Vum_11G00734.1

Transcript Overview
NameVum_11G00734.1
Unique NamedrVigUmbe.FF25.1.0.Vum_11G00734.1
TypemRNA
OrganismVigna umbellata ()
Sequence length297
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr11chromosomeChr11:14283865..14285050 -Vigna umbellata FF25 genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna umbellata FF25 genome v1.02024-06-26
InterProScan Analysis for Vigna umbellata FF25 genome v1.0 2024-08-05
Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt TrEMBL2024-08-05
Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt Swissprot 2024-08-05
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vum_11G00734drVigUmbe.FF25.1.0.Vum_11G00734Vigna umbellatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.Vum_11G00734.1.exon2drVigUmbe.FF25.1.0.Vum_11G00734.1.exon2Vigna umbellataexon
drVigUmbe.FF25.1.0.Vum_11G00734.1.exon1drVigUmbe.FF25.1.0.Vum_11G00734.1.exon1Vigna umbellataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.cds.Vum_11G00734.1drVigUmbe.FF25.1.0.cds.Vum_11G00734.1Vigna umbellataCDS
drVigUmbe.FF25.1.0.cds.Vum_11G00734.1drVigUmbe.FF25.1.0.cds.Vum_11G00734.1_2Vigna umbellataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.Vum_11G00734.1drVigUmbe.FF25.1.0.Vum_11G00734.1Vigna umbellatapolypeptide
drVigUmbe.FF25.1.0.Vum_11G00734.1drVigUmbe.FF25.1.0.Vum_11G00734.1-proteinVigna umbellatapolypeptide


Homology
[Close]
BLAST of Vum_11G00734.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3T8U0|A0A0S3T8U0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.11G087800 PE=4 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.383e-43
Identity = 88/97 (90.72%), Postives = 90/97 (92.78%), Query Frame = 0 
Query:    1 MDLFVADHFPVPDHVAPFPNFGDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDPIASGSGHTWSQESDSALDAEDEEENDDNSSTNPEENAE 97
            MDLF ADHFPVPDHVAPFP+ GDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPD IAS SGHT SQESDSALDAEDEEENDDNSS +PE NAE
Sbjct:    1 MDLFAADHFPVPDHVAPFPDSGDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDLIASESGHTPSQESDSALDAEDEEENDDNSSASPEGNAE 97
[Close]
BLAST of Vum_11G00734.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RP21|A0A0S3RP21_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G236800 PE=4 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.448e-43
Identity = 88/98 (89.80%), Postives = 91/98 (92.86%), Query Frame = 0 
Query:    1 MDLFVADHFPVPDHVAPFPNFGDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDPIASGSGHTWSQESDSALDAEDEEENDDNSSTNPEENAEV 98
            MDLF ADHFPVPDHVAPFP+ GDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPD IAS SGHT SQESDSALDAEDEEENDDNSS +P+ NAEV
Sbjct:    1 MDLFAADHFPVPDHVAPFPDSGDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDLIASESGHTPSQESDSALDAEDEEENDDNSSASPKGNAEV 98
[Close]
BLAST of Vum_11G00734.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9VM89|A0A0L9VM89_PHAAN (pyruvate decarboxylase OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g206200 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.840e-43
Identity = 88/98 (89.80%), Postives = 91/98 (92.86%), Query Frame = 0 
Query:    1 MDLFVADHFPVPDHVAPFPNFGDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDPIASGSGHTWSQESDSALDAEDEEENDDNSSTNPEENAEV 98
            MDLF ADHFPVPDHVAPFP+ GDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPD IAS SGHT SQESDSALDAEDEEENDDNSS +PE NAE+
Sbjct:    1 MDLFAADHFPVPDHVAPFPDSGDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDLIASESGHTPSQESDSALDAEDEEENDDNSSASPEGNAEI 98
[Close]
BLAST of Vum_11G00734.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9V179|A0A0L9V179_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g241000 PE=4 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.609e-43
Identity = 87/97 (89.69%), Postives = 90/97 (92.78%), Query Frame = 0 
Query:    1 MDLFVADHFPVPDHVAPFPNFGDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDPIASGSGHTWSQESDSALDAEDEEENDDNSSTNPEENAE 97
            MDLF ADHFPVPDHVAPFP+ GDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPD IAS SGHT SQESDSALDAEDEEENDDNSS +P+ NAE
Sbjct:    1 MDLFAADHFPVPDHVAPFPDSGDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDLIASESGHTPSQESDSALDAEDEEENDDNSSASPKGNAE 97
[Close]
BLAST of Vum_11G00734.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3S436|A0A0S3S436_PHAAN (Myb-like domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G095200 PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.286e-42
Identity = 87/96 (90.62%), Postives = 89/96 (92.71%), Query Frame = 0 
Query:    1 MDLFVADHFPVPDHVAPFPNFGDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDPIASGSGHTWSQESDSALDAEDEEENDDNSSTNPEENA 96
            MDLF ADHFPVPDHVAPFP+ GDLLFPADLLSH HNPQKLRPIRSLPSALNAHPRPPDPIASGSGHT SQESDSALDAEDEEENDDNSS +PE N 
Sbjct:    1 MDLFAADHFPVPDHVAPFPDSGDLLFPADLLSHCHNPQKLRPIRSLPSALNAHPRPPDPIASGSGHTPSQESDSALDAEDEEENDDNSSASPEGNG 96
[Close]
BLAST of Vum_11G00734.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9VF92|A0A0L9VF92_PHAAN (Trihelix transcription factor GTL1 GT2-LIKE protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0070170 PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.286e-42
Identity = 87/96 (90.62%), Postives = 89/96 (92.71%), Query Frame = 0 
Query:    1 MDLFVADHFPVPDHVAPFPNFGDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDPIASGSGHTWSQESDSALDAEDEEENDDNSSTNPEENA 96
            MDLF ADHFPVPDHVAPFP+ GDLLFPADLLSH HNPQKLRPIRSLPSALNAHPRPPDPIASGSGHT SQESDSALDAEDEEENDDNSS +PE N 
Sbjct:    1 MDLFAADHFPVPDHVAPFPDSGDLLFPADLLSHCHNPQKLRPIRSLPSALNAHPRPPDPIASGSGHTPSQESDSALDAEDEEENDDNSSASPEGNG 96
[Close]
BLAST of Vum_11G00734.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KIN7|A0A4D6KIN7_VIGUN (Myb-like domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g870 PE=4 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.498e-42
Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 0 
Query:    1 MDLFVADHFPVPDHVAPFPNFGDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDPIASGSGHTWSQESDSALDAEDEEENDDNSSTNPEENA 96
            MDLF ADHFPVPDHVAPFP+ GDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDP ASGSGH  SQESDSALDAEDEEEND+NSST+ E N 
Sbjct:    1 MDLFAADHFPVPDHVAPFPDSGDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDPTASGSGHAPSQESDSALDAEDEEENDENSSTSTEGNG 96
[Close]
BLAST of Vum_11G00734.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7BNQ3|V7BNQ3_PHAVU (Myb-like domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G139200g PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.218e-41
Identity = 80/96 (83.33%), Postives = 86/96 (89.58%), Query Frame = 0 
Query:    1 MDLFVADHFPVPDHVAPFPNFGDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDPIASGSGHTWSQESDSALDAEDEEENDDNSSTNPEENA 96
            MDLF ADHFP+PDHVAPFP+ GDLLFP D LSHRHNPQKLRPIRSLPSALNAHPRPPDPIASGSGHT S ESDSALDAE+E+E+DDNSS + E N 
Sbjct:    1 MDLFAADHFPIPDHVAPFPDSGDLLFPPDPLSHRHNPQKLRPIRSLPSALNAHPRPPDPIASGSGHTPSHESDSALDAEEEDEDDDNSSASTEGNG 96
[Close]
BLAST of Vum_11G00734.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VIL0|A0A1S3VIL0_VIGRR (Trihelix transcription factor GT-2 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775436 PE=4 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.558e-41
Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 0 
Query:    1 MDLFVADHFPVPDHVAPFPNFGDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDPIASGSGHTWSQESDSALDAEDEEENDDNSSTNPEENA 96
            MDLF ADHFPVPDHVAPFP+ GDLLFPADLLS+RHNPQKLRPIR LPSALNAHPRPPDPIASGSGH  SQESDSALDAEDEEENDDNSS +PE N 
Sbjct:    1 MDLFAADHFPVPDHVAPFPDSGDLLFPADLLSYRHNPQKLRPIRPLPSALNAHPRPPDPIASGSGHAPSQESDSALDAEDEEENDDNSSASPEGNG 96
[Close]
BLAST of Vum_11G00734.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3TD33|A0A0S3TD33_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.UMG002700 PE=4 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.066e-38
Identity = 85/98 (86.73%), Postives = 88/98 (89.80%), Query Frame = 0 
Query:    1 MDLFVADHFPVPDHVAPFPNFGDLLFPADLLSHRHNPQKLRPIRSLPSALNAHPRPPDPIASGSGHTWSQESDSALDAEDEEENDDNSSTNPEENAEV 98
            MDLF ADHFPVPDHVAPFP+ GDLLFPADLLSH   PQKLRPIRSLPSALNAHPRPPD I+S SGHT SQESDSALDAEDEEENDDNSS +PE NAEV
Sbjct:    1 MDLFAADHFPVPDHVAPFPDSGDLLFPADLLSH---PQKLRPIRSLPSALNAHPRPPDLISSESGHTPSQESDSALDAEDEEENDDNSSASPEGNAEV 95
The following BLAST results are available for this feature:
BLAST of Vum_11G00734.1 vs.
Analysis Date: 2024-06-26 (Vigna umbellata FF25 genome v1.0)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vum_11G00734.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-05 (Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3T8U0|A0A0S3T8U0_PHAAN1.383e-4390.72Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0S3RP21|A0A0S3RP21_PHAAN1.448e-4389.80Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9VM89|A0A0L9VM89_PHAAN1.840e-4389.80pyruvate decarboxylase OS=Phaseolus angularis OX=3... [more]
tr|A0A0L9V179|A0A0L9V179_PHAAN7.609e-4389.69Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A0S3S436|A0A0S3S436_PHAAN1.286e-4290.63Myb-like domain-containing protein OS=Vigna angula... [more]
tr|A0A0L9VF92|A0A0L9VF92_PHAAN1.286e-4290.63Trihelix transcription factor GTL1 GT2-LIKE protei... [more]
tr|A0A4D6KIN7|A0A4D6KIN7_VIGUN1.498e-4288.54Myb-like domain-containing protein OS=Vigna unguic... [more]
tr|V7BNQ3|V7BNQ3_PHAVU1.218e-4183.33Myb-like domain-containing protein OS=Phaseolus vu... [more]
tr|A0A1S3VIL0|A0A1S3VIL0_VIGRR2.558e-4188.54Trihelix transcription factor GT-2 isoform X1 OS=V... [more]
tr|A0A0S3TD33|A0A0S3TD33_PHAAN1.066e-3886.73Uncharacterized protein OS=Vigna angularis var. an... [more]
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BLAST of Vum_11G00734.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-05 (Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt Swissprot )
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigUmbe.FF25.1.0.Vum_11G00734.1 ID=drVigUmbe.FF25.1.0.Vum_11G00734.1; Name=Vum_11G00734.1; organism=Vigna umbellata; type=mRNA; length=297bp
ATGGACCTCTTCGTCGCCGATCACTTCCCCGTCCCCGACCACGTCGCTCC
ATTTCCCAATTTCGGCGACCTTCTATTCCCTGCCGACCTTCTCTCCCACC
GCCACAACCCCCAGAAGCTCCGCCCCATCCGGTCCCTTCCCTCCGCTCTC
AATGCCCACCCTCGTCCGCCCGATCCGATTGCCTCCGGGTCGGGTCACAC
CTGGAGCCAAGAATCTGACTCGGCTTTGGATGCGGAGGATGAAGAGGAGA
ATGATGACAATTCATCAACAAACCCTGAAGAAAATGCGGAGGTTTAA
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protein sequence of drVigUmbe.FF25.1.0.Vum_11G00734.1

>drVigUmbe.FF25.1.0.Vum_11G00734.1 ID=drVigUmbe.FF25.1.0.Vum_11G00734.1; Name=drVigUmbe.FF25.1.0.Vum_11G00734.1; organism=Vigna umbellata; type=polypeptide; length=98bp
MDLFVADHFPVPDHVAPFPNFGDLLFPADLLSHRHNPQKLRPIRSLPSAL
NAHPRPPDPIASGSGHTWSQESDSALDAEDEEENDDNSSTNPEENAEV
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mRNA from alignment at Chr11:14283865..14285050-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigUmbe.FF25.1.0.Vum_11G00734.1 ID=drVigUmbe.FF25.1.0.Vum_11G00734.1; Name=Vum_11G00734.1; organism=Vigna umbellata; type=mRNA; length=1186bp; location=Sequence derived from: Chr11:14283865..14285050- (Vigna umbellata
ATGGACCTCTTCGTCGCCGATCACTTCCCCGTCCCCGACCACGTCGCTCC
ATTTCCCAATTTCGGCGACCTTCTATTCCCTGCCGACCTTCTCTCCCACC
GCCACAACCCCCAGAAGCTCCGCCCCATCCGGTCCCTTCCCTCCGCTCTC
AATGCCCACCCTCGTCCGCCCGATCCGATTGCCTCCGGGTCGGGTCACAC
CTGGAGCCAAGAATCTGAGTGAGTCCATTTCTCTTCTCCCATCTCCACCT
CTGCTTTTCTCCTTTTTTTTATCTAATCAATTATTAAAAGATCCCCTTTT
CTCTCTTTCGTTATTTTTAATTATTAATTCGATTTGAATTTGTGTGTCTT
TATCTTTTATTTTTATGCTTATATTATACCCTGTCTTTGCTGAATGGGGA
CGTAACGTACAACCAATCAAGTGATTTCCTTTTCTATTATTTTAGTTAAT
TGAAAAAAGATTGTGATTGGCGGTGGTTGCAGAGTGTGTTACTTTTTTTA
CGAGTGTTTGCGATGAGGTGTTAGGCACGAACTTGTTCTTAGAATATGTT
GCATTGCAGTGTTGTCCATTTGATGCTATGAGCTCTGTGTTGCGTCTTTA
CGAGAGAGAAAGAGACTGAGCCCACAACTTGGTACTAGTATACATCATTC
TTTTCTGATTCGAGAATGCTTTGGTTTGTAGCAGTGTGCTTTTGGTGGAT
GAAAAGAAATGCATTGTACGGTGTATTATTATTTTTATAGTTGGGTTAAG
AGTTATGTTATATCTGCACACAAGTATTTGTATTATATAGAATGTTCTGT
GTGGTAATTGAAAAACAAGGTCTTGTTGGAATGAAACCATTTTCCCGAAT
GATTTAGCAACCCCAACTATTGATAATTTGTTACCGTTTATTTACTAACG
CGAGGTGAGTCTGGTGAAAGGGTTAATCTCTTGTTACATGAAAAATCAAG
GTTCAGAATTTTACCAAAAGAGGTGTGTTTCATTTAGTACCCGAGAGTGT
TTCGAACAAGATTCACTCTGACACATGTGTGAAATCAAAACAGTCTTTCT
TGACAGGTTTAAGATTGGTTTGGACTGCTCTTTTTTATTTGTTCTTCCTT
GTTTCAGCTCGGCTTTGGATGCGGAGGATGAAGAGGAGAATGATGACAAT
TCATCAACAAACCCTGAAGAAAATGCGGAGGTTTAA
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Coding sequence (CDS) from alignment at Chr11:14283865..14285050-

>drVigUmbe.FF25.1.0.Vum_11G00734.1 ID=drVigUmbe.FF25.1.0.Vum_11G00734.1; Name=Vum_11G00734.1; organism=Vigna umbellata; type=CDS; length=297bp; location=Sequence derived from: Chr11:14283865..14285050- (Vigna umbellata
ATGGACCTCTTCGTCGCCGATCACTTCCCCGTCCCCGACCACGTCGCTCC
ATTTCCCAATTTCGGCGACCTTCTATTCCCTGCCGACCTTCTCTCCCACC
GCCACAACCCCCAGAAGCTCCGCCCCATCCGGTCCCTTCCCTCCGCTCTC
AATGCCCACCCTCGTCCGCCCGATCCGATTGCCTCCGGGTCGGGTCACAC
CTGGAGCCAAGAATCTGACTCGGCTTTGGATGCGGAGGATGAAGAGGAGA
ATGATGACAATTCATCAACAAACCCTGAAGAAAATGCGGAGGTTTAA
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