A genome v6.0Vigna radiata
carvumL773Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
vrvvumL473Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvumL424Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvumL212Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvumL917Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vssvumL626Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvumL629Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvumL904Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvumL677Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvumL760Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vumvvaR494Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vumvvaR496Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vumvvaR499Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vumvvaR527Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvumL148Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvumL251Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvumL301Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.001G020600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun08g022500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.3g225040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigst.03G173700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
jg35293.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_24488Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va07G068970.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-KK1_027283Cajanus cajan Asha genome v1.0Cajanus cajan
XM_058869190.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
evm.Ca_v2.0_11856Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Psat6g012760.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_014649316.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Cc_v2.0_10813.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_14659Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vum_03G01922drVigUmbe.FF25.1.0.Vum_03G01922Vigna umbellatagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.cds.Vum_03G01922.1drVigUmbe.FF25.1.0.cds.Vum_03G01922.1Vigna umbellataCDS
drVigUmbe.FF25.1.0.cds.Vum_03G01922.1drVigUmbe.FF25.1.0.cds.Vum_03G01922.1_2Vigna umbellataCDS
drVigUmbe.FF25.1.0.cds.Vum_03G01922.1drVigUmbe.FF25.1.0.cds.Vum_03G01922.1_3Vigna umbellataCDS
drVigUmbe.FF25.1.0.cds.Vum_03G01922.1drVigUmbe.FF25.1.0.cds.Vum_03G01922.1_4Vigna umbellataCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.Vum_03G01922.1.exon4drVigUmbe.FF25.1.0.Vum_03G01922.1.exon4Vigna umbellataexon
drVigUmbe.FF25.1.0.Vum_03G01922.1.exon3drVigUmbe.FF25.1.0.Vum_03G01922.1.exon3Vigna umbellataexon
drVigUmbe.FF25.1.0.Vum_03G01922.1.exon2drVigUmbe.FF25.1.0.Vum_03G01922.1.exon2Vigna umbellataexon
drVigUmbe.FF25.1.0.Vum_03G01922.1.exon1drVigUmbe.FF25.1.0.Vum_03G01922.1.exon1Vigna umbellataexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.Vum_03G01922.1drVigUmbe.FF25.1.0.Vum_03G01922.1Vigna umbellatapolypeptide
drVigUmbe.FF25.1.0.Vum_03G01922.1drVigUmbe.FF25.1.0.Vum_03G01922.1-proteinVigna umbellatapolypeptide


Homology
BLAST of Vum_03G01922.1 vs. Araport11
Match: | (Symbols: SDH5 | succinate dehydrogenase 5 | chr1:17395774-17397176 REVERSE LENGTH=257)

HSP 1 Score: 267.7 bits (683), Expect = 1.344e-90
Identity = 125/221 (56.56%), Postives = 167/221 (75.57%), Query Frame = 0
Query:   26 NHILRSTSLLSPSPNP------------FPSPSS--SECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAADWGKVTVLGTSGLAGSYVEQRA 232
             H+ R  +L++ +PN             F S +S   + + P +MG+G +R FSEDV+H+P ++D ++ N FKDL+A +W+ELP +VV + K  +S+NTDDKAG+E ++NVFRAA+AVEEFGGIL S+K+E+DDSIG+SGE VKPLP  I  AL   + RY+ YL+SF P+E YL+KKVE+ELG+ MIHLKMRCSGL ++WGKVTVLGTSGL+GSYVEQRA
Sbjct:   37 KHLSRHRTLITVAPNASVIGDVQINKGSFISYASVSRDLQYPRAMGMGQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYLDSFEPEEVYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSGSYVEQRA 257          
BLAST of Vum_03G01922.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0K106|A0A8T0K106_PHAAN (Succinate dehydrogenase subunit 5 OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0222050 PE=4 SV=1)

HSP 1 Score: 471.855 bits (1213), Expect = 5.024e-168
Identity = 231/232 (99.57%), Postives = 232/232 (100.00%), Query Frame = 0
Query:    1 MEKMMRLRSLFRSMSLRSYHAFSSTNHILRSTSLLSPSPNPFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAADWGKVTVLGTSGLAGSYVEQRA 232
            MEKMMRLRSLFRSMSLRSYHAFSSTNHILRSTSLLSPSP+PFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAADWGKVTVLGTSGLAGSYVEQRA
Sbjct:    1 MEKMMRLRSLFRSMSLRSYHAFSSTNHILRSTSLLSPSPSPFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAADWGKVTVLGTSGLAGSYVEQRA 232          
BLAST of Vum_03G01922.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3UFJ7|A0A1S3UFJ7_VIGRR (Succinate dehydrogenase subunit 5, mitochondrial OS=Vigna radiata var. radiata OX=3916 GN=LOC106764883 PE=4 SV=1)

HSP 1 Score: 467.618 bits (1202), Expect = 2.142e-166
Identity = 228/232 (98.28%), Postives = 231/232 (99.57%), Query Frame = 0
Query:    1 MEKMMRLRSLFRSMSLRSYHAFSSTNHILRSTSLLSPSPNPFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAADWGKVTVLGTSGLAGSYVEQRA 232
            MEKMMR+RSLFRSMS RSYHAFSSTNH+LRSTSLLSPSPNPFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAA+WGKVTVLGTSGLAGSYVEQRA
Sbjct:    1 MEKMMRVRSLFRSMSRRSYHAFSSTNHVLRSTSLLSPSPNPFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAAEWGKVTVLGTSGLAGSYVEQRA 232          
BLAST of Vum_03G01922.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7CRT5|V7CRT5_PHAVU (Succinate dehydrogenase subunit 5 OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G020600g PE=4 SV=1)

HSP 1 Score: 436.417 bits (1121), Expect = 6.231e-154
Identity = 212/232 (91.38%), Postives = 223/232 (96.12%), Query Frame = 0
Query:    1 MEKMMRLRSLFRSMSLRSYHAFSSTNHILRSTSLLSPSPNPFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAADWGKVTVLGTSGLAGSYVEQRA 232
            MEKMMRLRSLFRS+S RSYHAFSST HIL STSLLS SPN FPSPSSSECRSPFSMGLGSMRFFSEDVTH+PNIKDPELYN FKDLLAVNWSELPDSVV +VKNVLSRNTDDKAGKEVVENVFRAA+AVEEFGGILVSLKLE+DDSIGVSGEDVKPLP HIK+ALNLIFDRYSTYLNSFGPDE+YLRKKVE+ELG+SMI+LKMRCSGL A+WGKVTVLGTSGLAGSYVEQRA
Sbjct:    1 MEKMMRLRSLFRSLSCRSYHAFSSTKHILPSTSLLSHSPNHFPSPSSSECRSPFSMGLGSMRFFSEDVTHMPNIKDPELYNAFKDLLAVNWSELPDSVVHDVKNVLSRNTDDKAGKEVVENVFRAAEAVEEFGGILVSLKLEIDDSIGVSGEDVKPLPNHIKNALNLIFDRYSTYLNSFGPDENYLRKKVEIELGASMINLKMRCSGLGAEWGKVTVLGTSGLAGSYVEQRA 232          
BLAST of Vum_03G01922.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6MGQ2|A0A4D6MGQ2_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g222 PE=4 SV=1)

HSP 1 Score: 429.483 bits (1103), Expect = 3.062e-151
Identity = 223/232 (96.12%), Postives = 229/232 (98.71%), Query Frame = 0
Query:    1 MEKMMRLRSLFRSMSLRSYHAFSSTNHILRSTSLLSPSPNPFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAADWGKVTVLGTSGLAGSYVEQRA 232
            MEKMMRLRSLFRS+S RSYHAFSSTNHILRSTSLLSPSPNPFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVS+VK VLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLE+DDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDE+YLRKKVEVELG+SMIHLKMRCSGL A+WGKVTVLGTSGLAGSYVEQRA
Sbjct:    1 MEKMMRLRSLFRSLSCRSYHAFSSTNHILRSTSLLSPSPNPFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSDVKKVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLEIDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDENYLRKKVEVELGASMIHLKMRCSGLGAEWGKVTVLGTSGLAGSYVEQRA 232          
BLAST of Vum_03G01922.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86STZ5|A0AA86STZ5_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS24723 PE=4 SV=1)

HSP 1 Score: 402.134 bits (1032), Expect = 2.492e-140
Identity = 200/235 (85.11%), Postives = 220/235 (93.62%), Query Frame = 0
Query:    1 MEKMMRLRSLFRSMSLRSYHAFSSTNHILRSTSLLSPSPNPFPSP---SSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAADWGKVTVLGTSGLAGSYVEQRA 232
            MEKMMRLRSLFRS++ RSYH FS+TNHILRSTSLLSP+P P  SP   + +ECRSPFSMGLGSMRF+SEDVTH+PNIKDPELYNVFKDLLAVNW ELPDSVV +VK  LS+NTDDKAGKEVVENVFRAA+AVEEFGGILVSLKLE+DDSIGVSGEDVKPLP HI++AL++IFDRYSTYLNSFGPDE+YLRKKVE+ELG+SMIHLKMRCSGL A+WGKVTVLGTSGLAGSYVEQRA
Sbjct:    1 MEKMMRLRSLFRSLNGRSYHVFSATNHILRSTSLLSPAPIPLSSPSSSACTECRSPFSMGLGSMRFYSEDVTHMPNIKDPELYNVFKDLLAVNWRELPDSVVYDVKKALSQNTDDKAGKEVVENVFRAAEAVEEFGGILVSLKLEIDDSIGVSGEDVKPLPNHIRNALSIIFDRYSTYLNSFGPDENYLRKKVEIELGASMIHLKMRCSGLGAEWGKVTVLGTSGLAGSYVEQRA 235          
BLAST of Vum_03G01922.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1M8K9|I1M8K9_SOYBN (Succinate dehydrogenase subunit 5, mitochondrial OS=Glycine max OX=3847 GN=GLYMA_14G081700 PE=4 SV=1)

HSP 1 Score: 400.979 bits (1029), Expect = 5.206e-140
Identity = 191/232 (82.33%), Postives = 209/232 (90.09%), Query Frame = 0
Query:    1 MEKMMRLRSLFRSMSLRSYHAFSSTNHILRSTSLLSPSPNPFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAADWGKVTVLGTSGLAGSYVEQRA 232
            MEKMMRLR LFRS+S RSYHAF   NH++   SL+S SPNP PSPS SEC SPFSMGLGSMRF+SED+TH+PNIKDP LYN FKDL+AV+WSELPDSVVS+VKNVLS+NTDDKAGKE VENVFRAA+A+EEFGGILVSLKLE DDSIG+SGEDVKPLP HIK+AL   FDRYSTYLNSFGPDE+YLRKKVE ELG+ MIHLKMRCSGL A+WGKVTVLGTSGLAGSYVEQRA
Sbjct:    1 MEKMMRLRPLFRSLSCRSYHAFPFINHVVLRPSLISRSPNPLPSPSHSECMSPFSMGLGSMRFYSEDLTHVPNIKDPALYNAFKDLMAVSWSELPDSVVSDVKNVLSKNTDDKAGKEAVENVFRAAEAIEEFGGILVSLKLEFDDSIGLSGEDVKPLPDHIKNALCTTFDRYSTYLNSFGPDENYLRKKVETELGAKMIHLKMRCSGLGAEWGKVTVLGTSGLAGSYVEQRA 232          
BLAST of Vum_03G01922.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2RTH5|A0A0B2RTH5_GLYSO (Succinate dehydrogenase subunit 5, mitochondrial isoform A OS=Glycine soja OX=3848 GN=D0Y65_038037 PE=4 SV=1)

HSP 1 Score: 400.979 bits (1029), Expect = 5.206e-140
Identity = 191/232 (82.33%), Postives = 209/232 (90.09%), Query Frame = 0
Query:    1 MEKMMRLRSLFRSMSLRSYHAFSSTNHILRSTSLLSPSPNPFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAADWGKVTVLGTSGLAGSYVEQRA 232
            MEKMMRLR LFRS+S RSYHAF   NH++   SL+S SPNP PSPS SEC SPFSMGLGSMRF+SED+TH+PNIKDP LYN FKDL+AV+WSELPDSVVS+VKNVLS+NTDDKAGKE VENVFRAA+A+EEFGGILVSLKLE DDSIG+SGEDVKPLP HIK+AL   FDRYSTYLNSFGPDE+YLRKKVE ELG+ MIHLKMRCSGL A+WGKVTVLGTSGLAGSYVEQRA
Sbjct:    1 MEKMMRLRPLFRSLSCRSYHAFPFINHVVLRPSLISRSPNPLPSPSHSECMSPFSMGLGSMRFYSEDLTHVPNIKDPALYNAFKDLMAVSWSELPDSVVSDVKNVLSKNTDDKAGKEAVENVFRAAEAIEEFGGILVSLKLEFDDSIGLSGEDVKPLPDHIKNALCTTFDRYSTYLNSFGPDENYLRKKVETELGAKMIHLKMRCSGLGAEWGKVTVLGTSGLAGSYVEQRA 232          
BLAST of Vum_03G01922.1 vs. ExPASy TrEMBL (2024)
Match: tr|C6T518|C6T518_SOYBN (Succinate dehydrogenase subunit 5, mitochondrial OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 7.460e-132
Identity = 181/222 (81.53%), Postives = 199/222 (89.64%), Query Frame = 0
Query:    1 MEKMMRLRSLFRSMSLRSYHAFSSTNHILRSTSLLSPSPNPFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAADWGKVTVLGTSG 222
            MEKMMRLR LFRS+S RSYHAF   NH++   SL+S SPNP PSPS SEC SPFSMGLGSMRF+SED+TH+PNIKDP LYN FKDL+AV+WSELPDSVVS+VKNVLS+NTDDKAGKE VENVFRAA+A+EEFGGILVSLKLE DDSIG+SGEDVKPLP HIK+AL   FDRYSTYLNSFGPDE+YLRKKVE ELG+ MIHLKMRCSGL A+WGKVTVLGTSG
Sbjct:    1 MEKMMRLRPLFRSLSCRSYHAFPFINHVVLRPSLISRSPNPLPSPSHSECMSPFSMGLGSMRFYSEDLTHVPNIKDPALYNAFKDLMAVSWSELPDSVVSDVKNVLSKNTDDKAGKEAVENVFRAAEAIEEFGGILVSLKLEFDDSIGLSGEDVKPLPDHIKNALCTTFDRYSTYLNSFGPDENYLRKKVETELGAKMIHLKMRCSGLGAEWGKVTVLGTSG 222          
BLAST of Vum_03G01922.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445H367|A0A445H367_GLYSO (Succinate dehydrogenase subunit 5, mitochondrial isoform C OS=Glycine soja OX=3848 GN=D0Y65_038037 PE=4 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 5.164e-127
Identity = 174/217 (80.18%), Postives = 194/217 (89.40%), Query Frame = 0
Query:    1 MEKMMRLRSLFRSMSLRSYHAFSSTNHILRSTSLLSPSPNPFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAADWGKVTV 217
            MEKMMRLR LFRS+S RSYHAF   NH++   SL+S SPNP PSPS SEC SPFSMGLGSMRF+SED+TH+PNIKDP LYN FKDL+AV+WSELPDSVVS+VKNVLS+NTDDKAGKE VENVFRAA+A+EEFGGILVSLKLE DDSIG+SGEDVKPLP HIK+AL   FDRYSTYLNSFGPDE+YLRKKVE ELG+ MIHLKMRCSGL A+WGKV++
Sbjct:    1 MEKMMRLRPLFRSLSCRSYHAFPFINHVVLRPSLISRSPNPLPSPSHSECMSPFSMGLGSMRFYSEDLTHVPNIKDPALYNAFKDLMAVSWSELPDSVVSDVKNVLSKNTDDKAGKEAVENVFRAAEAIEEFGGILVSLKLEFDDSIGLSGEDVKPLPDHIKNALCTTFDRYSTYLNSFGPDENYLRKKVETELGAKMIHLKMRCSGLGAEWGKVSL 217          
BLAST of Vum_03G01922.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151S807|A0A151S807_CAJCA (Succinate dehydrogenase subunit 5, mitochondrial OS=Cajanus cajan OX=3821 GN=KK1_027283 PE=4 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 3.316e-126
Identity = 189/232 (81.47%), Postives = 206/232 (88.79%), Query Frame = 0
Query:    1 MEKMMRLRSLFRSMSLRSYHAFSSTNHILRSTSLLSPSPNPFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAADWGKVTVLGTSGLAGSYVEQRA 232
            ME+MMRLRSL RS+S RSYH+F+ST+H     SLLS   NP PS  SSECR PFSMGLG MRF+SEDVTH+PNIKD ELYN FKDL+A +WSELPDSVV  VKN LS+NTDDKAGKEVVENVFRAA+AVEEFGGILVSLKLE+DDSIG+SGEDVKPLP HIK+AL  IFDRYSTYLNSFGPDESYLRKKVE+ELG+ MIHLKMRCSGL A+WGKVTVLGTSGLAGSYVEQRA
Sbjct:    1 MERMMRLRSLIRSLSSRSYHSFASTSHFALRPSLLSRPHNPLPS--SSECRPPFSMGLGRMRFYSEDVTHMPNIKDTELYNAFKDLMAESWSELPDSVVHGVKNALSKNTDDKAGKEVVENVFRAAEAVEEFGGILVSLKLEIDDSIGMSGEDVKPLPDHIKNALRTIFDRYSTYLNSFGPDESYLRKKVEIELGAKMIHLKMRCSGLGAEWGKVTVLGTSGLAGSYVEQRA 230          
BLAST of Vum_03G01922.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SX77|SDH5_ARATH (Succinate dehydrogenase subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH5 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.286e-89
Identity = 125/221 (56.56%), Postives = 167/221 (75.57%), Query Frame = 0
Query:   26 NHILRSTSLLSPSPNP------------FPSPSS--SECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAADWGKVTVLGTSGLAGSYVEQRA 232
             H+ R  +L++ +PN             F S +S   + + P +MG+G +R FSEDV+H+P ++D ++ N FKDL+A +W+ELP +VV + K  +S+NTDDKAG+E ++NVFRAA+AVEEFGGIL S+K+E+DDSIG+SGE VKPLP  I  AL   + RY+ YL+SF P+E YL+KKVE+ELG+ MIHLKMRCSGL ++WGKVTVLGTSGL+GSYVEQRA
Sbjct:   37 KHLSRHRTLITVAPNASVIGDVQINKGSFISYASVSRDLQYPRAMGMGQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYLDSFEPEEVYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSGSYVEQRA 257          
BLAST of Vum_03G01922.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q0JDA2|SDH5_ORYSJ (Succinate dehydrogenase subunit 5, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH5 PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 3.507e-76
Identity = 108/198 (54.55%), Postives = 145/198 (73.23%), Query Frame = 0
Query:   35 LSPSPNPFPSPSSSECRSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVSNVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVSGEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIHLKMRCSGLAADWGKVTVLGTSGLAGSYVEQRA 232
            ++P   P  + + S   + FS  L   R FS +  HLP I DPE+ + FKDL+A +W+ LPDS+V   K   S+ TDDKAGKE + NVFRAA+A EEFGG+LV+L++ LDD  G++GE+V PLP +I+ A+   + RY  YL SFGP+E+YLRKKVE ELG+ MIHLKMRCSG+ ++WGK+T++GTSG++GSYVE RA
Sbjct:   36 VAPLARPIAAAAVSGGNNAFSWNL--RRLFSSNEKHLPAISDPEVESAFKDLMAASWTGLPDSLVIEAKKAASKATDDKAGKEALLNVFRAAEACEEFGGVLVTLRMALDDLCGITGENVGPLPGYIEDAVKSAYKRYMKYLESFGPEENYLRKKVENELGTKMIHLKMRCSGVGSEWGKITLIGTSGISGSYVELRA 231          
The following BLAST results are available for this feature:
BLAST of Vum_03G01922.1 vs. Araport11
Analysis Date: 2024-06-26 (Vigna umbellata FF25 genome v1.0)
Total hits: 1
Match NameE-valueIdentityDescription
|1.344e-9056.56Symbols: SDH5 | succinate dehydrogenase 5 | chr1:1... [more]
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BLAST of Vum_03G01922.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-05 (Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A8T0K106|A0A8T0K106_PHAAN5.024e-16899.57Succinate dehydrogenase subunit 5 OS=Phaseolus ang... [more]
tr|A0A1S3UFJ7|A0A1S3UFJ7_VIGRR2.142e-16698.28Succinate dehydrogenase subunit 5, mitochondrial O... [more]
tr|V7CRT5|V7CRT5_PHAVU6.231e-15491.38Succinate dehydrogenase subunit 5 OS=Phaseolus vul... [more]
tr|A0A4D6MGQ2|A0A4D6MGQ2_VIGUN3.062e-15196.12Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|A0AA86STZ5|A0AA86STZ5_9FABA2.492e-14085.11Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|I1M8K9|I1M8K9_SOYBN5.206e-14082.33Succinate dehydrogenase subunit 5, mitochondrial O... [more]
tr|A0A0B2RTH5|A0A0B2RTH5_GLYSO5.206e-14082.33Succinate dehydrogenase subunit 5, mitochondrial i... [more]
tr|C6T518|C6T518_SOYBN7.460e-13281.53Succinate dehydrogenase subunit 5, mitochondrial O... [more]
tr|A0A445H367|A0A445H367_GLYSO5.164e-12780.18Succinate dehydrogenase subunit 5, mitochondrial i... [more]
tr|A0A151S807|A0A151S807_CAJCA3.316e-12681.47Succinate dehydrogenase subunit 5, mitochondrial O... [more]
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BLAST of Vum_03G01922.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-05 (Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt Swissprot )
Total hits: 2
Match NameE-valueIdentityDescription
sp|Q9SX77|SDH5_ARATH1.286e-8956.56Succinate dehydrogenase subunit 5, mitochondrial O... [more]
sp|Q0JDA2|SDH5_ORYSJ3.507e-7654.55Succinate dehydrogenase subunit 5, mitochondrial O... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna umbellata FF25 genome v1.0
Date Performed: 2024-08-05
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025397Succinate dehydrogenase subunit 5, mitochondrialPFAMPF14290SDH5_plantcoord: 1..232
e-value: 7.0E-101
score: 348.6
IPR025397Succinate dehydrogenase subunit 5, mitochondrialPANTHERPTHR36139SUCCINATE DEHYDROGENASE SUBUNIT 5, MITOCHONDRIALcoord: 1..232

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigUmbe.FF25.1.0.Vum_03G01922.1 ID=drVigUmbe.FF25.1.0.Vum_03G01922.1; Name=Vum_03G01922.1; organism=Vigna umbellata; type=mRNA; length=699bp
ATGGAGAAAATGATGCGACTGAGATCACTGTTCCGATCAATGAGTCTCAG
ATCTTATCACGCTTTTTCTTCCACCAACCATATCCTTCGTTCAACGTCTC
TTCTCTCTCCTTCTCCCAATCCCTTTCCTTCTCCCTCTTCCTCAGAATGC
AGGTCTCCTTTCTCGATGGGTTTAGGGAGCATGCGATTCTTTAGCGAAGA
TGTGACTCACCTGCCCAATATTAAAGACCCTGAACTTTACAATGTTTTCA
AGGATTTGTTGGCTGTAAATTGGAGTGAGCTTCCGGATTCTGTTGTTTCT
AACGTTAAGAATGTGTTGTCTAGAAACACTGATGACAAGGCTGGCAAGGA
GGTTGTGGAGAATGTGTTCCGGGCAGCTCAAGCTGTTGAGGAGTTTGGTG
GGATTCTAGTCAGCTTGAAACTGGAACTTGATGACAGTATTGGAGTGAGT
GGCGAGGATGTAAAGCCATTGCCTACGCATATAAAAAGTGCTCTTAATCT
CATTTTTGATCGTTACTCCACCTATTTGAATTCCTTTGGACCGGACGAGA
GTTATCTGCGGAAAAAGGTGGAGGTAGAGTTGGGCTCAAGCATGATTCAC
TTAAAGATGAGATGCAGTGGCCTTGCTGCTGACTGGGGAAAGGTTACTGT
TCTTGGAACTTCTGGACTTGCGGGTTCATATGTTGAGCAAAGAGCTTAG
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protein sequence of drVigUmbe.FF25.1.0.Vum_03G01922.1

>drVigUmbe.FF25.1.0.Vum_03G01922.1 ID=drVigUmbe.FF25.1.0.Vum_03G01922.1; Name=drVigUmbe.FF25.1.0.Vum_03G01922.1; organism=Vigna umbellata; type=polypeptide; length=232bp
MEKMMRLRSLFRSMSLRSYHAFSSTNHILRSTSLLSPSPNPFPSPSSSEC
RSPFSMGLGSMRFFSEDVTHLPNIKDPELYNVFKDLLAVNWSELPDSVVS
NVKNVLSRNTDDKAGKEVVENVFRAAQAVEEFGGILVSLKLELDDSIGVS
GEDVKPLPTHIKSALNLIFDRYSTYLNSFGPDESYLRKKVEVELGSSMIH
LKMRCSGLAADWGKVTVLGTSGLAGSYVEQRA
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mRNA from alignment at Chr3:38313220..38315539-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigUmbe.FF25.1.0.Vum_03G01922.1 ID=drVigUmbe.FF25.1.0.Vum_03G01922.1; Name=Vum_03G01922.1; organism=Vigna umbellata; type=mRNA; length=2320bp; location=Sequence derived from: Chr3:38313220..38315539- (Vigna umbellata
ATGGAGAAAATGATGCGACTGAGATCACTGTTCCGATCAATGAGTCTCAG ATCTTATCACGCTTTTTCTTCCACCAACCATATCCTTCGTTCAACGTCTC TTCTCTCTCCTTCTCCCAATCCCTTTCCTTCTCCCTCTTCCTCAGGTACT TTTTCTCTCCTACCGTTTCCTCTTCTATATTCTGTTAGGTTTTCCTTCCG CATCGCTTTTCTCACTAATCCGACGTCGTTCGCACTTTATCACGCACAAT TGGATCGGGTTTTTATTAAATTGAATTAATCTGATTCAATTTCAATGTAC TGGTAGATGAAGCTTATACGGACAATAAGCTAGTGTAATAGTGTTCGTCT TCCGTTTATTGCGACTGGAATATTATGTGTCCGTGATTTTCGATACTTCG ATTCGTATCTGACTCCACAATTGGATCAATTCGTTGTTATAGTACCGGCT TTGTATCCTGGTTAAAATATTGGCAATGATTTTCGTTTTGCTAGTGCCAC CGTTTTCTTTTCATGATGAAATTGGTTATTCAGATCACAGCTTCATTAAA GAAAACAAAATGTTGTATCTGGTTCACTCTTTGACGTTTTTTTTGAGACT TTGGTTTGTTTGGTGAACCTCTCATTTAGAAGATGCTGGAAAAGAAAATA AGAAGAGAAAATGAACTGGTTAAGTTTCTCTTATGGGTTTAAATTGGTTT TGCATAAGATAAATCAAATTTTGGAGAAACTGAATGAGAATATGTTGTAA ATTAGACTGTGCATAAATTAGTTTTAAACTGATGAGAGAAGATCAGTTTA TTTTGTCTTGTTATTTTATTCTTCTGTAAATTTATGGAAATAGAATTTTT GTTGATTGAGTTAGAGCGTTATGTTTGAGGATGGCTGTTGTATGCTGAAT TGGTTTTGCTTGGAAAAACATACACAGAATGCAGGTCTCCTTTCTCGATG GGTTTAGGGAGCATGCGATTCTTTAGCGAAGATGTGACTCACCTGCCCAA TATTAAAGACCCTGAACTTTACAATGTTTTCAAGGATTTGTTGGCTGTAA ATTGGAGTGAGCTTCCGGATTCTGTTGTTTCTAACGTTAAGAATGTGTTG TCTAGAAACACTGATGACAAGGCTGGCAAGGAGGTTGTGGAGAATGTGTT CCGGGCAGCTCAAGCTGTTGAGGAGTTTGGTGGGATTCTAGTCAGCTTGA AACTGGAACTTGATGACAGTATTGGAGTGAGTGGCGAGGTATTTCTCGTT TAAACTTGTACCTGTAAAAAGTTGCACTATTGCATTCTATTTAAATTTAC CCATCACATTTGGCTGCTGATGATTGGATTTCTTTTTGCAGGATGTAAAG CCATTGCCTACGCATATAAAAAGTGCTCTTAATCTCATTTTTGATCGTTA CTCCACCTATTTGAATTCCTTTGGACCGGACGAGAGTTATCTGCGGAAAA AGGTGGAGGTAGAGTTGGGCTCAAGCATGATTCACTTAAAGATGAGATGC AGTGGCCTTGCTGCTGACTGGGGAAAGGTATCATCTTACATTTTCACTTG TTATTGCCTATTTATGTAGTAGTTTGTGCATGGTAGCCAATGGGATTTGC ACTGCTTCTCTCTTTTTTTCTCACATGACCTGCGCATAAAATTGTATTTC CATTCATTGAATGAGGAATATGAGGTGAGATATACTCAAAATCTGCCACT TTCATGATAATTGGCATCTGTCATTTCCTGTGACCGACACCATGGCACTG TCATTTGAAGATGCTAACACCATTGGAATTTTATGACGAGGGATCCCCAA AACCATCGTGGTAGAAAAACTCTGATTTACAGTTTTTGTGTGCACTTGCA AGTTGCAACATAGTTTAGTTCTTTAGATTTTTTAAAATGTGTTGTCAAAT GTTGTTGTTCTTGTTTGCTGGAATGTTATTTTAACTTTTTGCATCTGTTT TCTTAAATTCCTCCATGCTTTTTTTACTCGGTAGTATATCCTATATGGTT ATTAGTAAGAAAAATGTAAGTAGCATGGACATGCCTTCAGAAAATAACTA AAAAAGAAGAAAAAATGTTAGGAAATTTGTTGTGATCAGTCAATTGTGTT TTTTTTTTCAACTTTGCTTCTTTTTATCTCTTTCCCGCCGTGACCGGTTA GTACTTTTAGCATTCGCGGTAGTCTTTGTTCAATTACTTCCATGGCAAAT AGCTACATTCAAAATTGCAGACCTATTCCCATTCCCTTATCTAATCTGAG CTTACTGTTGCAGGTTACTGTTCTTGGAACTTCTGGACTTGCGGGTTCAT ATGTTGAGCAAAGAGCTTAG
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Coding sequence (CDS) from alignment at Chr3:38313220..38315539-

>drVigUmbe.FF25.1.0.Vum_03G01922.1 ID=drVigUmbe.FF25.1.0.Vum_03G01922.1; Name=Vum_03G01922.1; organism=Vigna umbellata; type=CDS; length=699bp; location=Sequence derived from: Chr3:38313220..38315539- (Vigna umbellata
ATGGAGAAAATGATGCGACTGAGATCACTGTTCCGATCAATGAGTCTCAG
ATCTTATCACGCTTTTTCTTCCACCAACCATATCCTTCGTTCAACGTCTC
TTCTCTCTCCTTCTCCCAATCCCTTTCCTTCTCCCTCTTCCTCAGAATGC
AGGTCTCCTTTCTCGATGGGTTTAGGGAGCATGCGATTCTTTAGCGAAGA
TGTGACTCACCTGCCCAATATTAAAGACCCTGAACTTTACAATGTTTTCA
AGGATTTGTTGGCTGTAAATTGGAGTGAGCTTCCGGATTCTGTTGTTTCT
AACGTTAAGAATGTGTTGTCTAGAAACACTGATGACAAGGCTGGCAAGGA
GGTTGTGGAGAATGTGTTCCGGGCAGCTCAAGCTGTTGAGGAGTTTGGTG
GGATTCTAGTCAGCTTGAAACTGGAACTTGATGACAGTATTGGAGTGAGT
GGCGAGGATGTAAAGCCATTGCCTACGCATATAAAAAGTGCTCTTAATCT
CATTTTTGATCGTTACTCCACCTATTTGAATTCCTTTGGACCGGACGAGA
GTTATCTGCGGAAAAAGGTGGAGGTAGAGTTGGGCTCAAGCATGATTCAC
TTAAAGATGAGATGCAGTGGCCTTGCTGCTGACTGGGGAAAGGTTACTGT
TCTTGGAACTTCTGGACTTGCGGGTTCATATGTTGAGCAAAGAGCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR025397SDH5
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
Vocabulary: Cellular Component
TermDefinition
GO:0045273respiratory chain complex II (succinate dehydrogenase)